Lsi05G003960 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAGAAGGAAGAGGAAGGATCGGCGGGTAAGAGAATGAGATGATCATCAACGTTAAAAGTGGAAGAAACGAGTCGTCCTTCGTCTTCTGCTAGCACAGTCATACCAGAGAGAAAAATGGGGGAAATCAGCGAAGAAACTCAGAGGCTTAAGCGAATTGCGGCGGCTGCATACGACTACGACAATGACTCCAGATGGAACGACTACTGGTCCAACATTCTCATTCCTCCTAACTTGGTTTCTCGTTCCGACGTCATCGATCACTTCAAACGCAAATTCTATCAACGTTACATCGTTTGCTCTCTCTCTCTCTCTCTCTCTTTCAATCTAATTGCAACTACTCTTTCTTTTCTGTCTACTTTTTTTGTTGATGTCTTTGAAATGATCGAGTTTATTGATACTTTTCCCCATTTTTTCCTTCTTTGTTGGACGCCCTTTACTGGGTTTTCGAGAATTTTGTGATTTTCATCATGGGTTTTTCTTAATTTTTTGTTTTTTTAATTGGGTTTTTTATTTTGATTTCCGACTTGTCGTTTTGCTTTTGCCATTTTGTTTGATTTTCTGGCTGGCTGCCTCTGTTATTATGATACTAGATTGTGTTGCTTTTCGAGGTCGTTCATTTGTTACTTCTACTGCATTTTCTTCGTTCCTTTCAATTCTGATTGTTAATTAACTTACTCTTTTGAATTACTCTAATGGGGTTTTTTTTTTCTTTCTTTCTCCATTTATGGTGTGATTGTTCTAGGATCTCCCAATCTGCTGTAATTTATGAAACTTGCCTTTTGGTAAATACTTTCATATATCTAGGATTCTTGGTTAGTTGATTGGGTTTGTTTGCTTCATTGAGCGATCGTCTTATGTATGGTGTCATGGTATATCTTCTGCTTTCATCCATCTGTGATTTTACAGTTCTCTTCCAGCTTAAACCTGTTGGTTTATCTGTTTTCTTCGGTGGTTTTTCATTTTCACACCTCAAAAGAATGGTTGCACTCTTGTAGGTTCATCTCAGTGCCTGTAACGTATCATGGTACTGTAATCTAGACCCGAGCTATCAGCCTGGCTCATCTATGTGTACATGTTTTATGTTTTTAGTTGACTTCTATTAGATTTTTGGATTAATCATGTTTTTATGAGTGCTGTGGTGAATGTGTCATTTATACATCAGTTATCATTCCCTTTGTTGGAGACATTGTCTGTGAAAGCTGGTGCCAAATTTTTTATCTGAAATTTCTTATTTTTGTACAAAATTTCCATGTGCATATGATTACATCGTGATAATTTGAATGGCTCAACAATAAGTAGGTTAATGTCTGTGATGGTTTTGCTTTTTTGTTTTCTTCAAGGACATATAATCGGGGAAAAATGAGTTGTAAAAAGGAAAGAGAGGACGAAAGCAATAGAGGAATAAAGAGAGTTTCTTATAGCCTGCTTAGTCTGGTGTAGCCTATATCACAAAGAAGAGAATTCTCTTAGATAACTTTAAGGATTTTATTTTGATTCAAAAGTATGCTAATATTTGATTTTACTCTTTAGGAAAGGGTTTAACAACTAACCAAGTATTTAGAAAACTAAAAGTAAAACAATTAAACTAAACTATTAAAACTAACACACTACATCATAGCCATTGTGATTCAATGTTGTCTTTTCCCTTTGGAGAAGACAGGTTATTTATTCATAGTTCGCTTTTTGAACTTAATTTTACTTGGAGGTCAACAATTTAACTGGTGCTATTCAATTGATATGCAGGATCCTGATCTTGTAGTTGAGACAATGTCTACCAGCGGTTCATTATTTCATCCAGCATCGCAATCAGCACCTTCACCTCCTACAAATGATCAAACTCAGGCACAGAGCTCAGGTATGGGATTTATCTTTCTTCACAGTTTATAAGAGAAATAGTTGCTTTCCAAAGCACACTTGCATTGTAGGCTACCGGGTTTATACATGAATTACTAATTAGGTTACATGTATACTGTCTGACAATAGGGTCAACTACAAGAAATTCAGCAACATCGGCAACTACGGACTCAATTTCAAATTCTTCACGCTGGGATCGACATATGGTTCTTTTTTCACTCAATGCCTGGGTAAAGTGAAATTTATTTTCCCTTACAGTATAGATGCGTGGCTATGGACATGCAGATGCAGTTATAAGTATACATTTGCACCTGTTCTGTATAGATGTACATTATATTAGTATCTTCACGACTTCATATATGTTGGCCTTGGTCAAATATTTTTGGTAATTGTATTTTAATTTATGGAGAATTTAGGTTTACCCCCTCTTAATAAAGATAAATAAACAAACAAACCACATTTGTTGAAATTTTGGTTGATGTTTGTAGATTTAATTAATATAATGAAATGGTATTTTCCATAAAAAGAGTTACACATTTACTTAAATGGCATCGGTATTGTTTATAAAGAAAACCCATACTTTGAAAACAAAGGGGAGGCTGAGAGCTAATCTTTAATTCTTTACCCATTCTATATATATATATATATATATTCAAGTATGCCAAGTAGACCTCTGAAGAGTTAGATTTTATTTGCAGAATCAAGTAAGGTTTATCCAACCTTACCTATTGTCGTTCATTATTTTCTGTAGGTGCTTATTGTGGCATTGTTTGCAATGATACCAATGGTACCCAGAAACCTTTCACATAGGGCTTATCGTCTTTCTATTATGGGCACTGCATGCTCCTCTCTGTTCTCCTTGTTCATCAAATGTGGGGTGAGTTTTTTGGTCAACTAGTTCCTTCTAGGATTCCTTAAAGTTTGTCTGACCTGTTTTATCTTGCAGATGCCCAGGGCATTTGATATGCAGGGTTTGGAAATTTATTTCCAGTCTGTCGTTGCAACAAAAGCTTTTGTCTACTTCATTTACTCTGTTACCTTTGTAGCTTCAAATCTCTGCCTTAAATGTATTGCTGCTTTCCCTTTTACCCTTGCCTTGTATCACAAAGTTTACTTTATGCAATTTGTTTTCTTTTTTAACTTGGTTATGCATTGTATAACGGTTTCTCTTTCATTACAGTTGCTTTAATTCCGATAATATGTGGAGCCATTGAGCAGATTGCCAAGTTCCTTGGGCGTAATTTCCCTCAATCTTTCTTCTACAGGTAAAGTGGCGAGTTTCTCTCAAGTTAACCTGTTTACGTATACAAAATAAAGAGATTGGGGTATTTGATGACAGCACATCTGCACATGGAAGTTTTTGTATAATGTTTTTCTTTCTGGAAACATCTTTTCTTATTTCCTTATTACAGCTAGGAAGGTAGGGAGATTTTGGTGATTGGCTTGGGCCTCTCAAATGCTTAGTAAATCTTTATTTGTTCCTTTTCCAACTATAATAACACATCATCACACAGCAGTAATTTTCTGTTTCAAATTCAGTAGTTTCTAAGAATGACTCTAGTTAGGTGATGGATATAGCTCAGAGGTTGGGTTCAATTGTGAAAAGATGATGAATCGTAGCATTTTAAGGATTTGTTTTTGTTTTTTTTCTTTTTCTAAAAAGCACATTGAACCATCAATATTCTATTTTATTTTACAAAATAATTCTCAATTACACTACATTGAACCAAGAATTTGGTTGGGCTATTTAGATTGTTGGATCATATATATATATTAATATCCTTACAATTAAATGATTCCCAGCTTTGATACTAGACCAGTTGGGTCACCAATTAGAGAGGATGTAGAGAAAATTGTTGGATACTGAAGCTGTACAGTTAAGTTGGTGAAATTTTATTAGCAAGGGAATAAGTTAGGAGGATTAGTTTGTTAGTTATGGGTTGGAGGAAATGGAATAGTAAAGATAGGAAGGTGGAGTTCTGTGTTGAGCTTCTATTCCTCAAATTATGTCGGTATCAGCCTACTTTATTTTCTTTTCCGGATTTCATCTATTTCATGCAATTTCAGCAGGATGCATCAGCAGAATTCTTTGGGCTATATCCTACTAGTATTATTAGCTGTGTTTTTCCCATTTTCAGCTATTTCATACATTTTTGGGTGCATCGTCTGAGTTCTCATTGACCATTTTGCCTTGTGTTTGTTTTTAATAAACCAAAAAGCTCTGGAAAGATGAATGAGGTTATTACAAGGTGGTGAAAGTAGTGTCATATCTCTCCTCCACAACTACGAAAAAGCAATGTGCTCTTCCTATTGAGATTTTTTTGGGACCTTTTGCAGAGAGAGGCAGTAATCTGAGTATCTAAGAAGCACGGGCACTTTAGTTTGGCTAGCATGTCCGTGTTCGATACGTGTCGGATACTTGGACACTCCGACACTTGTTGGACACGTACTGGACACTTGTTAGTGCAACAAATGTGTTAGACATGTATTGAACACTTGTTGAGTAGACTAAGAAAATACATATATGACAGTAATAATAACTTTTGAGTGTGAAATACATCAAGCTAAGTCTTTTAAGCATATAAATGCATCAACCCATTTACTTTGAATTTTATTTTGGTATGAAAGTGATATATATTTTAAAAATGTATATTTTAATAAACGTGTTTTTGCTGTGTCGTGTCCTAGATATTTAAAATATAGCGTGTCGCCGTTCCGTACCGAGTCGTATCCGTATCCGTGCTTCTTAGCTGAGTGTATATATATAACTCTTTTATCTCAGTTTTCTGCATATAACTGAACTGCGTGTGCACTTCCTTCAGTAGATGAAAACCATGTATTTAGATTTTAATTTCAGGTTTTCTCTCTGTGGGGTTTGAGATTCATTGATCTGATGATTGGTTGCTTAGGAAATGGTTGGAGCGGCCTTGTGCTTGGGTGGAATCACATACAACCACTCTTTCTCTTCTGTCTTCAAATGTTGAGATTGCACTGGGTTTCCTTCTGATCATCTCCTTGTTTACGTCGGTTACTTCTCACCTTTTTCCTTTCCATCTCTTAAACATTCATTTTATTCTTTAAATCCATAAACTCACTTTCTCCATGCAGATGGCAGCGAAACTTCGTGCAAACATTCATGTACTGGCAGGTTGGTTTTCTTCTGTTTCTCTCATTTCCTGCACGAAACAGGGGAGTAGCAAACTCGAGTAGGCACGTAATGGACAATCTATGGTATTAATGTCCTTGAAACTGTTTGCTTTGCAGCTACTGAAGCTGATGTATCACTTCCCCATGACTGCTGGGTTTCATCAGAGTGCCTGGGCTAAGGTTGGGAGAAAAGTTAATCCATTTGTCAAGAGGTTTCTCCCATTTCTCAAACCTTTACTTTCTGCAGCTCAAAGTTGGTGGACCAGGTAGAGAAAAACTGAGTAATGAAGTGTTGCTGCTATTAGCTTGCTTGCTTTTAGTCTAATGAATGAATACTCATTTTCTTAGTTTGAAGATAAAAGGCTTCTGTCATATATGGTTGACAAAATCAGCCTCCATTCAAGCAAATGAACCCTGTTAATTGTGGTTTCTGGATGGAGATTTTAAATGGTCATTTCTTATAGGTTAATCTTCTCCTTTTCCTTGCTTTCCAATGACCATATACTGTAAATTTTCTGTTTAGTGAATTGAATTGAACCTTTTCTTTTCTCATTTGCAA ATAGAAGGAAGAGGAAGGATCGGCGGGTAAGAGAATGAGATGATCATCAACGTTAAAAGTGGAAGAAACGAGTCGTCCTTCGTCTTCTGCTAGCACAGTCATACCAGAGAGAAAAATGGGGGAAATCAGCGAAGAAACTCAGAGGCTTAAGCGAATTGCGGCGGCTGCATACGACTACGACAATGACTCCAGATGGAACGACTACTGGTCCAACATTCTCATTCCTCCTAACTTGGTTTCTCGTTCCGACGTCATCGATCACTTCAAACGCAAATTCTATCAACGTTACATCGATCCTGATCTTGTAGTTGAGACAATGTCTACCAGCGGTTCATTATTTCATCCAGCATCGCAATCAGCACCTTCACCTCCTACAAATGATCAAACTCAGGCACAGAGCTCAGGGTCAACTACAAGAAATTCAGCAACATCGGCAACTACGGACTCAATTTCAAATTCTTCACGCTGGGATCGACATATGGTTCTTTTTTCACTCAATGCCTGGGTGCTTATTGTGGCATTGTTTGCAATGATACCAATGGTACCCAGAAACCTTTCACATAGGGCTTATCGTCTTTCTATTATGGGCACTGCATGCTCCTCTCTGTTCTCCTTGTTCATCAAATGTGGGATGCCCAGGGCATTTGATATGCAGGGTTTGGAAATTTATTTCCAGTCTGTCGTTGCAACAAAAGCTTTTGTCTACTTCATTTACTCTGTTACCTTTGTAGCTTCAAATCTCTGCCTTAAATTTGCTTTAATTCCGATAATATGTGGAGCCATTGAGCAGATTGCCAAGTTCCTTGGGCGTAATTTCCCTCAATCTTTCTTCTACAGGAAATGGTTGGAGCGGCCTTGTGCTTGGGTGGAATCACATACAACCACTCTTTCTCTTCTGTCTTCAAATGTTGAGATTGCACTGGGTTTCCTTCTGATCATCTCCTTGTTTACGTCGATGGCAGCGAAACTTCGTGCAAACATTCATGTACTGGCAGCTACTGAAGCTGATGTATCACTTCCCCATGACTGCTGGGTTTCATCAGAGTGCCTGGGCTAAGGTTGGGAGAAAAGTTAATCCATTTGTCAAGAGGTTTCTCCCATTTCTCAAACCTTTACTTTCTGCAGCTCAAAGTTGGTGGACCAGGTAGAGAAAAACTGAGTAATGAAGTGTTGCTGCTATTAGCTTGCTTGCTTTTAGTCTAATGAATGAATACTCATTTTCTTAGTTTGAAGATAAAAGGCTTCTGTCATATATGGTTGACAAAATCAGCCTCCATTCAAGCAAATGAACCCTGTTAATTGTGGTTTCTGGATGGAGATTTTAAATGGTCATTTCTTATAGGTTAATCTTCTCCTTTTCCTTGCTTTCCAATGACCATATACTGTAAATTTTCTGTTTAGTGAATTGAATTGAACCTTTTCTTTTCTCATTTGCAA ATGGGGGAAATCAGCGAAGAAACTCAGAGGCTTAAGCGAATTGCGGCGGCTGCATACGACTACGACAATGACTCCAGATGGAACGACTACTGGTCCAACATTCTCATTCCTCCTAACTTGGTTTCTCGTTCCGACGTCATCGATCACTTCAAACGCAAATTCTATCAACGTTACATCGATCCTGATCTTGTAGTTGAGACAATGTCTACCAGCGGTTCATTATTTCATCCAGCATCGCAATCAGCACCTTCACCTCCTACAAATGATCAAACTCAGGCACAGAGCTCAGGGTCAACTACAAGAAATTCAGCAACATCGGCAACTACGGACTCAATTTCAAATTCTTCACGCTGGGATCGACATATGGTTCTTTTTTCACTCAATGCCTGGGTGCTTATTGTGGCATTGTTTGCAATGATACCAATGGTACCCAGAAACCTTTCACATAGGGCTTATCGTCTTTCTATTATGGGCACTGCATGCTCCTCTCTGTTCTCCTTGTTCATCAAATGTGGGATGCCCAGGGCATTTGATATGCAGGGTTTGGAAATTTATTTCCAGTCTGTCGTTGCAACAAAAGCTTTTGTCTACTTCATTTACTCTGTTACCTTTGTAGCTTCAAATCTCTGCCTTAAATTTGCTTTAATTCCGATAATATGTGGAGCCATTGAGCAGATTGCCAAGTTCCTTGGGCGTAATTTCCCTCAATCTTTCTTCTACAGGAAATGGTTGGAGCGGCCTTGTGCTTGGGTGGAATCACATACAACCACTCTTTCTCTTCTGTCTTCAAATGTTGAGATTGCACTGGGTTTCCTTCTGATCATCTCCTTGTTTACGTCGATGGCAGCGAAACTTCGTGCAAACATTCATGTACTGGCAGCTACTGAAGCTGATGTATCACTTCCCCATGACTGCTGGGTTTCATCAGAGTGCCTGGGCTAA MGEISEETQRLKRIAAAAYDYDNDSRWNDYWSNILIPPNLVSRSDVIDHFKRKFYQRYIDPDLVVETMSTSGSLFHPASQSAPSPPTNDQTQAQSSGSTTRNSATSATTDSISNSSRWDRHMVLFSLNAWVLIVALFAMIPMVPRNLSHRAYRLSIMGTACSSLFSLFIKCGMPRAFDMQGLEIYFQSVVATKAFVYFIYSVTFVASNLCLKFALIPIICGAIEQIAKFLGRNFPQSFFYRKWLERPCAWVESHTTTLSLLSSNVEIALGFLLIISLFTSMAAKLRANIHVLAATEADVSLPHDCWVSSECLG
BLAST of Lsi05G003960 vs. TrEMBL
Match: W9RU36_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009130 PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 1.8e-97 Identity = 182/281 (64.77%), Postives = 224/281 (79.72%), Query Frame = 1
BLAST of Lsi05G003960 vs. TrEMBL
Match: M5WSP7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008247mg PE=4 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 2.6e-96 Identity = 184/279 (65.95%), Postives = 227/279 (81.36%), Query Frame = 1
BLAST of Lsi05G003960 vs. TrEMBL
Match: A0A061EI47_THECC (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase isoform 1 OS=Theobroma cacao GN=TCM_019603 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 5.9e-96 Identity = 183/282 (64.89%), Postives = 225/282 (79.79%), Query Frame = 1
BLAST of Lsi05G003960 vs. TrEMBL
Match: E5GCT3_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 1.7e-95 Identity = 176/282 (62.41%), Postives = 223/282 (79.08%), Query Frame = 1
BLAST of Lsi05G003960 vs. TrEMBL
Match: R0G5P7_9BRAS (Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10014023mg PE=4 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 2.2e-95 Identity = 179/285 (62.81%), Postives = 227/285 (79.65%), Query Frame = 1
BLAST of Lsi05G003960 vs. TAIR10
Match: AT3G02420.1 (AT3G02420.1 unknown protein) HSP 1 Score: 353.6 bits (906), Expect = 1.3e-97 Identity = 177/285 (62.11%), Postives = 226/285 (79.30%), Query Frame = 1
BLAST of Lsi05G003960 vs. NCBI nr
Match: gi|703103801|ref|XP_010097824.1| (hypothetical protein L484_009130 [Morus notabilis]) HSP 1 Score: 364.0 bits (933), Expect = 2.6e-97 Identity = 182/281 (64.77%), Postives = 224/281 (79.72%), Query Frame = 1
BLAST of Lsi05G003960 vs. NCBI nr
Match: gi|645248612|ref|XP_008230374.1| (PREDICTED: uncharacterized protein LOC103329654 [Prunus mume]) HSP 1 Score: 363.6 bits (932), Expect = 3.4e-97 Identity = 186/279 (66.67%), Postives = 228/279 (81.72%), Query Frame = 1
BLAST of Lsi05G003960 vs. NCBI nr
Match: gi|595938221|ref|XP_007215643.1| (hypothetical protein PRUPE_ppa008247mg [Prunus persica]) HSP 1 Score: 360.1 bits (923), Expect = 3.8e-96 Identity = 184/279 (65.95%), Postives = 227/279 (81.36%), Query Frame = 1
BLAST of Lsi05G003960 vs. NCBI nr
Match: gi|590653327|ref|XP_007033392.1| (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase isoform 1 [Theobroma cacao]) HSP 1 Score: 359.0 bits (920), Expect = 8.4e-96 Identity = 183/282 (64.89%), Postives = 225/282 (79.79%), Query Frame = 1
BLAST of Lsi05G003960 vs. NCBI nr
Match: gi|659119008|ref|XP_008459425.1| (PREDICTED: transmembrane protein 33 homolog isoform X2 [Cucumis melo]) HSP 1 Score: 357.5 bits (916), Expect = 2.5e-95 Identity = 176/282 (62.41%), Postives = 223/282 (79.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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