Lsi05G002680 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G002680
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Senescence-associated protein, putative
Location	chr05 : 3456436 .. 3458647 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATAGGACAAACTCTTTGGACTTCTCTCTTACCTACATCTCTTCATATATTGAATTAAGGGGAAAATTTAAAGAGAAAGAGGAAGATCAAAAGAGATAATGAAGGGAAGTTTATACAATAATAATAAACATAGAAGAGATGATGATGAGAAGAAGGTGATAAAGAGAGTATTGATTACTATAAATGTTGTGGGAAGTTCAGGTCCATTAAGATTTGTGGTGAATAAAGAAGATTTAGTTTCTCAAGTTATTCATATTGCTCTCAAATCTTATGCTCGTCAAGCTCGTCTTCCTCTTCTTGGCACTAATCCTTCCAACTTTCTTCTCTACTCTTCTAATTTTGACTACTTACGTGCCTGTAATTTTCTCTTACCATATTCTATTTTATTTCTTGTTTTTTTCATATATATATACAAGCATGCTAAGTAACTTAGCTGTTACTTCGAAAAAGTTTGTCACATGACAAATTGTGGTTAGGATGCTAAGAGTGCAAGCTGGACTGAAAAAAAATAGAGTTACCCAGTTAGCAGCCTTTTCTCATCTTTCGGCCACATTGATTTACCCATATTAAGTTTCTTACTTTTACTCTCTTGGATTGATTGGTTATAGCTAATTGATGAGTTTTAAATTTTGGTTAAATTTTGAGACTTGTTTAATTTTAGTTCTGTATTTTTAAATGATTTATATTCCGATTTAGTTCATGTACTATCGAGACTTTTTAGTATAACTTGAAAATAATCTCTATTGTTGTAAGTTTTATTGTGGAAATTTTTTCTAAAAGGAAAAAAATGTCTTTATTAGGTCTTCTCTTTATAAAGTTGGAAATATGTTTACCTATGTTGTTTTTTACCTGAGAATTATTATTATTTAGTTAATCAATTTTGATAAAAAAAAATTCTAGATGACGAATTTTAAGGTTTATTGAAAGAACCACATTAAAATTTTAAAAAAAAATTAGAAGAAAAAATACAAAAAAAAATATTCTTTCAACCTCACATTTTTTGAAGATATTCTTTGATCTGGAAATATGTTTTTTCAGATAGTTTGCTCCCTCTCATTGTTAATGAGACATATTGTAGGGAATAGTCCGTGTTTTGATTTGTATGTTCTTTGTCTCAAAAAAAAAAAAAAAAACTTACATTTTCTATTTTGTTTGTTGGACTTTTAAATTAGCTAGGGTCATCAAACTTTCCAATAGGATAGTATATGTAGACCTAATGTAGAAGTCAACCCTTGATGGGCTGGCCTAGCTGTACTTAACACACTTAATATTCCTTATATTATTGAGGCCAAAAAAAAAAAAAAAAAAAGCTATTCCTTAGATGGGATAAATGTTTTAGCCAAAAAGACTATTTCCTAGTTAGTCCTACATAGGATTCAAAAATAGAAAAAAATATCAAACTATTTATAAATATAGAAAAATTTCACTGTCCAGTCTATCACGATAGACTTCTATCACTTAAAGATAGTTTTCTTTTTAATTAACTTTGCATTCAATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTTTTTTTTTTTTTTTTTTTTTGTTCTCTTTTGTCGAGTTTCTTTGAGTTATTTAACATAAATTTTAAAACCTAACACTTGACCTACTACACATGGCTCTAAATAATTGTCCAATATTACTTATGGGTTTTACTATCTCAAAGCGTACACAACCAATTAATTTGATATATATGTTGCTACAAAGGTGTATATATATGTATATATTACTAAATTATATTATATGGTTTCACTTGTTAATTTATGCAGCTCTTAATCCAAGGGAAACCATAGGATCCAAGCAAGCAAGAAACTTTGTGTTGTGTAAGAAGGCTGCAGGTACACCATCATCCCCATTGCCTGATAAAAAGATGAAAAAGTTTATGACAATAAAGGAAACCCATGGCTGGAAGGCTTGGATTAACAAGTCCTTAAGTTTTAAGATATTATCTCATTAAGATAATCGCGTGCTTGTTTAAGCCCCGTTGATAATCATTTGGATTAGTGAGTGGCTTACTATTGTACTATAGAAAATTAATGTATTTGCGCTCGTTTGATAATCATTTGGATTTTG

mRNA sequence

GAATAGGACAAACTCTTTGGACTTCTCTCTTACCTACATCTCTTCATATATTGAATTAAGGGGAAAATTTAAAGAGAAAGAGGAAGATCAAAAGAGATAATGAAGGGAAGTTTATACAATAATAATAAACATAGAAGAGATGATGATGAGAAGAAGGTGATAAAGAGAGTATTGATTACTATAAATGTTGTGGGAAGTTCAGGTCCATTAAGATTTGTGGTGAATAAAGAAGATTTAGTTTCTCAAGTTATTCATATTGCTCTCAAATCTTATGCTCGTCAAGCTCGTCTTCCTCTTCTTGGCACTAATCCTTCCAACTTTCTTCTCTACTCTTCTAATTTTGACTACTTACGTGCCTCTCTTAATCCAAGGGAAACCATAGGATCCAAGCAAGCAAGAAACTTTGTGTTGTGTAAGAAGGCTGCAGGTACACCATCATCCCCATTGCCTGATAAAAAGATGAAAAAGTTTATGACAATAAAGGAAACCCATGGCTGGAAGGCTTGGATTAACAAGTCCTTAAGTTTTAAGATATTATCTCATTAAGATAATCGCGTGCTTGTTTAAGCCCCGTTGATAATCATTTGGATTAGTGAGTGGCTTACTATTGTACTATAGAAAATTAATGTATTTGCGCTCGTTTGATAATCATTTGGATTTTG

Coding sequence (CDS)

ATGAAGGGAAGTTTATACAATAATAATAAACATAGAAGAGATGATGATGAGAAGAAGGTGATAAAGAGAGTATTGATTACTATAAATGTTGTGGGAAGTTCAGGTCCATTAAGATTTGTGGTGAATAAAGAAGATTTAGTTTCTCAAGTTATTCATATTGCTCTCAAATCTTATGCTCGTCAAGCTCGTCTTCCTCTTCTTGGCACTAATCCTTCCAACTTTCTTCTCTACTCTTCTAATTTTGACTACTTACGTGCCTCTCTTAATCCAAGGGAAACCATAGGATCCAAGCAAGCAAGAAACTTTGTGTTGTGTAAGAAGGCTGCAGGTACACCATCATCCCCATTGCCTGATAAAAAGATGAAAAAGTTTATGACAATAAAGGAAACCCATGGCTGGAAGGCTTGGATTAACAAGTCCTTAAGTTTTAAGATATTATCTCATTAA

Protein sequence

MKGSLYNNNKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLPDKKMKKFMTIKETHGWKAWINKSLSFKILSH

Homology

[Close]

BLAST of Lsi05G002680 vs. TrEMBL
Match: A0A0A0LBQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G190360 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.3e-49
Identity = 110/148 (74.32%), Postives = 118/148 (79.73%), Query Frame = 1


Query: 1   MKGSLYNNNKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYAR 60
           MK SL NNNKHRRDD   K IKRVLITINV+GSSGPLRFVV +EDLV +VIHIALKSYAR
Sbjct: 1   MKRSLSNNNKHRRDD--AKEIKRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYAR 60

Query: 61  QARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLPDKK 120
           QARLPLLGT+P+NFLLYSSN      +LNP E IGSKQARNFVLCKK   TP        
Sbjct: 61  QARLPLLGTDPTNFLLYSSNI-----ALNPNEAIGSKQARNFVLCKKEGTTP-------- 120

Query: 121 MKKFMTIKETHGWKAWINKSLSFKILSH 149
             K MTIKE+HGWKAWINKSL+FKILSH
Sbjct: 121 --KRMTIKESHGWKAWINKSLNFKILSH 131

[Close]

BLAST of Lsi05G002680 vs. TrEMBL
Match: A0A072UZQ4_MEDTR (Senescence-associated protein, putative OS=Medicago truncatula GN=MTR_3g065960 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.7e-30
Identity = 76/148 (51.35%), Postives = 99/148 (66.89%), Query Frame = 1


Query: 1   MKGSLYNNNKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYAR 60
           MK  ++  NK+R D    + I + L+TIN++GSSGP+RFVVN+++LVS VI IALKSYAR
Sbjct: 1   MKKIVFEKNKNRGDQKTSR-INKFLVTINIMGSSGPIRFVVNEKELVSGVIDIALKSYAR 60

Query: 61  QARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLPDKK 120
           Q RLPLLG N ++FLLY  N  +   +LN  E IGS +ARNFVLCKK     +     + 
Sbjct: 61  QGRLPLLGFNAADFLLYYPNAGF--DALNALEPIGSYEARNFVLCKKQVNQSNK----EP 120

Query: 121 MKKFMTIKETHGWKAWINKSLSFKILSH 149
             + ++ K   GWK W+NKS S KILSH
Sbjct: 121 QSELVSPKSKSGWKEWLNKSFSLKILSH 141

[Close]

BLAST of Lsi05G002680 vs. TrEMBL
Match: V7CYY7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G230600g PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.0e-29
Identity = 72/144 (50.00%), Postives = 103/144 (71.53%), Query Frame = 1


Query: 5   LYNNNKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARL 64
           L  N K R +D+++K   R L+TIN++GS+GP+RFVVN++++VS+VI  ALKSYAR+ RL
Sbjct: 10  LQKNKKGRYEDEKRKKSTRFLVTINIMGSAGPIRFVVNEKEVVSEVIETALKSYAREGRL 69

Query: 65  PLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLPDKKMKKF 124
           P+LG + +NF LYS+N  +   +L+P E IGS   RNFVLCKK   + S+  P  ++   
Sbjct: 70  PVLGFDATNFFLYSANAGF--DALSPLEPIGSFGVRNFVLCKKQVYS-SNTAPQSEL--- 129

Query: 125 MTIKETHGWKAWINKSLSFKILSH 149
           ++ K + GWKAW+NKSL  KIL+H
Sbjct: 130 VSQKSSGGWKAWLNKSLGLKILTH 147

[Close]

BLAST of Lsi05G002680 vs. TrEMBL
Match: K7LRH7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G216700 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.2e-29
Identity = 73/145 (50.34%), Postives = 98/145 (67.59%), Query Frame = 1


Query: 5   LYNNNKHRRD-DDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQAR 64
           L  NNK++   DDEK   KR L+ IN++GS+GP+RFVVN+++LVS VI  ALKSY+R+ R
Sbjct: 14  LQKNNKNKGSYDDEKPRSKRFLVNINIMGSAGPIRFVVNEKELVSGVIDTALKSYSREGR 73

Query: 65  LPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLPDKKMKK 124
           LP+LG + +NFLLY +N  +   +L+P E IGS   RNFVLCKK   + S   P  ++  
Sbjct: 74  LPVLGFDATNFLLYCANAGF--DALSPLEPIGSFGVRNFVLCKKQVYSSSKAAPQSELAS 133

Query: 125 FMTIKETHGWKAWINKSLSFKILSH 149
             +    HGWKAW+NKS   KI+SH
Sbjct: 134 HKS-SGGHGWKAWLNKSFGLKIVSH 155

[Close]

BLAST of Lsi05G002680 vs. TrEMBL
Match: A0A0B2QD71_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_017995 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.9e-29
Identity = 73/145 (50.34%), Postives = 98/145 (67.59%), Query Frame = 1


Query: 5   LYNNNKHRRD-DDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQAR 64
           L  NNK++   DDEK   KR L+ IN++GS+GP+RFVVN+++LVS VI  ALKSY+R+ R
Sbjct: 14  LQKNNKNKGSYDDEKPRSKRFLVNINIMGSAGPIRFVVNEKELVSGVIDTALKSYSREGR 73

Query: 65  LPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLPDKKMKK 124
           LP+LG + +NFLLY +N  +   +L+P E IGS   RNFVLCKK   + S   P  ++  
Sbjct: 74  LPVLGFDATNFLLYCANAGF--DALSPLEPIGSFGVRNFVLCKKQVYSSSKVAPQSELAS 133

Query: 125 FMTIKETHGWKAWINKSLSFKILSH 149
             +    HGWKAW+NKS   KI+SH
Sbjct: 134 HKS-SGGHGWKAWLNKSFGLKIVSH 155

[Close]

BLAST of Lsi05G002680 vs. TAIR10
Match: AT1G70780.1 (AT1G70780.1 unknown protein)

HSP 1 Score: 98.2 bits (243), Expect = 4.5e-21
Identity = 56/140 (40.00%), Postives = 84/140 (60.00%), Query Frame = 1


Query: 9   NKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLG 68
           NK +++ + K    R+LI++ V+GS+GP+RFV  ++DLV+ VI  ALK YAR+ RLPLLG
Sbjct: 5   NKQKKNQNAKG--NRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPLLG 64

Query: 69  TNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLPDKKMKKFMTIK 128
           ++ ++FLLY         +L+  + IGS  ARNF+LC+K           +        +
Sbjct: 65  SDFNDFLLYCPMVG--PEALSTWDAIGSLGARNFMLCRKPEEKKVEESNGRSDSTINGAR 124

Query: 129 ETHGWKAWINKSLSFKILSH 149
           +    KAWINKS + K+ SH
Sbjct: 125 KGGSLKAWINKSFNLKVSSH 140

[Close]

BLAST of Lsi05G002680 vs. TAIR10
Match: AT1G23150.1 (AT1G23150.1 unknown protein)

HSP 1 Score: 95.5 bits (236), Expect = 2.9e-20
Identity = 56/130 (43.08%), Postives = 77/130 (59.23%), Query Frame = 1


Query: 23  RVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYSSNFD 82
           R+LI++  +GS+GP+RFV N+ DLV+ VI  ALK YAR+ RLP+LG++ ++F+ Y     
Sbjct: 15  RILISVTFLGSAGPIRFVANEGDLVASVIDTALKCYAREGRLPILGSDFNDFVFYCPMVG 74

Query: 83  YLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLPDKKMKKFMTIKETHG----WKAWIN 142
               +L+P E IGS   RNF+LCKK          DK    F       G    +KAWIN
Sbjct: 75  --PGALSPWEAIGSVGVRNFMLCKKKP-EEKKVEEDKGRSNFPINGARKGAGGSFKAWIN 134

Query: 143 KSLSFKILSH 149
           KSL  K+ +H
Sbjct: 135 KSLRLKVTTH 141

[Close]

BLAST of Lsi05G002680 vs. TAIR10
Match: AT5G37730.1 (AT5G37730.1 unknown protein)

HSP 1 Score: 94.0 bits (232), Expect = 8.4e-20
Identity = 49/119 (41.18%), Postives = 76/119 (63.87%), Query Frame = 1


Query: 18  KKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLY 77
           K+  K++L+++NV+GS GP+RF+ N++D VS  I+  LK+YARQ R+P+LG +  NF+ Y
Sbjct: 12  KRKNKKLLVSVNVLGSVGPIRFLANEDDEVSSAINTTLKAYARQGRIPVLGFDVDNFIFY 71

Query: 78  SSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLPDKKMKKFMTIKET--HGWK 135
           S N  +   +L+P+E IGS    NF++CKK       P P +K++     +    HGWK
Sbjct: 72  SINAGF--NTLHPQEKIGSMDVTNFLMCKK------EPRPLEKVEGIRESRARIGHGWK 122

[Close]

BLAST of Lsi05G002680 vs. TAIR10
Match: AT4G22758.1 (AT4G22758.1 unknown protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06
Identity = 34/96 (35.42%), Postives = 50/96 (52.08%), Query Frame = 1


Query: 19  KVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARLPLLGTNPSNFLLYS 78
           K   +V+I++ V GS GP+R +V     V + I I +  Y ++ R P L  + S F L+ 
Sbjct: 119 KEAPKVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKLDRD-SAFELHQ 178

Query: 79  SNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSS 115
           S+F      L  RE IG   +R+F + KKA  T  S
Sbjct: 179 SHFSI--QCLEKREIIGELGSRSFYMRKKAPETGGS 211

[Close]

BLAST of Lsi05G002680 vs. NCBI nr
Match: gi|700202333|gb|KGN57466.1| (hypothetical protein Csa_3G190360 [Cucumis sativus])

HSP 1 Score: 202.6 bits (514), Expect = 4.8e-49
Identity = 110/148 (74.32%), Postives = 118/148 (79.73%), Query Frame = 1


Query: 1   MKGSLYNNNKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYAR 60
           MK SL NNNKHRRDD   K IKRVLITINV+GSSGPLRFVV +EDLV +VIHIALKSYAR
Sbjct: 1   MKRSLSNNNKHRRDD--AKEIKRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYAR 60

Query: 61  QARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLPDKK 120
           QARLPLLGT+P+NFLLYSSN      +LNP E IGSKQARNFVLCKK   TP        
Sbjct: 61  QARLPLLGTDPTNFLLYSSNI-----ALNPNEAIGSKQARNFVLCKKEGTTP-------- 120

Query: 121 MKKFMTIKETHGWKAWINKSLSFKILSH 149
             K MTIKE+HGWKAWINKSL+FKILSH
Sbjct: 121 --KRMTIKESHGWKAWINKSLNFKILSH 131

[Close]

BLAST of Lsi05G002680 vs. NCBI nr
Match: gi|922380719|ref|XP_013460589.1| (senescence-associated protein, putative [Medicago truncatula])

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29
Identity = 76/148 (51.35%), Postives = 99/148 (66.89%), Query Frame = 1


Query: 1   MKGSLYNNNKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYAR 60
           MK  ++  NK+R D    + I + L+TIN++GSSGP+RFVVN+++LVS VI IALKSYAR
Sbjct: 1   MKKIVFEKNKNRGDQKTSR-INKFLVTINIMGSSGPIRFVVNEKELVSGVIDIALKSYAR 60

Query: 61  QARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLPDKK 120
           Q RLPLLG N ++FLLY  N  +   +LN  E IGS +ARNFVLCKK     +     + 
Sbjct: 61  QGRLPLLGFNAADFLLYYPNAGF--DALNALEPIGSYEARNFVLCKKQVNQSNK----EP 120

Query: 121 MKKFMTIKETHGWKAWINKSLSFKILSH 149
             + ++ K   GWK W+NKS S KILSH
Sbjct: 121 QSELVSPKSKSGWKEWLNKSFSLKILSH 141

[Close]

BLAST of Lsi05G002680 vs. NCBI nr
Match: gi|502137596|ref|XP_004503136.1| (PREDICTED: uncharacterized protein LOC101504281 [Cicer arietinum])

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29
Identity = 78/148 (52.70%), Postives = 101/148 (68.24%), Query Frame = 1


Query: 1   MKGSLYNNNKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYAR 60
           MK S++  N++R D       KR L+TIN++GSSGP+RFVVN+++LVS VI  ALKSYAR
Sbjct: 2   MKKSVFEKNRNRGDQKAGNN-KRFLVTINIMGSSGPIRFVVNEKELVSGVIDTALKSYAR 61

Query: 61  QARLPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLPDKK 120
           + RLP+LG N SNFLLY  N ++   +LNP E IGS + RNFVLCKK    PS   P  +
Sbjct: 62  EGRLPVLGFNASNFLLYHPNAEFY--ALNPLEPIGSYEGRNFVLCKKQV-HPSMKEPQSE 121

Query: 121 MKKFMTIKETHGWKAWINKSLSFKILSH 149
           ++   + K   GWKAW+NKS   KILS+
Sbjct: 122 LR---SQKSNGGWKAWLNKSFVSKILSN 142

[Close]

BLAST of Lsi05G002680 vs. NCBI nr
Match: gi|593800702|ref|XP_007163388.1| (hypothetical protein PHAVU_001G230600g [Phaseolus vulgaris])

HSP 1 Score: 137.9 bits (346), Expect = 1.4e-29
Identity = 72/144 (50.00%), Postives = 103/144 (71.53%), Query Frame = 1


Query: 5   LYNNNKHRRDDDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQARL 64
           L  N K R +D+++K   R L+TIN++GS+GP+RFVVN++++VS+VI  ALKSYAR+ RL
Sbjct: 10  LQKNKKGRYEDEKRKKSTRFLVTINIMGSAGPIRFVVNEKEVVSEVIETALKSYAREGRL 69

Query: 65  PLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLPDKKMKKF 124
           P+LG + +NF LYS+N  +   +L+P E IGS   RNFVLCKK   + S+  P  ++   
Sbjct: 70  PVLGFDATNFFLYSANAGF--DALSPLEPIGSFGVRNFVLCKKQVYS-SNTAPQSEL--- 129

Query: 125 MTIKETHGWKAWINKSLSFKILSH 149
           ++ K + GWKAW+NKSL  KIL+H
Sbjct: 130 VSQKSSGGWKAWLNKSLGLKILTH 147

[Close]

BLAST of Lsi05G002680 vs. NCBI nr
Match: gi|571489883|ref|XP_003537448.2| (PREDICTED: uncharacterized protein LOC100775979 [Glycine max])

HSP 1 Score: 136.7 bits (343), Expect = 3.2e-29
Identity = 73/145 (50.34%), Postives = 98/145 (67.59%), Query Frame = 1


Query: 5   LYNNNKHRRD-DDEKKVIKRVLITINVVGSSGPLRFVVNKEDLVSQVIHIALKSYARQAR 64
           L  NNK++   DDEK   KR L+ IN++GS+GP+RFVVN+++LVS VI  ALKSY+R+ R
Sbjct: 14  LQKNNKNKGSYDDEKPRSKRFLVNINIMGSAGPIRFVVNEKELVSGVIDTALKSYSREGR 73

Query: 65  LPLLGTNPSNFLLYSSNFDYLRASLNPRETIGSKQARNFVLCKKAAGTPSSPLPDKKMKK 124
           LP+LG + +NFLLY +N  +   +L+P E IGS   RNFVLCKK   + S   P  ++  
Sbjct: 74  LPVLGFDATNFLLYCANAGF--DALSPLEPIGSFGVRNFVLCKKQVYSSSKAAPQSELAS 133

Query: 125 FMTIKETHGWKAWINKSLSFKILSH 149
             +    HGWKAW+NKS   KI+SH
Sbjct: 134 HKS-SGGHGWKAWLNKSFGLKIVSH 155

The following BLAST results are available for this feature:

BLAST of Lsi05G002680 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G002680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBQ6_CUCSA	3.3e-49	74.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G190360 PE=4 SV=1	[more]
A0A072UZQ4_MEDTR	7.7e-30	51.35	Senescence-associated protein, putative OS=Medicago truncatula GN=MTR_3g065960 P...	[more]
V7CYY7_PHAVU	1.0e-29	50.00	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G230600g PE=4 SV=1	[more]
K7LRH7_SOYBN	2.2e-29	50.34	Uncharacterized protein OS=Glycine max GN=GLYMA_11G216700 PE=4 SV=1	[more]
A0A0B2QD71_GLYSO	2.9e-29	50.34	Uncharacterized protein OS=Glycine soja GN=glysoja_017995 PE=4 SV=1	[more]

BLAST of Lsi05G002680 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70780.1	4.5e-21	40.00	unknown protein	[more]
AT1G23150.1	2.9e-20	43.08	unknown protein	[more]
AT5G37730.1	8.4e-20	41.18	unknown protein	[more]
AT4G22758.1	1.1e-06	35.42	unknown protein	[more]

BLAST of Lsi05G002680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202333\|gb\|KGN57466.1\|	4.8e-49	74.32	hypothetical protein Csa_3G190360 [Cucumis sativus]	[more]
gi\|922380719\|ref\|XP_013460589.1\|	1.1e-29	51.35	senescence-associated protein, putative [Medicago truncatula]	[more]
gi\|502137596\|ref\|XP_004503136.1\|	1.1e-29	52.70	PREDICTED: uncharacterized protein LOC101504281 [Cicer arietinum]	[more]
gi\|593800702\|ref\|XP_007163388.1\|	1.4e-29	50.00	hypothetical protein PHAVU_001G230600g [Phaseolus vulgaris]	[more]
gi\|571489883\|ref\|XP_003537448.2\|	3.2e-29	50.34	PREDICTED: uncharacterized protein LOC100775979 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G002680.1	Lsi05G002680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33270	FAMILY NOT NAMED	coord: 22..148 score: 9.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G002680	Csa3G190360	Cucumber (Chinese Long) v2	culsiB211
Lsi05G002680	CSPI03G17830	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G002680	Cucsa.108630	Cucumber (Gy14) v1	cgylsiB144
Lsi05G002680	CmaCh14G008730	Cucurbita maxima (Rimu)	cmalsiB249
Lsi05G002680	CmoCh14G008900	Cucurbita moschata (Rifu)	cmolsiB237
Lsi05G002680	ClCG05G010590	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G002680	Cla97C05G092940	Watermelon (97103) v2	lsiwmbB329
Lsi05G002680	Bhi01G001311	Wax gourd	lsiwgoB431
Lsi05G002680	Cp4.1LG03g05660	Cucurbita pepo (Zucchini)	cpelsiB511
Lsi05G002680	CsaV3_3G017900	Cucumber (Chinese Long) v3	cuclsiB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G002680	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G002680	Watermelon (97103) v1	lsiwmB361
Lsi05G002680	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G002680	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G002680	Silver-seed gourd	carlsiB158
Lsi05G002680	Silver-seed gourd	carlsiB700
Lsi05G002680	Cucurbita maxima (Rimu)	cmalsiB440
Lsi05G002680	Cucurbita moschata (Rifu)	cmolsiB430
Lsi05G002680	Cucurbita pepo (Zucchini)	cpelsiB470