Lsi05G011570 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G011570
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_72
Location	chr05 : 19462240 .. 19465837 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGAAAAGAAAAGAAAAGAAAAAATCGCCTAGGCATAAAATTTAGAACCTAGTTTTCAGCGAGTTCAAGGAATCAAAAGTATCCGTCGGAAAGAAGAAGGAAAAGAACAAAGGCGGAGGGAAGGAAAAAATAATAAATTCTAACGATCCCAGAAATTCAGGAACGAGACAATCAATCAAATTCCGGTCACATTCTTTCTCAAGATCTCCATCTCTCTCTGTGATTCGATCAATTCGATCGTTGCAGTGTGGAGATGCGGTTCTTCAGGAAGATTGCAGGAATTCTAGGGTTTTCCAAGGACGATTCTCACGACGTCAAGAACGAAGATGACGACGTTGATTCCGATAATCATGCTCCCGATCGCGTCCATATGCAGGGCACTGGTCTTCCTCGGAGAGGCTTCAGCGTCCCAGTACAGGTCGCCGTCAATCGCTCCAACCCCGGCCCTATTCTTCTTCCCTCTAGTTCCGGCGATGGTGGAGTTCAGGTCCATTCTATTATCAATTTTTCTCTCTCTTTTAATCTTCGCATGACTGCTGGATTTTGCTTTCCTGCGTCTCATGAATGAATTTGGCAATTTCTTCTCTATCTATGGCGAGTTTAATGGTCGAAGTGAGTGAGATTTGTTTCCATAGTTCAAACCCGTCAGTTTCGTCGGAATTTTAGTGTTGTCATTTTGTTGGGGATTTAAATTATGTTTTCTTCTGAAAATGGGTTCGTGCTTTTGTTTATGTGAGCTCAGGATGTCTGCAGACCATAAATTTGTTCGAATTTGGTTTCTTTTGGCATTTATGAATTGTTGCTAACACAAACTTGTTATACAGTAAATGCTTATCAACCGTATTTAATCTTTATCACTTTTCTTATTGTTTCAACGATTCAACTTATCCCTATCCAATATAAATTAGAAGACGAGGAAATAATGGTCGTCTAGTCAATATCTTTCCGCAGGGAGGATGGCAAACAATTAAAGTCATTTAAGTTGATGATTTCAGCTGTTAAGAGCTTCTTTTTGATATATTATTGTCTTGATAATGATTAATGAAGGTTATGGATATGAATTATATTTGAGTAATTAGATATGATCAATCAATGCGTTGTTTGTATGAATGCAATGCTGATAAGATGCAAAAGAACCAGCAAAGGGGAACAAAAATTGAACAGGGAAGCAATGAACTTAAGCAAATAATTTCAGTTTCCATTTTATTGATTCTTATTTCGTATGATAGTGTCAGTTTGAAGGACTTTATTAAAGATAAACAACAAATCCTACTCCGACTGTCTACAAGGGCCTCTGTGACTATGAAACCCACTAATTCTGTGTTTCCACGAATTACTTGTTATCATTCTCAAGCCCTAATTCACTCACCACAAAGTAATCCTTCTCTTCCTCACTACCAAATAATAGCTAATTTTCTTAACCATCTCCCTANTATCCCTATCCAATATAAATTAGAAGACGAGGAAATAATGGTCGTCTAGTCAATATCTTTCCGCAGGGAGGATGGCAAACAATTAAAGTCATTTAAGTTGATGATTTCAGCTGTTAAGAGCTTCTTTTGATATATTATTGTCTTGATAATGATTAATGAAGGTTATGGATATGAATTATATTTGAGTAATTAGATATGATCAATCAATGCGTTGTTTGTATGAATGCAATGCTGATAAGATGCAAAAGAACCAGCAAAGGGGAACAAAAATTGAACAGGGAAGCAATGAACTTAAGCAAATAATTTCAGTTTCCATTTTATTGATTCTTATTTTGTATGATAGTGTCAGTTTGAAGGACTTTATTAAAGATAAACAACAAATCCTACTCCGACTGTCTACAAGGGCCTCTGTGACTATGAAACCCACTAATTCTGTGTTTCCACGAATTACTTGTTATCATTCTCAAGCCCTAATTCACTCACCACAAAGTAATCCTTCTCTTCCTCACTACCTCTAATAATAGCTAATTTTCTTAACCATCTCCCTGGCTAATTACCACTATACCCTTAATAACCCCTTATAAATTTTCCGCGATATCCCCTATCAGTCTCACACAGACTTAAGGTGTAGTCTATTCCTTCTCCACTCACCAGAGTGATTTGTCATTGAAACCGTAGTCCACTCACAGGGGTAAAAGTGTACACTCGCAGGCATAAGAAGGAAGAAAAGAATTAGAGAAATTAGTTATGTGTGGGCCCTAGTGGAATATTTCTGTTGTTATTTCTGTTATATGTTTCTGTTACTGAAGAATTGGCAAATATAAGAGTAGGAAGAAGGGGTAGAGGGGGATATGGGAATTTAGACATTTGTAATTGCTCTCTGTGGAGACAAGGGAGAGATTGGGAAGCTCTTGAATTCTTCCCCCCGTTGTTGATAAATAAAATTCAGGCTAAGCCCTATCAATTTGGTATCAGAGCGGTGTGATCTGGAATGGTGGGAAAGATGGAGGCAAGAGTAATGGAACTGGAAGAGAAAATGACGGGAATGTCAATCAAGGTCTCTGAGCTGGAAGGAAAGTTTGATTCAAGATTTGCAGAAGCGGAAGTGAATCGAGCAAAGGCTGAACAGAGAATGGAAAGGAATTTTGAGAGGTTAATTCAAAAGATGGAGGAATGGGGGAATGGGCCGAAAGGCACAGCAACAACAGAAATATTCCACTAGGGCCCACACATAACTAATTTCTCTAATTCTTTTCTTCCTTCTTATGCCTGCGAGTGTACACTTTTACCCCTGGAGGTCTATCATCTGATTCATCTGTATCATTATATATATGTGTGCAAGGTCCTACACTTCCTGTTTTCAGATGGGTGAGTTTCTCCTTTGAGAATTTTGCCAATTTAGGAAGTAATGAGAGATCTCATTTTAATGAGACCTCAACTTGTCTTCGTTTTGCTAGTATGAATTGCACTCTCTTCATGATGGGTGGGTGATCTCAAGTCATTACATGGTTTCTAATATTTGCAAGTTTTCCTTTCATTGTACACATTAAATGTTACTAGCACTTGTTACTGGTGCAAGTATTGTGATGCTTTTTGTCATTTGCAAGATTGAAACGATGGCGTGTTTGTTAATTTTTGGAATATTTCATATATTCAGGGTTTGACATGGTATGCAAAGCGTCTTCGAGTTGATGAAGATGGAGATGTAGCTGAACAGTTCCTGGAGGAGGTCATACCTGAGGTTCAAACCAGTACTACAGACCATCCGAAGCCATTTCCACGATTTCAGATAAATAATAGAAATAGACCAGCTAAAGTAGAGAACCAAGTTATATTGCAGGAAGGTAAACTTCAACAATGTATTAAACATCAAGGTAGATTGTTATTGGTATGAAGAAGACAAAAAAGCCTGAGAAATGATCCCTTCACTTCAGCCAATGGTGTTCAGGTTCAATTTTTTTAGTTTATTTGCACATGGTGGTCAATTTATGAGGATGATCTGTCTCATTTTGATGACAAACAAAAGAAAAACTTGGCTTACAGTACAGAAGTTTGCATCAACTGTATTAAGGGGGTCTAGTTTGTACTGCTCTGATCATTTGAACATATGTTGTGAACGCCCTACAGGTGGAGATAAAGAGGAATACAGAAATGGGCACTAA

mRNA sequence

AAAAAGAAAAGAAAAGAAAAGAAAAAATCGCCTAGGCATAAAATTTAGAACCTAGTTTTCAGCGAGTTCAAGGAATCAAAAGTATCCGTCGGAAAGAAGAAGGAAAAGAACAAAGGCGGAGGGAAGGAAAAAATAATAAATTCTAACGATCCCAGAAATTCAGGAACGAGACAATCAATCAAATTCCGGTCACATTCTTTCTCAAGATCTCCATCTCTCTCTGTGATTCGATCAATTCGATCGTTGCAGTGTGGAGATGCGGTTCTTCAGGAAGATTGCAGGAATTCTAGGGTTTTCCAAGGACGATTCTCACGACGTCAAGAACGAAGATGACGACGTTGATTCCGATAATCATGCTCCCGATCGCGTCCATATGCAGGGCACTGGTCTTCCTCGGAGAGGCTTCAGCGTCCCAGTACAGGTCGCCGTCAATCGCTCCAACCCCGGCCCTATTCTTCTTCCCTCTAGTTCCGGCGATGGTGGAGTTCAGGGTTTGACATGGTATGCAAAGCGTCTTCGAGTTGATGAAGATGGAGATGTAGCTGAACAGTTCCTGGAGGAGGTCATACCTGAGGTTCAAACCAGTACTACAGACCATCCGAAGCCATTTCCACGATTTCAGATAAATAATAGAAATAGACCAGCTAAAGTAGAGAACCAAGTTATATTGCAGGAAGTACAGAAGTTTGCATCAACTGTATTAAGGGGGTCTAGTTTGTACTGCTCTGATCATTTGAACATATGTTGTGAACGCCCTACAGGTGGAGATAAAGAGGAATACAGAAATGGGCACTAA

Coding sequence (CDS)

ATGCGGTTCTTCAGGAAGATTGCAGGAATTCTAGGGTTTTCCAAGGACGATTCTCACGACGTCAAGAACGAAGATGACGACGTTGATTCCGATAATCATGCTCCCGATCGCGTCCATATGCAGGGCACTGGTCTTCCTCGGAGAGGCTTCAGCGTCCCAGTACAGGTCGCCGTCAATCGCTCCAACCCCGGCCCTATTCTTCTTCCCTCTAGTTCCGGCGATGGTGGAGTTCAGGGTTTGACATGGTATGCAAAGCGTCTTCGAGTTGATGAAGATGGAGATGTAGCTGAACAGTTCCTGGAGGAGGTCATACCTGAGGTTCAAACCAGTACTACAGACCATCCGAAGCCATTTCCACGATTTCAGATAAATAATAGAAATAGACCAGCTAAAGTAGAGAACCAAGTTATATTGCAGGAAGTACAGAAGTTTGCATCAACTGTATTAAGGGGGTCTAGTTTGTACTGCTCTGATCATTTGAACATATGTTGTGAACGCCCTACAGGTGGAGATAAAGAGGAATACAGAAATGGGCACTAA

Protein sequence

MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDNHAPDRVHMQGTGLPRRGFSVPVQVAVNRSNPGPILLPSSSGDGGVQGLTWYAKRLRVDEDGDVAEQFLEEVIPEVQTSTTDHPKPFPRFQINNRNRPAKVENQVILQEVQKFASTVLRGSSLYCSDHLNICCERPTGGDKEEYRNGH

Homology

[Close]

BLAST of Lsi05G011570 vs. TrEMBL
Match: A0A0A0LF42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G902940 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.2e-69
Identity = 132/140 (94.29%), Postives = 135/140 (96.43%), Query Frame = 1


Query: 1   MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDNHAPDRVHMQGTGLPRRGFSVPVQVAVNR 60
           MRFFRKIAGILGFSKDDSHDVKNEDDDVDSD H PDRVHMQ TGLPRRGF VPVQVAVNR
Sbjct: 1   MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDTHPPDRVHMQATGLPRRGFGVPVQVAVNR 60

Query: 61  SNPGPILLPSSSGDGGVQGLTWYAKRLRVDEDGDVAEQFLEEVIPEVQTSTTDHPKPFPR 120
           SNPGPILLPSSSGDGGVQGLTWYAK LR+DEDGDVAEQFLEEVIPEVQTSTT+HPKPFPR
Sbjct: 61  SNPGPILLPSSSGDGGVQGLTWYAKGLRIDEDGDVAEQFLEEVIPEVQTSTTNHPKPFPR 120

Query: 121 FQINNRNRPAKVENQVILQE 141
           FQINNRNRPAKVENQVIL+E
Sbjct: 121 FQINNRNRPAKVENQVILKE 140

[Close]

BLAST of Lsi05G011570 vs. TrEMBL
Match: W9RN67_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023280 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.2e-45
Identity = 96/149 (64.43%), Postives = 115/149 (77.18%), Query Frame = 1


Query: 1   MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDNHAPD---------RVHMQGTGLPRRGFS 60
           M FFR+IAG LGF+KDD H+VK+EDDD    +H  D         RVHM+ TGLPR+GFS
Sbjct: 1   MGFFRRIAGFLGFAKDDGHEVKDEDDDDHHHHHHEDGNTASQPRNRVHMKETGLPRKGFS 60

Query: 61  VPVQVAVNRSNPGPILLPSSSGDGGVQGLTWYAKRLRVDEDGDVAEQFLEEVIPEVQTST 120
           VPVQVAV+RS+PGP+L P +SGDGG+QGL WYAKRLRVDEDGDVA++F +EV  E  TST
Sbjct: 61  VPVQVAVDRSHPGPLLAPCNSGDGGLQGLRWYAKRLRVDEDGDVADEFYDEVALETATST 120

Query: 121 TDHPKPFPRFQINNRNRPAKVENQVILQE 141
            +  KPFPRFQ+  R RPAKV+ QVILQ+
Sbjct: 121 ENERKPFPRFQVKYRTRPAKVKKQVILQD 149

[Close]

BLAST of Lsi05G011570 vs. TrEMBL
Match: A0A061GAG1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_015734 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.0e-40
Identity = 87/144 (60.42%), Postives = 111/144 (77.08%), Query Frame = 1


Query: 1   MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDNH-----APDRVHMQGTGLPRRGFSVPVQ 60
           MRFFR+IAG+LGF +DD H+VK E+D  +S+N+       +R   Q TGLPRRGFSVPVQ
Sbjct: 1   MRFFRRIAGLLGFVRDDGHEVKEENDHHNSNNNNNNQPPSNRPVFQETGLPRRGFSVPVQ 60

Query: 61  VAVNRSNPGPILLPSSSGDGGVQGLTWYAKRLRVDEDGDVAEQFLEEVIPEVQT--STTD 120
           VAV+R  PGP+LLP +SGDGGVQGL WYAKRLR+DEDGDVA++FL+EV+PE  +  S  +
Sbjct: 61  VAVDRPQPGPLLLPCTSGDGGVQGLKWYAKRLRIDEDGDVADEFLDEVLPETSSAASAEN 120

Query: 121 HPKPFPRFQINNRNRPAKVENQVI 138
             KPFP+F++    RPAKV+ QV+
Sbjct: 121 EQKPFPKFKVKYTTRPAKVKTQVL 144

[Close]

BLAST of Lsi05G011570 vs. TrEMBL
Match: M5WVW0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012773mg PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.5e-38
Identity = 78/137 (56.93%), Postives = 107/137 (78.10%), Query Frame = 1


Query: 1   MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDNHAPDRVHMQGTGLPRRGFSVPVQVAVNR 60
           M F RK+AG+LGF+KDD H+VK+  ++ + DN A +R + Q TGLPR+GFSVPVQVAV+R
Sbjct: 1   MGFLRKMAGMLGFTKDDGHEVKDNGEEDEDDNQAQNRANFQETGLPRKGFSVPVQVAVDR 60

Query: 61  SNPGPILLPSSSGDGGVQGLTWYAKRLRVDEDGDVAEQFLEEVIPEVQTSTTDHPKPFPR 120
           + PGP+L+P  SGDGGVQGL W+AKRLR+DEDGDVA++FL+EV P++  S T++ +   R
Sbjct: 61  NLPGPVLVPCRSGDGGVQGLRWHAKRLRIDEDGDVADEFLDEVFPQMSVS-TENSRALAR 120

Query: 121 FQINNRNRPAKVENQVI 138
           F++    +PAKV  QV+
Sbjct: 121 FEVKYSTKPAKVRTQVL 136

[Close]

BLAST of Lsi05G011570 vs. TrEMBL
Match: A0A067JYP5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19501 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.6e-37
Identity = 81/142 (57.04%), Postives = 109/142 (76.76%), Query Frame = 1


Query: 1   MRFFRKIAGILGFSKDDS-HDVKNED-DDVDSDNHAPDRVHMQG---TGLPRRGFSVPVQ 60
           MRFF++IAG+LGF +D+  H+VK++  +D D D+  P   H      TGLPR+GFSVPVQ
Sbjct: 1   MRFFKRIAGLLGFVRDEGGHEVKDQQQEDNDEDHRNPHNHHHHQHHETGLPRKGFSVPVQ 60

Query: 61  VAVNRSNPGPILLPSSSGDGGVQGLTWYAKRLRVDEDGDVAEQFLEEVIPEVQTSTTDHP 120
           V+V+R   GP+++PSSSGDGGVQGL W+A+RL++DEDGDVA++FLEEV+P   ++  DH 
Sbjct: 61  VSVDRPQLGPLIVPSSSGDGGVQGLRWHARRLKIDEDGDVADEFLEEVLPHTSSTVDDHH 120

Query: 121 KPFPRFQINNRNRPAKVENQVI 138
           KP PRFQ+    RPAK++NQVI
Sbjct: 121 KPLPRFQVKLSARPAKIKNQVI 142

[Close]

BLAST of Lsi05G011570 vs. TAIR10
Match: AT4G17960.1 (AT4G17960.1 unknown protein)

HSP 1 Score: 136.3 bits (342), Expect = 1.8e-32
Identity = 72/140 (51.43%), Postives = 94/140 (67.14%), Query Frame = 1


Query: 1   MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDNHAPDRVHMQGTGLPRRGFSVPVQVAVNR 60
           M FF+K+AG+ GF ++    +KNE+DD+D      ++   + TGLPR+GF VPVQVAV R
Sbjct: 1   MGFFKKLAGVFGFGQEV---LKNEEDDIDVYGDGGNQQRFRETGLPRKGFGVPVQVAVER 60

Query: 61  SNPGPILLPSSSGDGGVQGLTWYAKRLRVDEDGDVAEQFLEEVIPEVQTSTTDHP---KP 120
           S  GP+L P ++GDGG+QGL WY KRLRVDEDGDVA++FLEE   E  T+  D     K 
Sbjct: 61  SQLGPLLQPCANGDGGIQGLRWYTKRLRVDEDGDVADEFLEE--GEKSTNAEDDHNCIKT 120

Query: 121 FPRFQINNRNRPAKVENQVI 138
            PRFQI  + +P KV   V+
Sbjct: 121 MPRFQIKRKTKPVKVRGLVV 135

[Close]

BLAST of Lsi05G011570 vs. TAIR10
Match: AT5G46620.1 (AT5G46620.1 unknown protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-22
Identity = 56/117 (47.86%), Postives = 74/117 (63.25%), Query Frame = 1


Query: 1   MRFFRKIAGILGFSKDDS---HDVKNEDDDVDSDNHA------------PDRVHMQGTGL 60
           M F +K+ GILGF  +D    H    ++D    DN+              ++   + TG 
Sbjct: 1   MGFLKKLTGILGFGHNDGGGGHGAVRDEDGDGGDNNTGTVSGDGDKRREENQTRFRETG- 60

Query: 61  PRRGFSVPVQVAVNRSNPGPILLPSSSGDGGVQGLTWYAKRLRVDEDGDVAEQFLEE 103
           PR+GF VPVQVAV RSNPGPIL P ++ DGGVQGL WY+ RL++DEDGDVA++FLE+
Sbjct: 61  PRKGFGVPVQVAVERSNPGPILQPCAALDGGVQGLRWYSMRLKIDEDGDVADEFLED 116

[Close]

BLAST of Lsi05G011570 vs. NCBI nr
Match: gi|659131989|ref|XP_008465957.1| (PREDICTED: uncharacterized protein LOC103503527 [Cucumis melo])

HSP 1 Score: 276.2 bits (705), Expect = 4.1e-71
Identity = 135/140 (96.43%), Postives = 137/140 (97.86%), Query Frame = 1


Query: 1   MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDNHAPDRVHMQGTGLPRRGFSVPVQVAVNR 60
           MRFFRKIAGILGFSKDDSHDVKNEDDDVDSD HAPDRVHMQ TGLPRRGFSVPVQVAVNR
Sbjct: 1   MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDTHAPDRVHMQATGLPRRGFSVPVQVAVNR 60

Query: 61  SNPGPILLPSSSGDGGVQGLTWYAKRLRVDEDGDVAEQFLEEVIPEVQTSTTDHPKPFPR 120
           SNPGPILLPSSSGDGGVQGLTWYAK LR+DEDGDVAEQFLEEVIPEVQTSTTDHPKPFPR
Sbjct: 61  SNPGPILLPSSSGDGGVQGLTWYAKGLRIDEDGDVAEQFLEEVIPEVQTSTTDHPKPFPR 120

Query: 121 FQINNRNRPAKVENQVILQE 141
           FQINNRNRPAKVENQVIL+E
Sbjct: 121 FQINNRNRPAKVENQVILKE 140

[Close]

BLAST of Lsi05G011570 vs. NCBI nr
Match: gi|449461517|ref|XP_004148488.1| (PREDICTED: uncharacterized protein LOC101221247 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 1.7e-69
Identity = 132/140 (94.29%), Postives = 135/140 (96.43%), Query Frame = 1


Query: 1   MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDNHAPDRVHMQGTGLPRRGFSVPVQVAVNR 60
           MRFFRKIAGILGFSKDDSHDVKNEDDDVDSD H PDRVHMQ TGLPRRGF VPVQVAVNR
Sbjct: 1   MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDTHPPDRVHMQATGLPRRGFGVPVQVAVNR 60

Query: 61  SNPGPILLPSSSGDGGVQGLTWYAKRLRVDEDGDVAEQFLEEVIPEVQTSTTDHPKPFPR 120
           SNPGPILLPSSSGDGGVQGLTWYAK LR+DEDGDVAEQFLEEVIPEVQTSTT+HPKPFPR
Sbjct: 61  SNPGPILLPSSSGDGGVQGLTWYAKGLRIDEDGDVAEQFLEEVIPEVQTSTTNHPKPFPR 120

Query: 121 FQINNRNRPAKVENQVILQE 141
           FQINNRNRPAKVENQVIL+E
Sbjct: 121 FQINNRNRPAKVENQVILKE 140

[Close]

BLAST of Lsi05G011570 vs. NCBI nr
Match: gi|703129293|ref|XP_010104329.1| (hypothetical protein L484_023280 [Morus notabilis])

HSP 1 Score: 191.0 bits (484), Expect = 1.7e-45
Identity = 96/149 (64.43%), Postives = 115/149 (77.18%), Query Frame = 1


Query: 1   MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDNHAPD---------RVHMQGTGLPRRGFS 60
           M FFR+IAG LGF+KDD H+VK+EDDD    +H  D         RVHM+ TGLPR+GFS
Sbjct: 1   MGFFRRIAGFLGFAKDDGHEVKDEDDDDHHHHHHEDGNTASQPRNRVHMKETGLPRKGFS 60

Query: 61  VPVQVAVNRSNPGPILLPSSSGDGGVQGLTWYAKRLRVDEDGDVAEQFLEEVIPEVQTST 120
           VPVQVAV+RS+PGP+L P +SGDGG+QGL WYAKRLRVDEDGDVA++F +EV  E  TST
Sbjct: 61  VPVQVAVDRSHPGPLLAPCNSGDGGLQGLRWYAKRLRVDEDGDVADEFYDEVALETATST 120

Query: 121 TDHPKPFPRFQINNRNRPAKVENQVILQE 141
            +  KPFPRFQ+  R RPAKV+ QVILQ+
Sbjct: 121 ENERKPFPRFQVKYRTRPAKVKKQVILQD 149

[Close]

BLAST of Lsi05G011570 vs. NCBI nr
Match: gi|590675723|ref|XP_007039528.1| (Uncharacterized protein TCM_015734 [Theobroma cacao])

HSP 1 Score: 173.7 bits (439), Expect = 2.9e-40
Identity = 87/144 (60.42%), Postives = 111/144 (77.08%), Query Frame = 1


Query: 1   MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDNH-----APDRVHMQGTGLPRRGFSVPVQ 60
           MRFFR+IAG+LGF +DD H+VK E+D  +S+N+       +R   Q TGLPRRGFSVPVQ
Sbjct: 1   MRFFRRIAGLLGFVRDDGHEVKEENDHHNSNNNNNNQPPSNRPVFQETGLPRRGFSVPVQ 60

Query: 61  VAVNRSNPGPILLPSSSGDGGVQGLTWYAKRLRVDEDGDVAEQFLEEVIPEVQT--STTD 120
           VAV+R  PGP+LLP +SGDGGVQGL WYAKRLR+DEDGDVA++FL+EV+PE  +  S  +
Sbjct: 61  VAVDRPQPGPLLLPCTSGDGGVQGLKWYAKRLRIDEDGDVADEFLDEVLPETSSAASAEN 120

Query: 121 HPKPFPRFQINNRNRPAKVENQVI 138
             KPFP+F++    RPAKV+ QV+
Sbjct: 121 EQKPFPKFKVKYTTRPAKVKTQVL 144

[Close]

BLAST of Lsi05G011570 vs. NCBI nr
Match: gi|694408619|ref|XP_009378983.1| (PREDICTED: uncharacterized protein LOC103967452 [Pyrus x bretschneideri])

HSP 1 Score: 169.1 bits (427), Expect = 7.1e-39
Identity = 78/137 (56.93%), Postives = 108/137 (78.83%), Query Frame = 1


Query: 1   MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDNHAPDRVHMQGTGLPRRGFSVPVQVAVNR 60
           M  F++I G+LGF+KDD H+ K+ D++ D+DNHA +R H Q TGLP +GFSVPVQVAV+R
Sbjct: 1   MGLFKRIVGLLGFAKDDGHEGKDNDEEEDNDNHAQNRDHFQETGLPLKGFSVPVQVAVDR 60

Query: 61  SNPGPILLPSSSGDGGVQGLTWYAKRLRVDEDGDVAEQFLEEVIPEVQTSTTDHPKPFPR 120
           + PGP+L+P  SGDGGVQGL W+AKRLR+DEDGDVA++FL+EV P +  ST ++ +  PR
Sbjct: 61  NLPGPVLVPCRSGDGGVQGLRWHAKRLRIDEDGDVADEFLDEVFPGMSISTENN-RALPR 120

Query: 121 FQINNRNRPAKVENQVI 138
           F++ +  +PAKV+ Q +
Sbjct: 121 FEVKHNTKPAKVKTQAL 136

The following BLAST results are available for this feature:

BLAST of Lsi05G011570 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G011570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF42_CUCSA	1.2e-69	94.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G902940 PE=4 SV=1	[more]
W9RN67_9ROSA	1.2e-45	64.43	Uncharacterized protein OS=Morus notabilis GN=L484_023280 PE=4 SV=1	[more]
A0A061GAG1_THECC	2.0e-40	60.42	Uncharacterized protein OS=Theobroma cacao GN=TCM_015734 PE=4 SV=1	[more]
M5WVW0_PRUPE	5.5e-38	56.93	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012773mg PE=4 SV=1	[more]
A0A067JYP5_JATCU	1.6e-37	57.04	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19501 PE=4 SV=1	[more]

BLAST of Lsi05G011570 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17960.1	1.8e-32	51.43	unknown protein	[more]
AT5G46620.1	1.7e-22	47.86	unknown protein	[more]

BLAST of Lsi05G011570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131989\|ref\|XP_008465957.1\|	4.1e-71	96.43	PREDICTED: uncharacterized protein LOC103503527 [Cucumis melo]	[more]
gi\|449461517\|ref\|XP_004148488.1\|	1.7e-69	94.29	PREDICTED: uncharacterized protein LOC101221247 [Cucumis sativus]	[more]
gi\|703129293\|ref\|XP_010104329.1\|	1.7e-45	64.43	hypothetical protein L484_023280 [Morus notabilis]	[more]
gi\|590675723\|ref\|XP_007039528.1\|	2.9e-40	60.42	Uncharacterized protein TCM_015734 [Theobroma cacao]	[more]
gi\|694408619\|ref\|XP_009378983.1\|	7.1e-39	56.93	PREDICTED: uncharacterized protein LOC103967452 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G011570.1	Lsi05G011570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35750	FAMILY NOT NAMED	coord: 1..139 score: 2.4
None	No IPR available	PANTHER	PTHR35750:SF1	SUBFAMILY NOT NAMED	coord: 1..139 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G011570	Csa3G902940	Cucumber (Chinese Long) v2	culsiB201
Lsi05G011570	CSPI03G46860	Wild cucumber (PI 183967)	cpilsiB200
Lsi05G011570	Cucsa.313290	Cucumber (Gy14) v1	cgylsiB504
Lsi05G011570	CmoCh19G004780	Cucurbita moschata (Rifu)	cmolsiB477
Lsi05G011570	Cla016177	Watermelon (97103) v1	lsiwmB344
Lsi05G011570	MELO3C003396	Melon (DHL92) v3.5.1	lsimeB357
Lsi05G011570	ClCG09G012070	Watermelon (Charleston Gray)	lsiwcgB311
Lsi05G011570	MELO3C003396.2	Melon (DHL92) v3.6.1	lsimedB371
Lsi05G011570	Cla97C09G174960	Watermelon (97103) v2	lsiwmbB349
Lsi05G011570	Bhi05G000368	Wax gourd	lsiwgoB464
Lsi05G011570	Cp4.1LG05g02160	Cucurbita pepo (Zucchini)	cpelsiB620
Lsi05G011570	Cp4.1LG15g03540	Cucurbita pepo (Zucchini)	cpelsiB213
Lsi05G011570	Carg08830	Silver-seed gourd	carlsiB719
Lsi05G011570	Carg22826	Silver-seed gourd	carlsiB264
Lsi05G011570	CsaV3_3G049300	Cucumber (Chinese Long) v3	cuclsiB222

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G011570	Cucurbita maxima (Rimu)	cmalsiB492
Lsi05G011570	Cucurbita moschata (Rifu)	cmolsiB568
Lsi05G011570	Cucumber (Gy14) v2	cgyblsiB187