Lsi05G004080 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G004080
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	TPX2 (Targeting protein for Xklp2) family protein
Location	chr05 : 5146120 .. 5148104 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAGTTTCACTATAAATTTCCACTTCCATTACTTCCATTTTAGCTGTAGCACCCTAAATTTGACTCTCTCTTAACCTTCCTCATCATCATCCACTCATGGATAAGTCTCAACCAAAATCTTTCATGACCAAGGTTTCTCAGACTTTTGACCCCTTAATTAGTTCTTCTTGGTTTATCTTCTTTTTTTAACCCTTCTTTTTCTTTTTGTTCTTAGACGAAAGACGGAGTTCGAGACCGAGTTTCGGAGAAAGCGGAGAGAGCTCGAGTAAGTTTTCGGGATCATTCGAAATCAAAGTTCTTTTCACTTGTTTGTGGAATGAGAAGTGTGAGGTTTTGTTTTGGTTTGTTTTCCTTATTTTAGGCTCCTCAAAAAGTTCCTGTGAAAGAAAACACCAAGAAGCCACAAGATTTCAAGTTGCATACACAAGAAAGAGCGGTGAAACGAGCAATGTTTAACTACTCGGTGAGTTTGACGTTGAGTATATATAGTTATTTGTTCGTGAAAGCTTTTAAGTTTAGTGGTAATTTAATATGATATTAAAATACCGGAGAGTTGCATATTTTCAAATTCTTGTAGTATATCGTTTTCTATCTCATTAATAACGATGATTACTTGTTGGGCCTCGTGTTAATTTTTTGGATCGACAATCGAGCAGATAGCGACCAAGTTATATGTGACGGAAGTACAAAAAAGAGTGGAAGAAAAGTTGCACAAGGTTAACAACAACTTACAAACCTTTTTAATAACCACAAAACTTGTTTGCAATAAAATAGTGTTCAGCAAATAATTACTAAAGAACAAATTAATGTGAAGCAGATGATCGAAGAGGAAGAGGTTCGTTTGATGAGAAAGGAGATGATTCCCAGAGCTCAACTCATGCCCTACTTTGATAGACCCTACTTTCCACAAAGGTACAACACAAAAAAAGTAATAATAATAATAATAATAAAATTAAAAAAGTTTTATAAATTATATAATATTATTTAAACAAAAATATTTAGGTGTATCTTCAGTTGCACCATCTTTATGTAGTCCATCAAAGTGCCCAATTACAAGTTGCCACTTTACAAACTTTTTTTTTCAAAAACGATGTTTGTTTATATTTTTTCTCCATCTGTGATTGAAAGGGATGTAGGAGAAATTGGTGCAGTCTAGGCTGCATCTAGATATTACTCATATTTTTTATAAAAAAAATAGTTTTTATAAGAGCGAAGTTCGAATGAGTTTTGGAACGGAGCAATACTAGATTGTACCTATTTTCATACATCTTTTTCAGATACAAAGAAAAAATATATATATATATATCATTTTTTACTTTGAGATGCACCATGTATTTTTCAAATAAAAAAAAAAAAAAAGAAAAAAAAAAGACCTTTAACCGTTTAAAAGCACTTTTGACTATTTCCATGGTGTTTTATTACATAGTTCAAAAGTTGGTTTTAAAAATACTATCACTTTTGAGAGTAGAACTAAATTTTCAATTAAAAGTATCATATTTGAAAGAAAACTCGTTAAATTAGTTTCACACTTAAGAAGTCATTTCAAAGTCTCTATGCTTTCGACGTTAAAAAGAATAATACATTGTGATTATTTGTTATGCAGATCAAACCGACCTTTGACGGTCCCGAGAGAACCGAGTTTCTTGATGAACAAGGAACAATGGAACTGTAACACTGACAGTGAACTTTACAGCTTTCAGAGACAAGCTTTGAAACCAATCAAATGAAAAAAACCAACTCTACATTTGTAGATTTTGTGTTTGAAAAAAAAACATATATAATGTTTTCTGATTCTATTTGATGTAGTCATAGAAAGAGAGAAAAGAGAGAGAAAGAGTGATGTTTTTGAGGTAGAGAGAGAAGCATTCTTGCTTCCTGACTTTGTTCTTTCAAATGGGTCCAAATAAAATCCAATGTTTATTACAAATTTTTCGAGTAAATTACATTTTCTTAGTACAACAACGGTATGAATGGAAGATATCCA

mRNA sequence

CACAGTTTCACTATAAATTTCCACTTCCATTACTTCCATTTTAGCTGTAGCACCCTAAATTTGACTCTCTCTTAACCTTCCTCATCATCATCCACTCATGGATAAGTCTCAACCAAAATCTTTCATGACCAAGACGAAAGACGGAGTTCGAGACCGAGTTTCGGAGAAAGCGGAGAGAGCTCGAGCTCCTCAAAAAGTTCCTGTGAAAGAAAACACCAAGAAGCCACAAGATTTCAAGTTGCATACACAAGAAAGAGCGATGATCGAAGAGGAAGAGGTTCGTTTGATGAGAAAGGAGATGATTCCCAGAGCTCAACTCATGCCCTACTTTGATAGACCCTACTTTCCACAAAGGTACAACACAAAAAAAATCAAACCGACCTTTGACGGTCCCGAGAGAACCGAGTTTCTTGATGAACAAGGAACAATGGAACTGTAACACTGACAGTGAACTTTACAGCTTTCAGAGACAAGCTTTGAAACCAATCAAATGAAAAAAACCAACTCTACATTTGTAGATTTTGTGTTTGAAAAAAAAACATATATAATGTTTTCTGATTCTATTTGATGTAGTCATAGAAAGAGAGAAAAGAGAGAGAAAGAGTGATGTTTTTGAGGTAGAGAGAGAAGCATTCTTGCTTCCTGACTTTGTTCTTTCAAATGGGTCCAAATAAAATCCAATGTTTATTACAAATTTTTCGAGTAAATTACATTTTCTTAGTACAACAACGGTATGAATGGAAGATATCCA

Coding sequence (CDS)

ATGGATAAGTCTCAACCAAAATCTTTCATGACCAAGACGAAAGACGGAGTTCGAGACCGAGTTTCGGAGAAAGCGGAGAGAGCTCGAGCTCCTCAAAAAGTTCCTGTGAAAGAAAACACCAAGAAGCCACAAGATTTCAAGTTGCATACACAAGAAAGAGCGATGATCGAAGAGGAAGAGGTTCGTTTGATGAGAAAGGAGATGATTCCCAGAGCTCAACTCATGCCCTACTTTGATAGACCCTACTTTCCACAAAGGTACAACACAAAAAAAATCAAACCGACCTTTGACGGTCCCGAGAGAACCGAGTTTCTTGATGAACAAGGAACAATGGAACTGTAA

Protein sequence

MDKSQPKSFMTKTKDGVRDRVSEKAERARAPQKVPVKENTKKPQDFKLHTQERAMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRYNTKKIKPTFDGPERTEFLDEQGTMEL

Homology

[Close]

BLAST of Lsi05G004080 vs. TrEMBL
Match: A0A0A0LCD4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G258180 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.5e-30
Identity = 81/117 (69.23%), Postives = 81/117 (69.23%), Query Frame = 1


Query: 1   MDKSQPKSFMTKTKDGVRDRVSEKAERARAPQKVPVKENTKKPQDFKLHTQERA------ 60
           MDKSQPKS MTKTKDGVRDRV EKAERAR PQK  VKENTKK QDFKLHTQERA      
Sbjct: 1   MDKSQPKSLMTKTKDGVRDRVLEKAERARVPQKAHVKENTKKSQDFKLHTQERAVKRAMF 60

Query: 61  -----------------------MIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRYN 89
                                  MIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQR N
Sbjct: 61  NYSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSN 117

[Close]

BLAST of Lsi05G004080 vs. TrEMBL
Match: A0A072UZM8_MEDTR (TPX2 (Targeting protein for Xklp2) family protein OS=Medicago truncatula GN=MTR_3g064800 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.9e-13
Identity = 52/107 (48.60%), Postives = 66/107 (61.68%), Query Frame = 1


Query: 11  TKTKDGVRDRVSEKAERARAPQKVPVKENTKKPQDFKLHTQERA---------------- 70
           ++TKD +++R  +K + +R   K P KENTK PQ+FKLHTQERA                
Sbjct: 12  SQTKDVLKERFYDKNKGSR---KSPTKENTK-PQEFKLHTQERAVKRAMFNYEVTTKLYL 71

Query: 71  -------------MIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRYN 89
                        MIEEEE+RL+RKEM+PRAQLMPYFD+P+FPQR N
Sbjct: 72  MELRKRQEEKLMKMIEEEEIRLLRKEMVPRAQLMPYFDKPFFPQRSN 114

[Close]

BLAST of Lsi05G004080 vs. TrEMBL
Match: G7J8N4_MEDTR (TPX2 (Targeting protein for Xklp2) family protein OS=Medicago truncatula GN=MTR_3g064800 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.8e-13
Identity = 52/105 (49.52%), Postives = 64/105 (60.95%), Query Frame = 1


Query: 13  TKDGVRDRVSEKAERARAPQKVPVKENTKKPQDFKLHTQERA------------------ 72
           TKD +++R  +K + +R   K P KENTK PQ+FKLHTQERA                  
Sbjct: 32  TKDVLKERFYDKNKGSR---KSPTKENTK-PQEFKLHTQERAVKRAMFNYEVTTKLYLME 91

Query: 73  -----------MIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRYN 89
                      MIEEEE+RL+RKEM+PRAQLMPYFD+P+FPQR N
Sbjct: 92  LRKRQEEKLMKMIEEEEIRLLRKEMVPRAQLMPYFDKPFFPQRSN 132

[Close]

BLAST of Lsi05G004080 vs. TrEMBL
Match: I3SDU8_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.8e-13
Identity = 52/105 (49.52%), Postives = 64/105 (60.95%), Query Frame = 1


Query: 13  TKDGVRDRVSEKAERARAPQKVPVKENTKKPQDFKLHTQERA------------------ 72
           TKD +++R  +K + +R   K P KENTK PQ+FKLHTQERA                  
Sbjct: 32  TKDVLKERFYDKNKGSR---KSPTKENTK-PQEFKLHTQERAVKRAMFNYEVITKLYLME 91

Query: 73  -----------MIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRYN 89
                      MIEEEE+RL+RKEM+PRAQLMPYFD+P+FPQR N
Sbjct: 92  LRKRQEEKLMKMIEEEEIRLLRKEMVPRAQLMPYFDKPFFPQRSN 132

[Close]

BLAST of Lsi05G004080 vs. TrEMBL
Match: A0A072UYD1_MEDTR (TPX2 (Targeting protein for Xklp2) family protein OS=Medicago truncatula GN=MTR_3g064800 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.8e-13
Identity = 52/105 (49.52%), Postives = 64/105 (60.95%), Query Frame = 1


Query: 13  TKDGVRDRVSEKAERARAPQKVPVKENTKKPQDFKLHTQERA------------------ 72
           TKD +++R  +K + +R   K P KENTK PQ+FKLHTQERA                  
Sbjct: 2   TKDVLKERFYDKNKGSR---KSPTKENTK-PQEFKLHTQERAVKRAMFNYEVTTKLYLME 61

Query: 73  -----------MIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRYN 89
                      MIEEEE+RL+RKEM+PRAQLMPYFD+P+FPQR N
Sbjct: 62  LRKRQEEKLMKMIEEEEIRLLRKEMVPRAQLMPYFDKPFFPQRSN 102

[Close]

BLAST of Lsi05G004080 vs. TAIR10
Match: AT5G37478.1 (AT5G37478.1 TPX2 (targeting protein for Xklp2) protein family)

HSP 1 Score: 66.2 bits (160), Expect = 1.4e-11
Identity = 49/127 (38.58%), Postives = 67/127 (52.76%), Query Frame = 1


Query: 10  MTKTKDGVRDRVSEKAERARAPQ--KVPVKENTKKPQDFKLHTQERA------------- 69
           MTK +  +++R  +K + A      K P KEN KKP +FKLH+ ERA             
Sbjct: 34  MTKVEP-LKERAHDKTKAATTKNITKAPAKEN-KKPLEFKLHSGERAVKRAMFNYSVATN 93

Query: 70  ----------------MIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRYN---TKKIKPT 103
                           MIEEEE+R++RKEM+P+AQLMP+FDRP+ PQR +   T   +P+
Sbjct: 94  YYIQKLQKKQEERLQKMIEEEEIRMLRKEMVPKAQLMPFFDRPFLPQRSSRPLTMPKEPS 153

[Close]

BLAST of Lsi05G004080 vs. TAIR10
Match: AT3G01015.1 (AT3G01015.1 TPX2 (targeting protein for Xklp2) protein family)

HSP 1 Score: 50.4 bits (119), Expect = 8.2e-07
Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 1


Query: 26  ERARAPQKVPVKENTKKPQDFKLHTQERAMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQ 85
           ERA    +V  K N  +    +   Q++ + EEEE+R +RKE++P+AQ MPYFDRP+ P+
Sbjct: 384 ERAEFDYQVTEKINLVEQYKTERERQQK-LAEEEEIRRLRKELVPKAQPMPYFDRPFIPK 443

Query: 86  RYN---TKKIKPTFDGPE 101
           R N   T    P F+ P+
Sbjct: 444 RSNKHPTVPRDPKFNIPQ 460

[Close]

BLAST of Lsi05G004080 vs. TAIR10
Match: AT5G15510.2 (AT5G15510.2 TPX2 (targeting protein for Xklp2) protein family)

HSP 1 Score: 47.8 bits (112), Expect = 5.3e-06
Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 1


Query: 29  RAPQKVPVKENTKKPQDFKLHTQ-ERAMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQR 87
           RA     V E     + +K+  + ++ + EEEE+R +RKE++P+AQ MPYFDRP+ P+R
Sbjct: 395 RAEFDYQVAEKMSFIEQYKMERERQQKLAEEEEIRRLRKELVPKAQPMPYFDRPFIPRR 453

[Close]

BLAST of Lsi05G004080 vs. NCBI nr
Match: gi|659123247|ref|XP_008461565.1| (PREDICTED: uncharacterized protein LOC103500135 [Cucumis melo])

HSP 1 Score: 142.1 bits (357), Expect = 5.9e-31
Identity = 81/115 (70.43%), Postives = 81/115 (70.43%), Query Frame = 1


Query: 1   MDKSQPKSFMTKTKDGVRDRVSEKAERARAPQKVPVKENTKKPQDFKLHTQERA------ 60
           MDKSQPKS MTKTKDGVRDRV EK ERAR PQK PVKENTKKPQDFKLHTQERA      
Sbjct: 1   MDKSQPKSLMTKTKDGVRDRVLEKVERARVPQKAPVKENTKKPQDFKLHTQERAVKRAMF 60

Query: 61  -----------------------MIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQR 87
                                  MIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQR
Sbjct: 61  NYSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQR 115

[Close]

BLAST of Lsi05G004080 vs. NCBI nr
Match: gi|449455828|ref|XP_004145652.1| (PREDICTED: protein TPX2-like [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 6.5e-30
Identity = 81/117 (69.23%), Postives = 81/117 (69.23%), Query Frame = 1


Query: 1   MDKSQPKSFMTKTKDGVRDRVSEKAERARAPQKVPVKENTKKPQDFKLHTQERA------ 60
           MDKSQPKS MTKTKDGVRDRV EKAERAR PQK  VKENTKK QDFKLHTQERA      
Sbjct: 1   MDKSQPKSLMTKTKDGVRDRVLEKAERARVPQKAHVKENTKKSQDFKLHTQERAVKRAMF 60

Query: 61  -----------------------MIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRYN 89
                                  MIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQR N
Sbjct: 61  NYSIATKLYVTELQKKVEEKLHKMIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRSN 117

[Close]

BLAST of Lsi05G004080 vs. NCBI nr
Match: gi|1012098526|ref|XP_015956713.1| (PREDICTED: protein TPX2 isoform X4 [Arachis duranensis])

HSP 1 Score: 85.1 bits (209), Expect = 8.5e-14
Identity = 56/124 (45.16%), Postives = 72/124 (58.06%), Query Frame = 1


Query: 1   MDKSQPKSFMTKTKDGVRDRVSEKAERARAPQK---VPVKENTKKPQDFKLHTQERA--- 60
           M+K+  KS + K +D V+DR  EK  ++ + Q     P KENTK PQ+FKLHTQERA   
Sbjct: 1   MEKASTKSSL-KARDEVKDRFHEKNNKSSSSQSRKSSPPKENTK-PQEFKLHTQERAVKR 60

Query: 61  --------------------------MIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRYN 93
                                     MIEEEE+R++RKEM+PRAQLMPYFD+P+ PQR N
Sbjct: 61  AMFNYAVTTKFYLMEIQKRQAEKLQKMIEEEEIRMLRKEMVPRAQLMPYFDKPFSPQRSN 120

[Close]

BLAST of Lsi05G004080 vs. NCBI nr
Match: gi|922380669|ref|XP_013460564.1| (TPX2 (targeting protein for Xklp2) family protein [Medicago truncatula])

HSP 1 Score: 82.8 bits (203), Expect = 4.2e-13
Identity = 52/107 (48.60%), Postives = 66/107 (61.68%), Query Frame = 1


Query: 11  TKTKDGVRDRVSEKAERARAPQKVPVKENTKKPQDFKLHTQERA---------------- 70
           ++TKD +++R  +K + +R   K P KENTK PQ+FKLHTQERA                
Sbjct: 12  SQTKDVLKERFYDKNKGSR---KSPTKENTK-PQEFKLHTQERAVKRAMFNYEVTTKLYL 71

Query: 71  -------------MIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRYN 89
                        MIEEEE+RL+RKEM+PRAQLMPYFD+P+FPQR N
Sbjct: 72  MELRKRQEEKLMKMIEEEEIRLLRKEMVPRAQLMPYFDKPFFPQRSN 114

[Close]

BLAST of Lsi05G004080 vs. NCBI nr
Match: gi|922380667|ref|XP_013460563.1| (TPX2 (targeting protein for Xklp2) family protein [Medicago truncatula])

HSP 1 Score: 82.4 bits (202), Expect = 5.5e-13
Identity = 52/105 (49.52%), Postives = 64/105 (60.95%), Query Frame = 1


Query: 13  TKDGVRDRVSEKAERARAPQKVPVKENTKKPQDFKLHTQERA------------------ 72
           TKD +++R  +K + +R   K P KENTK PQ+FKLHTQERA                  
Sbjct: 2   TKDVLKERFYDKNKGSR---KSPTKENTK-PQEFKLHTQERAVKRAMFNYEVTTKLYLME 61

Query: 73  -----------MIEEEEVRLMRKEMIPRAQLMPYFDRPYFPQRYN 89
                      MIEEEE+RL+RKEM+PRAQLMPYFD+P+FPQR N
Sbjct: 62  LRKRQEEKLMKMIEEEEIRLLRKEMVPRAQLMPYFDKPFFPQRSN 102

The following BLAST results are available for this feature:

BLAST of Lsi05G004080 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G004080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCD4_CUCSA	4.5e-30	69.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G258180 PE=4 SV=1	[more]
A0A072UZM8_MEDTR	2.9e-13	48.60	TPX2 (Targeting protein for Xklp2) family protein OS=Medicago truncatula GN=MTR_...	[more]
G7J8N4_MEDTR	3.8e-13	49.52	TPX2 (Targeting protein for Xklp2) family protein OS=Medicago truncatula GN=MTR_...	[more]
I3SDU8_MEDTR	3.8e-13	49.52	Uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]
A0A072UYD1_MEDTR	3.8e-13	49.52	TPX2 (Targeting protein for Xklp2) family protein OS=Medicago truncatula GN=MTR_...	[more]

BLAST of Lsi05G004080 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G37478.1	1.4e-11	38.58	TPX2 (targeting protein for Xklp2) protein family	[more]
AT3G01015.1	8.2e-07	41.03	TPX2 (targeting protein for Xklp2) protein family	[more]
AT5G15510.2	5.3e-06	42.37	TPX2 (targeting protein for Xklp2) protein family	[more]

BLAST of Lsi05G004080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659123247\|ref\|XP_008461565.1\|	5.9e-31	70.43	PREDICTED: uncharacterized protein LOC103500135 [Cucumis melo]	[more]
gi\|449455828\|ref\|XP_004145652.1\|	6.5e-30	69.23	PREDICTED: protein TPX2-like [Cucumis sativus]	[more]
gi\|1012098526\|ref\|XP_015956713.1\|	8.5e-14	45.16	PREDICTED: protein TPX2 isoform X4 [Arachis duranensis]	[more]
gi\|922380669\|ref\|XP_013460564.1\|	4.2e-13	48.60	TPX2 (targeting protein for Xklp2) family protein [Medicago truncatula]	[more]
gi\|922380667\|ref\|XP_013460563.1\|	5.5e-13	49.52	TPX2 (targeting protein for Xklp2) family protein [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0060236	regulation of mitotic spindle organization
GO:0032147	activation of protein kinase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005874	microtubule
GO:0005819	spindle

Vocabulary: **INTERPRO**
Term	Definition
IPR009675	TPX2_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0032147	activation of protein kinase activity
biological_process	GO:0007067	mitotic nuclear division
biological_process	GO:0060236	regulation of mitotic spindle organization
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005874	microtubule
cellular_component	GO:0005819	spindle
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G004080.1	Lsi05G004080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009675	TPX2	PANTHER	PTHR14326	TARGETING PROTEIN FOR XKLP2	coord: 29..86 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G004080	Csa3G258180	Cucumber (Chinese Long) v2	culsiB212
Lsi05G004080	CSPI03G20360	Wild cucumber (PI 183967)	cpilsiB210
Lsi05G004080	Cucsa.031700	Cucumber (Gy14) v1	cgylsiB004
Lsi05G004080	CmaCh01G003980	Cucurbita maxima (Rimu)	cmalsiB440
Lsi05G004080	CmoCh01G004220	Cucurbita moschata (Rifu)	cmolsiB430
Lsi05G004080	MELO3C032079.2	Melon (DHL92) v3.6.1	lsimedB399
Lsi05G004080	Bhi01G001435	Wax gourd	lsiwgoB447
Lsi05G004080	Cp4.1LG02g17130	Cucurbita pepo (Zucchini)	cpelsiB470
Lsi05G004080	CsGy3G020090	Cucumber (Gy14) v2	cgyblsiB199
Lsi05G004080	Carg07491	Silver-seed gourd	carlsiB700
Lsi05G004080	CsaV3_3G020310	Cucumber (Chinese Long) v3	cuclsiB231

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G004080	Cucurbita maxima (Rimu)	cmalsiB249
Lsi05G004080	Cucurbita moschata (Rifu)	cmolsiB237
Lsi05G004080	Cucurbita pepo (Zucchini)	cpelsiB511
Lsi05G004080	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G004080	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G004080	Watermelon (97103) v1	lsiwmB363
Lsi05G004080	Silver-seed gourd	carlsiB435
Lsi05G004080	Watermelon (97103) v2	lsiwmbB329