Carg22826 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22826
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Phospholipid hydroperoxide glutathione peroxidase
Location	Cucurbita_argyrosperma_scaffold_140 : 405430 .. 407958 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCGGAGAAAAAGCATACAAAATCTCCAACGATCCCATAATTCAGAAACCCGGCAATCGGATTCCGCCCTTTTTCTTTCTCAACATCTCCTTCTCTCTCTGATTCAATCAATTCGATCCTTGATCCTTCACCCTTCATCGTTGCAAGGTGGAGATGCGGTTCTTCAGGAAGATTGCAGGAATTCTAGGGCTTTCCAAGGACGATGCTCACGACGTCAAGCACGAAGATGAAGACGTTGATTCCGATAATCAGGCTCGGCGGGGCTTTAGCGTCCCAGTTCAGGTCGCTGTTAATCGTCCGCAACCCGGTCCTGTTCTTCTTCCCTCTAGTTCACGTGATGGTGGAGTTCAGGTCCATTCTATTATCAGTTTTTTTGTCCTCTCTTTTAATTTTCTCATGACTTCTGGATTGTGCTTTCCGTTGTTTCATGAATGAATTTGGCAATTTATTCTCTTAGGCGAGTCTAATGGTCGAGGTCAGCGGATTTATTTCCATAGTTCAAACCCGTTAGTTACGTCGAAAATCTTTTGTCGTCATTGTTCGGAGTAGGTCACTTTGAGTTTAAATTTATGTTCTGCTTCTAATACGCATGTTGATTATTGGATGTCCTATCTTTTTTTGTCTGTGATTCAATGAAAATGGGTTCGTGCATTTTTTTATGTGAGCTCGGATATCTTTTGACCATAAATTTGTTTGAAATTGGTTTCTTTTGGAATTTATGAATGTTGCTAACACAACCTCGTTAAAGTAAATGCTTATCAACTGTTCTTAATCTTTGTTATTTTCCCCCCCTCATGTTTTAACGATTGAAATAATTCATATCCAAAGTAAACTAGAAGACAAGGAAATAGCGTTCATCTAGTAAATACATTTCCCCAGGGAGGATGCTAAACGATTAGAGCCATTTAAGTTTCTGATTTCAGCTGTTAAGAGCTTCTTTTTGATATTATTGTCTTGCCAATGATTAATGAATGTGATGGATATCAAGTATACGTGAGTGATGAGACATGTTAAATCAATGCGTTGTGAATACAATGCAGATAAGATACACAAGTAGCAATTAAGGGGAAAGAAAATTGAACCAGGGAAGAGGTGAACCTAAGCAAACAACTCGGTTTCCATTTTATTGATTCTTGTCTCGAACGATAGTGTCAGTTCAAAGGGACTTTATTAAAAGTTAAACAAACACCGAATCCTACTCCGACTATCTACAAGGGCCCTTGTAACTAAGAAACTGTAACAATCTAAACCTATTGGTAGCAAATATTGTCCTTTTTGGACTTTCCCTTTCGGACTTCCTCTTAAGGTTTTTTAAAATGCGGGAGAGGTTTCCACACCCTTATAAAGAATGGTTCGTTCCCTTCTCCAACCGACGTGGGATCTCACATAAACCTACTAATACTATGTTTCCATGGAAAACGTAACCTAAAGTCAGTTTAAGTTTCAATTGGATTCCGGGGGTTATAATCATTTACATTCTAAATAAGCTGAAATTGGAATCAAAAGAATTAAAACCATAGCCAAACAAAATGACTTCCCGTTTAGTTTCTAAAATAAAGAGAAACCTTTTGATGCAAACTTAGGGTGTAGGCTATTTCTTCTCCATTCACCAGAGTGATCCGCCAATCGAAATCATAATCTGATCCATCTGTATCATTATATCTATATATATATATATATATCTGCACTGAGGGATCTTATTCTAATGAGACCTTAACTCTGCTTCATCTACATGATGGGTGATCTCGAGTCATGACATGGTTTCTAATATTTGCAAGTTTTCCTTCCATTGTACTCATTCAATGGTACTAGGACTTTTTACTGGTGAAATGTAATGATGGGTTTTTTTCATTTGCAAGATTACTATGATGGCGGGTTTCTTAATCTCGAAATATTTTCACACATTCAGGGTTTAACATGGTATGCTAAGCGCCTTCGAGTTGATGAAGATGGAGATGTAGCCGAACAGTTCCTGGATGAGGTCTTACCTGAGATACCAGCCAGTACTACAGACCATCACAAGGCGATTCCTCGATTTCAGATAAATAATAGAAACAGACCAGCTAAAGTAGAGAAGCAGGTTATATTGCAGGAAGGTAAACTTCAACAGTGTATTGAACATCAAGGTAGATTGCTATTGGTATGAAGGGGAAAAAAACCCTGAGAAAACTGATCCCTTCACGCATTCGTGTCCAAGGTTCGATATTTTAAGTTTATTTGCACATGGTGGTCAAGTTATGAGGATGATCTGTGTCGGTTTTGATGACGAGAAAGCTTCGCATACAGTACCGAAGCTTGCATCAACTTTATTAAGGAGTCTACATTAGAGGCTTAGATACCCGGTTCTTTCTCAAGCGTTATGGTTGTGCTGCTGATCATTGAACCCTAAAGGTGGAGGAGGTAAAAGAGAAACAGAAATGGCCACTAACACACTAACCATTTGAATCTGCAGCTTTAAGTTGTTTAATGTGTCTTGTTCTTCACCTGTTCTTCACTTGTTCTTCACTTGTTCTTCACTTGTTCTTCACT

mRNA sequence

GTCGGAGAAAAAGCATACAAAATCTCCAACGATCCCATAATTCAGAAACCCGGCAATCGGATTCCGCCCTTTTTCTTTCTCAACATCTCCTTCTCTCTCTGATTCAATCAATTCGATCCTTGATCCTTCACCCTTCATCGTTGCAAGGTGGAGATGCGGTTCTTCAGGAAGATTGCAGGAATTCTAGGGCTTTCCAAGGACGATGCTCACGACGTCAAGCACGAAGATGAAGACGTTGATTCCGATAATCAGGCTCGGCGGGGCTTTAGCGTCCCAGTTCAGGTCGCTGTTAATCGTCCGCAACCCGGTCCTGTTCTTCTTCCCTCTAGTTCACGTGATGGTGGAGTTCAGGGTTTAACATGGTATGCTAAGCGCCTTCGAGTTGATGAAGATGGAGATGTAGCCGAACAGTTCCTGGATGAGGTCTTACCTGAGATACCAGCCAGTACTACAGACCATCACAAGGCGATTCCTCGATTTCAGATAAATAATAGAAACAGACCAGCTAAAGTAGAGAAGCAGGTTATATTGCAGGAAGGTAAACTTCAACAGTGTATTGAACATCAAGGTAGATTGCTATTGGTATGAAGGGGAAAAAAACCCTGAGAAAACTGATCCCTTCACGCATTCGTGTCCAAGGTTCGATATTTTAAGTTTATTTGCACATGGTGGTCAAGTTATGAGGATGATCTGTGTCGGTTTTGATGACGAGAAAGCTTCGCATACAGTACCGAAGCTTGCATCAACTTTATTAAGGAGTCTACATTAGAGGCTTAGATACCCGGTTCTTTCTCAAGCGTTATGGTTGTGCTGCTGATCATTGAACCCTAAAGGTGGAGGAGGTAAAAGAGAAACAGAAATGGCCACTAACACACTAACCATTTGAATCTGCAGCTTTAAGTTGTTTAATGTGTCTTGTTCTTCACCTGTTCTTCACTTGTTCTTCACTTGTTCTTCACTTGTTCTTCACT

Coding sequence (CDS)

ATGCGGTTCTTCAGGAAGATTGCAGGAATTCTAGGGCTTTCCAAGGACGATGCTCACGACGTCAAGCACGAAGATGAAGACGTTGATTCCGATAATCAGGCTCGGCGGGGCTTTAGCGTCCCAGTTCAGGTCGCTGTTAATCGTCCGCAACCCGGTCCTGTTCTTCTTCCCTCTAGTTCACGTGATGGTGGAGTTCAGGGTTTAACATGGTATGCTAAGCGCCTTCGAGTTGATGAAGATGGAGATGTAGCCGAACAGTTCCTGGATGAGGTCTTACCTGAGATACCAGCCAGTACTACAGACCATCACAAGGCGATTCCTCGATTTCAGATAAATAATAGAAACAGACCAGCTAAAGTAGAGAAGCAGGTTATATTGCAGGAAGGTAAACTTCAACAGTGTATTGAACATCAAGGTAGATTGCTATTGGTATGA

Protein sequence

MRFFRKIAGILGLSKDDAHDVKHEDEDVDSDNQARRGFSVPVQVAVNRPQPGPVLLPSSSRDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPASTTDHHKAIPRFQINNRNRPAKVEKQVILQEGKLQQCIEHQGRLLLV

Homology

[Close]

BLAST of Carg22826 vs. NCBI nr
Match: XP_022952431.1 (uncharacterized protein LOC111455119 [Cucurbita moschata])

HSP 1 Score: 291.2 bits (744), Expect = 1.9e-75
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MRFFRKIAGILGLSKDDAHDVKHEDEDVDSDNQARRGFSVPVQVAVNRPQPGPVLLPSSS 60
           MRFFRKIAGILGLSKDDAHDVKHEDEDVDSDNQARRGFSVPVQVAVNRPQPGPVLLPSSS
Sbjct: 1   MRFFRKIAGILGLSKDDAHDVKHEDEDVDSDNQARRGFSVPVQVAVNRPQPGPVLLPSSS 60

Query: 61  RDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPASTTDHHKAIPRFQINNRNRPAKV 120
           RDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPASTTDHHKAIPRFQINNRNRPAKV
Sbjct: 61  RDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPASTTDHHKAIPRFQINNRNRPAKV 120

Query: 121 EKQVILQEGKLQQCIEHQGRLLLV 145
           EKQVILQEGKLQQCIEHQGRLLLV
Sbjct: 121 EKQVILQEGKLQQCIEHQGRLLLV 144

[Close]

BLAST of Carg22826 vs. NCBI nr
Match: XP_022972010.1 (uncharacterized protein LOC111470656 [Cucurbita maxima])

HSP 1 Score: 287.3 bits (734), Expect = 2.8e-74
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MRFFRKIAGILGLSKDDAHDVKHEDEDVDSDNQARRGFSVPVQVAVNRPQPGPVLLPSSS 60
           MRFFRKIAGILGLSKDDAHDVKHEDEDVDSDNQARRGFSVPV+VAVNRPQPGPVL+PSSS
Sbjct: 1   MRFFRKIAGILGLSKDDAHDVKHEDEDVDSDNQARRGFSVPVEVAVNRPQPGPVLVPSSS 60

Query: 61  RDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPASTTDHHKAIPRFQINNRNRPAKV 120
           RDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPASTTDHHKA PRFQINNRNRPAKV
Sbjct: 61  RDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPASTTDHHKAFPRFQINNRNRPAKV 120

Query: 121 EKQVILQEGKLQQCIEHQGRLLLV 145
           EKQVILQEGKLQQCIEHQGRLLLV
Sbjct: 121 EKQVILQEGKLQQCIEHQGRLLLV 144

[Close]

BLAST of Carg22826 vs. NCBI nr
Match: XP_023553640.1 (uncharacterized protein LOC111811132 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.0 bits (733), Expect = 3.6e-74
Identity = 141/144 (97.92%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MRFFRKIAGILGLSKDDAHDVKHEDEDVDSDNQARRGFSVPVQVAVNRPQPGPVLLPSSS 60
           MRFFRKIAGILGLSKDDAHDVKHEDEDVDSDNQARRGFSVP QVAVNRPQPGPVLLPS+S
Sbjct: 1   MRFFRKIAGILGLSKDDAHDVKHEDEDVDSDNQARRGFSVPAQVAVNRPQPGPVLLPSTS 60

Query: 61  RDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPASTTDHHKAIPRFQINNRNRPAKV 120
           RDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPASTTDHHKA PRFQINNRNRPAKV
Sbjct: 61  RDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPASTTDHHKAFPRFQINNRNRPAKV 120

Query: 121 EKQVILQEGKLQQCIEHQGRLLLV 145
           EKQVILQEGKLQQCIEHQGRLLLV
Sbjct: 121 EKQVILQEGKLQQCIEHQGRLLLV 144

[Close]

BLAST of Carg22826 vs. NCBI nr
Match: XP_023533597.1 (uncharacterized protein LOC111795416 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.1 bits (627), Expect = 7.1e-62
Identity = 127/156 (81.41%), Postives = 133/156 (85.26%), Query Frame = 0


Query: 1   MRFFRKIAGILGLSKDDAHDVKHEDEDVDSDNQA-----------RRGFSVPVQVAVNRP 60
           MRF RKIAG LG SKDDAHDVKHEDE+V+S NQA           RRGFSVPVQVAVN P
Sbjct: 1   MRFLRKIAGFLGFSKDDAHDVKHEDEEVESGNQAPKRVHMQETGPRRGFSVPVQVAVNVP 60

Query: 61  QPGPVLLPSSSRDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPAS-TTDHHKAIPR 120
           QPGP+L+PSSS DGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPE+P S TTDHHK  PR
Sbjct: 61  QPGPILVPSSSGDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEMPTSTTTDHHKPYPR 120

Query: 121 FQINNRNRPAKVEKQVILQEGKLQQCIEHQGRLLLV 145
           FQINNRNR AKV+ QVILQEGKLQQCIEHQGRLLLV
Sbjct: 121 FQINNRNRVAKVKNQVILQEGKLQQCIEHQGRLLLV 156

[Close]

BLAST of Carg22826 vs. NCBI nr
Match: XP_022930967.1 (uncharacterized protein LOC111437301 [Cucurbita moschata])

HSP 1 Score: 245.0 bits (624), Expect = 1.6e-61
Identity = 127/156 (81.41%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MRFFRKIAGILGLSKDDAHDVKHEDEDVDSDNQA-----------RRGFSVPVQVAVNRP 60
           MRF RKIAG LG SKDDAHDVKHEDE+V+S NQA           RRGFSVPVQVAVN P
Sbjct: 1   MRFLRKIAGFLGFSKDDAHDVKHEDEEVESGNQAPKRVHMQETGPRRGFSVPVQVAVNVP 60

Query: 61  QPGPVLLPSSSRDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPAS-TTDHHKAIPR 120
           QPGP+L+PSSS DGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPE P S TTDHHK  PR
Sbjct: 61  QPGPILVPSSSGDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPETPTSTTTDHHKPYPR 120

Query: 121 FQINNRNRPAKVEKQVILQEGKLQQCIEHQGRLLLV 145
           FQINNRNR AKV+ QVILQEGKLQQCIEHQGRLLLV
Sbjct: 121 FQINNRNRLAKVKNQVILQEGKLQQCIEHQGRLLLV 156

[Close]

BLAST of Carg22826 vs. TAIR10
Match: AT4G17960.1 (unknown protein)

HSP 1 Score: 144.1 bits (362), Expect = 6.9e-35
Identity = 79/159 (49.69%), Postives = 104/159 (65.41%), Query Frame = 0


Query: 1   MRFFRKIAGILGLSKDDAHDVKHEDEDV----DSDNQ--------ARRGFSVPVQVAVNR 60
           M FF+K+AG+ G  ++    +K+E++D+    D  NQ         R+GF VPVQVAV R
Sbjct: 1   MGFFKKLAGVFGFGQE---VLKNEEDDIDVYGDGGNQQRFRETGLPRKGFGVPVQVAVER 60

Query: 61  PQPGPVLLPSSSRDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPASTTDHH---KA 120
            Q GP+L P ++ DGG+QGL WY KRLRVDEDGDVA++FL+E   E   +  D H   K 
Sbjct: 61  SQLGPLLQPCANGDGGIQGLRWYTKRLRVDEDGDVADEFLEE--GEKSTNAEDDHNCIKT 120

Query: 121 IPRFQINNRNRPAKVEKQVILQEGKLQQCIEHQGRLLLV 145
           +PRFQI  + +P KV   V+  +GKLQQCIEHQGRL +V
Sbjct: 121 MPRFQIKRKTKPVKVRGLVVSSDGKLQQCIEHQGRLFIV 154

[Close]

BLAST of Carg22826 vs. TAIR10
Match: AT5G46620.1 (unknown protein)

HSP 1 Score: 92.0 bits (227), Expect = 3.1e-19
Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 0


Query: 35  RRGFSVPVQVAVNRPQPGPVLLPSSSRDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPE 94
           R+GF VPVQVAV R  PGP+L P ++ DGGVQGL WY+ RL++DEDGDVA++FL++    
Sbjct: 61  RKGFGVPVQVAVERSNPGPILQPCAALDGGVQGLRWYSMRLKIDEDGDVADEFLED---- 120

Query: 95  IPASTTDHHKAIPRFQINNRNRPAKVEKQVILQEGKLQ 133
                  + K +PR     + + AKV   VI  +GKLQ
Sbjct: 121 ------QNCKTLPR---KCKTKAAKVRGLVISSDGKLQ 145

[Close]

BLAST of Carg22826 vs. TrEMBL
Match: tr|A0A1S3CRI6|A0A1S3CRI6_CUCME (uncharacterized protein LOC103503527 OS=Cucumis melo OX=3656 GN=LOC103503527 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 6.8e-61
Identity = 122/156 (78.21%), Postives = 131/156 (83.97%), Query Frame = 0


Query: 1   MRFFRKIAGILGLSKDDAHDVKHEDEDVDSDNQA------------RRGFSVPVQVAVNR 60
           MRFFRKIAGILG SKDD+HDVK+ED+DVDSD  A            RRGFSVPVQVAVNR
Sbjct: 1   MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDTHAPDRVHMQATGLPRRGFSVPVQVAVNR 60

Query: 61  PQPGPVLLPSSSRDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPASTTDHHKAIPR 120
             PGP+LLPSSS DGGVQGLTWYAK LR+DEDGDVAEQFL+EV+PE+  STTDH K  PR
Sbjct: 61  SNPGPILLPSSSGDGGVQGLTWYAKGLRIDEDGDVAEQFLEEVIPEVQTSTTDHPKPFPR 120

Query: 121 FQINNRNRPAKVEKQVILQEGKLQQCIEHQGRLLLV 145
           FQINNRNRPAKVE QVIL+EGKLQQCIEHQGRLLLV
Sbjct: 121 FQINNRNRPAKVENQVILKEGKLQQCIEHQGRLLLV 156

[Close]

BLAST of Carg22826 vs. TrEMBL
Match: tr|A0A0A0LF42|A0A0A0LF42_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902940 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.9e-59
Identity = 119/156 (76.28%), Postives = 129/156 (82.69%), Query Frame = 0


Query: 1   MRFFRKIAGILGLSKDDAHDVKHEDEDVDSDNQ------------ARRGFSVPVQVAVNR 60
           MRFFRKIAGILG SKDD+HDVK+ED+DVDSD               RRGF VPVQVAVNR
Sbjct: 1   MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDTHPPDRVHMQATGLPRRGFGVPVQVAVNR 60

Query: 61  PQPGPVLLPSSSRDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPASTTDHHKAIPR 120
             PGP+LLPSSS DGGVQGLTWYAK LR+DEDGDVAEQFL+EV+PE+  STT+H K  PR
Sbjct: 61  SNPGPILLPSSSGDGGVQGLTWYAKGLRIDEDGDVAEQFLEEVIPEVQTSTTNHPKPFPR 120

Query: 121 FQINNRNRPAKVEKQVILQEGKLQQCIEHQGRLLLV 145
           FQINNRNRPAKVE QVIL+EGKLQQCIEHQGRLLLV
Sbjct: 121 FQINNRNRPAKVENQVILKEGKLQQCIEHQGRLLLV 156

[Close]

BLAST of Carg22826 vs. TrEMBL
Match: tr|A0A1Q3BPK9|A0A1Q3BPK9_CEPFO (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_13320 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.7e-41
Identity = 89/153 (58.17%), Postives = 108/153 (70.59%), Query Frame = 0


Query: 1   MRFFRKIAGILGLSKDDAHDVKHEDEDVDSDNQA------------RRGFSVPVQVAVNR 60
           MRF R+IAGILG S+DD H+ K ++E    D+ A            R+GFSVPVQVAV+R
Sbjct: 1   MRFLRRIAGILGFSRDDGHEFKDQEEPDQDDDPAHHQPIFHESGLPRKGFSVPVQVAVDR 60

Query: 61  PQPGPVLLPSSSRDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPASTTDHHKAIPR 120
            QPGPVL+P +S DGGVQGL W+AKRLR+DEDGDVAE+FLDEVLPE P S     K  PR
Sbjct: 61  SQPGPVLIPCTSGDGGVQGLKWHAKRLRIDEDGDVAEEFLDEVLPEAPHSAEVQDKPFPR 120

Query: 121 FQINNRNRPAKVEKQVILQEGKLQQCIEHQGRL 142
           F +    RPAKV  Q++  +GK+QQC+EH GRL
Sbjct: 121 FVVKYSARPAKVRNQIMSCDGKIQQCVEHGGRL 153

[Close]

BLAST of Carg22826 vs. TrEMBL
Match: tr|A0A0B0PUG9|A0A0B0PUG9_GOSAR (Putative phospholipid hydroperoxide glutathione peroxidase OS=Gossypium arboreum OX=29729 GN=F383_13537 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.7e-40
Identity = 86/155 (55.48%), Postives = 112/155 (72.26%), Query Frame = 0


Query: 1   MRFFRKIAGILGLSKDDAHDVKHEDEDVDSDNQA-------------RRGFSVPVQVAVN 60
           MRFFR+IAG+LGL++DD  +VK ++ D  +++Q              RRGFSVPVQVA  
Sbjct: 1   MRFFRRIAGLLGLARDDGQEVKDQENDPQNNSQTPNNPPVFQETGLPRRGFSVPVQVAAA 60

Query: 61  RPQPGPVLLPSSSRDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPAS-TTDHHKAI 120
           RP PGP+LLP +S DGGVQGL WYAKRLR+DEDGDVA++FLDEVLP+   S   ++ KA 
Sbjct: 61  RPHPGPLLLPCTSSDGGVQGLKWYAKRLRIDEDGDVADEFLDEVLPQTSGSANAENEKAF 120

Query: 121 PRFQINNRNRPAKVEKQVILQEGKLQQCIEHQGRL 142
           P+FQ+    R A V+ QV+  +GK+QQC+E+QGRL
Sbjct: 121 PKFQVKYNTRVANVKTQVMSHDGKIQQCVEYQGRL 155

[Close]

BLAST of Carg22826 vs. TrEMBL
Match: tr|A0A1U8M3F2|A0A1U8M3F2_GOSHI (uncharacterized protein LOC107933580 OS=Gossypium hirsutum OX=3635 GN=LOC107933580 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.0e-40
Identity = 86/155 (55.48%), Postives = 111/155 (71.61%), Query Frame = 0


Query: 1   MRFFRKIAGILGLSKDDAHDVKHEDEDVDSDNQA-------------RRGFSVPVQVAVN 60
           MRFFR+IAG+LGL++DD  +VK ++ D  +++Q              RRGFSVPVQVA  
Sbjct: 1   MRFFRRIAGLLGLARDDGQEVKDQENDPQNNSQTPNNPPVFQETGLPRRGFSVPVQVAAA 60

Query: 61  RPQPGPVLLPSSSRDGGVQGLTWYAKRLRVDEDGDVAEQFLDEVLPEIPAS-TTDHHKAI 120
           RP P P+LLP SS DGGVQGL WYAKRLR+DEDGDVA++FLDEVLP+   S   ++ KA 
Sbjct: 61  RPHPAPLLLPCSSSDGGVQGLKWYAKRLRIDEDGDVADEFLDEVLPQTSGSANAENEKAF 120

Query: 121 PRFQINNRNRPAKVEKQVILQEGKLQQCIEHQGRL 142
           P+FQ+    R A V+ QV+  +GK+QQC+E+QGRL
Sbjct: 121 PKFQVKYNTRAANVKTQVMSHDGKIQQCVEYQGRL 155

The following BLAST results are available for this feature:

BLAST of Carg22826 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952431.1	1.9e-75	100.00	uncharacterized protein LOC111455119 [Cucurbita moschata]	[more]
XP_022972010.1	2.8e-74	97.92	uncharacterized protein LOC111470656 [Cucurbita maxima]	[more]
XP_023553640.1	3.6e-74	97.92	uncharacterized protein LOC111811132 [Cucurbita pepo subsp. pepo]	[more]
XP_023533597.1	7.1e-62	81.41	uncharacterized protein LOC111795416 [Cucurbita pepo subsp. pepo]	[more]
XP_022930967.1	1.6e-61	81.41	uncharacterized protein LOC111437301 [Cucurbita moschata]	[more]

BLAST of Carg22826 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17960.1	6.9e-35	49.69	unknown protein	[more]
AT5G46620.1	3.1e-19	48.98	unknown protein	[more]

BLAST of Carg22826 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg22826 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CRI6\|A0A1S3CRI6_CUCME	6.8e-61	78.21	uncharacterized protein LOC103503527 OS=Cucumis melo OX=3656 GN=LOC103503527 PE=...	[more]
tr\|A0A0A0LF42\|A0A0A0LF42_CUCSA	2.9e-59	76.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902940 PE=4 SV=1	[more]
tr\|A0A1Q3BPK9\|A0A1Q3BPK9_CEPFO	2.7e-41	58.17	Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3...	[more]
tr\|A0A0B0PUG9\|A0A0B0PUG9_GOSAR	1.7e-40	55.48	Putative phospholipid hydroperoxide glutathione peroxidase OS=Gossypium arboreum...	[more]
tr\|A0A1U8M3F2\|A0A1U8M3F2_GOSHI	3.0e-40	55.48	uncharacterized protein LOC107933580 OS=Gossypium hirsutum OX=3635 GN=LOC1079335...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22826-RA	Carg22826-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35750	FAMILY NOT NAMED	coord: 1..143

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22826	Cla016177	Watermelon (97103) v1	carwmB0280
Carg22826	Csa3G902940	Cucumber (Chinese Long) v2	carcuB0314
Carg22826	MELO3C003396	Melon (DHL92) v3.5.1	carmeB0292
Carg22826	ClCG09G012070	Watermelon (Charleston Gray)	carwcgB0279
Carg22826	CSPI03G46860	Wild cucumber (PI 183967)	carcpiB0320
Carg22826	Cucsa.313290	Cucumber (Gy14) v1	carcgyB0340
Carg22826	CmoCh19G004780	Cucurbita moschata (Rifu)	carcmoB0397
Carg22826	Lsi05G011570	Bottle gourd (USVL1VR-Ls)	carlsiB264
Carg22826	Cp4.1LG15g03540	Cucurbita pepo (Zucchini)	carcpeB0401
Carg22826	MELO3C003396.2	Melon (DHL92) v3.6.1	carmedB0303
Carg22826	CsaV3_3G049300	Cucumber (Chinese Long) v3	carcucB0320
Carg22826	Cla97C09G174960	Watermelon (97103) v2	carwmbB0296
Carg22826	Bhi05G000368	Wax gourd	carwgoB0378

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg22826	Carg08830	Silver-seed gourd	carcarB322

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22826	Cucumber (Gy14) v2	carcgybB0302
Carg22826	Cucurbita maxima (Rimu)	carcmaB0401