CsaV3_3G017900 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G017900
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionSenescence-associated protein, putative
Locationchr3 : 13563317 .. 13564605 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCTCTTTTGATCATTTTGTCTCTTTTCACATCTCTTCATTGGGTTTTTGAAGGGGAAGAAACAAAAGAGGAATATTTGAAGATCAAAAGGGATAATGAAGAGAAGTTTATCCAATAATAATAAACATAGAAGAGATGATGCGAAGGAAATAAAGAGAGTGTTGATCACTATAAATGTTATGGGAAGTTCAGGTCCATTAAGATTTGTGGTAAAGGAAGAAGATTTAGTTTGTGAAGTTATTCATATTGCTCTCAAATCATATGCTCGTCAAGCTCGTCTTCCTCTTCTTGGCACCGATCCTACCAACTTTCTTCTCTACTCTTCTAACATAGGTACACACTAGCGATATTATTTTAGCTGTGTTAGTTCGAAAAAGTTTGTTACAAGATAAATTATAGTTAAGACACCTTTCTAAAGATAAACAAAAGAGAGTTATCAAACTAATAACTTTCTTTCTCATCTTTCCATGATTTTCCTTTGTTAGCTTCTTACATTTTACTCTTTTGGATTGATTTTTAGGATTAATTGATGAGTTTTGATGCATGAAATTGTAAAGCTTGTTTGATAATTATTTGGTTCTCAAAAAACTTTGTCTATTTTCTATGGTTTTGCTATCATGATTTACATTTATTTTATTAAGTATCAGACTTAAGTTCTTGCATAAATTTCAAAAACAAAAAGAAAGAAAAGTTTCTTGAGTTAATGAAATATAATGATTATGAATTTGATATAAAAGCACAAACAAACAGACGCTTCAATTCAAATAAATTAAACTGAAGTGTGTTTATATTGAGCTTAGCTTTTGCAAGTGGGACTTAATCAATCATATATATATATATATATTCAAAATTTCTTTTGCAAGTTGGACTTAATCAATCATATATATATATATATATTCAAAATTTAAATGTGTAGCTACGGAAAGAAATAATAAAACTTATATATTAGTACATGATATATGGTTTCACTTGTTAATTTGTGCAGCTCTTAATCCAAATGAAGCCATAGGATCAAAGCAAGCAAGAAACTTTGTGTTGTGTAAGAAGGAAGGCACAACCCCAAAGCGGATGACGATAAAGGAAAGTCATGGTTGGAAAGCTTGGATTAACAAGTCCTTGAATTTCAAGATACTATCTCATTAAAATAAACTGTCGTATTTATTTAAGTCTTAGTTGATAACCATTTGATTCAGCGAGTGACTTATTAATGTACTATAAAAAATTAATTTAGTGAATAGCTTTGGTACGATTATGTATTTAGATTTTTGGATAATCATTTAGATGTTAG

mRNA sequence

ATGAAGAGAAGTTTATCCAATAATAATAAACATAGAAGAGATGATGCGAAGGAAATAAAGAGAGTGTTGATCACTATAAATGTTATGGGAAGTTCAGGTCCATTAAGATTTGTGGTAAAGGAAGAAGATTTAGTTTGTGAAGTTATTCATATTGCTCTCAAATCATATGCTCGTCAAGCTCGTCTTCCTCTTCTTGGCACCGATCCTACCAACTTTCTTCTCTACTCTTCTAACATAGCTCTTAATCCAAATGAAGCCATAGGATCAAAGCAAGCAAGAAACTTTGTGTTGTGTAAGAAGGAAGGCACAACCCCAAAGCGGATGACGATAAAGGAAAGTCATGGTTGGAAAGCTTGGATTAACAAGTCCTTGAATTTCAAGATACTATCTCATTAA

Coding sequence (CDS)

ATGAAGAGAAGTTTATCCAATAATAATAAACATAGAAGAGATGATGCGAAGGAAATAAAGAGAGTGTTGATCACTATAAATGTTATGGGAAGTTCAGGTCCATTAAGATTTGTGGTAAAGGAAGAAGATTTAGTTTGTGAAGTTATTCATATTGCTCTCAAATCATATGCTCGTCAAGCTCGTCTTCCTCTTCTTGGCACCGATCCTACCAACTTTCTTCTCTACTCTTCTAACATAGCTCTTAATCCAAATGAAGCCATAGGATCAAAGCAAGCAAGAAACTTTGTGTTGTGTAAGAAGGAAGGCACAACCCCAAAGCGGATGACGATAAAGGAAAGTCATGGTTGGAAAGCTTGGATTAACAAGTCCTTGAATTTCAAGATACTATCTCATTAA

Protein sequence

MKRSLSNNNKHRRDDAKEIKRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQARLPLLGTDPTNFLLYSSNIALNPNEAIGSKQARNFVLCKKEGTTPKRMTIKESHGWKAWINKSLNFKILSH
Homology
[Close]
BLAST of CsaV3_3G017900 vs. NCBI nr
Match: KGN57466.1 (hypothetical protein Csa_3G190360 [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 8.0e-68
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MKRSLSNNNKHRRDDAKEIKRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQA 60
           MKRSLSNNNKHRRDDAKEIKRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQA
Sbjct: 1   MKRSLSNNNKHRRDDAKEIKRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQA 60

Query: 61  RLPLLGTDPTNFLLYSSNIALNPNEAIGSKQARNFVLCKKEGTTPKRMTIKESHGWKAWI 120
           RLPLLGTDPTNFLLYSSNIALNPNEAIGSKQARNFVLCKKEGTTPKRMTIKESHGWKAWI
Sbjct: 61  RLPLLGTDPTNFLLYSSNIALNPNEAIGSKQARNFVLCKKEGTTPKRMTIKESHGWKAWI 120

Query: 121 NKSLNFKILSH 132
           NKSLNFKILSH
Sbjct: 121 NKSLNFKILSH 131

[Close]
BLAST of CsaV3_3G017900 vs. NCBI nr
Match: XP_022143447.1 (uncharacterized protein LOC111013321 [Momordica charantia])

HSP 1 Score: 172.6 bits (436), Expect = 9.2e-40
Identity = 96/151 (63.58%), Postives = 109/151 (72.19%), Query Frame = 0 

Query: 1   MKRSLSNNNK-HRRDDAKEI------KRVLITINVMGSSGPLRFVVKEEDLVCEVIHIAL 60
           MK SL N  K + R+D  +I      KR+LITI+V+GS+GPLRF+  E+DLVCEVIH AL
Sbjct: 1   MKGSLYNRLKNNNREDGLQISRNEKAKRLLITISVVGSTGPLRFIANEDDLVCEVIHAAL 60

Query: 61  KSYARQARLPLLGTDPTNFLLYSSNI-----ALNPNEAIGSKQARNFVLCKKEGT----- 120
           KSYARQARLPLLG D TNFLLY +N+      LNP E IG KQARNFVLCKK+GT     
Sbjct: 61  KSYARQARLPLLGFDATNFLLYCNNVEKADGCLNPMEQIGPKQARNFVLCKKQGTPLPLH 120

Query: 121 ---TPKRMTIKESHGWKAWINKSLNFKILSH 132
                K M IKESHGWKAWINKSL+FKI SH
Sbjct: 121 DQKMKKLMAIKESHGWKAWINKSLSFKIPSH 151

[Close]
BLAST of CsaV3_3G017900 vs. NCBI nr
Match: XP_022983917.1 (uncharacterized protein LOC111482395 [Cucurbita maxima])

HSP 1 Score: 171.4 bits (433), Expect = 2.0e-39
Identity = 93/143 (65.03%), Postives = 104/143 (72.73%), Query Frame = 0 

Query: 3   RSLSNNNKHRRDDAKEIKRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQARL 62
           + L   NK R +     KR+LI++NV+GSSGPLRFV KEEDLVCEVIH ALKSYARQARL
Sbjct: 2   KGLGLKNKERVEGG---KRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARL 61

Query: 63  PLLGTDPTNFLLYSSN-----IALNPNEAIGSKQARNFVLCKKEGT---------TPKRM 122
           PLLGT  +NFLLYSS+      +LNP E IGSKQARNFVLCKK  T           K M
Sbjct: 62  PLLGTHASNFLLYSSDSEDPYASLNPRETIGSKQARNFVLCKKAATPSPLPADQKMKKLM 121

Query: 123 TIKESHGWKAWINKSLNFKILSH 132
           T+KESHGWKAWIN SL+FKI SH
Sbjct: 122 TLKESHGWKAWINNSLSFKIPSH 141

[Close]
BLAST of CsaV3_3G017900 vs. NCBI nr
Match: XP_022934727.1 (uncharacterized protein LOC111441823 [Cucurbita moschata])

HSP 1 Score: 167.9 bits (424), Expect = 2.3e-38
Identity = 87/121 (71.90%), Postives = 95/121 (78.51%), Query Frame = 0 

Query: 20  KRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQARLPLLGTDPTNFLLYSSN- 79
           KR+LI++NV+GSSGPLRFV KEEDLVCEVIH ALKSYARQARLPLLGT  +NFLLYSSN 
Sbjct: 16  KRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNS 75

Query: 80  ----IALNPNEAIGSKQARNFVLCKKEGTT---------PKRMTIKESHGWKAWINKSLN 127
                +LNP E IGSKQARNFVLCKK  T           K MT+KESHGWKAWINKSL+
Sbjct: 76  EDPYASLNPMETIGSKQARNFVLCKKVATASPLPADQNMKKLMTLKESHGWKAWINKSLS 135

[Close]
BLAST of CsaV3_3G017900 vs. NCBI nr
Match: XP_023529063.1 (uncharacterized protein LOC111791812 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 158.3 bits (399), Expect = 1.8e-35
Identity = 87/137 (63.50%), Postives = 98/137 (71.53%), Query Frame = 0 

Query: 3   RSLSNNNKHRRDDAKEIKRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQARL 62
           + L   NK R +     KR+L+++NV+GSSGPLRFV KEEDLV EVIH ALKSYARQARL
Sbjct: 2   KGLGLRNKERVEGG---KRLLVSVNVVGSSGPLRFVAKEEDLVSEVIHAALKSYARQARL 61

Query: 63  PLLGTDPTNFLLYSSN-----IALNPNEAIGSKQARNFVLCKKEGTT---------PKRM 122
           P LGT  +NFLLYSSN      +LNP E IGSKQARNFVLCKK  T           K M
Sbjct: 62  PHLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCKKAATASPLPADQNMKKLM 121

Query: 123 TIKESHGWKAWINKSLN 126
           T+KESHGWKAWINKSL+
Sbjct: 122 TLKESHGWKAWINKSLS 135

[Close]
BLAST of CsaV3_3G017900 vs. TAIR10
Match: AT1G70780.1 (unknown protein)

HSP 1 Score: 115.2 bits (287), Expect = 3.2e-26
Identity = 64/140 (45.71%), Postives = 88/140 (62.86%), Query Frame = 0 

Query: 9   NKHRRDDAKEIKRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQARLPLLGTD 68
           NK +++   +  R+LI++ V+GS+GP+RFV  E+DLV  VI  ALK YAR+ RLPLLG+D
Sbjct: 5   NKQKKNQNAKGNRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPLLGSD 64

Query: 69  PTNFLLYSSNI---ALNPNEAIGSKQARNFVLCKKEGTTPKRMTIKESHG---------- 128
             +FLLY   +   AL+  +AIGS  ARNF+LC+K    P+   ++ES+G          
Sbjct: 65  FNDFLLYCPMVGPEALSTWDAIGSLGARNFMLCRK----PEEKKVEESNGRSDSTINGAR 124

Query: 129 ----WKAWINKSLNFKILSH 132
                KAWINKS N K+ SH
Sbjct: 125 KGGSLKAWINKSFNLKVSSH 140

[Close]
BLAST of CsaV3_3G017900 vs. TAIR10
Match: AT1G23150.1 (unknown protein)

HSP 1 Score: 107.1 bits (266), Expect = 8.6e-24
Identity = 58/130 (44.62%), Postives = 79/130 (60.77%), Query Frame = 0 

Query: 21  RVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQARLPLLGTDPTNFLLYSSNI- 80
           R+LI++  +GS+GP+RFV  E DLV  VI  ALK YAR+ RLP+LG+D  +F+ Y   + 
Sbjct: 15  RILISVTFLGSAGPIRFVANEGDLVASVIDTALKCYAREGRLPILGSDFNDFVFYCPMVG 74

Query: 81  --ALNPNEAIGSKQARNFVLCKKEGTTPKRMTIKESHG----------------WKAWIN 132
             AL+P EAIGS   RNF+LCKK+   P+   ++E  G                +KAWIN
Sbjct: 75  PGALSPWEAIGSVGVRNFMLCKKK---PEEKKVEEDKGRSNFPINGARKGAGGSFKAWIN 134

[Close]
BLAST of CsaV3_3G017900 vs. TAIR10
Match: AT5G37730.1 (unknown protein)

HSP 1 Score: 97.1 bits (240), Expect = 8.9e-21
Identity = 49/107 (45.79%), Postives = 69/107 (64.49%), Query Frame = 0 

Query: 20  KRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQARLPLLGTDPTNFLLYSSNI 79
           K++L+++NV+GS GP+RF+  E+D V   I+  LK+YARQ R+P+LG D  NF+ YS N 
Sbjct: 16  KKLLVSVNVLGSVGPIRFLANEDDEVSSAINTTLKAYARQGRIPVLGFDVDNFIFYSINA 75

Query: 80  ALN---PNEAIGSKQARNFVLCKKEGTTPKRMT-IKES-----HGWK 118
             N   P E IGS    NF++CKKE    +++  I+ES     HGWK
Sbjct: 76  GFNTLHPQEKIGSMDVTNFLMCKKEPRPLEKVEGIRESRARIGHGWK 122

[Close]
BLAST of CsaV3_3G017900 vs. TAIR10
Match: AT4G22758.1 (unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.2e-06
Identity = 34/102 (33.33%), Postives = 55/102 (53.92%), Query Frame = 0 

Query: 6   SNNNKHRRDDAKEIKRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQARLPLL 65
           S++  ++  + KE  +V+I++ V GS GP+R +VK    V E I I +  Y ++ R P L
Sbjct: 108 SSSPINQEGNTKEAPKVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKL 167

Query: 66  GTDPTNFLLYSSNIA---LNPNEAIGSKQARNFVLCKKEGTT 105
             D + F L+ S+ +   L   E IG   +R+F + KK   T
Sbjct: 168 DRD-SAFELHQSHFSIQCLEKREIIGELGSRSFYMRKKAPET 208

[Close]
BLAST of CsaV3_3G017900 vs. TAIR10
Match: AT2G01554.1 (unknown protein)

HSP 1 Score: 45.4 bits (106), Expect = 3.1e-05
Identity = 42/132 (31.82%), Postives = 56/132 (42.42%), Query Frame = 0 

Query: 8   NNKHRRDD-AKEIKRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQARLPLLG 67
           NNKH+R+  +K   R L++INV+GS+G   F    + +      IAL        +PL G
Sbjct: 4   NNKHQRNQKSKTTNRFLVSINVLGSAG-FHF---SDQIPAFSDFIAL-------TVPLKG 63

Query: 68  TDPTNFLLYSSNIALNPNEAIGSKQARNFVLCKK-------EGTTPKRMTIKESHGWKAW 127
                               IGS  +RNFVL  K       +       T K S  WKAW
Sbjct: 64  -------------------KIGSTGSRNFVLSNKLETQNLEDSMMTTTTTRKTSGRWKAW 105

Query: 128 INKSLNFKILSH 132
           +NKS    + SH
Sbjct: 124 LNKSFGLMVPSH 105

[Close]
BLAST of CsaV3_3G017900 vs. Swiss-Prot
Match: sp|Q56XJ7|Y4276_ARATH (Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-05
Identity = 34/102 (33.33%), Postives = 55/102 (53.92%), Query Frame = 0 

Query: 6   SNNNKHRRDDAKEIKRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQARLPLL 65
           S++  ++  + KE  +V+I++ V GS GP+R +VK    V E I I +  Y ++ R P L
Sbjct: 108 SSSPINQEGNTKEAPKVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKL 167

Query: 66  GTDPTNFLLYSSNIA---LNPNEAIGSKQARNFVLCKKEGTT 105
             D + F L+ S+ +   L   E IG   +R+F + KK   T
Sbjct: 168 DRD-SAFELHQSHFSIQCLEKREIIGELGSRSFYMRKKAPET 208

[Close]
BLAST of CsaV3_3G017900 vs. TrEMBL
Match: tr|A0A0A0LBQ6|A0A0A0LBQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G190360 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 5.3e-68
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MKRSLSNNNKHRRDDAKEIKRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQA 60
           MKRSLSNNNKHRRDDAKEIKRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQA
Sbjct: 1   MKRSLSNNNKHRRDDAKEIKRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQA 60

Query: 61  RLPLLGTDPTNFLLYSSNIALNPNEAIGSKQARNFVLCKKEGTTPKRMTIKESHGWKAWI 120
           RLPLLGTDPTNFLLYSSNIALNPNEAIGSKQARNFVLCKKEGTTPKRMTIKESHGWKAWI
Sbjct: 61  RLPLLGTDPTNFLLYSSNIALNPNEAIGSKQARNFVLCKKEGTTPKRMTIKESHGWKAWI 120

Query: 121 NKSLNFKILSH 132
           NKSLNFKILSH
Sbjct: 121 NKSLNFKILSH 131

[Close]
BLAST of CsaV3_3G017900 vs. TrEMBL
Match: tr|V7CYY7|V7CYY7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G230600g PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.5e-30
Identity = 79/141 (56.03%), Postives = 96/141 (68.09%), Query Frame = 0 

Query: 2   KRSLSNNNKHRRDDAKEIK--RVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQ 61
           K  L  N K R +D K  K  R L+TIN+MGS+GP+RFVV E+++V EVI  ALKSYAR+
Sbjct: 7   KMVLQKNKKGRYEDEKRKKSTRFLVTINIMGSAGPIRFVVNEKEVVSEVIETALKSYARE 66

Query: 62  ARLPLLGTDPTNFLLYSSNI---ALNPNEAIGSKQARNFVLCKKE----GTTPKRMTI-- 121
            RLP+LG D TNF LYS+N    AL+P E IGS   RNFVLCKK+     T P+   +  
Sbjct: 67  GRLPVLGFDATNFFLYSANAGFDALSPLEPIGSFGVRNFVLCKKQVYSSNTAPQSELVSQ 126

Query: 122 KESHGWKAWINKSLNFKILSH 132
           K S GWKAW+NKSL  KIL+H
Sbjct: 127 KSSGGWKAWLNKSLGLKILTH 147

[Close]
BLAST of CsaV3_3G017900 vs. TrEMBL
Match: tr|A0A2C9WBT1|A0A2C9WBT1_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G075800 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 7.4e-30
Identity = 77/144 (53.47%), Postives = 98/144 (68.06%), Query Frame = 0 

Query: 1   MKRSLS-----NNNKHRRDDAKEIKRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKS 60
           MKR++S     +  K + DD K   R+LITINV+GS+GP+RFVV E+D V  VI  ALK+
Sbjct: 1   MKRNVSEKLMLHRQKKKGDDKK--NRLLITINVLGSAGPIRFVVNEDDSVAGVIDTALKT 60

Query: 61  YARQARLPLLGTDPTNFLLYSSNI---ALNPNEAIGSKQARNFVLCKKEGTTP-----KR 120
           Y+R+ RLP+LG+D  NFLLY +N    ALNP EAIGS   RNFVLCKK+G          
Sbjct: 61  YSREGRLPVLGSDINNFLLYCANAGSDALNPWEAIGSGGGRNFVLCKKQGQPQMTEGRSE 120

Query: 121 MTIKESHGWKAWINKSLNFKILSH 132
           M   ++ GWKAW+NKS +FK+LSH
Sbjct: 121 MIAHKASGWKAWLNKSFSFKVLSH 142

[Close]
BLAST of CsaV3_3G017900 vs. TrEMBL
Match: tr|A0A1S3C4I6|A0A1S3C4I6_CUCME (uncharacterized protein LOC103496795 OS=Cucumis melo OX=3656 GN=LOC103496795 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.8e-29
Identity = 73/143 (51.05%), Postives = 94/143 (65.73%), Query Frame = 0 

Query: 1   MKRSLSNNNKHRRDDAKEIKRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQA 60
           +KRS +N +K    + K   R L++INV+GS+GP+RFV  E+DLVCEVI  +L  YARQ 
Sbjct: 5   LKRSTTNKDKKVNTNTK-CNRFLVSINVLGSTGPVRFVANEDDLVCEVIKTSLTLYARQG 64

Query: 61  RLPLLGTDPTNFLLYSSN----IALNPNEAIGSKQARNFVLCKKEGTT--------PKRM 120
           RLP+LGT+  NF LY  N     AL+P E+IGSKQ R+F+LCKK+GT+          R 
Sbjct: 65  RLPILGTNVDNFFLYRVNDEKRDALSPRESIGSKQVRHFLLCKKQGTSHSLLLNEKTSRQ 124

Query: 121 TIKESHGWKAWINKSLNFKILSH 132
             KE   WK W+NKSLN+ I SH
Sbjct: 125 REKEKGSWKRWLNKSLNYSIQSH 146

[Close]
BLAST of CsaV3_3G017900 vs. TrEMBL
Match: tr|A0A1R3JLA5|A0A1R3JLA5_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_15750 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.7e-29
Identity = 71/137 (51.82%), Postives = 94/137 (68.61%), Query Frame = 0 

Query: 8   NNKHRRDDAKEI-----KRVLITINVMGSSGPLRFVVKEEDLVCEVIHIALKSYARQARL 67
           NN ++++++K       KR LITINV+GS+GPLRF++ E+D V  VI +ALKSYAR+ RL
Sbjct: 17  NNSNKKNESKNAKKSRSKRFLITINVLGSAGPLRFLINEDDAVATVIDVALKSYAREGRL 76

Query: 68  PLLGTDPTNFLLYSSNI---ALNPNEAIGSKQARNFVLCKKE-----GTTPKRMTIKESH 127
           P+LG DP NFLLY +N    AL+P E IGS+  R F+LCKK+           M  ++  
Sbjct: 77  PVLGLDPNNFLLYYANAGSDALSPWEKIGSQGGRAFLLCKKQVQPQMTEARSEMITQKGS 136

Query: 128 GWKAWINKSLNFKILSH 132
           GWKAW+NKS +FKILSH
Sbjct: 137 GWKAWLNKSFSFKILSH 153

The following BLAST results are available for this feature:
BLAST of CsaV3_3G017900 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57466.18.0e-68100.00hypothetical protein Csa_3G190360 [Cucumis sativus][more]
XP_022143447.19.2e-4063.58uncharacterized protein LOC111013321 [Momordica charantia][more]
XP_022983917.12.0e-3965.03uncharacterized protein LOC111482395 [Cucurbita maxima][more]
XP_022934727.12.3e-3871.90uncharacterized protein LOC111441823 [Cucurbita moschata][more]
XP_023529063.11.8e-3563.50uncharacterized protein LOC111791812 [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_3G017900 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G70780.13.2e-2645.71unknown protein[more]
AT1G23150.18.6e-2444.62unknown protein[more]
AT5G37730.18.9e-2145.79unknown protein[more]
AT4G22758.11.2e-0633.33unknown protein[more]
AT2G01554.13.1e-0531.82unknown protein[more]
BLAST of CsaV3_3G017900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q56XJ7|Y4276_ARATH2.2e-0533.33Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 P... [more]
BLAST of CsaV3_3G017900 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LBQ6|A0A0A0LBQ6_CUCSA5.3e-68100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G190360 PE=4 SV=1[more]
tr|V7CYY7|V7CYY7_PHAVU1.5e-3056.03Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G230600g PE=4 ... [more]
tr|A0A2C9WBT1|A0A2C9WBT1_MANES7.4e-3053.47Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G075800 PE=4 SV=... [more]
tr|A0A1S3C4I6|A0A1S3C4I6_CUCME2.8e-2951.05uncharacterized protein LOC103496795 OS=Cucumis melo OX=3656 GN=LOC103496795 PE=... [more]
tr|A0A1R3JLA5|A0A1R3JLA5_9ROSI3.7e-2951.82Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_15750 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G017900.1CsaV3_3G017900.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33270:SF5SUBFAMILY NOT NAMEDcoord: 5..131
NoneNo IPR availablePANTHERPTHR33270FAMILY NOT NAMEDcoord: 5..131

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G017900CSPI03G17830Wild cucumber (PI 183967)cpicucB144
CsaV3_3G017900Cucsa.108630Cucumber (Gy14) v1cgycucB137
CsaV3_3G017900CmaCh14G008730Cucurbita maxima (Rimu)cmacucB0285
CsaV3_3G017900CmoCh14G008900Cucurbita moschata (Rifu)cmocucB0276
CsaV3_3G017900Cp4.1LG03g05660Cucurbita pepo (Zucchini)cpecucB0753
CsaV3_3G017900ClCG05G010590Watermelon (Charleston Gray)cucwcgB238
CsaV3_3G017900Lsi05G002680Bottle gourd (USVL1VR-Ls)cuclsiB230
CsaV3_3G017900Cla97C05G092940Watermelon (97103) v2cucwmbB217
CsaV3_3G017900Bhi01G001311Wax gourdcucwgoB287
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G017900Silver-seed gourdcarcucB0203
CsaV3_3G017900Silver-seed gourdcarcucB0802
CsaV3_3G017900Cucumber (Gy14) v2cgybcucB117
CsaV3_3G017900Cucurbita maxima (Rimu)cmacucB0550
CsaV3_3G017900Cucurbita moschata (Rifu)cmocucB0535
CsaV3_3G017900Cucurbita pepo (Zucchini)cpecucB0689
CsaV3_3G017900Melon (DHL92) v3.5.1cucmeB247
CsaV3_3G017900Melon (DHL92) v3.6.1cucmedB246
CsaV3_3G017900Watermelon (97103) v1cucwmB252