Lsi05G010890 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGATCCATGGCTAAGCAATGGCCAAATCTTGTCTGTTCATTGCAAATCAAAAGACAATGATTTAGGAGTTCACAAGCTTAGTGTTGGAACTGAATTCAATTGGAGATTTAGAGTAAACTTTTGGAATACGACGTTGTTTTGGTGTTACTTGCAGAAGCCAAATGCACAACATAAGTCATTCGAAGCCTTTTGGATTGAGAGCACGTCAATTTGGCTCTATAATATGTGCTATGATTCTAATTGCATTTGGATAGCTAAAGATGATGGAATTTATTTGAAAGACAACACTGCTCAAAAAGATGTTTTGATTCATAAATGGGAATAA ATGGCAGATCCATGGCTAAGCAATGGCCAAATCTTGTCTGTTCATTGCAAATCAAAAGACAATGATTTAGGAGTTCACAAGCTTAGTGTTGGAACTGAATTCAATTGGAGATTTAGAGTAAACTTTTGGAATACGACGTTGTTTTGGTGTTACTTGCAGAAGCCAAATGCACAACATAAGTCATTCGAAGCCTTTTGGATTGAGAGCACGTCAATTTGGCTCTATAATATGTGCTATGATTCTAATTGCATTTGGATAGCTAAAGATGATGGAATTTATTTGAAAGACAACACTGCTCAAAAAGATGTTTTGATTCATAAATGGGAATAA ATGGCAGATCCATGGCTAAGCAATGGCCAAATCTTGTCTGTTCATTGCAAATCAAAAGACAATGATTTAGGAGTTCACAAGCTTAGTGTTGGAACTGAATTCAATTGGAGATTTAGAGTAAACTTTTGGAATACGACGTTGTTTTGGTGTTACTTGCAGAAGCCAAATGCACAACATAAGTCATTCGAAGCCTTTTGGATTGAGAGCACGTCAATTTGGCTCTATAATATGTGCTATGATTCTAATTGCATTTGGATAGCTAAAGATGATGGAATTTATTTGAAAGACAACACTGCTCAAAAAGATGTTTTGATTCATAAATGGGAATAA MADPWLSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLIHKWE
BLAST of Lsi05G010890 vs. TrEMBL
Match: A0A0A0K6N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.1e-30 Identity = 60/104 (57.69%), Postives = 72/104 (69.23%), Query Frame = 1
BLAST of Lsi05G010890 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 3.2e-25 Identity = 52/104 (50.00%), Postives = 67/104 (64.42%), Query Frame = 1
BLAST of Lsi05G010890 vs. TrEMBL
Match: V4VUI1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022738mg PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 2.7e-24 Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 1
BLAST of Lsi05G010890 vs. TrEMBL
Match: A0A0D2U1W3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G390100 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 6.1e-24 Identity = 54/104 (51.92%), Postives = 67/104 (64.42%), Query Frame = 1
BLAST of Lsi05G010890 vs. TrEMBL
Match: A0A0D2U1P1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G389900 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 7.9e-24 Identity = 53/104 (50.96%), Postives = 67/104 (64.42%), Query Frame = 1
BLAST of Lsi05G010890 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1) HSP 1 Score: 98.6 bits (244), Expect = 2.5e-21 Identity = 44/104 (42.31%), Postives = 62/104 (59.62%), Query Frame = 1
BLAST of Lsi05G010890 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 97.1 bits (240), Expect = 7.3e-21 Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 1
BLAST of Lsi05G010890 vs. TAIR10
Match: AT5G04350.1 (AT5G04350.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 71.6 bits (174), Expect = 3.3e-13 Identity = 34/97 (35.05%), Postives = 54/97 (55.67%), Query Frame = 1
BLAST of Lsi05G010890 vs. TAIR10
Match: AT3G26880.1 (AT3G26880.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 70.9 bits (172), Expect = 5.6e-13 Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 1
BLAST of Lsi05G010890 vs. TAIR10
Match: AT5G06020.1 (AT5G06020.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 69.7 bits (169), Expect = 1.3e-12 Identity = 36/102 (35.29%), Postives = 49/102 (48.04%), Query Frame = 1
BLAST of Lsi05G010890 vs. NCBI nr
Match: gi|659124369|ref|XP_008462123.1| (PREDICTED: uncharacterized protein LOC103500552 [Cucumis melo]) HSP 1 Score: 160.2 bits (404), Expect = 2.0e-36 Identity = 67/104 (64.42%), Postives = 80/104 (76.92%), Query Frame = 1
BLAST of Lsi05G010890 vs. NCBI nr
Match: gi|778730341|ref|XP_011659760.1| (PREDICTED: uncharacterized protein LOC105436265 [Cucumis sativus]) HSP 1 Score: 145.6 bits (366), Expect = 5.1e-32 Identity = 60/104 (57.69%), Postives = 75/104 (72.12%), Query Frame = 1
BLAST of Lsi05G010890 vs. NCBI nr
Match: gi|778726822|ref|XP_004139670.2| (PREDICTED: uncharacterized protein LOC101212063 [Cucumis sativus]) HSP 1 Score: 140.6 bits (353), Expect = 1.6e-30 Identity = 60/104 (57.69%), Postives = 72/104 (69.23%), Query Frame = 1
BLAST of Lsi05G010890 vs. NCBI nr
Match: gi|659123189|ref|XP_008461539.1| (PREDICTED: uncharacterized protein LOC103500111 [Cucumis melo]) HSP 1 Score: 139.4 bits (350), Expect = 3.7e-30 Identity = 61/100 (61.00%), Postives = 74/100 (74.00%), Query Frame = 1
BLAST of Lsi05G010890 vs. NCBI nr
Match: gi|659116359|ref|XP_008458036.1| (PREDICTED: uncharacterized protein LOC103497573 [Cucumis melo]) HSP 1 Score: 139.0 bits (349), Expect = 4.8e-30 Identity = 58/104 (55.77%), Postives = 71/104 (68.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |