ClCG05G011040 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCCAAACTGATAGCATTTGGGCAAAGGTTCAGCTAAAATCTCCACCTGAGAAGTTCTATGGCTTCTTCAGGAACCATATGGGAGATTTGGTCAATATGTATCCTGAGCACTTCCAAAGCTTCCAGTTTCTTGAAGGAGAGAGCTTCTCTACTGGCAGTGTTATGCATTGGCAATACCACCTTGGTGAGAGAGACATTATTATTGTTTTCTATTTTTATCTTTTCCTCTATTTTGTTTTAGGGTTTAAATCCCAAGTTTTTGTCTTTAGCTTTCATGTTTATTCTATTTTGATTTCTCAACTTTTGAAATATAACTATATGGGGCTTTGATCGAATTCCTATGTACAAAAGTTTATTTTAGAAAAATAGTTGGGTGCATCTTTGTCTGTATCCATCTTTATGCAACCCACTCGATGCCTAACCATAAGTTGCCACGTGGTTTTTTCTTTTTTAATAAAAAAATATAGGTTAAAATACTATTTTAGTTCTTATATTTTGAAGTTTATTTAATTTTATTACCAGTACTTTTAATTGTCCAATTTTAGTTCTTGTAATTTTAATAAATCTTAAATTTAGGTTCCCATGATGGTTTATGTTGTTTTTTTTAAAAAAGAAAACTTTTTGTTCTCTCTATTAGCATTTTTACTATAAATTTTTTGAAAAAAAAATATTCACATGTTGTATTTACTTGCCTGAAAATTATTACTATTATTTAATCAATTCTGGCAAAAATTAATTTTTAGAGACTAAATTTAGGATTTATTGAAATTATATGGACTAAAGTTGAACAATTGAAAATATAGTGACTAAAAATCGGACAAACTTCAAAATATGATGACCAAAATGATATATATATATTAATCATTTGGTTTTTTAAAATCAAGTCTATTTACTCTCAATTTCTTATAATGATTTTCATCATTCCTAAAGAAAAAGAGTTGGATTCTTAGCTAAATTAAAAAAAAAAAAAATTCAAAAAACTATTTTTAAAGTAGATAATAAAGCAAGAAATTTGGATGGCTTAATTTTCAAAAACTAAAAAAAAGCAAATGATTACCAAACGGGCCTTAATAAAATAATAAAAAACGAAATTTGATATCAAACGACATCGATTTTGGCTCAACATTAGTTATATACACACATGTTCATTGAATATTTGATTCATTGCATGAATAAAATAAAGAGAGGGTTTTGAATTATGAACAAATTAACAGGGAGTCCAGCAGCAGCAAAGATAAAGATGAGACTTGTGGATGATGTGAAGAGGTACATAGTCTATGAAATTGTTGAAGGAGATGCCCTAAAGTATTACAAAGTTTTCAGAGCAAAACTTGAAGCTATTAATGGAGGCTTAAACAAAATGGGAGGAAACTTTGCAAAATGGACCATTGAATTTGAAAAGGCAAATGAAAATGTTCCTTCACCAGAAAGCTACTTGGAATTGGCTGTCAAAGTCTCAAAAGGCCTTGATTCTTATATTTTCAAGAACACCTAA ATGAGCCAAACTGATAGCATTTGGGCAAAGGTTCAGCTAAAATCTCCACCTGAGAAGTTCTATGGCTTCTTCAGGAACCATATGGGAGATTTGGTCAATATGTATCCTGAGCACTTCCAAAGCTTCCAGTTTCTTGAAGGAGAGAGCTTCTCTACTGGCAGTGTTATGCATTGGCAATACCACCTTGGGAGTCCAGCAGCAGCAAAGATAAAGATGAGACTTGTGGATGATGTGAAGAGGTACATAGTCTATGAAATTGTTGAAGGAGATGCCCTAAAGTATTACAAAGTTTTCAGAGCAAAACTTGAAGCTATTAATGGAGGCTTAAACAAAATGGGAGGAAACTTTGCAAAATGGACCATTGAATTTGAAAAGGCAAATGAAAATGTTCCTTCACCAGAAAGCTACTTGGAATTGGCTGTCAAAGTCTCAAAAGGCCTTGATTCTTATATTTTCAAGAACACCTAA ATGAGCCAAACTGATAGCATTTGGGCAAAGGTTCAGCTAAAATCTCCACCTGAGAAGTTCTATGGCTTCTTCAGGAACCATATGGGAGATTTGGTCAATATGTATCCTGAGCACTTCCAAAGCTTCCAGTTTCTTGAAGGAGAGAGCTTCTCTACTGGCAGTGTTATGCATTGGCAATACCACCTTGGGAGTCCAGCAGCAGCAAAGATAAAGATGAGACTTGTGGATGATGTGAAGAGGTACATAGTCTATGAAATTGTTGAAGGAGATGCCCTAAAGTATTACAAAGTTTTCAGAGCAAAACTTGAAGCTATTAATGGAGGCTTAAACAAAATGGGAGGAAACTTTGCAAAATGGACCATTGAATTTGAAAAGGCAAATGAAAATGTTCCTTCACCAGAAAGCTACTTGGAATTGGCTGTCAAAGTCTCAAAAGGCCTTGATTCTTATATTTTCAAGAACACCTAA MSQTDSIWAKVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFQFLEGESFSTGSVMHWQYHLGSPAAAKIKMRLVDDVKRYIVYEIVEGDALKYYKVFRAKLEAINGGLNKMGGNFAKWTIEFEKANENVPSPESYLELAVKVSKGLDSYIFKNT
BLAST of ClCG05G011040 vs. Swiss-Prot
Match: MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 2.3e-17 Identity = 50/151 (33.11%), Postives = 79/151 (52.32%), Query Frame = 1
HSP 2 Score: 76.3 bits (186), Expect = 3.4e-13 Identity = 42/145 (28.97%), Postives = 74/145 (51.03%), Query Frame = 1
BLAST of ClCG05G011040 vs. Swiss-Prot
Match: ML423_ARATH (MLP-like protein 423 OS=Arabidopsis thaliana GN=MLP423 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.8e-14 Identity = 51/161 (31.68%), Postives = 81/161 (50.31%), Query Frame = 1
BLAST of ClCG05G011040 vs. Swiss-Prot
Match: MLP43_ARATH (MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 5.2e-14 Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 1
BLAST of ClCG05G011040 vs. Swiss-Prot
Match: MLP28_ARATH (MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP28 PE=1 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 6.8e-14 Identity = 44/144 (30.56%), Postives = 72/144 (50.00%), Query Frame = 1
HSP 2 Score: 76.3 bits (186), Expect = 3.4e-13 Identity = 43/144 (29.86%), Postives = 71/144 (49.31%), Query Frame = 1
BLAST of ClCG05G011040 vs. Swiss-Prot
Match: MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2) HSP 1 Score: 78.6 bits (192), Expect = 6.8e-14 Identity = 43/144 (29.86%), Postives = 71/144 (49.31%), Query Frame = 1
BLAST of ClCG05G011040 vs. TrEMBL
Match: A0A0A0LA34_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342860 PE=4 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 3.1e-74 Identity = 132/154 (85.71%), Postives = 150/154 (97.40%), Query Frame = 1
BLAST of ClCG05G011040 vs. TrEMBL
Match: A0A0A0LCN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G340350 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 2.4e-50 Identity = 99/157 (63.06%), Postives = 126/157 (80.25%), Query Frame = 1
BLAST of ClCG05G011040 vs. TrEMBL
Match: N0DKL1_CUCPE (Major latex-like protein OS=Cucurbita pepo subsp. ovifera GN=MLP-PG1 PE=2 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 2.0e-49 Identity = 97/156 (62.18%), Postives = 124/156 (79.49%), Query Frame = 1
BLAST of ClCG05G011040 vs. TrEMBL
Match: N0DK19_CUCPE (Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR1 PE=2 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 7.8e-49 Identity = 96/156 (61.54%), Postives = 123/156 (78.85%), Query Frame = 1
BLAST of ClCG05G011040 vs. TrEMBL
Match: N0DK07_CUCPE (Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR3 PE=2 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.1e-45 Identity = 96/156 (61.54%), Postives = 118/156 (75.64%), Query Frame = 1
BLAST of ClCG05G011040 vs. TAIR10
Match: AT1G70850.1 (AT1G70850.1 MLP-like protein 34) HSP 1 Score: 90.1 bits (222), Expect = 1.3e-18 Identity = 50/151 (33.11%), Postives = 79/151 (52.32%), Query Frame = 1
HSP 2 Score: 76.3 bits (186), Expect = 1.9e-14 Identity = 42/145 (28.97%), Postives = 74/145 (51.03%), Query Frame = 1
BLAST of ClCG05G011040 vs. TAIR10
Match: AT1G70880.1 (AT1G70880.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 89.0 bits (219), Expect = 2.8e-18 Identity = 54/144 (37.50%), Postives = 73/144 (50.69%), Query Frame = 1
BLAST of ClCG05G011040 vs. TAIR10
Match: AT5G28000.1 (AT5G28000.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 88.2 bits (217), Expect = 4.9e-18 Identity = 49/153 (32.03%), Postives = 80/153 (52.29%), Query Frame = 1
BLAST of ClCG05G011040 vs. TAIR10
Match: AT5G28010.1 (AT5G28010.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 87.0 bits (214), Expect = 1.1e-17 Identity = 46/145 (31.72%), Postives = 76/145 (52.41%), Query Frame = 1
BLAST of ClCG05G011040 vs. TAIR10
Match: AT1G24020.1 (AT1G24020.1 MLP-like protein 423) HSP 1 Score: 80.5 bits (197), Expect = 1.0e-15 Identity = 51/161 (31.68%), Postives = 81/161 (50.31%), Query Frame = 1
BLAST of ClCG05G011040 vs. NCBI nr
Match: gi|659114461|ref|XP_008457062.1| (PREDICTED: MLP-like protein 423 [Cucumis melo]) HSP 1 Score: 292.7 bits (748), Expect = 3.7e-76 Identity = 136/154 (88.31%), Postives = 152/154 (98.70%), Query Frame = 1
BLAST of ClCG05G011040 vs. NCBI nr
Match: gi|449464144|ref|XP_004149789.1| (PREDICTED: MLP-like protein 34 [Cucumis sativus]) HSP 1 Score: 285.8 bits (730), Expect = 4.5e-74 Identity = 132/154 (85.71%), Postives = 150/154 (97.40%), Query Frame = 1
BLAST of ClCG05G011040 vs. NCBI nr
Match: gi|778688602|ref|XP_011652791.1| (PREDICTED: uncharacterized protein LOC105435098 [Cucumis sativus]) HSP 1 Score: 206.5 bits (524), Expect = 3.5e-50 Identity = 99/157 (63.06%), Postives = 126/157 (80.25%), Query Frame = 1
BLAST of ClCG05G011040 vs. NCBI nr
Match: gi|477504342|dbj|BAN14688.1| (major latex-like protein [Cucurbita pepo subsp. ovifera]) HSP 1 Score: 203.4 bits (516), Expect = 2.9e-49 Identity = 97/156 (62.18%), Postives = 124/156 (79.49%), Query Frame = 1
BLAST of ClCG05G011040 vs. NCBI nr
Match: gi|477504344|dbj|BAN14689.1| (major latex-like protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 201.4 bits (511), Expect = 1.1e-48 Identity = 96/156 (61.54%), Postives = 123/156 (78.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |