Lsi05G010860 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G010860
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Plant self-incompatibility protein S1 family
Location	chr05 : 18532323 .. 18537227 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACGTTTCAAATAAAATGTACAGGAACAGATATATATATATATATAATTGAAACAAACTCCAAAGTTTACGATAATTATTTCGTATAATTTTAACCTTTTTTTTCGCAGATTAAACGATCATCATCATGAATCTCAAATATTGCAAGGGTTTACTAGTTTTGGTTTTGGCATTGTTGATGGTTATTGAAACAAGCCTTGGAGCTCCATTTGAGCGTTGGAGAGTTGAAGTAGCCAATGAAATGCAAAATGGGCAAACTTTATATCTTCGGTGCAAGTCCAAAGAAGATGATTTGGGAAAGCAATATTTAAAACATGGGCAGAAATTTTCATGGAAATTTAGAGAGAATTTGTGGCAAAATACACTTTATTGGTGCTACATGAGAAATGATCACAATCATGTATCTTTAGAAGTGTTTTGGCCAGAATCAGCTTCTCAGTCTTGGCTTGCTTATAGATGTAGAGATAATGTTTGCTATTGGTCAGCAAGAAATGATGGAATTTACATCTATAATGTTCCTGAAAATAAGTTTGAGTTTCATGCTAAATGGCTGTCTGGTTGGTAGGGTTGTTATATGTGAAGGAAATTAAGGAATTTATTTTCTTCAAAACACAGTAATAAAAGCCAAAATGAGCATAGCTCGACTGGCATAAAGCTCGGTCCGATCCCTTTGCTCCCACATATTGTCAAAAAGAAAAAAAACAGTAATAATAAAAGATTATTCTTGGACTTGTATGATGAGTTTGGATCGATTCATATATGTTTATCTTTTTTTGTAGGGGCCTTTTGTTTGTTTGTTTATTATTATTTTTTTTTGTTTGAGAAGAGATAATTAGGATCTTTAAAGGCTTGGAATTATAAATGCCCAAAATTATAGATATCCAACATCTTTAAATAACACTATTTGTTTTGTAGGGATGTTTTTATAGATATCTGAAAATACTTGGATAACTATGTTTCGGAGGATTTCTACTTGGAAATGTTTTAAATTTACAAAAATGTTTCAAGATGCTCTCACGACTATTCATTAGTTTATAATTAATTTAATGAACTTATATAATTTTTTTTTGGGAAATTTTCTCAAATAGAAAAAATGTCAAATTATTTACAGAAAATAGCAAAAAAAATACTGATAGACATTGATAGACTTCTATCAGCATCTACCAGTGATAGACTTCTATAATTTCTATCGCTGATAGACCCTGATAGACTTCTATCAGCGTCTATCACAACTATCTAAAAATTTTGCTATTTTATGTAAATAGTTTCCCTTATTTTTCTATTTTTAAAACTTCCCATTTTTTCTATTAATTTGATTTTTTAAAAATTAATATTGTTTATATTATTTTTTTTATGTATTTTCTCAATAAATTAATAGAGGAGTTTTTAAAAATAGAAAAATAATGAACACTATTTACACAAAATAGCAAAATTTTTAGATAGTTGTGGTATACGTTGATAGAAGTCTATCAGGGTCTATCAGTGATAGAAATGATAGAAGTCGATCACTGATAGATGCTGATAGAAGTTTATCAATATCTATCTTTTTTTTTTTTGCTATTTTCTGTAAATAGTTTGACATTTTTTCTATGTGTGAAAATTTTTCAAATATATTTTTTATAAAATAAATATTTTTAAATTTAAATTTGAATATCTTTCTATAAAAATAAAAACAACTACCATATAACAAAAAAATTGATATATATGGTTGACAATTTTATTTTAATTATAAAATGCAAGTAAAGAAGAGGAAGGGTAAAAAAGTAAAAAGAGGATGGCATCAACATGAGAATTTGAAAAATCCATGTTTTAGGAGGGCATCCAAAATTCTCGAGATGCCCTCGGTAAGGACATCTTAGGATGCTAGAGAATATCTAAATGCCAAGACATGCATATTAGATTATATTACTGTAAAACAAACACGGTAATCCAAATCTCCAGTACTCTATAGAAATATTGGATGTTTGTGAAACAAATGGTCCCTTATAGTTTTGATAATATAGGGATGAGAGAATTCAAACTACAAACCTCTCGATTTAAATTCGAATCTCTTCATATATATATATATATATATATATAATAGTTGAACTAGGATGGTTTGGACATTTTTCTCTTATGTTTGAGTATGTGTGTGATGTTCATTATCTACTAGATTAAATGAAATGCATTTAAAAATTTAGAGAAAAAAAAATCAATTCAACTCTATTTTGAAATTGTTTTCAATTAAAACTTCAAACCAATAAATATTGTGTTTAGTTAGATGAACAAAATTTGTGGGTGCATGATATTAAGGATCTCAATTTCACTTCAAAGGGAAAACATGAGGTGTAGTTAATGATATTTTTTTTAATAAACAAATTAGATGGGGGAGGGTTTTATTGTAAATGAAATAAGCTTTTTGTGTTATAAGAACAGCTACTAGACATCTTGGTAAATGATGGTAAATTTGGACATGATTGAAAAATTAGGATAATTGTAATGAGTAGCAATTTTAAGAATAATAACTAAGTATATAACAACATTTTTAAAAAATTGCAAATATAGCAAAGTTTATCAGTGATAGATTTCTATTACTGATAGACTCTTAGGCTTTATCAGTGATAGACCACCTAGACCATAAAAGTCTATCAACGATAGAAGTCTATCACTGATAGACTTTGCTATATTTGCAATTTTTTTAAAATGTTGCTATATGTGCTAATACTTTGAATTTGATTGCTATATTTACAATTGTCCCTTTAAAGACTATGTACATTAGTTAACCCTTAACTATAGGAAAATTGGAACAGATAGGATTTTTTAGTTTTGATTTTTGAGCAATAGGAAAAAAAAGTAACAACAGTGATGATAGCACCTCAGACATCTAATTTACCATGAATTTTTTAATATACCCAGAATACCCTCAGATGAAAATCTCGCTATCTAGATTTAGGACCTGTTAGATTGACTAGAGAGAAAATATATATTTTTTTAAATTCATTTTTATTTAAACTCTTTTGATAAAAATAGTTTAAAATGAACTCTGAAAGTGTTTCAAAAGCTATTTTGAATGGTTGTCAAACACTTCAATTTTTTTTCAAAATGACTTATTTTAAAATTAAACACTTGAAAAGTTAATATAAACATACTCTTAGTTACACTATATCTACTCTTAGTTACACTGTATCTCTTTTTTAGTATTCCAAATTTCTTTTAATCATTTACTTCCTCCCAAGAGAATCTAAATATTATGAGTTTGTTATCTTTTTAAAGTTTAAATATGAAATCTGAGGTAGCATTGTGTGTAATGTTAATTATATGTTGATAATGTTGCAACATTATTGAATGATGCTATAGTACTAAGGTAGCATTGTTGTCTCGTGTGATGGCGATTGATAGGAGTTGGGAGATGAATCTTTTTCTTCATCGGATGCATTTAAATGAACTTTTTAAGTGTTTAGTTTTAAAAATAAGTCATTTTGGAAAGAAAAGAAAGTGTTTGGAAATCCTTCAAAAGTAGCTTTTGAAGTGTATTTTAATTAGATTTTATCAAAAGAGTTTAAATAAAAATATTTTTTTTGAAAAACATTTAATTTTTTTCTTTAATCAATCCAAACAGGCTTGATTAATAAGATATATTTGCATTCAAGTATTTTTCTACTCATGGTATTGGTTGCAAATACAAAATATAGAATTAACACTCCTGTATAGTTACAGGAGAAAAGACACGAAAGATATCTCTATAGATACATACGCAGACGAACCCCAAGAGGTTAGGATAGAAACCACTTTGACTCTCGAAGAATGGCTTGACCTTTTGAAAGAATACAATGATGCCTTTGCATGGTCCTATGATGATATGCCTGGACTCAGCACAGACATAATTTCGAAAAAAATCCCTTTGTATCCTTGATGCCAAGCCAGTCAAGCAGAAACTTTGGAGAATGAGGCCCGAATAGACATTTGAAAATCAAAGAGGAAGTAGAGAAACAAAGTTTTAAGGAAGACTACCGAGCTCCACGATAGATAAGCGCCCATCATCTCTATGCGAATTCTGGCTTTAGCTTTTCGTCTTTGGTTAGTATTAGCGAAAACTCGCTCGACTTAATAATAATTGTCTTACTCGACTTGCTTACTAGCTGCATTTTTGACTAATATAATAATTAGACATATGTTAGTGCGTGGTGCAAAGGCCTACATTTGAGAGGCATTGCCTATAGCACTGATAGCGCATGCACAAGACCTTTTGAATGCACACAAAGAATATCACCATGAAAATGAGACTTTAGAAACTGACTCGTAAGAACAAAATAGTCTCATTACTTAGTTTCACTCATATGTACTCCACTTTCTTAGTGTTTAGATCAAGGTACCCATATTATGTATATAATTTTTCCTCAAGATGCCCCATTTCCCTTTCAGTCAAGCCTTTTTAGCCCTTTCCTCGAGGAGTCGAGCTGCCTATCTTCTCCTCGAGTCGCACTAGCCCGACGATATCGATCTCGACCATTATTTTATGAAATTTTATTCTAACTTCTAGCTTGACTTATCCTTAGCTAAAGAAAGAAAGATAGTTGAAGGTCGAAGACCAGAGTTCGATTTTCACAACATATGAAAAAGACCTACAGGAAGAAGTTTACACGAGTCCTCCCCCCAGTTGTGTAAGGGGAGGAGAACAAGAGAGGTCAACTGGAGTGGAAGCCAAACGACGGGGTTGAGAATCTGTGATTGATCCGAAGAACCACTGCCAGATATGATTTTGCTTCCCCTTCGTACTACCGAGATTCTTGCTCGACTTTCTTTCGACTTAAGAAGGCAGCGGTGAGAATGATGATCACTTCGGAACTCGTTGAGAATGGGCATTTTAGGGCTGGATCTAAAAGCTCTCCAACGTGTTGCGATATATCATTAATTGAGATGTAA

mRNA sequence

ATGAAACTTTTGGTTTTGGCATTGTTGATGGTTATTGAAACAAGCCTTGGAGCTCCATTTGAGCGTTGGAGAGTTGAAGTAGCCAATGAAATGCAAAATGGGCAAACTTTATATCTTCGGTGCAAGTCCAAAGAAGATGATTTGGGAAAGCAATATTTAAAACATGGGCAGAAATTTTCATGGAAATTTAGAGAGAATTTGTGGCAAAATACACTTTATTGGTGCTACATGAGAAATGATCACAATCATGTATCTTTAGAAGTGTTTTGGCCAGAATCAGCTTCTCAGTCTTGGCTTGCTTATAGATGTAGAGATAATGTTTGCTATTGGTCAGCAAGAAATGATGGAATTTACATCTATAATGTTCCTGAAAATAAAACCACTGCCAGATATGATTTTGCTTCCCCTTCGTACTACCGAGATTCTTGCTCGACTTTCTTTCGACTTAAGAAGGCAGCGGTGAGAATGATGATCACTTCGGAACTCGTTGAGAATGGGCATTTTAGGGCTGGATCTAAAAGCTCTCCAACGTGTTGCGATATATCATTAATTGAGATGTAA

Coding sequence (CDS)

ATGAAACTTTTGGTTTTGGCATTGTTGATGGTTATTGAAACAAGCCTTGGAGCTCCATTTGAGCGTTGGAGAGTTGAAGTAGCCAATGAAATGCAAAATGGGCAAACTTTATATCTTCGGTGCAAGTCCAAAGAAGATGATTTGGGAAAGCAATATTTAAAACATGGGCAGAAATTTTCATGGAAATTTAGAGAGAATTTGTGGCAAAATACACTTTATTGGTGCTACATGAGAAATGATCACAATCATGTATCTTTAGAAGTGTTTTGGCCAGAATCAGCTTCTCAGTCTTGGCTTGCTTATAGATGTAGAGATAATGTTTGCTATTGGTCAGCAAGAAATGATGGAATTTACATCTATAATGTTCCTGAAAATAAAACCACTGCCAGATATGATTTTGCTTCCCCTTCGTACTACCGAGATTCTTGCTCGACTTTCTTTCGACTTAAGAAGGCAGCGGTGAGAATGATGATCACTTCGGAACTCGTTGAGAATGGGCATTTTAGGGCTGGATCTAAAAGCTCTCCAACGTGTTGCGATATATCATTAATTGAGATGTAA

Protein sequence

MKLLVLALLMVIETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYNVPENKTTARYDFASPSYYRDSCSTFFRLKKAAVRMMITSELVENGHFRAGSKSSPTCCDISLIEM

Homology

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BLAST of Lsi05G010860 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.0e-26
Identity = 58/122 (47.54%), Postives = 77/122 (63.11%), Query Frame = 1


Query: 5   VLALLMVIETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFR 64
           +LAL      S G  + +W V V N +  G+TL+  CKSK+DDLG++ L  G +F+W F+
Sbjct: 1   ILALSAPCLGSPGIRYNKWHVHVVNNLGAGKTLFAHCKSKDDDLGERNLAPGTEFNWSFK 60

Query: 65  ENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYNVPE 124
           EN +  TLYWCYM  D  H +L+VFW E    SWL YRC    C W A++DGIYI  +PE
Sbjct: 61  ENFFGTTLYWCYMSTDQKHAALDVFWVE-GDHSWLQYRCNWKDCIWIAKDDGIYIKIIPE 120

Query: 125 NK 127
           N+
Sbjct: 121 NR 121

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BLAST of Lsi05G010860 vs. TrEMBL
Match: V4VUI1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022738mg PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.7e-22
Identity = 52/125 (41.60%), Postives = 79/125 (63.20%), Query Frame = 1


Query: 4   LVLALLMVIETSLGA-PFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWK 63
           +++ L + I  S+   P + W V V N + N QTL+L CKSK+DDLG+  L  G + +WK
Sbjct: 11  VIVVLALAIRPSVSPIPTKTWHVHVVNNLSNNQTLFLHCKSKDDDLGEHKLTTGTESNWK 70

Query: 64  FRENLWQNTLYWCYMRNDHNHV-SLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYN 123
           F+EN +Q TL+WC++R   N   + +VFW E   Q    +RCR   C W+A+++GIY+ N
Sbjct: 71  FKENFFQTTLFWCHLRKPDNFCNNFKVFWNEDFFQ----FRCRYKDCIWTAKDEGIYLKN 130

Query: 124 VPENK 127
           +PE +
Sbjct: 131 IPEGR 131

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BLAST of Lsi05G010860 vs. TrEMBL
Match: V4TTV3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.8e-21
Identity = 52/136 (38.24%), Postives = 79/136 (58.09%), Query Frame = 1


Query: 3   LLVLALLMVIETSLGA-PFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSW 62
           ++ + L + I  S+   P + W V V N + N QTL + CKSK+DDLG+  L  G +F+W
Sbjct: 14  VVTVVLALAIRPSVSPIPTKTWHVHVVNNLSNNQTLLVHCKSKDDDLGEHNLAAGTEFAW 73

Query: 63  KFRENLWQNTLYWCYMRNDHNHVSL-EVFWPESASQSWLAYRCRDNVCYWSARNDGIYIY 122
           KF+EN +Q TL+WCY++      ++  VFW E   Q    +RCR   C W A+ +GIY+ 
Sbjct: 74  KFKENFFQTTLFWCYLKKQDKFCNIFNVFWKEDFFQ----FRCRYKNCIWIAKVEGIYLK 133

Query: 123 NVPENKTTARYDFASP 137
           N+PE      +++  P
Sbjct: 134 NIPEGHDELWHEWKQP 145

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BLAST of Lsi05G010860 vs. TrEMBL
Match: A0A0D3DGQ0_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.3e-21
Identity = 47/117 (40.17%), Postives = 72/117 (61.54%), Query Frame = 1


Query: 5   VLALLMVIETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFR 64
           V+A    +   +G     W+V V N +   +TL++ CKSKEDDLG+  L+ G +FSW F 
Sbjct: 23  VVARSATMRDIIGPKISEWQVMVVNGLATSETLFIHCKSKEDDLGEHNLRLGDRFSWNFG 82

Query: 65  ENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYN 122
           EN+  +TL+WCY+  D  H+++EVFW +      L +RC    C W+A+ DG+Y++N
Sbjct: 83  ENMLHSTLFWCYLSKDDGHMNVEVFWDDVI----LFHRCGWKKCVWTAKTDGLYLWN 135

[Close]

BLAST of Lsi05G010860 vs. TrEMBL
Match: Q9FT11_BRANA (BnaC07g41700D protein OS=Brassica napus GN=homologue of SPH PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.3e-21
Identity = 47/117 (40.17%), Postives = 72/117 (61.54%), Query Frame = 1


Query: 5   VLALLMVIETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFR 64
           V+A    +   +G     W+V V N +   +TL++ CKSKEDDLG+  L+ G +FSW F 
Sbjct: 23  VVARSATMRDIIGPKISEWQVMVVNGLATSETLFIHCKSKEDDLGEHNLRLGDRFSWNFG 82

Query: 65  ENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYN 122
           EN+  +TL+WCY+  D  H+++EVFW +      L +RC    C W+A+ DG+Y++N
Sbjct: 83  ENMLHSTLFWCYLSKDDGHMNVEVFWDDVI----LFHRCGWKKCVWTAKTDGLYLWN 135

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BLAST of Lsi05G010860 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 107.5 bits (267), Expect = 9.3e-24
Identity = 46/99 (46.46%), Postives = 67/99 (67.68%), Query Frame = 1


Query: 23  WRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHN 82
           W+V VAN +  G+TL++ CKSKE+DLG   LK   +FSW F EN+  +TL+WCYM  D  
Sbjct: 41  WQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSKDDG 100

Query: 83  HVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYN 122
           H++++VFW +      L +RC    C W+A+NDG+Y++N
Sbjct: 101 HMNVKVFWDDVI----LFHRCDWKNCVWTAKNDGLYLWN 135

[Close]

BLAST of Lsi05G010860 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1)

HSP 1 Score: 106.3 bits (264), Expect = 2.1e-23
Identity = 44/99 (44.44%), Postives = 65/99 (65.66%), Query Frame = 1


Query: 23  WRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHN 82
           W+V V N +  G+TL++ CKSKEDDLG+  LK   +FSW F EN+  +T +WCYM  D+ 
Sbjct: 41  WQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNG 100

Query: 83  HVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYN 122
           H+++ VFW +      L +RC    C W+A+ DG+Y++N
Sbjct: 101 HMNVNVFWDDVI----LFHRCGWKNCIWTAKTDGLYLWN 135

[Close]

BLAST of Lsi05G010860 vs. TAIR10
Match: AT5G04350.1 (AT5G04350.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 64.7 bits (156), Expect = 6.9e-11
Identity = 33/101 (32.67%), Postives = 53/101 (52.48%), Query Frame = 1


Query: 24  RVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHN- 83
           +V ++N++++ + L + C+SK+DDLG+  LK GQ + + F +N+WQ T + C M    N 
Sbjct: 28  KVVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNF 87

Query: 84  -----HVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIY 119
                 V+ E  W ++   S          C W  R DGIY
Sbjct: 88  KHHLDFVAYETSWSKALEAS----------CKWIGREDGIY 118

[Close]

BLAST of Lsi05G010860 vs. TAIR10
Match: AT5G04347.1 (AT5G04347.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10
Identity = 37/113 (32.74%), Postives = 56/113 (49.56%), Query Frame = 1


Query: 27  VANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHN---H 86
           V NE+ N + L +RC+SK+D+LG   L+ GQ     F +N+W+ TL+WC +    +   H
Sbjct: 26  VKNELNN-KVLGVRCRSKDDNLGDHILRVGQMTKNNFDDNVWRRTLFWCNLWKGPDFKLH 85

Query: 87  VSLEVF---WPESASQSWLAYRCRDNVCYWSARNDGIYIYNVPENKTTARYDF 134
           V+ + +   W       +L          W AR DGIY    PE     +YD+
Sbjct: 86  VAFDAYRSQWKADIGPRYL----------WIAREDGIYYTQHPETPPKKKYDW 127

[Close]

BLAST of Lsi05G010860 vs. TAIR10
Match: AT4G16195.1 (AT4G16195.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 60.1 bits (144), Expect = 1.7e-09
Identity = 34/118 (28.81%), Postives = 57/118 (48.31%), Query Frame = 1


Query: 19  PFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMR 78
           P  +  VE+ N++ N  TL   CKSK+DDLG + L+ G+ +S+ F    +  TLY+C   
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query: 79  NDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYNVPENKTTARYDFASP 137
             +   S +++  +    S    +C  + C W  R +G   +    N  T ++D   P
Sbjct: 104 WPNESHSFDIY--KDHRDSGGDNKCESDRCVWKIRRNGPCRF----NDETKQFDLCYP 155

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BLAST of Lsi05G010860 vs. NCBI nr
Match: gi|659093656|ref|XP_008447645.1| (PREDICTED: uncharacterized protein LOC103490052 [Cucumis melo])

HSP 1 Score: 208.8 bits (530), Expect = 8.4e-51
Identity = 97/124 (78.23%), Postives = 105/124 (84.68%), Query Frame = 1


Query: 3   LLVLALLMVIETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWK 62
           L++  LL+VI+TS GAP ERW VE+ NEMQ G TL L CKSK+DDLGKQ LK GQ FSWK
Sbjct: 192 LVITLLLIVIQTSHGAPLERWTVEITNEMQ-GLTLLLHCKSKDDDLGKQILKQGQNFSWK 251

Query: 63  FRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYNV 122
           FRENLWQNTLYWCYM N  NHVSLEVFWPESAS  +LAYRC DNVCYWSARNDGIYIYNV
Sbjct: 252 FRENLWQNTLYWCYMTNGQNHVSLEVFWPESASNPYLAYRCSDNVCYWSARNDGIYIYNV 311

Query: 123 PENK 127
           PE+K
Sbjct: 312 PEHK 314

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BLAST of Lsi05G010860 vs. NCBI nr
Match: gi|659071500|ref|XP_008460139.1| (PREDICTED: uncharacterized protein LOC103499037 [Cucumis melo])

HSP 1 Score: 167.9 bits (424), Expect = 1.6e-38
Identity = 69/117 (58.97%), Postives = 92/117 (78.63%), Query Frame = 1


Query: 11  VIETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQN 70
           ++E S+  P E W V ++N+MQ+ QTL+L CKSK+DDLG+  L   Q FSW+F+ NLWQ 
Sbjct: 1   MVERSIATPLEHWGVRISNDMQSKQTLFLHCKSKDDDLGRLNLGFAQSFSWRFKVNLWQT 60

Query: 71  TLYWCYMR-NDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYNVPENK 127
           TLYWCYMR  + NH++LEVFWPES S+SWL++RC+ N C+WS R+DGIY+ N+PENK
Sbjct: 61  TLYWCYMRKKEPNHIALEVFWPESISKSWLSHRCQGNRCFWSVRDDGIYVKNIPENK 117

[Close]

BLAST of Lsi05G010860 vs. NCBI nr
Match: gi|778689033|ref|XP_004136434.2| (PREDICTED: uncharacterized protein LOC101208376 [Cucumis sativus])

HSP 1 Score: 134.0 bits (336), Expect = 2.6e-28
Identity = 64/124 (51.61%), Postives = 81/124 (65.32%), Query Frame = 1


Query: 4   LVLALLMVIETSLGA--PFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSW 63
           ++LAL+       GA  P   W++ + NEM    TL+L+CKSK+DDLG Q L   Q+FSW
Sbjct: 12  VILALIGECNGQPGAEVPLSSWKINILNEMTK-DTLFLQCKSKDDDLGAQNLGVKQQFSW 71

Query: 64  KFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYN 123
            F+ENLWQ TLYWCYM N  +H S  VFWPE +   WLA+RC+   C WSAR+DGIY+  
Sbjct: 72  SFKENLWQTTLYWCYMHNAESHASFNVFWPEKS--GWLAFRCQLRNCIWSARDDGIYLKT 131

Query: 124 VPEN 126
            P N
Sbjct: 132 NPHN 132

[Close]

BLAST of Lsi05G010860 vs. NCBI nr
Match: gi|659133301|ref|XP_008466659.1| (PREDICTED: uncharacterized protein LOC103504014 [Cucumis melo])

HSP 1 Score: 131.7 bits (330), Expect = 1.3e-27
Identity = 57/107 (53.27%), Postives = 72/107 (67.29%), Query Frame = 1


Query: 19  PFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMR 78
           P   W + V NEM    +L+L CKSK+DDLG + L   Q+FSW F+EN+WQ TLYWCYM 
Sbjct: 29  PLSSWNINVLNEMSK-DSLFLHCKSKDDDLGARNLGIKQQFSWSFKENVWQTTLYWCYMH 88

Query: 79  NDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYNVPEN 126
           N ++H S  VFWPE +   WLA+RC+   C WSAR+DGIY+   P N
Sbjct: 89  NANSHASFNVFWPEKS--GWLAFRCQPRNCIWSARDDGIYLKTNPHN 132

[Close]

BLAST of Lsi05G010860 vs. NCBI nr
Match: gi|659133299|ref|XP_008466658.1| (PREDICTED: uncharacterized protein LOC103504013 [Cucumis melo])

HSP 1 Score: 130.6 bits (327), Expect = 2.9e-27
Identity = 57/101 (56.44%), Postives = 72/101 (71.29%), Query Frame = 1


Query: 19  PFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMR 78
           P   W++ V NEM    +L+L CKSK+DDLG   L   Q+FSW FRENLW+ TLYWCYM 
Sbjct: 29  PLSSWKINVLNEMSK-DSLFLHCKSKDDDLGTHNLGLKQQFSWSFRENLWRTTLYWCYMH 88

Query: 79  NDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYI 120
           N ++H SL VFWPE++   WLA+RC+   C WSAR+DGIY+
Sbjct: 89  NANSHTSLNVFWPETS--GWLAFRCQLRNCIWSARDDGIYL 126

The following BLAST results are available for this feature:

BLAST of Lsi05G010860 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G010860 vs. TrEMBL


Match Name	E-value	Identity	Description
M5VWE5_PRUPE	1.0e-26	47.54	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 S...	[more]
V4VUI1_9ROSI	5.7e-22	41.60	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022738mg PE=4 SV=1	[more]
V4TTV3_9ROSI	4.8e-21	38.24	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1	[more]
A0A0D3DGQ0_BRAOL	6.3e-21	40.17	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]
Q9FT11_BRANA	6.3e-21	40.17	BnaC07g41700D protein OS=Brassica napus GN=homologue of SPH PE=4 SV=1	[more]

BLAST of Lsi05G010860 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G29035.1	9.3e-24	46.46	Plant self-incompatibility protein S1 family	[more]
AT4G16295.1	2.1e-23	44.44	S-protein homologue 1	[more]
AT5G04350.1	6.9e-11	32.67	Plant self-incompatibility protein S1 family	[more]
AT5G04347.1	1.5e-10	32.74	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	1.7e-09	28.81	Plant self-incompatibility protein S1 family	[more]

BLAST of Lsi05G010860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659093656\|ref\|XP_008447645.1\|	8.4e-51	78.23	PREDICTED: uncharacterized protein LOC103490052 [Cucumis melo]	[more]
gi\|659071500\|ref\|XP_008460139.1\|	1.6e-38	58.97	PREDICTED: uncharacterized protein LOC103499037 [Cucumis melo]	[more]
gi\|778689033\|ref\|XP_004136434.2\|	2.6e-28	51.61	PREDICTED: uncharacterized protein LOC101208376 [Cucumis sativus]	[more]
gi\|659133301\|ref\|XP_008466659.1\|	1.3e-27	53.27	PREDICTED: uncharacterized protein LOC103504014 [Cucumis melo]	[more]
gi\|659133299\|ref\|XP_008466658.1\|	2.9e-27	56.44	PREDICTED: uncharacterized protein LOC103504013 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010264	Self-incomp_S1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G010860.1	Lsi05G010860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 24..132 score: 9.5
None	No IPR available	unknown	Coil	Coil	coord: 183..186 scor
None	No IPR available	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 3..139 score: 7.7
None	No IPR available	PANTHER	PTHR31232:SF2	GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MDJ14-RELATED	coord: 3..139 score: 7.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G010860	Csa3G623980	Cucumber (Chinese Long) v2	culsiB200
Lsi05G010860	CSPI03G27180	Wild cucumber (PI 183967)	cpilsiB199
Lsi05G010860	Cucsa.140370	Cucumber (Gy14) v1	cgylsiB225
Lsi05G010860	ClCG07G001680	Watermelon (Charleston Gray)	lsiwcgB348
Lsi05G010860	Cla97C09G172110	Watermelon (97103) v2	lsiwmbB355
Lsi05G010860	Cla97C07G129940	Watermelon (97103) v2	lsiwmbB346
Lsi05G010860	Bhi05G000084	Wax gourd	lsiwgoB459
Lsi05G010860	CsaV3_3G028660	Cucumber (Chinese Long) v3	cuclsiB219

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Lsi05G010860	Lsi02G020530	Bottle gourd (USVL1VR-Ls)	lsilsiB106

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G010860	Melon (DHL92) v3.6.1	lsimedB398
Lsi05G010860	Silver-seed gourd	carlsiB066
Lsi05G010860	Silver-seed gourd	carlsiB717
Lsi05G010860	Silver-seed gourd	carlsiB879
Lsi05G010860	Cucumber (Chinese Long) v3	cuclsiB234
Lsi05G010860	Cucumber (Chinese Long) v3	cuclsiB560
Lsi05G010860	Watermelon (97103) v2	lsiwmbB335
Lsi05G010860	Bottle gourd (USVL1VR-Ls)	lsilsiB156
Lsi05G010860	Cucumber (Gy14) v1	cgylsiB082
Lsi05G010860	Cucumber (Gy14) v1	cgylsiB417
Lsi05G010860	Cucurbita maxima (Rimu)	cmalsiB247
Lsi05G010860	Cucurbita maxima (Rimu)	cmalsiB486
Lsi05G010860	Cucurbita maxima (Rimu)	cmalsiB585
Lsi05G010860	Cucurbita maxima (Rimu)	cmalsiB769
Lsi05G010860	Cucurbita maxima (Rimu)	cmalsiB837
Lsi05G010860	Cucurbita moschata (Rifu)	cmolsiB235
Lsi05G010860	Cucurbita moschata (Rifu)	cmolsiB470
Lsi05G010860	Cucurbita moschata (Rifu)	cmolsiB565
Lsi05G010860	Cucurbita moschata (Rifu)	cmolsiB761
Lsi05G010860	Cucurbita moschata (Rifu)	cmolsiB821
Lsi05G010860	Cucurbita pepo (Zucchini)	cpelsiB209
Lsi05G010860	Cucurbita pepo (Zucchini)	cpelsiB270
Lsi05G010860	Cucurbita pepo (Zucchini)	cpelsiB616
Lsi05G010860	Cucurbita pepo (Zucchini)	cpelsiB716
Lsi05G010860	Wild cucumber (PI 183967)	cpilsiB213
Lsi05G010860	Cucumber (Chinese Long) v2	culsiB215
Lsi05G010860	Cucumber (Chinese Long) v2	culsiB526
Lsi05G010860	Melon (DHL92) v3.5.1	lsimeB356
Lsi05G010860	Melon (DHL92) v3.5.1	lsimeB382
Lsi05G010860	Watermelon (Charleston Gray)	lsiwcgB317
Lsi05G010860	Watermelon (Charleston Gray)	lsiwcgB337
Lsi05G010860	Watermelon (97103) v1	lsiwmB357
Lsi05G010860	Watermelon (97103) v1	lsiwmB367
Lsi05G010860	Cucumber (Gy14) v2	cgyblsiB185
Lsi05G010860	Cucumber (Gy14) v2	cgyblsiB204
Lsi05G010860	Cucumber (Gy14) v2	cgyblsiB494