CsaV3_7G025590 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G025590
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Plant self-incompatibility protein S1 family
Location	chr7 : 15028381 .. 15028733 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTTGAAAAATGGCATATCCACGTTGTGAATGGGCTAAGCAATGGTCAAATCTTGTTGGCTCATTGCAAATCCAAAGACAATGATTTAGGAGAACGTAGGCTTATTGCTGGAACTGAATTCAATTGGAGATTTAGAGTAAATTTTTGGAATACGACGTTGTTTTGGTGTTACTTGCAAAAGCCAAATGGACAACATTCATCATTTGAATCGTTTTGGATTGAGAGCAGATCAGTTTGGCTATATACAATGTGCTTTGAGAAAAATTGTATTTGGACTGCTAAAGATGATGGAATTTATTTGAAGGACAATTTCGATACTCACAAAGATATTTTGATTCATAAGTGGGAATAA

mRNA sequence

CTTGAAAAATGGCATATCCACGTTGTGAATGGGCTAAGCAATGGTCAAATCTTGTTGGCTCATTGCAAATCCAAAGACAATGATTTAGGAGAACGTAGGCTTATTGCTGGAACTGAATTCAATTGGAGATTTAGAGTAAATTTTTGGAATACGACGTTGTTTTGGTGTTACTTGCAAAAGCCAAATGGACAACATTCATCATTTGAATCGTTTTGGATTGAGAGCAGATCAGTTTGGCTATATACAATGTGCTTTGAGAAAAATTGTATTTGGACTGCTAAAGATGATGGAATTTATTTGAAGGACAATTTCGATACTCACAAAGATATTTTGATTCATAAGTGGGAATAA

Coding sequence (CDS)

CTTGAAAAATGGCATATCCACGTTGTGAATGGGCTAAGCAATGGTCAAATCTTGTTGGCTCATTGCAAATCCAAAGACAATGATTTAGGAGAACGTAGGCTTATTGCTGGAACTGAATTCAATTGGAGATTTAGAGTAAATTTTTGGAATACGACGTTGTTTTGGTGTTACTTGCAAAAGCCAAATGGACAACATTCATCATTTGAATCGTTTTGGATTGAGAGCAGATCAGTTTGGCTATATACAATGTGCTTTGAGAAAAATTGTATTTGGACTGCTAAAGATGATGGAATTTATTTGAAGGACAATTTCGATACTCACAAAGATATTTTGATTCATAAGTGGGAATAA

Protein sequence

LEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQKPNGQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKWE

Homology

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BLAST of CsaV3_7G025590 vs. NCBI nr
Match: XP_022143772.1 (S-protein homolog 74-like [Momordica charantia])

HSP 1 Score: 194.1 bits (492), Expect = 2.6e-46
Identity = 79/116 (68.10%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 1   LEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQK 60
           L+KW IHVVNGLSNGQ L  HCKSKDNDLGE  L +GTEFNW FRVN WNTTLFWCYL K
Sbjct: 35  LKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHK 94

Query: 61  PNGQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKWE 117
           P+G+ +SF+ FW+E +S+WL+  C+  NCIWTAKDDGIYL+DN    +DIL+H+W+
Sbjct: 95  PDGKSASFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDN-PVQRDILVHEWK 149

[Close]

BLAST of CsaV3_7G025590 vs. NCBI nr
Match: XP_016902699.1 (PREDICTED: uncharacterized protein LOC107991826 [Cucumis melo])

HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45
Identity = 77/115 (66.96%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 1   LEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQK 60
           LE+WHIH+VNGLSN Q L  HC+SKD+DLG+R L  GTEFNW F++NFW+TTLFWCYLQK
Sbjct: 58  LERWHIHIVNGLSNDQNLFVHCQSKDDDLGKRYLSVGTEFNWTFKINFWDTTLFWCYLQK 117

Query: 61  PNGQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKW 116
           PN +  SFE+FW+E +S+WL+  CF+ NCIWTAKDDGIYLKDN   ++D L+H W
Sbjct: 118 PNAESVSFEAFWVERKSIWLFYRCFKSNCIWTAKDDGIYLKDN-PANRDALVHNW 171

[Close]

BLAST of CsaV3_7G025590 vs. NCBI nr
Match: XP_022143780.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 180.3 bits (456), Expect = 3.9e-42
Identity = 75/115 (65.22%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 1   LEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQK 60
           L KW IHV N LSN Q+L  HCKSK++DLGE  L  GTEFNWRFRVN W+TTL+WCYLQK
Sbjct: 29  LSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGTEFNWRFRVNIWDTTLYWCYLQK 88

Query: 61  PNGQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKW 116
           PNGQ  SF++FW+E  S+WLY  C E NC W AKDDGIYL++N D  +D+ +HKW
Sbjct: 89  PNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDGIYLRNNPD-GRDVFVHKW 142

[Close]

BLAST of CsaV3_7G025590 vs. NCBI nr
Match: XP_022143829.1 (S-protein homolog 74-like [Momordica charantia])

HSP 1 Score: 175.3 bits (443), Expect = 1.3e-40
Identity = 68/116 (58.62%), Postives = 94/116 (81.03%), Query Frame = 0


Query: 1   LEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQK 60
           L++W+IHVVNGL NG++L  HCKS+D+DLGE+ L  G EF+W FRVN  +TTLFWC+L+K
Sbjct: 30  LKRWNIHVVNGLGNGRLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRK 89

Query: 61  PNGQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKWE 117
           P+ Q  SF++FW+E  S+WL+  C++ NCIWTAKDDG+YL+DN    +D+L+HKW+
Sbjct: 90  PDAQSVSFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDN-PVQRDVLVHKWQ 144

[Close]

BLAST of CsaV3_7G025590 vs. NCBI nr
Match: XP_022960229.1 (S-protein homolog 74-like [Cucurbita moschata])

HSP 1 Score: 162.5 bits (410), Expect = 8.4e-37
Identity = 67/114 (58.77%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 3   KWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQKPN 62
           KW IH+ N LSNGQ +  HCKSKDNDLGE  L  GTEF W F+VNFW+TTLFWCYL+KPN
Sbjct: 63  KWEIHIKNELSNGQAMFVHCKSKDNDLGEHTLATGTEFKWDFKVNFWDTTLFWCYLRKPN 122

Query: 63  GQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKWE 117
           G   +F++FW+E R+ WL   C    C WTA+D+GIYLKDN + + D  +H W+
Sbjct: 123 GHEMTFDAFWVEKRTEWLRVKCDGNICNWTAEDNGIYLKDNSE-NLDEFVHYWK 175

[Close]

BLAST of CsaV3_7G025590 vs. TAIR10
Match: AT4G16295.1 (S-protein homologue 1)

HSP 1 Score: 114.0 bits (284), Expect = 6.2e-26
Identity = 54/116 (46.55%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 1   LEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQK 60
           + +W + VVNGL+ G+ L  HCKSK++DLGE  L     F+W F  N  ++T FWCY+ K
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 61  PNGQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKWE 117
            NG H +   FW +   V L+  C  KNCIWTAK DG+YL  N  + +D+L  KWE
Sbjct: 98  DNG-HMNVNVFWDD---VILFHRCGWKNCIWTAKTDGLYLW-NSASGEDVLSRKWE 148

[Close]

BLAST of CsaV3_7G025590 vs. TAIR10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 110.2 bits (274), Expect = 9.0e-25
Identity = 51/116 (43.97%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 1   LEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQK 60
           + +W + V NGL+ G+ L  HCKSK+NDLG+  L     F+W F  N  ++TLFWCY+ K
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 61  PNGQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKWE 117
            +G H + + FW +   V L+  C  KNC+WTAK+DG+YL  N    +D+L  KW+
Sbjct: 98  DDG-HMNVKVFWDD---VILFHRCDWKNCVWTAKNDGLYLW-NSAIGEDVLSEKWK 148

[Close]

BLAST of CsaV3_7G025590 vs. TAIR10
Match: AT3G55677.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 67.0 bits (162), Expect = 8.7e-12
Identity = 39/111 (35.14%), Postives = 56/111 (50.45%), Query Frame = 0


Query: 1   LEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQK 60
           L K H+ + N + NGQ+L  HCKS ++DLG  RL  G  + +RFRVN   TT F C+   
Sbjct: 42  LSKKHVLIRNTVQNGQVLNIHCKSSEDDLGHIRLKHGDTWGFRFRVNMALTTRFRCHFWW 101

Query: 61  PNGQHSSFESFWIESRSVW-------LYTMCFEKNCIWTAKDDGIYLKDNF 105
               H    S+W +  +V+        Y +C E  C+W   +    L +NF
Sbjct: 102 YARDHLGHYSYWFDIFTVYRDDNPFGKYPICDE--CVWNMYE----LSENF 146

[Close]

BLAST of CsaV3_7G025590 vs. TAIR10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 67.0 bits (162), Expect = 8.7e-12
Identity = 34/99 (34.34%), Postives = 52/99 (52.53%), Query Frame = 0


Query: 10  NGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYL-QKPNGQHS-- 69
           N L + ++L  HC+SKD+DLGE  L  G ++ + F  N W TT F C + Q PN +H   
Sbjct: 33  NQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLD 92

Query: 70  --SFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDN 104
             ++E+ W         +   E +C W  ++DGIY   +
Sbjct: 93  FVAYETSW---------SKALEASCKWIGREDGIYFSQD 122

[Close]

BLAST of CsaV3_7G025590 vs. TAIR10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 65.5 bits (158), Expect = 2.5e-11
Identity = 42/117 (35.90%), Postives = 61/117 (52.14%), Query Frame = 0


Query: 2   EKWHIHVVNGLS--NGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQ 61
           +K  I V N L+  N  IL  HCKSK+ND+G + L  G   ++ F+ NFW TT FWC L 
Sbjct: 22  KKSTITVKNELNPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLY 81

Query: 62  K-PNGQH----SSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDIL 112
           K P+ +     +++++  + ++    Y         W A+DDGIY       HKD L
Sbjct: 82  KGPDYKRYRGITAYQAIGLFAKDGSSYN--------WLARDDGIYF------HKDSL 124

[Close]

BLAST of CsaV3_7G025590 vs. Swiss-Prot
Match: sp|F4JLS0|SPH1_ARATH (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-24
Identity = 54/116 (46.55%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 1   LEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQK 60
           + +W + VVNGL+ G+ L  HCKSK++DLGE  L     F+W F  N  ++T FWCY+ K
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 61  PNGQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKWE 117
            NG H +   FW +   V L+  C  KNCIWTAK DG+YL  N  + +D+L  KWE
Sbjct: 98  DNG-HMNVNVFWDD---VILFHRCGWKNCIWTAKTDGLYLW-NSASGEDVLSRKWE 148

[Close]

BLAST of CsaV3_7G025590 vs. Swiss-Prot
Match: sp|Q2HQ46|SPH74_ARATH (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.6e-23
Identity = 51/116 (43.97%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 1   LEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQK 60
           + +W + V NGL+ G+ L  HCKSK+NDLG+  L     F+W F  N  ++TLFWCY+ K
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 61  PNGQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKWE 117
            +G H + + FW +   V L+  C  KNC+WTAK+DG+YL  N    +D+L  KW+
Sbjct: 98  DDG-HMNVKVFWDD---VILFHRCDWKNCVWTAKNDGLYLW-NSAIGEDVLSEKWK 148

[Close]

BLAST of CsaV3_7G025590 vs. Swiss-Prot
Match: sp|Q9LW22|SPH21_ARATH (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.6e-10
Identity = 42/117 (35.90%), Postives = 61/117 (52.14%), Query Frame = 0


Query: 2   EKWHIHVVNGLS--NGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQ 61
           +K  I V N L+  N  IL  HCKSK+ND+G + L  G   ++ F+ NFW TT FWC L 
Sbjct: 22  KKSTITVKNELNPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLY 81

Query: 62  K-PNGQH----SSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDIL 112
           K P+ +     +++++  + ++    Y         W A+DDGIY       HKD L
Sbjct: 82  KGPDYKRYRGITAYQAIGLFAKDGSSYN--------WLARDDGIYF------HKDSL 124

[Close]

BLAST of CsaV3_7G025590 vs. Swiss-Prot
Match: sp|F2Q9V4|SPH6_ARATH (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 4.6e-10
Identity = 36/102 (35.29%), Postives = 54/102 (52.94%), Query Frame = 0


Query: 14  NGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQKPNGQHSSFESFWI 73
           N  +L  HCKS+D+D G   L  G  + W F VNF N+TL++C   +   +   F+ +  
Sbjct: 40  NDYLLGVHCKSRDDDHGFHILQKGGLYGWMFYVNFMNSTLYFCGFSQEQVKKGVFDIY-- 99

Query: 74  ESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKW 116
             ++V   + C  +NC W AK+DGIY        K+ L +KW
Sbjct: 100 --KAVRDSSRC--RNCTWEAKEDGIYGYGEI-PKKNPLFYKW 134

[Close]

BLAST of CsaV3_7G025590 vs. Swiss-Prot
Match: sp|P0DN92|SPH24_ARATH (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.8e-10
Identity = 37/102 (36.27%), Postives = 51/102 (50.00%), Query Frame = 0


Query: 14  NGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQKPNGQHSSFESFWI 73
           N  +L  HCKS+D+DLG   L  G  F W+F VNF  +TL++C   +   +   FE +  
Sbjct: 54  NDYLLGIHCKSRDDDLGFHILAKGELFGWKFHVNFCYSTLYFCGFSQGQMKKGVFEIY-- 113

Query: 74  ESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKW 116
             R+   +  C   NC W A+ DGIY     D  K  L + W
Sbjct: 114 --RANRDFYRC--ANCTWKAEKDGIYGYSE-DPVKGYLFYNW 148

[Close]

BLAST of CsaV3_7G025590 vs. TrEMBL
Match: tr|A0A1S4E390|A0A1S4E390_CUCME (uncharacterized protein LOC107991826 OS=Cucumis melo OX=3656 GN=LOC107991826 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 8.6e-46
Identity = 77/115 (66.96%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 1   LEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQK 60
           LE+WHIH+VNGLSN Q L  HC+SKD+DLG+R L  GTEFNW F++NFW+TTLFWCYLQK
Sbjct: 58  LERWHIHIVNGLSNDQNLFVHCQSKDDDLGKRYLSVGTEFNWTFKINFWDTTLFWCYLQK 117

Query: 61  PNGQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKW 116
           PN +  SFE+FW+E +S+WL+  CF+ NCIWTAKDDGIYLKDN   ++D L+H W
Sbjct: 118 PNAESVSFEAFWVERKSIWLFYRCFKSNCIWTAKDDGIYLKDN-PANRDALVHNW 171

[Close]

BLAST of CsaV3_7G025590 vs. TrEMBL
Match: tr|A0A1S3C711|A0A1S3C711_CUCME (pumilio homolog 15-like OS=Cucumis melo OX=3656 GN=LOC103497573 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 4.0e-35
Identity = 64/116 (55.17%), Postives = 81/116 (69.83%), Query Frame = 0


Query: 1   LEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQK 60
           L  W IH+ NGLSNGQ L   CKSKD+DLG++ L  G EF W F+VN W+TTLFWCYL+K
Sbjct: 27  LSSWEIHIKNGLSNGQALFVQCKSKDSDLGKQTLSTGAEFKWNFKVNIWDTTLFWCYLRK 86

Query: 61  PNGQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKWE 117
           PNG    F++FW+E ++ WL   C    C WT +D+GIYLKDN  T++D  IH W+
Sbjct: 87  PNGHELKFDAFWVEKKTEWLRVKCDGNICNWTVEDNGIYLKDN-STNEDEFIHYWK 141

[Close]

BLAST of CsaV3_7G025590 vs. TrEMBL
Match: tr|A0A0A0K6N8|A0A0A0K6N8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336430 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.2e-35
Identity = 66/116 (56.90%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 1   LEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQK 60
           L  W IH+ NGLS+GQ L  HCKSKD+DLGER L  G EF W F+VN W+TTLFWCYL+K
Sbjct: 27  LSPWEIHIKNGLSDGQALFVHCKSKDSDLGERTLSTGAEFKWNFKVNIWDTTLFWCYLRK 86

Query: 61  PNGQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKWE 117
           P G    FE+FW+E ++ WL   C    C W A+D GIYLKDN  T++D  IH W+
Sbjct: 87  PKGDQVRFEAFWVEKKTRWLRVKCDGNICNWIAEDTGIYLKDN-STNEDERIHYWK 141

[Close]

BLAST of CsaV3_7G025590 vs. TrEMBL
Match: tr|A0A1S3CEQ0|A0A1S3CEQ0_CUCME (uncharacterized protein LOC103500111 OS=Cucumis melo OX=3656 GN=LOC103500111 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.7e-33
Identity = 69/113 (61.06%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 4   WHIHVVNGLSNGQILLAHCKSKDNDLGERRL-IAGTEFNWRFRVNFWNTTLFWCYLQKPN 63
           WHIHVVNGL N Q L  HCKSKD+DLG   L   G E  W F+VNF+ TTLFWCYL+KPN
Sbjct: 35  WHIHVVNGLRN-QTLFVHCKSKDDDLGNHTLSTKGQEVQWTFKVNFFGTTLFWCYLKKPN 94

Query: 64  GQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKW 116
             + +FESFW+E    WL + CF+KNCIW AKDDGIYL++N  T+ D L+H W
Sbjct: 95  -FYVAFESFWVEKTHPWLTSRCFDKNCIWIAKDDGIYLRNNL-TNVDELVHPW 144

[Close]

BLAST of CsaV3_7G025590 vs. TrEMBL
Match: tr|A0A2P6QC93|A0A2P6QC93_ROSCH (Putative plant self-incompatibility S1 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0039321 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.9e-33
Identity = 62/112 (55.36%), Postives = 78/112 (69.64%), Query Frame = 0


Query: 4   WHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQKPNG 63
           WH+H+VNGLS+G+IL  HCKSKDNDLG   L  GTE  W F+ NF  TTLFWCYL+    
Sbjct: 28  WHVHIVNGLSSGRILFVHCKSKDNDLGIHNLAVGTETTWSFKENFIGTTLFWCYLRTDRE 87

Query: 64  QHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKW 116
           +++ F+ FW E    WL T C  K+CIWTA+DDG+Y+K N   + D LIH+W
Sbjct: 88  EYADFDVFWSEHNRKWLQTRCNWKDCIWTARDDGVYIK-NIPNNSDELIHQW 138

The following BLAST results are available for this feature:

BLAST of CsaV3_7G025590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143772.1	2.6e-46	68.10	S-protein homolog 74-like [Momordica charantia]	[more]
XP_016902699.1	1.3e-45	66.96	PREDICTED: uncharacterized protein LOC107991826 [Cucumis melo]	[more]
XP_022143780.1	3.9e-42	65.22	S-protein homolog 1-like [Momordica charantia]	[more]
XP_022143829.1	1.3e-40	58.62	S-protein homolog 74-like [Momordica charantia]	[more]
XP_022960229.1	8.4e-37	58.77	S-protein homolog 74-like [Cucurbita moschata]	[more]

BLAST of CsaV3_7G025590 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16295.1	6.2e-26	46.55	S-protein homologue 1	[more]
AT4G29035.1	9.0e-25	43.97	Plant self-incompatibility protein S1 family	[more]
AT3G55677.1	8.7e-12	35.14	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	8.7e-12	34.34	Plant self-incompatibility protein S1 family	[more]
AT3G26880.1	2.5e-11	35.90	Plant self-incompatibility protein S1 family	[more]

BLAST of CsaV3_7G025590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4JLS0\|SPH1_ARATH	1.1e-24	46.55	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
sp\|Q2HQ46\|SPH74_ARATH	1.6e-23	43.97	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
sp\|Q9LW22\|SPH21_ARATH	4.6e-10	35.90	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]
sp\|F2Q9V4\|SPH6_ARATH	4.6e-10	35.29	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]
sp\|P0DN92\|SPH24_ARATH	7.8e-10	36.27	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]

BLAST of CsaV3_7G025590 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E390\|A0A1S4E390_CUCME	8.6e-46	66.96	uncharacterized protein LOC107991826 OS=Cucumis melo OX=3656 GN=LOC107991826 PE=...	[more]
tr\|A0A1S3C711\|A0A1S3C711_CUCME	4.0e-35	55.17	pumilio homolog 15-like OS=Cucumis melo OX=3656 GN=LOC103497573 PE=4 SV=1	[more]
tr\|A0A0A0K6N8\|A0A0A0K6N8_CUCSA	5.2e-35	56.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336430 PE=4 SV=1	[more]
tr\|A0A1S3CEQ0\|A0A1S3CEQ0_CUCME	3.7e-33	61.06	uncharacterized protein LOC103500111 OS=Cucumis melo OX=3656 GN=LOC103500111 PE=...	[more]
tr\|A0A2P6QC93\|A0A2P6QC93_ROSCH	4.9e-33	55.36	Putative plant self-incompatibility S1 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Ch...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010264	Self-incomp_S1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G025590.1	CsaV3_7G025590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05938	Self-incomp_S1	coord: 5..115 e-value: 1.2E-25 score: 90.0
None	No IPR available	PANTHER	PTHR31232:SF7	S PROTEIN HOMOLOGUE 74-RELATED	coord: 2..115
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 2..115

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G025590	CSPI07G13800	Wild cucumber (PI 183967)	cpicucB414
CsaV3_7G025590	Cucsa.078530	Cucumber (Gy14) v1	cgycucB080
CsaV3_7G025590	CmaCh17G012340	Cucurbita maxima (Rimu)	cmacucB0457
CsaV3_7G025590	CmaCh08G000570	Cucurbita maxima (Rimu)	cmacucB1086
CsaV3_7G025590	CmoCh17G012120	Cucurbita moschata (Rifu)	cmocucB0450
CsaV3_7G025590	CmoCh08G000560	Cucurbita moschata (Rifu)	cmocucB1068
CsaV3_7G025590	ClCG09G009380	Watermelon (Charleston Gray)	cucwcgB547
CsaV3_7G025590	Lsi02G020500	Bottle gourd (USVL1VR-Ls)	cuclsiB538
CsaV3_7G025590	Lsi05G010890	Bottle gourd (USVL1VR-Ls)	cuclsiB560
CsaV3_7G025590	Bhi09G001167	Wax gourd	cucwgoB732

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G025590	Watermelon (97103) v2	cucwmbB573
CsaV3_7G025590	Watermelon (97103) v2	cucwmbB593
CsaV3_7G025590	Cucumber (Chinese Long) v3	cuccucB159
CsaV3_7G025590	Silver-seed gourd	carcucB0103
CsaV3_7G025590	Cucumber (Gy14) v2	cgybcucB158
CsaV3_7G025590	Cucumber (Gy14) v2	cgybcucB347
CsaV3_7G025590	Cucurbita maxima (Rimu)	cmacucB0773
CsaV3_7G025590	Cucurbita pepo (Zucchini)	cpecucB0182
CsaV3_7G025590	Cucurbita pepo (Zucchini)	cpecucB0419
CsaV3_7G025590	Cucurbita pepo (Zucchini)	cpecucB0951
CsaV3_7G025590	Melon (DHL92) v3.5.1	cucmeB554
CsaV3_7G025590	Melon (DHL92) v3.6.1	cucmedB542
CsaV3_7G025590	Watermelon (Charleston Gray)	cucwcgB596
CsaV3_7G025590	Watermelon (97103) v1	cucwmB592