Lsi05G010780 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G010780
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Plant self-incompatibility protein S1 family
Location	chr05 : 18367814 .. 18368757 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGTGAGATTAAAATTTTCCATATAAAAACTTCATATGATTATATATAAATGGTTCATATTCAAGCTTGAAAAATGAAAAACATAAAAAAAAAAATTCTTCAAAGCCAAAAATGAAAGCTATGAATAGTGTTTGTGCGATTTTGCTATTTGTGATTGCATCAACTTGTAATGTCAAAACTTGTTTAGCAGCATATTCCAAGAACGACCAAGTTCCTGGATCATCTTGGAAAGTCACGATTCTTAACCATCAGAAATATGCAACTCTAACGGTTCATTGCAAGTCCAAAGACAATGATTTAGGTAAGTGTACGGATTCTCAATTTTTTTTCTTTTAGTTCAACAACATGTCAATGGAGATTTTTTAAAGTTGTGTTCATCAATATTTGAGAGTGACTTTGAAATTGTTAAATCACGTTTGTCATGTTCAAAATCATTTTAGAACACATCTTTAATCACTCAAAATTAATTTAATATTTCATATTACACTTTTCATATCACAAAACTAATTTTGAGTGATTAAAAGCATATCTAGGAGTGATTTTAAAAATGTCAAATTTGATTATAACCATTTCAGAATCACTCTTAAATAGGCGTAATTATGGATATATATTGATTTTTTTTTCTTTATATTGAAATTTTGATCCCCATACTAAACTAAAAGTTCTTAAATAGGCGTGCATGTCCTTAACTTCAAAGGCGTATATGACTGGCAATTCAAGGAGAATTTGTTGCAGACAACATTGTTTTGGTGCAACTTTAATAGCAGCAAATATGGGCATGCTTCGTTCGAGGTCTTCTGGCCAGAGAACGGGACGTGGCTTTCCGATCGTTGCAACGATAGAAACTGTATTTGGGTTGCTGATGAAAAGGGTTTTTCCTTGTTTAATATTTCTCAACAAAATTACGAGTTCCAACATCCGTGGACGCCTGGTAGCTAA

mRNA sequence

ATGGAAACATATTCCAAGAACGACCAAGTTCCTGGATCATCTTGGAAAGTCACGATTCTTAACCATCAGAAATATGCAACTCTAACGGTTCATTGCAAGTCCAAAGACAATGATTTAGGCGTGCATGTCCTTAACTTCAAAGGCGTATATGACTGGCAATTCAAGGAGAATTTGTTGCAGACAACATTGTTTTGGTGCAACTTTAATAGCAGCAAATATGGGCATGCTTCGTTCGAGGTCTTCTGGCCAGAGAACGGGACGTGGCTTTCCGATCGTTGCAACGATAGAAACTGTATTTGGGTTGCTGATGAAAAGGGTTTTTCCTTGTTTAATATTTCTCAACAAAATTACGAGTTCCAACATCCGTGGACGCCTGGTAGCTAA

Coding sequence (CDS)

ATGGAAACATATTCCAAGAACGACCAAGTTCCTGGATCATCTTGGAAAGTCACGATTCTTAACCATCAGAAATATGCAACTCTAACGGTTCATTGCAAGTCCAAAGACAATGATTTAGGCGTGCATGTCCTTAACTTCAAAGGCGTATATGACTGGCAATTCAAGGAGAATTTGTTGCAGACAACATTGTTTTGGTGCAACTTTAATAGCAGCAAATATGGGCATGCTTCGTTCGAGGTCTTCTGGCCAGAGAACGGGACGTGGCTTTCCGATCGTTGCAACGATAGAAACTGTATTTGGGTTGCTGATGAAAAGGGTTTTTCCTTGTTTAATATTTCTCAACAAAATTACGAGTTCCAACATCCGTGGACGCCTGGTAGCTAA

Protein sequence

METYSKNDQVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPWTPGS

Homology

[Close]

BLAST of Lsi05G010780 vs. TrEMBL
Match: A0A0A0KA40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G007430 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.1e-36
Identity = 73/117 (62.39%), Postives = 87/117 (74.36%), Query Frame = 1


Query: 9   QVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGV-YDWQFKENLLQTTLFWCN 68
           Q+P + W VTI+N+Q  A+L VHCKSKD+DLGVHV+  +G  Y W FKEN LQTT +WC+
Sbjct: 32  QLPLTDWTVTIINYQINASLQVHCKSKDDDLGVHVIQNEGEHYSWGFKENWLQTTKYWCD 91

Query: 69  FNSSKYGHASFEVFWPENGTWLSDRC-NDRNCIWVADEKGFSLFNISQQNYEFQHPW 124
           F  SK GHASFEVFWPE GTW SDRC ++ NC+WVA   GFSL N   +  EFQHPW
Sbjct: 92  F-QSKLGHASFEVFWPERGTWFSDRCGSNSNCVWVAAHDGFSLLNAPAKTLEFQHPW 147

[Close]

BLAST of Lsi05G010780 vs. TrEMBL
Match: M5VN50_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024219mg PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-19
Identity = 47/103 (45.63%), Postives = 64/103 (62.14%), Query Frame = 1


Query: 27  TLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPEN- 86
           TL  HCKSKD+DLG+  +     ++W FKEN   TTLFWCN +++ + HA+F+VFW E+ 
Sbjct: 6   TLVAHCKSKDDDLGIRDVLPGNEFNWGFKENFGGTTLFWCNIHNN-HQHANFQVFWHEDE 65

Query: 87  --GTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPWTPG 127
              +WL  RCN + C WVA + G  + N  +   E QH W PG
Sbjct: 66  SKSSWLHYRCNWKECFWVAKDDGIYIRNTPEGRDELQHQWEPG 107

[Close]

BLAST of Lsi05G010780 vs. TrEMBL
Match: A0A061DVJ1_THECC (S-protein, putative OS=Theobroma cacao GN=TCM_003118 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.1e-19
Identity = 52/116 (44.83%), Postives = 70/116 (60.34%), Query Frame = 1


Query: 14  SWKVTILN---HQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNS 73
           +W +  +N   H+K   L +HCKS DNDLG+H L     ++W+FK  +L  TLFWC + +
Sbjct: 42  TWHIHAVNGMSHEKI--LFLHCKSGDNDLGIHNLTAGTEFNWKFKPQILGKTLFWC-YMA 101

Query: 74  SKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPWTPG 127
               HASF+VFW +N   L  RCN +NCIW A + G  L NI +   EF+H W PG
Sbjct: 102 WGNVHASFKVFWDDND--LFYRCNWKNCIWTAKDDGVYLKNIPENYDEFRHKWEPG 152

[Close]

BLAST of Lsi05G010780 vs. TrEMBL
Match: V4TTV3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-18
Identity = 49/115 (42.61%), Postives = 64/115 (55.65%), Query Frame = 1


Query: 10  VPGSSWKVTILNH-QKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNF 69
           +P  +W V ++N+     TL VHCKSKD+DLG H L     + W+FKEN  QTTLFWC  
Sbjct: 30  IPTKTWHVHVVNNLSNNQTLLVHCKSKDDDLGEHNLAAGTEFAWKFKENFFQTTLFWCYL 89

Query: 70  NSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPW 124
                    F VFW E+  +   RC  +NCIW+A  +G  L NI + + E  H W
Sbjct: 90  KKQDKFCNIFNVFWKED--FFQFRCRYKNCIWIAKVEGIYLKNIPEGHDELWHEW 142

[Close]

BLAST of Lsi05G010780 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.9e-18
Identity = 47/113 (41.59%), Postives = 67/113 (59.29%), Query Frame = 1


Query: 13  SSWKVTILNHQKYA-TLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSS 72
           + W V ++N+     TL  HCKSKD+DLG   L     ++W FKEN   TTL+WC + S+
Sbjct: 17  NKWHVHVVNNLGAGKTLFAHCKSKDDDLGERNLAPGTEFNWSFKENFFGTTLYWC-YMST 76

Query: 73  KYGHASFEVFWPE-NGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPW 124
              HA+ +VFW E + +WL  RCN ++CIW+A + G  +  I +   EF H W
Sbjct: 77  DQKHAALDVFWVEGDHSWLQYRCNWKDCIWIAKDDGIYIKIIPENRDEFSHKW 128

[Close]

BLAST of Lsi05G010780 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1)

HSP 1 Score: 92.0 bits (227), Expect = 2.8e-19
Identity = 45/115 (39.13%), Postives = 60/115 (52.17%), Query Frame = 1


Query: 13  SSWKVTILNHQKYA-TLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSS 72
           S W+VT++N      TL +HCKSK++DLG   L F+  + W F EN+L +T FWC  N  
Sbjct: 39  SEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKD 98

Query: 73  KYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPWTPG 127
             GH +  VFW +    L  RC  +NCIW A   G  L+N +         W  G
Sbjct: 99  N-GHMNVNVFWDD--VILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEVG 150

[Close]

BLAST of Lsi05G010780 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 91.7 bits (226), Expect = 3.6e-19
Identity = 49/127 (38.58%), Postives = 69/127 (54.33%), Query Frame = 1


Query: 2   ETYSKNDQVPG-SSWKVTILNHQKYA-TLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLL 61
           +T +++  VP  S W+VT+ N      TL +HCKSK+NDLG   L F   + W F EN+L
Sbjct: 27  DTTTRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENML 86

Query: 62  QTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEF 121
            +TLFWC + S   GH + +VFW +    L  RC+ +NC+W A   G  L+N +      
Sbjct: 87  HSTLFWC-YMSKDDGHMNVKVFWDD--VILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVL 146

Query: 122 QHPWTPG 127
              W  G
Sbjct: 147 SEKWKSG 150

[Close]

BLAST of Lsi05G010780 vs. TAIR10
Match: AT5G06020.1 (AT5G06020.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 65.9 bits (159), Expect = 2.1e-11
Identity = 38/115 (33.04%), Postives = 61/115 (53.04%), Query Frame = 1


Query: 2   ETYSKNDQ---VPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENL 61
           ET+ ++ +   + G   ++T+ N+  Y  L +HCKSKD+DLG H+     +Y W+F  N 
Sbjct: 31  ETFQQDGEPFPIRGPLTRITVKNNNDYL-LGIHCKSKDDDLGFHIHKEGELYGWKFHVNF 90

Query: 62  LQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNIS 114
             +TL++C F+  +     F++   E   +   RC  RNC W A  K  SL+  S
Sbjct: 91  QNSTLYFCGFSQGQDNKGVFDIDRAERDFY---RC--RNCTWNA--KKDSLYGYS 137

[Close]

BLAST of Lsi05G010780 vs. TAIR10
Match: AT5G06030.1 (AT5G06030.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 64.7 bits (156), Expect = 4.7e-11
Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = 1


Query: 12  GSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSS 71
           G   +VTI N+  Y  L +HCKS+D+DLG H+L    ++ W+F  N   +TL +C F+  
Sbjct: 43  GHLTRVTIQNYNDYL-LAIHCKSRDDDLGFHILAKGELFGWKFHVNFRYSTLCFCGFSQR 102

Query: 72  KYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGF 108
           +     F ++      +   RC   NC W A++ GF
Sbjct: 103 QINKGVFIIYVASRDFY---RC--ANCTWKAEKDGF 132

[Close]

BLAST of Lsi05G010780 vs. TAIR10
Match: AT4G16195.1 (AT4G16195.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 63.2 bits (152), Expect = 1.4e-10
Identity = 35/120 (29.17%), Postives = 53/120 (44.17%), Query Frame = 1


Query: 5   SKNDQVPGSSWKVTILNHQ-KYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTL 64
           S N   P S   V I N      TL  HCKSKD+DLG   L     + + F       TL
Sbjct: 38  STNSVFPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTL 97

Query: 65  FWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPW 124
           ++C+F+     H SF+++     +   ++C    C+W     G   FN   + ++  +PW
Sbjct: 98  YFCSFSWPNESH-SFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Lsi05G010780 vs. NCBI nr
Match: gi|659117571|ref|XP_008458671.1| (PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo])

HSP 1 Score: 168.3 bits (425), Expect = 8.6e-39
Identity = 75/116 (64.66%), Postives = 89/116 (76.72%), Query Frame = 1


Query: 9   QVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGV-YDWQFKENLLQTTLFWCN 68
           Q+P + W+VTI+N+Q  A+L VHCKSKD+DLGVHV+  +G  Y W FKEN LQTT FWCN
Sbjct: 32  QLPLTDWQVTIINYQINASLEVHCKSKDDDLGVHVIQNEGERYSWGFKENWLQTTKFWCN 91

Query: 69  FNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPW 124
           F S + GHASFEVFWPE GTWLSDRC++ NC+WVA   GFSL N   +  EFQHPW
Sbjct: 92  FQS-RLGHASFEVFWPETGTWLSDRCSNSNCVWVASNDGFSLLNGPAKTLEFQHPW 146

[Close]

BLAST of Lsi05G010780 vs. NCBI nr
Match: gi|778709234|ref|XP_011656368.1| (PREDICTED: uncharacterized protein LOC105435729 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 3.0e-36
Identity = 73/117 (62.39%), Postives = 87/117 (74.36%), Query Frame = 1


Query: 9   QVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGV-YDWQFKENLLQTTLFWCN 68
           Q+P + W VTI+N+Q  A+L VHCKSKD+DLGVHV+  +G  Y W FKEN LQTT +WC+
Sbjct: 32  QLPLTDWTVTIINYQINASLQVHCKSKDDDLGVHVIQNEGEHYSWGFKENWLQTTKYWCD 91

Query: 69  FNSSKYGHASFEVFWPENGTWLSDRC-NDRNCIWVADEKGFSLFNISQQNYEFQHPW 124
           F  SK GHASFEVFWPE GTW SDRC ++ NC+WVA   GFSL N   +  EFQHPW
Sbjct: 92  F-QSKLGHASFEVFWPERGTWFSDRCGSNSNCVWVAAHDGFSLLNAPAKTLEFQHPW 147

[Close]

BLAST of Lsi05G010780 vs. NCBI nr
Match: gi|659125766|ref|XP_008462850.1| (PREDICTED: uncharacterized protein LOC103501130 [Cucumis melo])

HSP 1 Score: 140.6 bits (353), Expect = 1.9e-30
Identity = 62/112 (55.36%), Postives = 72/112 (64.29%), Query Frame = 1


Query: 12  GSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSS 71
           GS W V+I N QK   L  HCKSKD+DLG  +++  G Y W FKEN  QTTLFWC+F SS
Sbjct: 36  GSKWVVSIHNFQKNDLLLAHCKSKDDDLGAQIIDINGQYSWTFKENFWQTTLFWCDF-SS 95

Query: 72  KYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPW 124
             GHASF+VFWPE G WL  RC+  NC W A   GF L NI +  +E  H W
Sbjct: 96  LNGHASFQVFWPEKGDWLEYRCDHGNCTWAATNDGFFLANIPEGRFELMHYW 146

[Close]

BLAST of Lsi05G010780 vs. NCBI nr
Match: gi|449437310|ref|XP_004136435.1| (PREDICTED: uncharacterized protein LOC101208617 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 5.2e-28
Identity = 60/118 (50.85%), Postives = 73/118 (61.86%), Query Frame = 1


Query: 9   QVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNF 68
           +VP SSWKV ILN     +L + CKSKD+DLG   L  K  + W FKENL QTTL+WC  
Sbjct: 27  EVPLSSWKVNILNEMTKDSLFIRCKSKDDDLGAQNLGVKQQFSWSFKENLWQTTLYWCYM 86

Query: 69  NSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPWTPG 127
           +++K  HASF V+WPE   WL+ RC  RNCIW A + G  L   +   YE  H W PG
Sbjct: 87  HNAK-SHASFNVYWPERSGWLAFRCQLRNCIWSARDDGIYLKTNTHNTYELIHTWEPG 143

[Close]

BLAST of Lsi05G010780 vs. NCBI nr
Match: gi|659093660|ref|XP_008447647.1| (PREDICTED: uncharacterized protein LOC103490054 [Cucumis melo])

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-27
Identity = 56/109 (51.38%), Postives = 74/109 (67.89%), Query Frame = 1


Query: 17  VTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHA 76
           +TI+N Q   TL VHCKSKD+DLG H+++    Y+W+F+EN   TTLFWCNF  +K+ HA
Sbjct: 3   ITIMNWQSNDTLLVHCKSKDDDLGEHIIDMGKEYEWKFRENFSGTTLFWCNFR-NKHKHA 62

Query: 77  SFEVFWPE--NGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPW 124
           +FEVFW E  + +WL D C D NC+W     GF L++ SQ  +EF H W
Sbjct: 63  TFEVFWRESRSKSWLEDHCKDSNCLWTVKSTGFYLYDSSQNKFEFIHEW 110

The following BLAST results are available for this feature:

BLAST of Lsi05G010780 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G010780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA40_CUCSA	2.1e-36	62.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G007430 PE=4 SV=1	[more]
M5VN50_PRUPE	1.1e-19	45.63	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024219mg PE=4 SV=1	[more]
A0A061DVJ1_THECC	3.1e-19	44.83	S-protein, putative OS=Theobroma cacao GN=TCM_003118 PE=4 SV=1	[more]
V4TTV3_9ROSI	1.2e-18	42.61	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1	[more]
M5VWE5_PRUPE	9.9e-18	41.59	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 S...	[more]

BLAST of Lsi05G010780 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16295.1	2.8e-19	39.13	S-protein homologue 1	[more]
AT4G29035.1	3.6e-19	38.58	Plant self-incompatibility protein S1 family	[more]
AT5G06020.1	2.1e-11	33.04	Plant self-incompatibility protein S1 family	[more]
AT5G06030.1	4.7e-11	34.38	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	1.4e-10	29.17	Plant self-incompatibility protein S1 family	[more]

BLAST of Lsi05G010780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117571\|ref\|XP_008458671.1\|	8.6e-39	64.66	PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo]	[more]
gi\|778709234\|ref\|XP_011656368.1\|	3.0e-36	62.39	PREDICTED: uncharacterized protein LOC105435729 [Cucumis sativus]	[more]
gi\|659125766\|ref\|XP_008462850.1\|	1.9e-30	55.36	PREDICTED: uncharacterized protein LOC103501130 [Cucumis melo]	[more]
gi\|449437310\|ref\|XP_004136435.1\|	5.2e-28	50.85	PREDICTED: uncharacterized protein LOC101208617 [Cucumis sativus]	[more]
gi\|659093660\|ref\|XP_008447647.1\|	1.2e-27	51.38	PREDICTED: uncharacterized protein LOC103490054 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010264	Self-incomp_S1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G010780.1	Lsi05G010780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 17..123 score: 5.3
None	No IPR available	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 4..125 score: 2.4
None	No IPR available	PANTHER	PTHR31232:SF2	GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MDJ14-RELATED	coord: 4..125 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G010780	Bottle gourd (USVL1VR-Ls)	lsilsiB106
Lsi05G010780	Bottle gourd (USVL1VR-Ls)	lsilsiB156
Lsi05G010780	Cucumber (Gy14) v1	cgylsiB082
Lsi05G010780	Cucumber (Gy14) v1	cgylsiB225
Lsi05G010780	Cucumber (Gy14) v1	cgylsiB417
Lsi05G010780	Cucurbita maxima (Rimu)	cmalsiB247
Lsi05G010780	Cucurbita maxima (Rimu)	cmalsiB486
Lsi05G010780	Cucurbita maxima (Rimu)	cmalsiB585
Lsi05G010780	Cucurbita maxima (Rimu)	cmalsiB769
Lsi05G010780	Cucurbita maxima (Rimu)	cmalsiB837
Lsi05G010780	Cucurbita moschata (Rifu)	cmolsiB235
Lsi05G010780	Cucurbita moschata (Rifu)	cmolsiB470
Lsi05G010780	Cucurbita moschata (Rifu)	cmolsiB565
Lsi05G010780	Cucurbita moschata (Rifu)	cmolsiB761
Lsi05G010780	Cucurbita moschata (Rifu)	cmolsiB821
Lsi05G010780	Cucurbita pepo (Zucchini)	cpelsiB209
Lsi05G010780	Cucurbita pepo (Zucchini)	cpelsiB270
Lsi05G010780	Cucurbita pepo (Zucchini)	cpelsiB616
Lsi05G010780	Cucurbita pepo (Zucchini)	cpelsiB716
Lsi05G010780	Wild cucumber (PI 183967)	cpilsiB199
Lsi05G010780	Wild cucumber (PI 183967)	cpilsiB213
Lsi05G010780	Cucumber (Chinese Long) v2	culsiB200
Lsi05G010780	Cucumber (Chinese Long) v2	culsiB215
Lsi05G010780	Cucumber (Chinese Long) v2	culsiB526
Lsi05G010780	Melon (DHL92) v3.5.1	lsimeB356
Lsi05G010780	Melon (DHL92) v3.5.1	lsimeB382
Lsi05G010780	Watermelon (Charleston Gray)	lsiwcgB317
Lsi05G010780	Watermelon (Charleston Gray)	lsiwcgB337
Lsi05G010780	Watermelon (Charleston Gray)	lsiwcgB348
Lsi05G010780	Watermelon (97103) v1	lsiwmB357
Lsi05G010780	Watermelon (97103) v1	lsiwmB367
Lsi05G010780	Cucumber (Gy14) v2	cgyblsiB185
Lsi05G010780	Cucumber (Gy14) v2	cgyblsiB204
Lsi05G010780	Cucumber (Gy14) v2	cgyblsiB494
Lsi05G010780	Melon (DHL92) v3.6.1	lsimedB398
Lsi05G010780	Silver-seed gourd	carlsiB066
Lsi05G010780	Silver-seed gourd	carlsiB717
Lsi05G010780	Silver-seed gourd	carlsiB879
Lsi05G010780	Cucumber (Chinese Long) v3	cuclsiB219
Lsi05G010780	Cucumber (Chinese Long) v3	cuclsiB234
Lsi05G010780	Cucumber (Chinese Long) v3	cuclsiB560
Lsi05G010780	Watermelon (97103) v2	lsiwmbB335
Lsi05G010780	Watermelon (97103) v2	lsiwmbB346
Lsi05G010780	Watermelon (97103) v2	lsiwmbB355
Lsi05G010780	Wax gourd	lsiwgoB459