Lsi05G008350 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G008350
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Phloem filament protein
Location	chr05 : 13618688 .. 13619516 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAGTAGTCATCAATATAATAACTTTTGTTTTAAAATGAATTAGATAACACTCAAAATCTTTTAAAAAGTTTTGAACTTATCTCATAGAAGGTAAAAGTAGAGCATATATTGATACCCAAAGCTTGTATAAATATAGAGCATCAAAAGGGAAGAAGCATCACCAACAAAACTTACTTTCTCTAAATAAGCTGAAGGATATATCAAAGAGGAGAGATAGCAAGATGAGTTGTGAGCCACAGGGCAAGTGGATCCCAGTCCCTGATATATCAACACCCTGCGTGAAAGATGTTGCAAACTATGCAGTGACTGAGCACAACAATCAAACTGGAGATAATCTGACATTTAAGAGAGTTATAGCAGGATCATATTTGGAGTTGGACGATGACAAAATAAAGCATCGTTTATATATTGAAACAACAAACAGTAATGGCGATGTAGTTATAAATGAAGCGGTGGTGTTAGTGGAAGAAAATGATGGGAACAGGGTGAGGACTCTCATTTCTTTTGATCAAGTGTTTCCGGATGAGAAGGATCCATTAATATTTTGGAAGGAAATTCCTGACGTTGGTAAGGATAGTGTGCAAGAACTTTCAAAGTTTGCGGTGCAACAAAATAACGTGGATACTAATGATAATCTCAAGTATGTTTCAACTACTAAAGGTTGGTATTATGAGGTAAATCCAAACACTACAAAGTACGATCTCCGTCTTAAGGCGAAGGATTGCTTGTGGCGTGTGCGCGACTATGAGGCCAGGGTACTCGAAGAAAACGCTGGGGAAATTCGAACACTCGAATCTTTCAAACTTAACCCAAGGAAATGGTGA

mRNA sequence

ATGAAAAAAGGTAAAAGTAGAGCATATATTGATACCCAAAGCTTGTATAAATATAGAGCATCAAAAGGGAAGAAGCATCACCAACAAAACTTACTTTCTCTAAATAAGCTGAAGGATATATCAAAGAGGAGAGATAGCAAGATGAGTTGTGAGCCACAGGGCAAGTGGATCCCAGTCCCTGATATATCAACACCCTGCGTGAAAGATGTTGCAAACTATGCAGTGACTGAGCACAACAATCAAACTGGAGATAATCTGACATTTAAGAGAGTTATAGCAGGATCATATTTGGAGTTGGACGATGACAAAATAAAGCATCGTTTATATATTGAAACAACAAACAGTAATGGCGATGTAGTTATAAATGAAGCGGTGGTGTTAGTGGAAGAAAATGATGGGAACAGGGTGAGGACTCTCATTTCTTTTGATCAAGTGTTTCCGGATGAGAAGGATCCATTAATATTTTGGAAGGAAATTCCTGACGTTGGTAAGGATAGTGTGCAAGAACTTTCAAAGTTTGCGGTGCAACAAAATAACGTGGATACTAATGATAATCTCAAGTATGTTTCAACTACTAAAGGTTGGTATTATGAGGTAAATCCAAACACTACAAAGTACGATCTCCGTCTTAAGGCGAAGGATTGCTTGTGGCGTGTGCGCGACTATGAGGCCAGGGTACTCGAAGAAAACGCTGGGGAAATTCGAACACTCGAATCTTTCAAACTTAACCCAAGGAAATGGTGA

Coding sequence (CDS)

ATGAAAAAAGGTAAAAGTAGAGCATATATTGATACCCAAAGCTTGTATAAATATAGAGCATCAAAAGGGAAGAAGCATCACCAACAAAACTTACTTTCTCTAAATAAGCTGAAGGATATATCAAAGAGGAGAGATAGCAAGATGAGTTGTGAGCCACAGGGCAAGTGGATCCCAGTCCCTGATATATCAACACCCTGCGTGAAAGATGTTGCAAACTATGCAGTGACTGAGCACAACAATCAAACTGGAGATAATCTGACATTTAAGAGAGTTATAGCAGGATCATATTTGGAGTTGGACGATGACAAAATAAAGCATCGTTTATATATTGAAACAACAAACAGTAATGGCGATGTAGTTATAAATGAAGCGGTGGTGTTAGTGGAAGAAAATGATGGGAACAGGGTGAGGACTCTCATTTCTTTTGATCAAGTGTTTCCGGATGAGAAGGATCCATTAATATTTTGGAAGGAAATTCCTGACGTTGGTAAGGATAGTGTGCAAGAACTTTCAAAGTTTGCGGTGCAACAAAATAACGTGGATACTAATGATAATCTCAAGTATGTTTCAACTACTAAAGGTTGGTATTATGAGGTAAATCCAAACACTACAAAGTACGATCTCCGTCTTAAGGCGAAGGATTGCTTGTGGCGTGTGCGCGACTATGAGGCCAGGGTACTCGAAGAAAACGCTGGGGAAATTCGAACACTCGAATCTTTCAAACTTAACCCAAGGAAATGGTGA

Protein sequence

MKKGKSRAYIDTQSLYKYRASKGKKHHQQNLLSLNKLKDISKRRDSKMSCEPQGKWIPVPDISTPCVKDVANYAVTEHNNQTGDNLTFKRVIAGSYLELDDDKIKHRLYIETTNSNGDVVINEAVVLVEENDGNRVRTLISFDQVFPDEKDPLIFWKEIPDVGKDSVQELSKFAVQQNNVDTNDNLKYVSTTKGWYYEVNPNTTKYDLRLKAKDCLWRVRDYEARVLEENAGEIRTLESFKLNPRKW

Homology

[Close]

BLAST of Lsi05G008350 vs. TrEMBL
Match: A0A0A0K3W6_CUCSA (Phloem filament protein OS=Cucumis sativus GN=Csa_7G222880 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.7e-48
Identity = 103/202 (50.99%), Postives = 137/202 (67.82%), Query Frame = 1


Query: 48  MSCEPQGKWIPVPDISTPCVKDVANYAVTEHNNQTGDNLTFKRVIAGSYLELDDDKIKHR 107
           MSC+ +  WI +PD +TPCV +VA   V +HN  +GD+L +KRVI G + E+DD  IKHR
Sbjct: 1   MSCDSKKTWIKIPDCTTPCVNEVAKDGVNQHNKASGDSLVYKRVIVGWFWEIDDHAIKHR 60

Query: 108 LYIETTNSNGDVVINEAVVLVEENDGNRVRTLISFDQVFPDEKDPLIFWKEIPDVGKDSV 167
           L IE   S G V+I E +++V + DG RVRTLISF   + DEK+PLIFW +IPDV K  V
Sbjct: 61  LIIEVVTSKGVVLIYELIIVVVQKDGKRVRTLISFLPGYLDEKNPLIFWIKIPDVKKSCV 120

Query: 168 QELSKFAVQQNNVDTNDNLKYVSTTKGWYYEVNPNTTKYDLRLKAKDCLWRVRDYEARVL 227
           Q+ +K+AV ++N  T+D L Y ST +GWY+EVNP    + L +KAK+C+ RVRDY A V 
Sbjct: 121 QDCAKWAVTEHNKITHDYLAYDSTVEGWYHEVNPFVIIFKLHIKAKECIGRVRDYIAVVK 180

Query: 228 EEN--AGEIRTLESFKL-NPRK 247
           EE     +I+ LE F L  P+K
Sbjct: 181 EEKPLTEKIKKLEDFYLIRPKK 202

[Close]

BLAST of Lsi05G008350 vs. TrEMBL
Match: A0A0A0LYF4_CUCSA (Phloem filament protein OS=Cucumis sativus GN=Csa_1G710160 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.3e-41
Identity = 96/199 (48.24%), Postives = 133/199 (66.83%), Query Frame = 1


Query: 48  MSCEPQGKWIPVPDISTPCVKDVANYAVTEHNNQTGDNLTFKRVIAGSYLELDDDKIKHR 107
           MSC  +G+W  +P  +TPCV D+AN+AVTEHN +TG+ LT K VI G +LEL D K+K R
Sbjct: 1   MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFR 60

Query: 108 LYIETTNSNGDVVINEAVVLVEE-NDGNRVRTLISFDQVFPDEKDPLIFWKEIPDVGKDS 167
           LYI   N  G V+  EAVV V E  D  RV+ L+SF+  + DEKD  +FW  I D     
Sbjct: 61  LYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKD--VFWIVIVDTKASC 120

Query: 168 VQELSKFAVQQNNVDTNDNLKYVSTTKGWYYEVNP-NTTKYDLRLKAKDCLWRVRDYEAR 227
           VQ+++KFAV ++N D +D+L Y+S TKGWY E++P N   +++ L  KDC  RVR+++A 
Sbjct: 121 VQDVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKAL 180

Query: 228 VLEE--NAGEIRTLESFKL 243
           VLE+     +IRTL+ F++
Sbjct: 181 VLEDKPQKEKIRTLKYFEV 197

[Close]

BLAST of Lsi05G008350 vs. TrEMBL
Match: P94012_CUCMA (Phloem filament protein OS=Cucurbita maxima GN=PP1 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.1e-26
Identity = 77/196 (39.29%), Postives = 113/196 (57.65%), Query Frame = 1


Query: 55  KWIPVPDISTPCVKDVANYAVTEHNNQTGDNLTFKRVIAGSYLELDDDKIKHRLYIETTN 114
           KWI +PD+S  CV++VA  AV + N Q G +L +  +  G Y EL  + +K+RL+I   +
Sbjct: 16  KWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYDSIHEGWYCELGQNNLKYRLHIRAID 75

Query: 115 SNGDVVINEAVVLVEENDGNRVRTLISF-------DQVFPDEKDPLIFWKEIPDVGKDSV 174
                ++ EA+V  E+    R+R LISF         V P +   +  W +IPD+    V
Sbjct: 76  FLQRSLLYEALVFEEKPKLERIRKLISFLYLLNGGHYVGPVDPPQVEKWIKIPDLRVPFV 135

Query: 175 QELSKFAVQQNNVDTNDNLKYVSTTKGWYYEVNPNTTKYDLRLKAKDCLWRVRDYEARVL 234
           QE+SKFA+ + N    + LKYV    GWY E+  +  K+ L +KAKDCL R+R+YEA VL
Sbjct: 136 QEVSKFAIDEYN-KGGEGLKYVEIYDGWYAEMGQDNIKFRLHVKAKDCLGRLRNYEAIVL 195

Query: 235 EEN--AGEIRTLESFK 242
            +   + +I+ LESFK
Sbjct: 196 VKQFLSKKIKILESFK 210

[Close]

BLAST of Lsi05G008350 vs. TrEMBL
Match: Q7DMD5_CUCMA (Phloem filament protein (Fragment) OS=Cucurbita maxima GN=cPC7 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.8e-22
Identity = 69/186 (37.10%), Postives = 107/186 (57.53%), Query Frame = 1


Query: 48  MSCEPQGK-WIPVPDISTPCVKDVANYAVTEHNNQTGDNLTFKRVIAGSYLELDDDKIKH 107
           +S EPQ K WI +P++  P V+++A +AV EHN + GD L +  V  G +++L  D IK 
Sbjct: 118 VSPEPQEKKWIKIPNVQVPLVQELAKFAVDEHN-KNGDGLKYIEVYEGWFMDLGHDNIKF 177

Query: 108 RLYIETTNSNGDVVINEAVVLVEENDGNRVRTLISFDQVFPDEKDPLIF---WKEIPDVG 167
           RL+++  +  G +   EAVVLVE     R++ L SF         PL+F   W +IP++ 
Sbjct: 178 RLHLKAKDWLGRIRNYEAVVLVEHFWSKRIKILESFKFC-----GPLVFEPKWIQIPNLK 237

Query: 168 KDSVQELSKFAVQQNNVDTNDNLKYVSTTKGWYYEVNPNTTKYDLRLKAKDCLWRVRDYE 227
           +   Q +  F V+Q  +   D LK+ S  +GWY+E+ P + K+ L +KA D L R  +YE
Sbjct: 238 EPGFQVVINFIVEQLKIILGDCLKFHSIYEGWYFELCPISLKFRLHIKAIDFLGRCLNYE 297

Query: 228 ARVLEE 230
             ++EE
Sbjct: 298 IIIIEE 297

[Close]

BLAST of Lsi05G008350 vs. TrEMBL
Match: A0A0A0K7B3_CUCSA (Phloem filament protein OS=Cucumis sativus GN=Csa_7G222870 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.7e-19
Identity = 50/95 (52.63%), Postives = 65/95 (68.42%), Query Frame = 1


Query: 55  KWIPVPDISTPCVKDVANYAVTEHNNQTGDNLTFKRVIAGSYLELDDDKIKHRLYIETTN 114
           KWI +PD  TPCV D+  YAV ++N    DNL FK+VI G YLE+D DK K RL IE  N
Sbjct: 9   KWIQIPDTKTPCVIDLGKYAVDDYNKAHKDNLVFKKVIIGWYLEIDYDKTKLRLIIEVVN 68

Query: 115 SNGDVVINEAVVLVEENDGNRVRTLISFDQVFPDE 150
           S G+V+I E V++V++ DG +V+T ISF   + DE
Sbjct: 69  SKGEVIIYEVVIVVDDKDGKKVKTPISFIPGYIDE 103

[Close]

BLAST of Lsi05G008350 vs. TAIR10
Match: AT4G16500.1 (AT4G16500.1 Cystatin/monellin superfamily protein)

HSP 1 Score: 52.0 bits (123), Expect = 6.1e-07
Identity = 29/85 (34.12%), Postives = 53/85 (62.35%), Query Frame = 1


Query: 157 KEIPDVGKDSVQELSKFAVQQNNVDTNDNLKYVSTTKGWYYEVNPNTTKYDLRLKAKDCL 216
           K I +V    V  ++K+A++++N ++ + L +V   +G    V+   TKYDL++ AKD  
Sbjct: 33  KPIKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVVSG--TKYDLKIAAKDGG 92

Query: 217 WRVRDYEARVLEENAGEIRTLESFK 242
            ++++YEA V+E+     ++LESFK
Sbjct: 93  GKIKNYEAVVVEKLWLHSKSLESFK 115

[Close]

BLAST of Lsi05G008350 vs. NCBI nr
Match: gi|778730266|ref|XP_011659743.1| (PREDICTED: uncharacterized protein LOC101206992 [Cucumis sativus])

HSP 1 Score: 213.8 bits (543), Expect = 3.5e-52
Identity = 114/231 (49.35%), Postives = 153/231 (66.23%), Query Frame = 1


Query: 19  RASKGKKHHQQNLLSLNKLKDISKRRDSKMSCEPQGKWIPVPDISTPCVKDVANYAVTEH 78
           ++  GKKH     ++      ISK+RDSKMSC+ +  WI +PD +TPCV +VA   V +H
Sbjct: 202 KSEGGKKH-----ITTKTFSKISKKRDSKMSCDSKKTWIKIPDCTTPCVNEVAKDGVNQH 261

Query: 79  NNQTGDNLTFKRVIAGSYLELDDDKIKHRLYIETTNSNGDVVINEAVVLVEENDGNRVRT 138
           N  +GD+L +KRVI G + E+DD  IKHRL IE   S G V+I E +++V + DG RVRT
Sbjct: 262 NKASGDSLVYKRVIVGWFWEIDDHAIKHRLIIEVVTSKGVVLIYELIIVVVQKDGKRVRT 321

Query: 139 LISFDQVFPDEKDPLIFWKEIPDVGKDSVQELSKFAVQQNNVDTNDNLKYVSTTKGWYYE 198
           LISF   + DEK+PLIFW +IPDV K  VQ+ +K+AV ++N  T+D L Y ST +GWY+E
Sbjct: 322 LISFLPGYLDEKNPLIFWIKIPDVKKSCVQDCAKWAVTEHNKITHDYLAYDSTVEGWYHE 381

Query: 199 VNPNTTKYDLRLKAKDCLWRVRDYEARVLEEN--AGEIRTLESFKL-NPRK 247
           VNP    + L +KAK+C+ RVRDY A V EE     +I+ LE F L  P+K
Sbjct: 382 VNPFVIIFKLHIKAKECIGRVRDYIAVVKEEKPLTEKIKKLEDFYLIRPKK 427

[Close]

BLAST of Lsi05G008350 vs. NCBI nr
Match: gi|700188975|gb|KGN44208.1| (Phloem filament protein [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 6.8e-48
Identity = 103/202 (50.99%), Postives = 137/202 (67.82%), Query Frame = 1


Query: 48  MSCEPQGKWIPVPDISTPCVKDVANYAVTEHNNQTGDNLTFKRVIAGSYLELDDDKIKHR 107
           MSC+ +  WI +PD +TPCV +VA   V +HN  +GD+L +KRVI G + E+DD  IKHR
Sbjct: 1   MSCDSKKTWIKIPDCTTPCVNEVAKDGVNQHNKASGDSLVYKRVIVGWFWEIDDHAIKHR 60

Query: 108 LYIETTNSNGDVVINEAVVLVEENDGNRVRTLISFDQVFPDEKDPLIFWKEIPDVGKDSV 167
           L IE   S G V+I E +++V + DG RVRTLISF   + DEK+PLIFW +IPDV K  V
Sbjct: 61  LIIEVVTSKGVVLIYELIIVVVQKDGKRVRTLISFLPGYLDEKNPLIFWIKIPDVKKSCV 120

Query: 168 QELSKFAVQQNNVDTNDNLKYVSTTKGWYYEVNPNTTKYDLRLKAKDCLWRVRDYEARVL 227
           Q+ +K+AV ++N  T+D L Y ST +GWY+EVNP    + L +KAK+C+ RVRDY A V 
Sbjct: 121 QDCAKWAVTEHNKITHDYLAYDSTVEGWYHEVNPFVIIFKLHIKAKECIGRVRDYIAVVK 180

Query: 228 EEN--AGEIRTLESFKL-NPRK 247
           EE     +I+ LE F L  P+K
Sbjct: 181 EEKPLTEKIKKLEDFYLIRPKK 202

[Close]

BLAST of Lsi05G008350 vs. NCBI nr
Match: gi|659092737|ref|XP_008447193.1| (PREDICTED: uncharacterized protein LOC103489701 [Cucumis melo])

HSP 1 Score: 177.2 bits (448), Expect = 3.6e-41
Identity = 95/202 (47.03%), Postives = 132/202 (65.35%), Query Frame = 1


Query: 48  MSCEPQGK-WIPVPDISTPCVKDVANYAVTEHNNQTGDNLTFKRVIAGSYLELDDDKIKH 107
           MSCE + + WI + D +TPCV +   +AV +HN + GDNL FK+VI G YLE+D +K K 
Sbjct: 1   MSCETKKEQWIQIHDTTTPCVINFGKHAVDDHNKEKGDNLVFKKVIIGWYLEIDYNKTKL 60

Query: 108 RLYIETTNSNGDVVINEAVVLVEENDGNRVRTLISFDQVFPDEKDPLIFWKEIPDVGKDS 167
           RL IE  NS G+V+  E V++V++ DG  V+T+ISF     DEK+P  FW +I +V +  
Sbjct: 61  RLIIEVVNSKGEVITFEVVIVVDDKDGKTVKTVISFVPGHIDEKNPWTFWIKIHNVTEPH 120

Query: 168 VQELSKFAVQQNNVDTNDNLKYVSTTKGWYY-EVNPNTTKYDLRLKAKDCLWRVRDYEAR 227
           VQE++KFAV+++N  T+DNL Y+   +GWY+    P  T + L LKAKDCL RVR+YEA 
Sbjct: 121 VQEIAKFAVEEHNKITHDNLIYICIIEGWYHVSTIPPVTLWKLHLKAKDCLGRVREYEAL 180

Query: 228 VLEEN--AGEIRTLESFKLNPR 246
           V EE      +  LE F + P+
Sbjct: 181 VKEEKLLPKHVLKLEHFIVIPK 202

[Close]

BLAST of Lsi05G008350 vs. NCBI nr
Match: gi|778664635|ref|XP_011660324.1| (PREDICTED: uncharacterized protein LOC105436367 [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 4.7e-41
Identity = 96/199 (48.24%), Postives = 133/199 (66.83%), Query Frame = 1


Query: 48  MSCEPQGKWIPVPDISTPCVKDVANYAVTEHNNQTGDNLTFKRVIAGSYLELDDDKIKHR 107
           MSC  +G+W  +P  +TPCV D+AN+AVTEHN +TG+ LT K VI G +LEL D K+K R
Sbjct: 1   MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFR 60

Query: 108 LYIETTNSNGDVVINEAVVLVEE-NDGNRVRTLISFDQVFPDEKDPLIFWKEIPDVGKDS 167
           LYI   N  G V+  EAVV V E  D  RV+ L+SF+  + DEKD  +FW  I D     
Sbjct: 61  LYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKD--VFWIVIVDTKASC 120

Query: 168 VQELSKFAVQQNNVDTNDNLKYVSTTKGWYYEVNP-NTTKYDLRLKAKDCLWRVRDYEAR 227
           VQ+++KFAV ++N D +D+L Y+S TKGWY E++P N   +++ L  KDC  RVR+++A 
Sbjct: 121 VQDVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKAL 180

Query: 228 VLEE--NAGEIRTLESFKL 243
           VLE+     +IRTL+ F++
Sbjct: 181 VLEDKPQKEKIRTLKYFEV 197

[Close]

BLAST of Lsi05G008350 vs. NCBI nr
Match: gi|1753099|gb|AAC12676.1| (phloem filament protein [Cucurbita maxima])

HSP 1 Score: 126.3 bits (316), Expect = 7.3e-26
Identity = 77/196 (39.29%), Postives = 113/196 (57.65%), Query Frame = 1


Query: 55  KWIPVPDISTPCVKDVANYAVTEHNNQTGDNLTFKRVIAGSYLELDDDKIKHRLYIETTN 114
           KWI +PD+S  CV++VA  AV + N Q G +L +  +  G Y EL  + +K+RL+I   +
Sbjct: 16  KWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYDSIHEGWYCELGQNNLKYRLHIRAID 75

Query: 115 SNGDVVINEAVVLVEENDGNRVRTLISF-------DQVFPDEKDPLIFWKEIPDVGKDSV 174
                ++ EA+V  E+    R+R LISF         V P +   +  W +IPD+    V
Sbjct: 76  FLQRSLLYEALVFEEKPKLERIRKLISFLYLLNGGHYVGPVDPPQVEKWIKIPDLRVPFV 135

Query: 175 QELSKFAVQQNNVDTNDNLKYVSTTKGWYYEVNPNTTKYDLRLKAKDCLWRVRDYEARVL 234
           QE+SKFA+ + N    + LKYV    GWY E+  +  K+ L +KAKDCL R+R+YEA VL
Sbjct: 136 QEVSKFAIDEYN-KGGEGLKYVEIYDGWYAEMGQDNIKFRLHVKAKDCLGRLRNYEAIVL 195

Query: 235 EEN--AGEIRTLESFK 242
            +   + +I+ LESFK
Sbjct: 196 VKQFLSKKIKILESFK 210

The following BLAST results are available for this feature:

BLAST of Lsi05G008350 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G008350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3W6_CUCSA	4.7e-48	50.99	Phloem filament protein OS=Cucumis sativus GN=Csa_7G222880 PE=4 SV=1	[more]
A0A0A0LYF4_CUCSA	3.3e-41	48.24	Phloem filament protein OS=Cucumis sativus GN=Csa_1G710160 PE=4 SV=1	[more]
P94012_CUCMA	5.1e-26	39.29	Phloem filament protein OS=Cucurbita maxima GN=PP1 PE=4 SV=1	[more]
Q7DMD5_CUCMA	5.8e-22	37.10	Phloem filament protein (Fragment) OS=Cucurbita maxima GN=cPC7 PE=2 SV=1	[more]
A0A0A0K7B3_CUCSA	2.7e-19	52.63	Phloem filament protein OS=Cucumis sativus GN=Csa_7G222870 PE=4 SV=1	[more]

BLAST of Lsi05G008350 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16500.1	6.1e-07	34.12	Cystatin/monellin superfamily protein	[more]

BLAST of Lsi05G008350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778730266\|ref\|XP_011659743.1\|	3.5e-52	49.35	PREDICTED: uncharacterized protein LOC101206992 [Cucumis sativus]	[more]
gi\|700188975\|gb\|KGN44208.1\|	6.8e-48	50.99	Phloem filament protein [Cucumis sativus]	[more]
gi\|659092737\|ref\|XP_008447193.1\|	3.6e-41	47.03	PREDICTED: uncharacterized protein LOC103489701 [Cucumis melo]	[more]
gi\|778664635\|ref\|XP_011660324.1\|	4.7e-41	48.24	PREDICTED: uncharacterized protein LOC105436367 [Cucumis sativus]	[more]
gi\|1753099\|gb\|AAC12676.1\|	7.3e-26	39.29	phloem filament protein [Cucurbita maxima]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR020381	Proteinase inhibitor I25, cystatin, conserved region
IPR009994	PP1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G008350.1	Lsi05G008350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009994	Phloem filament PP1	PFAM	PF07430	PP1	coord: 166..240 score: 2.3
IPR020381	Proteinase inhibitor I25, cystatin, conserved region	PRODOM	PD001231		coord: 167..241 score: 8.
IPR020381	Proteinase inhibitor I25, cystatin, conserved region	PFAM	PF16845	SQAPI	coord: 61..144 score: 8.9
None	No IPR available	GENE3D	G3DSA:3.10.450.10		coord: 54..128 score: 4.4E-6coord: 156..241 score: 6.
None	No IPR available	unknown	SSF54403	Cystatin/monellin	coord: 156..241 score: 1.42E-12coord: 54..145 score: 1.11

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G008350	ClCG09G014700	Watermelon (Charleston Gray)	lsiwcgB314
Lsi05G008350	Cla97C09G176950	Watermelon (97103) v2	lsiwmbB352
Lsi05G008350	Bhi05G000509	Wax gourd	lsiwgoB461

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None