Lsi05G003130 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G003130
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Major latex-like protein
Location	chr05 : 4007530 .. 4009810 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAAAATGATAAAAAGTTAGCCAAATTAAATTATTGAGTGGTAGTTCAAAACATTACTAAAATATTCACCCAAATTCACTATAAAATCCCTCTTTTAGCCTAAAGTTTTTATATCATAAAAAGATCATAAAAATGAGCCAAAGTGATAGCATTTGGGCAAAGGTTCAGCTAAAATCTCCACCTGAGAAGTTCTATGGCTTCTTCAGGAACCATATGGGGGATTTGGTCAATATGTATCCTGAACACTTCCAAAGCTTTCACTTTCTTGAAGGAGAAAGCTTCTCTACTGGCAGTGTTATGCATTGGCAATACCACCTTGGTGAGAGCTAGAGATATTTTATTATTCTTTGCTGTTTTTATCTTTAATTTCTTCTATTTTGTTTTAGGTTTAAATCCCGAGGTTTCGTCTTTGAACTTTCATGTCTATTCTATTTTGATTTCTCGACTTTTGAGAATATTACTAGCTATATGGGGGTTTGATCGAATTTTCACAAAAGTTTATTTAAAAAAAAAATACTTGGGTGAGTCTTTAGCTGCGTCCATCTTTCTGTAGCTCATCCAAATACTTAATCATAAGTTGCCACGTTGCCAGTTACATCTATATTTTTATTTTATTATTTTTAATTTGTGATTGAAGAAGATGCATGGAGATACGTGTTTATTATATATATATTTTTTAATTCAACAATTTGTATGAGATGTGGAGATTCAAACCTTGGAGCTATTGGTTGAGGTTATAATGCCTTAAACCAGTAGATCAATGCTTTAGTTGATATGTTTATTTTTAATCCTAATATCTTTACTATTTTTTAAAAGAATATAACCGTCTTGGTCTTTGCTAGCCACTATTTTACAACCAAATATTTACTCACTCAATATGTTTTTTTTTTTTTTTAAACACATTCAATATGTTCTTGTCTCAGCCAACTTAGGTATGACTTTAATATATATGCCCACACCAACATATTAATAAGTTTATAAAAATAAAAAAAGAATAAGGATCAATAATATAGTTATCACTTTGAAGTTAATAAACAATCTTCTAATAAAAAATAATTTATATATATGAAAATTTTTATCAAACTATTTACAGAAAATAGAAAAAAAAAATAGTGATAGGCATTGGTAGACTTCTATCAACATCTATCAATGATAGACTTATATCAGCATCTATCACAACTGTCTAAAATTTTTTCTATTTTGTGTAAATAGTTTTTCTTATTTTTCTATTTTTAAAATTTTTCATATATATATATATATATATATATATAAAATACTCATGAACACAATCTTTTAGGCCTTGTTTGATAACCATTTGATTTTTGAAAATTAAGCCTATTTTCTCTCAATTTGTCACAATAATTTTCATCTTTCATAGAGAAAAGAGTTGGATTCTTAGCTAAATTGAAAAAAATAAAAACAAATTTTTGTTTATTTTATGATTTTAAAAAATTAGATTGATTTTTAAAAATATTGGTAGGAAATAAATTACAAAGATGTTTTATAGACTTAAAAAAACAAAATTCAATATCAACACATTAGTTATATACAGATGTTCATTGCATAATATTTGATTCGTGCATATGAATTAATAACAAAAAAAGAGAGAGGGTTTTGAATTATGAATATTCAAATAACAGGAAGTCCAGCAGCAGCAAAGATAAAGATGAGACTTGTAGATGATGTGAAGAAGTTCATAGTTTATGAAATTGTTGAAGGAGATGTGCTAAAGTATTACAAAGTTTTCAGAGCAAAACTTGAAGCTGTTAATGGAGGCTTAAACAAAGTGGGAGGAAACTTTGCAAAATGGACTATTGAATTTGAAAAGGCAAATGAAAATGTTCCTTCACCAGAAAGCTACTTGGAATTGGCTGTCAAAGTCTCCAAAGGCCTTGATGCTTATATTTTCAAGAACTAAAACCATACAACAACTAATTAAGTTGATCATGCCCTAAGTAAATGTCGTTGTTTGTACTTGGTTTGTTCTTAAATAAGAAATTTTATGTGTTTATGTTGTATAATTAAGAGTATGTGGGTTTTGGGGAAAATGTGTGTTTATATGTAATTGATAATTTATCTATTGTGTGTGTGTCAAAGCTATCAAATGTGCCATGGATCACCATGTGTAGTACTCAATGTGAAACTTCAATATTTTAAGGGTGTTTGAGATTGCTTCTTGAATGCAAGTGCTTTTAGTCATAGTACTTTTAATTGTAAGCAATTTATTGAAAAGTCATTCAGTAAATTATTTTTGATGTTTGGTTTTTGTACTCTTAAAA

mRNA sequence

TAAAAAAATGATAAAAAGTTAGCCAAATTAAATTATTGAGTGGTAGTTCAAAACATTACTAAAATATTCACCCAAATTCACTATAAAATCCCTCTTTTAGCCTAAAGTTTTTATATCATAAAAAGATCATAAAAATGAGCCAAAGTGATAGCATTTGGGCAAAGGTTCAGCTAAAATCTCCACCTGAGAAGTTCTATGGCTTCTTCAGGAACCATATGGGGGATTTGGTCAATATGTATCCTGAACACTTCCAAAGCTTTCACTTTCTTGAAGGAGAAAGCTTCTCTACTGGCAGTGTTATGCATTGGCAATACCACCTTGGAAGTCCAGCAGCAGCAAAGATAAAGATGAGACTTGTAGATGATGTGAAGAAGTTCATAGTTTATGAAATTGTTGAAGGAGATGTGCTAAAGTATTACAAAGTTTTCAGAGCAAAACTTGAAGCTGTTAATGGAGGCTTAAACAAAGTGGGAGGAAACTTTGCAAAATGGACTATTGAATTTGAAAAGGCAAATGAAAATGTTCCTTCACCAGAAAGCTACTTGGAATTGGCTGTCAAAGTCTCCAAAGGCCTTGATGCTTATATTTTCAAGAACTAAAACCATACAACAACTAATTAAGTTGATCATGCCCTAAGTAAATGTCGTTGTTTGTACTTGGTTTGTTCTTAAATAAGAAATTTTATGTGTTTATGTTGTATAATTAAGAGTATGTGGGTTTTGGGGAAAATGTGTGTTTATATGTAATTGATAATTTATCTATTGTGTGTGTGTCAAAGCTATCAAATGTGCCATGGATCACCATGTGTAGTACTCAATGTGAAACTTCAATATTTTAAGGGTGTTTGAGATTGCTTCTTGAATGCAAGTGCTTTTAGTCATAGTACTTTTAATTGTAAGCAATTTATTGAAAAGTCATTCAGTAAATTATTTTTGATGTTTGGTTTTTGTACTCTTAAAA

Coding sequence (CDS)

ATGAGCCAAAGTGATAGCATTTGGGCAAAGGTTCAGCTAAAATCTCCACCTGAGAAGTTCTATGGCTTCTTCAGGAACCATATGGGGGATTTGGTCAATATGTATCCTGAACACTTCCAAAGCTTTCACTTTCTTGAAGGAGAAAGCTTCTCTACTGGCAGTGTTATGCATTGGCAATACCACCTTGGAAGTCCAGCAGCAGCAAAGATAAAGATGAGACTTGTAGATGATGTGAAGAAGTTCATAGTTTATGAAATTGTTGAAGGAGATGTGCTAAAGTATTACAAAGTTTTCAGAGCAAAACTTGAAGCTGTTAATGGAGGCTTAAACAAAGTGGGAGGAAACTTTGCAAAATGGACTATTGAATTTGAAAAGGCAAATGAAAATGTTCCTTCACCAGAAAGCTACTTGGAATTGGCTGTCAAAGTCTCCAAAGGCCTTGATGCTTATATTTTCAAGAACTAA

Protein sequence

MSQSDSIWAKVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQYHLGSPAAAKIKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAVNGGLNKVGGNFAKWTIEFEKANENVPSPESYLELAVKVSKGLDAYIFKN

Homology

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BLAST of Lsi05G003130 vs. Swiss-Prot
Match: MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.8e-17
Identity = 49/151 (32.45%), Postives = 82/151 (54.30%), Query Frame = 1


Query: 4   SDSIWAKVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY-HL 63
           ++++  +V++K+  EKF+  F      +    P + QS    EG+  + GS++ W Y H 
Sbjct: 166 TETLETEVEIKASAEKFHHMFAGKPHHVSKATPGNIQSCDLHEGDWGTVGSIVFWNYVHD 225

Query: 64  GSPAAAKIKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAV--NGGLNKVGGNFAKWT 123
           G    AK ++  VD  K  I + ++EGD++K YK F   ++    +GG     G+   W 
Sbjct: 226 GEAKVAKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQVTPKHGG----SGSVVHWH 285

Query: 124 IEFEKANENVPSPESYLELAVKVSKGLDAYI 152
            E+EK NE V  PE+ L+ AV+VSK +D ++
Sbjct: 286 FEYEKINEEVAHPETLLQFAVEVSKEIDEHL 312

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BLAST of Lsi05G003130 vs. Swiss-Prot
Match: MLP28_ARATH (MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP28 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.0e-14
Identity = 44/144 (30.56%), Postives = 75/144 (52.08%), Query Frame = 1


Query: 11  VQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY-HLGSPAAAK 70
           V++K+  +KF+  F      +    P + Q     EG+  + GS++ W Y H G    AK
Sbjct: 30  VEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAK 89

Query: 71  IKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAVN--GGLNKVGGNFAKWTIEFEKAN 130
            ++  V+  K  I + ++EGD++K YK F   ++     GG     G+   W +E+EK +
Sbjct: 90  ERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGG----PGSIVHWHLEYEKIS 149

Query: 131 ENVPSPESYLELAVKVSKGLDAYI 152
           E V  PE+ L+  V+VSK +D ++
Sbjct: 150 EEVAHPETLLQFCVEVSKEIDEHL 169

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BLAST of Lsi05G003130 vs. Swiss-Prot
Match: ML423_ARATH (MLP-like protein 423 OS=Arabidopsis thaliana GN=MLP423 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.0e-14
Identity = 50/159 (31.45%), Postives = 82/159 (51.57%), Query Frame = 1


Query: 1   MSQSDSIWAKVQLKSPPEKFYGFFRNHMGDLVNMYPEHF----QSFHFLEGESFSTGSVM 60
           M  S  +  +V++KSP EKF+      +GD +N++P+ F    ++   L G+  + GS+ 
Sbjct: 1   MGLSGVLHVEVEVKSPAEKFWVA----LGDGINLFPKAFPNDYKTIQVLAGDGNAPGSIR 60

Query: 61  HWQYHLGSPAA--AKIKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAVNGGLNKVGG 120
              Y  GSP    +  ++  VD   K + Y I+ G++L+YYK F+  +  +     K GG
Sbjct: 61  LITYGEGSPLVKISAERIEAVDLENKSMSYSIIGGEMLEYYKTFKGTITVI----PKDGG 120

Query: 121 NFAKWTIEFEKANENVPSPESYLELAVKVSKGLDAYIFK 154
           +  KW+ EFEK    +  P    + AVK  K +D Y+ K
Sbjct: 121 SLLKWSGEFEKTAHEIDDPHVIKDFAVKNFKEIDEYLLK 151

[Close]

BLAST of Lsi05G003130 vs. Swiss-Prot
Match: MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 5.2e-14
Identity = 43/144 (29.86%), Postives = 73/144 (50.69%), Query Frame = 1


Query: 11  VQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY-HLGSPAAAK 70
           +++K+   KF+  F      +    P   Q     EG+    GS++ W Y H G    AK
Sbjct: 28  IEIKASAGKFHHMFAGRPHHVSKATPGKIQGCELHEGDWGKVGSIVFWNYVHDGEAKVAK 87

Query: 71  IKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAV--NGGLNKVGGNFAKWTIEFEKAN 130
            ++  V+  K  I + ++EGD+LK YK F   ++     GG     G+   W +E+EK +
Sbjct: 88  ERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGG----PGSVVHWHVEYEKID 147

Query: 131 ENVPSPESYLELAVKVSKGLDAYI 152
           + V  PE++L+  V+VSK +D ++
Sbjct: 148 DKVAHPETFLDFCVEVSKEIDEHL 167

[Close]

BLAST of Lsi05G003130 vs. Swiss-Prot
Match: MLP43_ARATH (MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.2e-14
Identity = 45/156 (28.85%), Postives = 79/156 (50.64%), Query Frame = 1


Query: 1   MSQSDSIWAK----VQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVM 60
           M+++ S+  K    V++K+  +KF+  F      +    P+        EG+    GS++
Sbjct: 1   MAEASSLVGKLETEVEIKASAKKFHHMFTERPHHVSKATPDKIHGCELHEGDWGKVGSIV 60

Query: 61  HWQY-HLGSPAAAKIKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAVNGGLNKVGGN 120
            W+Y H G     K K+  VD  K  I ++++EGD++  YK F   L+          G+
Sbjct: 61  IWKYVHDGKLTVGKNKIEAVDPEKNLITFKVLEGDLMNEYKSFAFTLQVTPK--QGESGS 120

Query: 121 FAKWTIEFEKANENVPSPESYLELAVKVSKGLDAYI 152
            A W +E+EK +E V  PE+ L+  V++SK +D ++
Sbjct: 121 IAHWHLEYEKISEEVAHPETLLQFCVEISKEIDEHL 154

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BLAST of Lsi05G003130 vs. TrEMBL
Match: A0A0A0LA34_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342860 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 6.3e-75
Identity = 135/154 (87.66%), Postives = 150/154 (97.40%), Query Frame = 1


Query: 1   MSQSDSIWAKVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY 60
           MSQ++SIWAKV LKSPPEKFYGFFRNHMGDLV+M+P++FQSF FLEGESF+TGSVMHWQY
Sbjct: 1   MSQTESIWAKVPLKSPPEKFYGFFRNHMGDLVHMFPDNFQSFQFLEGESFTTGSVMHWQY 60

Query: 61  HLGSPAAAKIKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAVNGGLNKVGGNFAKWT 120
           HLGSPAAAKIKMR+VDDVKK IVYE ++GDVLK+YKVFRAKLEAVNGGLNKVGGNFAKWT
Sbjct: 61  HLGSPAAAKIKMRVVDDVKKSIVYEFMDGDVLKHYKVFRAKLEAVNGGLNKVGGNFAKWT 120

Query: 121 IEFEKANENVPSPESYLELAVKVSKGLDAYIFKN 155
           IE++KANENVPSPE+Y+ELAVKVSKGLDAYIFKN
Sbjct: 121 IEYQKANENVPSPETYMELAVKVSKGLDAYIFKN 154

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BLAST of Lsi05G003130 vs. TrEMBL
Match: A0A0A0LCN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G340350 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 7.5e-52
Identity = 104/157 (66.24%), Postives = 127/157 (80.89%), Query Frame = 1


Query: 1   MSQSDSIWAKVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY 60
           MSQSDSIW KV LKS  EKFYGFFRNHM DLVNM+PE F+SF F+EG+S S  +V+  +Y
Sbjct: 1   MSQSDSIWVKVHLKSSIEKFYGFFRNHMEDLVNMFPEQFKSFAFVEGQSLSADTVVQLEY 60

Query: 61  HLGSP--AAAKIKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAVNGGLNKV-GGNFA 120
           +LGS     A IK+++VDD+KK+I+YE VEGDVLK YKVF  +LE VNG L+KV GG+FA
Sbjct: 61  NLGSHQLLTANIKLKVVDDMKKYIIYEAVEGDVLKNYKVFTTRLEVVNGSLSKVGGGSFA 120

Query: 121 KWTIEFEKANENVPSPESYLELAVKVSKGLDAYIFKN 155
           KWTI+F KANENVPSPE+YLE+ + +SKG+DAY  KN
Sbjct: 121 KWTIDFVKANENVPSPENYLEMFINMSKGVDAYFSKN 157

[Close]

BLAST of Lsi05G003130 vs. TrEMBL
Match: N0DKL1_CUCPE (Major latex-like protein OS=Cucurbita pepo subsp. ovifera GN=MLP-PG1 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.5e-49
Identity = 98/156 (62.82%), Postives = 123/156 (78.85%), Query Frame = 1


Query: 1   MSQSDSIWAKVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY 60
           M Q+DSIW KV LKS PEK YGFFRNH+GDLV+++PE +QS   +EG+ FS+GSV+ +++
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPETYQSIQLVEGQHFSSGSVVQFKF 60

Query: 61  HLGSP-AAAKIKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAVNGGLNKV-GGNFAK 120
             G    A K  +R+VDDVKK+I+YE VEGD LK +KV RAK E VNGGL+KV  GNF K
Sbjct: 61  QFGDELRAEKWAIRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVRRGNFTK 120

Query: 121 WTIEFEKANENVPSPESYLELAVKVSKGLDAYIFKN 155
           WT+EFEKAN+NV SP++YLEL VK+SKG+DAY  KN
Sbjct: 121 WTVEFEKANQNVASPQNYLELFVKISKGVDAYFSKN 156

[Close]

BLAST of Lsi05G003130 vs. TrEMBL
Match: N0DK19_CUCPE (Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR1 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.7e-48
Identity = 97/156 (62.18%), Postives = 122/156 (78.21%), Query Frame = 1


Query: 1   MSQSDSIWAKVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY 60
           M Q+DSIW KV LKS PEK YGFFRNH+GDLV+++PE +QS   +EG+ FS+GSV+ +++
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPETYQSIQLVEGQHFSSGSVVQFKF 60

Query: 61  HLGSP-AAAKIKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAVNGGLNKV-GGNFAK 120
             G    A K  +R+VDDVKK+I+YE VEGD LK +KV RAK E VNGGL+KV  GNF K
Sbjct: 61  QFGDELRAEKWAIRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVRRGNFTK 120

Query: 121 WTIEFEKANENVPSPESYLELAVKVSKGLDAYIFKN 155
           WT+EFEKAN+NV SP++YLEL VK+SKG+DAY   N
Sbjct: 121 WTVEFEKANQNVASPQNYLELFVKISKGVDAYFSNN 156

[Close]

BLAST of Lsi05G003130 vs. TrEMBL
Match: N0DK07_CUCPE (Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR3 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 5.2e-45
Identity = 96/156 (61.54%), Postives = 116/156 (74.36%), Query Frame = 1


Query: 1   MSQSDSIWAKVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY 60
           M Q+DSIW KV LKS PEK YGFFRNH+GDLV+++PE+F S   +EG+ F  GS++  +Y
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPENFNSIQLVEGQHFDRGSLVLSKY 60

Query: 61  HLG-SPAAAKIKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAVNGGLNKV-GGNFAK 120
             G      K  +R VDDVKK+IVYE VEG+ LK +KV RAK+EAV+GG  KV GGNF K
Sbjct: 61  EFGHEHRVEKWVIRAVDDVKKYIVYEAVEGEALKQFKVLRAKVEAVHGGSTKVGGGNFTK 120

Query: 121 WTIEFEKANENVPSPESYLELAVKVSKGLDAYIFKN 155
            TIEFEKANENV SPE YLEL VK++KG+DAY   N
Sbjct: 121 LTIEFEKANENVASPEIYLELFVKIAKGVDAYFSNN 156

[Close]

BLAST of Lsi05G003130 vs. TAIR10
Match: AT5G28000.1 (AT5G28000.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 90.9 bits (224), Expect = 7.4e-19
Identity = 51/153 (33.33%), Postives = 83/153 (54.25%), Query Frame = 1


Query: 6   SIWAKVQ----LKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY- 65
           S+W +V+    +KSP EKFY  +      +        Q+   LEGE  +  S+++W Y 
Sbjct: 12  SLWGEVEVEVDIKSPAEKFYQVYVGRPDHVAKATSSKVQACDLLEGEWGTISSIVNWNYV 71

Query: 66  HLGSPAAAKIKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAV--NGGLNKVGGNFAK 125
           + G    AK ++ LV+  KK I + ++EGDVL  YK F   +      GG+    G+ AK
Sbjct: 72  YAGKAKVAKERIELVEPEKKLIKFRVIEGDVLAVYKNFFITISVTPKEGGV----GSVAK 131

Query: 126 WTIEFEKANENVPSPESYLELAVKVSKGLDAYI 152
           W +E+EK + NVP PE++L    +++K +D ++
Sbjct: 132 WHLEYEKNDVNVPDPENFLPFLAEMTKEIDEHL 160

[Close]

BLAST of Lsi05G003130 vs. TAIR10
Match: AT5G28010.1 (AT5G28010.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 48/145 (33.10%), Postives = 79/145 (54.48%), Query Frame = 1


Query: 10  KVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY-HLGSPAAA 69
           +V++K+P   FY  +      +    P + QS    +GE  + GS+++W Y H G    A
Sbjct: 22  EVEIKAPAAIFYHIYAGRPHHVAKATPRNVQSCDLHDGEWGTVGSIVYWNYVHEGQAKVA 81

Query: 70  KIKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAV--NGGLNKVGGNFAKWTIEFEKA 129
           K ++ LV+  KK I + ++EGDV+  YK F   ++     GG     G+  KW IE+EK 
Sbjct: 82  KERIELVEPEKKLIKFRVIEGDVMAEYKSFLITIQVTPKEGGT----GSVVKWHIEYEKI 141

Query: 130 NENVPSPESYLELAVKVSKGLDAYI 152
           +ENVP PE+ L    +++K +D ++
Sbjct: 142 DENVPHPENLLPFFAEMTKEIDEHL 162

[Close]

BLAST of Lsi05G003130 vs. TAIR10
Match: AT1G70850.1 (AT1G70850.1 MLP-like protein 34)

HSP 1 Score: 89.4 bits (220), Expect = 2.2e-18
Identity = 49/151 (32.45%), Postives = 82/151 (54.30%), Query Frame = 1


Query: 4   SDSIWAKVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY-HL 63
           ++++  +V++K+  EKF+  F      +    P + QS    EG+  + GS++ W Y H 
Sbjct: 166 TETLETEVEIKASAEKFHHMFAGKPHHVSKATPGNIQSCDLHEGDWGTVGSIVFWNYVHD 225

Query: 64  GSPAAAKIKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAV--NGGLNKVGGNFAKWT 123
           G    AK ++  VD  K  I + ++EGD++K YK F   ++    +GG     G+   W 
Sbjct: 226 GEAKVAKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQVTPKHGG----SGSVVHWH 285

Query: 124 IEFEKANENVPSPESYLELAVKVSKGLDAYI 152
            E+EK NE V  PE+ L+ AV+VSK +D ++
Sbjct: 286 FEYEKINEEVAHPETLLQFAVEVSKEIDEHL 312

[Close]

BLAST of Lsi05G003130 vs. TAIR10
Match: AT1G70880.1 (AT1G70880.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 88.6 bits (218), Expect = 3.7e-18
Identity = 54/144 (37.50%), Postives = 75/144 (52.08%), Query Frame = 1


Query: 11  VQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY-HLGSPAAAK 70
           V+LKS  EKF+         + N  P + QS    EGE    G+V+ W Y H G   +AK
Sbjct: 16  VELKSSVEKFHDLLVGRPHHMSNATPSNIQSAELQEGEMGQVGAVILWNYVHDGEAKSAK 75

Query: 71  IKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAVNGGLNKVG--GNFAKWTIEFEKAN 130
            ++  +D  K  I Y +VEGD+LK Y  F    +       K G  G+ A W  E+EK N
Sbjct: 76  QRIESLDPEKNRITYRVVEGDLLKEYTSFVTTFQVTP----KEGEPGSVAHWHFEYEKIN 135

Query: 131 ENVPSPESYLELAVKVSKGLDAYI 152
           E V  PE+ L+LA +VSK +D ++
Sbjct: 136 EEVAHPETLLQLATEVSKDMDEHL 155

[Close]

BLAST of Lsi05G003130 vs. TAIR10
Match: AT1G70830.1 (AT1G70830.1 MLP-like protein 28)

HSP 1 Score: 79.3 bits (194), Expect = 2.2e-15
Identity = 44/144 (30.56%), Postives = 75/144 (52.08%), Query Frame = 1


Query: 11  VQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY-HLGSPAAAK 70
           V++K+  +KF+  F      +    P + Q     EG+  + GS++ W Y H G    AK
Sbjct: 30  VEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAK 89

Query: 71  IKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAVN--GGLNKVGGNFAKWTIEFEKAN 130
            ++  V+  K  I + ++EGD++K YK F   ++     GG     G+   W +E+EK +
Sbjct: 90  ERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGG----PGSIVHWHLEYEKIS 149

Query: 131 ENVPSPESYLELAVKVSKGLDAYI 152
           E V  PE+ L+  V+VSK +D ++
Sbjct: 150 EEVAHPETLLQFCVEVSKEIDEHL 169

[Close]

BLAST of Lsi05G003130 vs. NCBI nr
Match: gi|659114461|ref|XP_008457062.1| (PREDICTED: MLP-like protein 423 [Cucumis melo])

HSP 1 Score: 295.0 bits (754), Expect = 7.4e-77
Identity = 139/154 (90.26%), Postives = 152/154 (98.70%), Query Frame = 1


Query: 1   MSQSDSIWAKVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY 60
           MSQ++SIWAKVQLKSPPEKFYGFFRNHMGDLV+M+P++FQSF FLEGESF+TGSVMHWQY
Sbjct: 1   MSQTESIWAKVQLKSPPEKFYGFFRNHMGDLVHMFPDNFQSFQFLEGESFTTGSVMHWQY 60

Query: 61  HLGSPAAAKIKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAVNGGLNKVGGNFAKWT 120
           HLGSPAAAKIKMRLVDDVKK IVYEI++GDVLKYYKVFRAKLEAVNGGLNKVGGNFAKWT
Sbjct: 61  HLGSPAAAKIKMRLVDDVKKSIVYEIMDGDVLKYYKVFRAKLEAVNGGLNKVGGNFAKWT 120

Query: 121 IEFEKANENVPSPESYLELAVKVSKGLDAYIFKN 155
           IE++KANENVPSPE+Y+ELAVKVSKGLDAYIFKN
Sbjct: 121 IEYQKANENVPSPENYMELAVKVSKGLDAYIFKN 154

[Close]

BLAST of Lsi05G003130 vs. NCBI nr
Match: gi|449464144|ref|XP_004149789.1| (PREDICTED: MLP-like protein 34 [Cucumis sativus])

HSP 1 Score: 288.1 bits (736), Expect = 9.0e-75
Identity = 135/154 (87.66%), Postives = 150/154 (97.40%), Query Frame = 1


Query: 1   MSQSDSIWAKVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY 60
           MSQ++SIWAKV LKSPPEKFYGFFRNHMGDLV+M+P++FQSF FLEGESF+TGSVMHWQY
Sbjct: 1   MSQTESIWAKVPLKSPPEKFYGFFRNHMGDLVHMFPDNFQSFQFLEGESFTTGSVMHWQY 60

Query: 61  HLGSPAAAKIKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAVNGGLNKVGGNFAKWT 120
           HLGSPAAAKIKMR+VDDVKK IVYE ++GDVLK+YKVFRAKLEAVNGGLNKVGGNFAKWT
Sbjct: 61  HLGSPAAAKIKMRVVDDVKKSIVYEFMDGDVLKHYKVFRAKLEAVNGGLNKVGGNFAKWT 120

Query: 121 IEFEKANENVPSPESYLELAVKVSKGLDAYIFKN 155
           IE++KANENVPSPE+Y+ELAVKVSKGLDAYIFKN
Sbjct: 121 IEYQKANENVPSPETYMELAVKVSKGLDAYIFKN 154

[Close]

BLAST of Lsi05G003130 vs. NCBI nr
Match: gi|778688602|ref|XP_011652791.1| (PREDICTED: uncharacterized protein LOC105435098 [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-51
Identity = 104/157 (66.24%), Postives = 127/157 (80.89%), Query Frame = 1


Query: 1   MSQSDSIWAKVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY 60
           MSQSDSIW KV LKS  EKFYGFFRNHM DLVNM+PE F+SF F+EG+S S  +V+  +Y
Sbjct: 1   MSQSDSIWVKVHLKSSIEKFYGFFRNHMEDLVNMFPEQFKSFAFVEGQSLSADTVVQLEY 60

Query: 61  HLGSP--AAAKIKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAVNGGLNKV-GGNFA 120
           +LGS     A IK+++VDD+KK+I+YE VEGDVLK YKVF  +LE VNG L+KV GG+FA
Sbjct: 61  NLGSHQLLTANIKLKVVDDMKKYIIYEAVEGDVLKNYKVFTTRLEVVNGSLSKVGGGSFA 120

Query: 121 KWTIEFEKANENVPSPESYLELAVKVSKGLDAYIFKN 155
           KWTI+F KANENVPSPE+YLE+ + +SKG+DAY  KN
Sbjct: 121 KWTIDFVKANENVPSPENYLEMFINMSKGVDAYFSKN 157

[Close]

BLAST of Lsi05G003130 vs. NCBI nr
Match: gi|477504342|dbj|BAN14688.1| (major latex-like protein [Cucurbita pepo subsp. ovifera])

HSP 1 Score: 202.2 bits (513), Expect = 6.5e-49
Identity = 98/156 (62.82%), Postives = 123/156 (78.85%), Query Frame = 1


Query: 1   MSQSDSIWAKVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY 60
           M Q+DSIW KV LKS PEK YGFFRNH+GDLV+++PE +QS   +EG+ FS+GSV+ +++
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPETYQSIQLVEGQHFSSGSVVQFKF 60

Query: 61  HLGSP-AAAKIKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAVNGGLNKV-GGNFAK 120
             G    A K  +R+VDDVKK+I+YE VEGD LK +KV RAK E VNGGL+KV  GNF K
Sbjct: 61  QFGDELRAEKWAIRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVRRGNFTK 120

Query: 121 WTIEFEKANENVPSPESYLELAVKVSKGLDAYIFKN 155
           WT+EFEKAN+NV SP++YLEL VK+SKG+DAY  KN
Sbjct: 121 WTVEFEKANQNVASPQNYLELFVKISKGVDAYFSKN 156

[Close]

BLAST of Lsi05G003130 vs. NCBI nr
Match: gi|477504344|dbj|BAN14689.1| (major latex-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 200.3 bits (508), Expect = 2.5e-48
Identity = 97/156 (62.18%), Postives = 122/156 (78.21%), Query Frame = 1


Query: 1   MSQSDSIWAKVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFHFLEGESFSTGSVMHWQY 60
           M Q+DSIW KV LKS PEK YGFFRNH+GDLV+++PE +QS   +EG+ FS+GSV+ +++
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPETYQSIQLVEGQHFSSGSVVQFKF 60

Query: 61  HLGSP-AAAKIKMRLVDDVKKFIVYEIVEGDVLKYYKVFRAKLEAVNGGLNKV-GGNFAK 120
             G    A K  +R+VDDVKK+I+YE VEGD LK +KV RAK E VNGGL+KV  GNF K
Sbjct: 61  QFGDELRAEKWAIRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVRRGNFTK 120

Query: 121 WTIEFEKANENVPSPESYLELAVKVSKGLDAYIFKN 155
           WT+EFEKAN+NV SP++YLEL VK+SKG+DAY   N
Sbjct: 121 WTVEFEKANQNVASPQNYLELFVKISKGVDAYFSNN 156

The following BLAST results are available for this feature:

BLAST of Lsi05G003130 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MLP34_ARATH	3.8e-17	32.45	MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1	[more]
MLP28_ARATH	4.0e-14	30.56	MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP28 PE=1 SV=1	[more]
ML423_ARATH	4.0e-14	31.45	MLP-like protein 423 OS=Arabidopsis thaliana GN=MLP423 PE=2 SV=1	[more]
MLP31_ARATH	5.2e-14	29.86	MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2	[more]
MLP43_ARATH	5.2e-14	28.85	MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=1 SV=1	[more]

BLAST of Lsi05G003130 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA34_CUCSA	6.3e-75	87.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342860 PE=4 SV=1	[more]
A0A0A0LCN2_CUCSA	7.5e-52	66.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G340350 PE=4 SV=1	[more]
N0DKL1_CUCPE	4.5e-49	62.82	Major latex-like protein OS=Cucurbita pepo subsp. ovifera GN=MLP-PG1 PE=2 SV=1	[more]
N0DK19_CUCPE	1.7e-48	62.18	Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR1 PE=2 SV=1	[more]
N0DK07_CUCPE	5.2e-45	61.54	Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR3 PE=2 SV=1	[more]

BLAST of Lsi05G003130 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G28000.1	7.4e-19	33.33	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT5G28010.1	1.7e-18	33.10	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT1G70850.1	2.2e-18	32.45	MLP-like protein 34	[more]
AT1G70880.1	3.7e-18	37.50	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT1G70830.1	2.2e-15	30.56	MLP-like protein 28	[more]

BLAST of Lsi05G003130 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114461\|ref\|XP_008457062.1\|	7.4e-77	90.26	PREDICTED: MLP-like protein 423 [Cucumis melo]	[more]
gi\|449464144\|ref\|XP_004149789.1\|	9.0e-75	87.66	PREDICTED: MLP-like protein 34 [Cucumis sativus]	[more]
gi\|778688602\|ref\|XP_011652791.1\|	1.1e-51	66.24	PREDICTED: uncharacterized protein LOC105435098 [Cucumis sativus]	[more]
gi\|477504342\|dbj\|BAN14688.1\|	6.5e-49	62.82	major latex-like protein [Cucurbita pepo subsp. ovifera]	[more]
gi\|477504344\|dbj\|BAN14689.1\|	2.5e-48	62.18	major latex-like protein [Cucurbita pepo subsp. pepo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009607	response to biotic stimulus
GO:0006952	defense response

Vocabulary: **INTERPRO**
Term	Definition
IPR023393	START-like_dom_sf
IPR000916	Bet_v_I/MLP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G003130.1	Lsi05G003130.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000916	Bet v I/Major latex protein	PFAM	PF00407	Bet_v_1	coord: 3..153 score: 1.0
IPR000916	Bet v I/Major latex protein	SMART	SM01037	Bet_v_1_2	coord: 2..154 score: 5.7
IPR023393	START-like domain	GENE3D	G3DSA:3.30.530.20		coord: 1..154 score: 1.6
None	No IPR available	PANTHER	PTHR31907	FAMILY NOT NAMED	coord: 2..154 score: 8.9
None	No IPR available	PANTHER	PTHR31907:SF2	SUBFAMILY NOT NAMED	coord: 2..154 score: 8.9
None	No IPR available	unknown	SSF55961	Bet v1-like	coord: 68..153 score: 1.1E-26coord: 1..35 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G003130	Csa3G340350	Cucumber (Chinese Long) v2	culsiB212
Lsi05G003130	CSPI03G21750	Wild cucumber (PI 183967)	cpilsiB210
Lsi05G003130	Cucsa.012550	Cucumber (Gy14) v1	cgylsiB322
Lsi05G003130	Cucsa.375440	Cucumber (Gy14) v1	cgylsiB607
Lsi05G003130	CmaCh14G008450	Cucurbita maxima (Rimu)	cmalsiB249
Lsi05G003130	CmaCh01G003600	Cucurbita maxima (Rimu)	cmalsiB440
Lsi05G003130	CmoCh14G008590	Cucurbita moschata (Rifu)	cmolsiB237
Lsi05G003130	CmoCh01G003760	Cucurbita moschata (Rifu)	cmolsiB430
Lsi05G003130	Cla013180	Watermelon (97103) v1	lsiwmB361
Lsi05G003130	MELO3C020274	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G003130	ClCG05G011040	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G003130	MELO3C020274.2	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G003130	Cla97C05G093300	Watermelon (97103) v2	lsiwmbB329
Lsi05G003130	Bhi01G001355	Wax gourd	lsiwgoB431
Lsi05G003130	Cp4.1LG02g16760	Cucurbita pepo (Zucchini)	cpelsiB470
Lsi05G003130	Cp4.1LG03g05900	Cucurbita pepo (Zucchini)	cpelsiB511
Lsi05G003130	CsGy3G020800	Cucumber (Gy14) v2	cgyblsiB192
Lsi05G003130	CsGy3G020930	Cucumber (Gy14) v2	cgyblsiB199
Lsi05G003130	Carg07448	Silver-seed gourd	carlsiB700
Lsi05G003130	Carg26919	Silver-seed gourd	carlsiB464
Lsi05G003130	CsaV3_3G021380	Cucumber (Chinese Long) v3	cuclsiB231

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None