Lsi05G002030 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G002030
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Protein-protein interaction regulator family protein
Location	chr05 : 2787757 .. 2792988 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAACTAACGCCGCTGCTGTCGAGAAAACGGAGGACGATCTTCGCAAAGAGATCGATGAGCTTCAACGTCAACAACGGGAGGTCCTTCCTTTTTCTTCTTCATCTTTTTTTTCTGTCTTCAAATTCTTTCTTCGCTTTTGTTCTTTCCTTTTTCCGATACTCACTGATGCATTGCTGGTGTTTCAGATTACAGAACGGCTTCGTGATCCTCGCGGACTCCGGAGGGGGGGATTTCCCGGACCTGGCCCAAGAAACTTCGCCGCTAATGGACCACGTCGGGGATTTGTTCGACCTGTAACTTAATCTCCTCTTTTTGTACCTATTTTACGCGCGTATTATCTCTCTAGTCGTTATGTTTATTGTTATTTTCGTGCCGCATGAAGCTTGGTTTTAATTTTAATAATTGCATCCCTTTGGCAGTTTGGGTGGAAAACATGACGAGTTCTTTCGTTTTTCTTATTGAACTGTAAACAATTGAGGATATACTGATAATTCGAGTGATACGCTTCAGGGGGAAAGGAACGATGCTGAAGACCAGCCTCCTGCTAAGCGGCGGCTATCGTCTGCTGTTGTTAAGGTGAGTCTCAGAAGTTGGTTTATTTTTTTTGGGTTTCTTGCTTGGGGTGTTCTTAACAGTTTTTTTTATGTTTTAGTCTAATCTCGTTTGCGCAGAAATCTTTTTTGGGTTTTGTTGCTAGAATTAGAAATTATGCAAGATAACCTAATGAGCATGAAAGATTTGCTTGGTTGGCCTCATAATTTTCTTCAAACCATGACTGGCATGTCGTTCATTTGCATAGTTTAACATTTACCCTTTTTTATCTCTACTTTGTAATAAATATTGGAGCACAGATGGAGGAGGATGGGGAGATAAATGAAGAAGCTGAAGGAAAGGATGCAATGAAGGATACATCTCGGGAAGAAACTTCTGGAAGTGATACAGCCTTCCAGAACGATGTGAAACAAAATCATTTGCGGCAGAGTGGTTCGTTTAGATTGGATGGAAATAAAAGAGCAGCTAGGATGGTAATTTCCATGTATACTGTCTTTTAATCATCTTCACAATTCTCTGGTTTGATGCCCCGCAGCAAAAGTCTCTCAAAGCTTTGTTTTATAATTTATATCAGGATTTTGAAGTTCCAGCTGCAGAAAATGTTCCGAGGATATTGCCTAAGAATGAGGATCCTAGCTTAGTTAGCAGGAACAAGAGAATGCTGGGTCAGCTTTTGGGAACATTAGAGGTATTTGTAAAATGATTGATTGGGTTAAATCTGTCATGTGTTGCATCGTTTTTCCAGCTTCAATTGTCTAATCTTTGCACTTGAGAGAAATGGGTTGAAAATATTTATTTTATGTTTCCAATCTTTTTATTAAAAATTTTGTTCCGACCATTGAGCATTTACTCATATTGGCAAGTATATTCCAAAAAAGAAGTATATGGTGGCTTGCAATCAACTTTACAGACAGATAAATAGATATTTCTGGATAAGCAAGTGAATGCAATCCATGGAGAACTTAAAATGTAGAGGATAGGCTAGAGAAAATAAATTTTAAGATGCAAATCTAGATTTTATGTTGATTAGATACTTTAAGTAGATGCATGTACATTTAAAGTATTGTGTTACCTGGCTAAAAGAAATCATGAATAAACTACAATACATTGATTATTGTAGGACTTTTATGTTTTATCCTGTTTGTGTGGGTTCTCTACCATTCATGAAGATGTTGCTCAAAAGTTCAAAACCAAATTTCCTGAAGGGCTGCTATATCATAATTATCTGTCATTAGCCTAGTCTCAACTACTGTGTGTGTGTGTGTGTGTGGGGCATCATATTACCAAGTTCTGGTGCTTATGCATTTTATTTTGTATAAATCTTCAGAAATTCAGGAAGGAAGACAAGCAACTCTCAGGAACTGAAGCTTTCATGAGAAGATCAGATTCTTTACAAAGAGTGAGTTATTATATGTCCTTTTGTAAAATTTAACTTCCTAGTATGTCTGAAGCTGATTTCCCCTGTTGATAATTTTTAAAGGCTGAGCAAAGAGCACGAGAGGAAAGTGAAAGATTGAGGCAACAAGAGCGTGAACAAATTGTAGAGAAACGAAAGAGAGATCTGGTCTGTAATTCAGTGAAAGACTAAAATAGATAAATATCTATGAGGTTTGAATCTATAATTATTGTTTTTTTTAACCACTTCTATCTTCCACTTCTTTAGATGCTCAGAGCTCGCGTGGCTGCTAAGGCAGAAGAAAAGAAGTTGGAATTACTTTTTCTTCGATGGAGCGAGCACCATAAAAAACTTTGCAATTTTATAAGGTCTGGTTGTGTTTAATTTTCATGAAAGCATTTTCTGTTGTCACTTCTGAGATTACCAAGCTAGATCATTAATCTCACTTTCCTATTTATGCAGGTTATTTTTAATTTTGGTCCAAAAGTGTCCATATTCACATTTTATTGAGACAAAGATAAGTTTCCGTTCATGAATAGTGCTGAACTAAATTCATGGGTTTTGATTAAAAAAAGATATTAAAGAATACTGACCTATGTTTTCTTTTATGCTTGAACTTAAATTGTATTTGAAGGTTATTTTTCTTCTTTGTAATAGAATTCCCCTTTGAGTTTTGAGGGTACTTTTTCACGAAGTTTGTATTTTCCAGGACAAAGACTGAACCTTCAATTTATTATTTGCCAAACAAACCATTGGACGAGGATGCAACCTTGGCTGAGCAGCGAAGAGACGAGGTTAGTGCCTAGTTTGATATTTTCCTTGAAAAGGCAATTTTGCTTAGAGATCTTCTGCAAATCAACTGCCTTAGCCTTTGAGAGCCTAATACTGTTCGAGTACTCAGCTTCCAAGTTGGTTTAGTTTGAATTTAATGTCTCCCTTTAATTGAATTGGGAGATTTTATTTGATGTAATTGTTTGAATCTGAATATAGTTGAGTCCCATTTTTTACTGGGAGAATGGGGATCGGGCTGCAACTATGCATACATATATAGATATATAAAACATATATAGATGTCTCCCTTTAATTGAATTGGGAGATTTTATTTGATGTAATTGGTTGAATCTGAAACCCACCTCACCTTTGGTAATGTTTTATATAGATATATAAAACATCACCAATGGTGAAGTTGGTTGCATGTTGATGATGCCATTGAGCTGGATAATTTATTTACATATTGATCTCATAAGTATTTGCCCATTCACTTATTTTATCACAAAAATGCATTTCAGGCTTTTATGGAGTGGAAAGCCTCCAGAAGGGAGGAGTTATCTGAGTATCAGAAACAGATAGGAGAACAGTATATTGCAAATGTTGAGAAGGATTTGGAAAGGTGGCAAAATGCCAGGAGAGCAAGAAAAGGAAATAACGACGTATCGAATTTGCAGGAAACCATGGACAAAGAATTGGACACCCATAGACTTGAGCATGGTCCAAAGAAAAGGAACATCCCTGGTGGTAGCAACAACGAGGACGAGGATGACGTGGAAGATATTAACGTTGGGGAGGACGACATGATAGATGACGTACTCGGTGTTGAAGATAATGGGCGCAGAGGCGAGGAAACAGCAAAACCCGAAGCTGATGTAGTGAGTCCAAAAGCTGATAATACTGTGCAGTAGAAGCTGTAAGTACCTATTTGATTTCATGTAGTAGTCCTATGTTTGTGTTTGTATCTGTCCTTGATTTGTCTTAATAGTTTTATTCTTCTTGCTTTTTTAAATTATTGTTTTGTGTTTTTCAAATCCGTACCAATGGGTTCCACACACTCTTCGATTCTACTTTTTTCACAGTCTTCATAGAATTGGTAGGATGCTTAGTCACCAAGTTTGTTCAAGCATGACTTGTAAAATATCTCAACTTCTTTCAAGTCTGACATCAGAAACGTACTTATGTTGCAATTTCTTTTCTATTGAATATTATTTGTCCTTTTCTTTTTCATTGATTGATTGAATATTATTAGCTATAGAAACTAATCGACCATTATAAACTGTTGATTGACCTTGACCTTGACCAAAGAACGGAAAATTCTTTATTCCATTCTGTTGAATGGTAATTTTAAAAGGTTATTTTAGGGGTAATTTATTCACATTTATCAATTCACAATATGGCGAGTATATGATCAATTAATAGTTGACAAATTGGTTGATTTATTATGGAATCAATTTCAAAGATTGCATGGTTGATGTTTGTTGGATTCTTGTTTTTTCTAGGAAGAGTTTGTTTTAGCTAAAACGAGCTATGTAGATAAGGCACCAATTTTGATCTTTCGATCTTTCACTTGAACGTAAAGACGATTAAAGTAGAGGCAGCTTCAACACTCTTGATTATCATCAAATAGAGTGATTTTTAAATGAACAGAAATTGTTTGAATTACATTGAAAATTATTGGATTGATGTTCGGCTTATACGAGAAATTGAGCATTATTGTTTTGATTCTTGATTTAGGGGATAATTGAATCAAATCTAACGCGCCTGTCTTTTCACTAGGAACATATCTTTACGTTTTAAGATAGTTTTTAGGGGAGATGTTATGATAGTCTATTCTTTCTTAAATTGCTTGCAAAAGAAATTATGCTTGTGTTCCTTTTCAAAGTTATCTTAATTATTATTTTTTTTTTTTAAAAAAAAAAGGGCAGGTCTTGTTAAGGATTTTACATTTATATTTAGTATATAGTACTTGTAGTAGTGGAAAGTGTTTGATATATTCTGTGGGGTTGGTTTTGATATTTTAAACAATAGTTCTAGTCTAATTTGAGAAGGCTTCATTAATTTTTTTTTATCAACTAGAATTTTTTTAATTAAAAATCATGAAGAGATTGCGATTTTCTTTTATTAAAAAAAATTAAAACATCAAATATGTATACATTTTTTTTAATTAAAACAACTGTGTATTTCAAATTGCAGGGTGAAGGATTGATATTCATCAACTGAACACAATTTAGATTGTATACGTGAGTGAGGAGGGATCAGCGTGAAAATAATATCGAAGTGCTTCATACGGGTGAAAAAAAGGATAAAATTAATTGGGTAGGTAGGTATAGACATGATATTAAATTTTAGAAGTGTAAACATATTCTTGATATTTTATGTATGGGTTTGATACCAACCTAAAGAAAATCAACATTTTCATTATGTTATTACATTACCAAACTGTATTAAAAATTGGTGTAATCATAATAAAATTTCATTTATGGATCAATTGTAATGAGCTTGAATCACG

mRNA sequence

ATGGGAACTAACGCCGCTGCTGTCGAGAAAACGGAGGACGATCTTCGCAAAGAGATCGATGAGCTTCAACGTCAACAACGGGAGGTCCTTCCTTTTTCTTCTTCATCTTTTTTTTCTGTCTTCAAATTCTTTCTTCGCTTTTGTTCTTTCCTTTTTCCGATACTCACTGATGCATTGCTGGTGTTTCAGATTACAGAACGGCTTCGTGATCCTCGCGGACTCCGGAGGGGGGGATTTCCCGGACCTGGCCCAAGAAACTTCGCCGCTAATGGACCACGTCGGGGATTTGTTCGACCTGGGGAAAGGAACGATGCTGAAGACCAGCCTCCTGCTAAGCGGCGGCTATCGTCTGCTGTTGTTAAGGTGAGTCTCAGAACACAGATGGAGGAGGATGGGGAGATAAATGAAGAAGCTGAAGGAAAGGATGCAATGAAGGATACATCTCGGGAAGAAACTTCTGGAAGTGATACAGCCTTCCAGAACGATGTGAAACAAAATCATTTGCGGCAGAGTGGTTCGTTTAGATTGGATGGAAATAAAAGAGCAGCTAGGATGGATTTTGAAGTTCCAGCTGCAGAAAATGTTCCGAGGATATTGCCTAAGAATGAGGATCCTAGCTTAGTTAGCAGGAACAAGAGAATGCTGGGTCAGCTTTTGGGAACATTAGAGAAATTCAGGAAGGAAGACAAGCAACTCTCAGGAACTGAAGCTTTCATGAGAAGATCAGATTCTTTACAAAGAGCTGAGCAAAGAGCACGAGAGGAAAGTGAAAGATTGAGGCAACAAGAGCGTGAACAAATTGTAGAGAAACGAAAGAGAGATCTGGTCTGTAATTCAATGCTCAGAGCTCGCGTGGCTGCTAAGGCAGAAGAAAAGAAGTTGGAATTACTTTTTCTTCGATGGAGCGAGCACCATAAAAAACTTTGCAATTTTATAAGGTCTGGTTGTAATTCCCCTTTGAGTTTTGAGGGTACTTTTTCACGAAGTTTGTATTTTCCAGGACAAAGACTGAACCTTCAATTTATTATTTGCCAAACAAACCATTGGACGAGGATGCAACCTTGGCTGAGCAGCGAAGAGACGAGGTTAGTGCCTAGTTTGATATTTTCCTTGAAAAGGCAATTTTGCTTAGAGATCTTCTGCAAATCAACTGCCTTAGCCTTTGAGAGCCTAATACTGTTCGAGTACTCAGCTTCCAAGTTGGCTTTTATGGAGTGGAAAGCCTCCAGAAGGGAGGAGTTATCTGAGTATCAGAAACAGATAGGAGAACAGTATATTGCAAATGTTGAGAAGGATTTGGAAAGGTGGCAAAATGCCAGGAGAGCAAGAAAAGGAAATAACGACGTATCGAATTTGCAGGAAACCATGGACAAAGAATTGGACACCCATAGACTTGAGCATGGTCCAAAGAAAAGGAACATCCCTGGTGGTAGCAACAACGAGGACGAGGATGACGTGGAAGATATTAACGTTGGGGAGGACGACATGATAGATGACGTACTCGGTGTTGAAGATAATGGGCGCAGAGGCGAGGAAACAGCAAAACCCGAAGCTGATGTAGTGAGTCCAAAAGCTGATAATACTGTGCAGTAGAAGCTGGTGAAGGATTGATATTCATCAACTGAACACAATTTAGATTGTATACGTGAGTGAGGAGGGATCAGCGTGAAAATAATATCGAAGTGCTTCATACGGGTGAAAAAAAGGATAAAATTAATTGGGTAGGTAGGTATAGACATGATATTAAATTTTAGAAGTGTAAACATATTCTTGATATTTTATGTATGGGTTTGATACCAACCTAAAGAAAATCAACATTTTCATTATGTTATTACATTACCAAACTGTATTAAAAATTGGTGTAATCATAATAAAATTTCATTTATGGATCAATTGTAATGAGCTTGAATCACG

Coding sequence (CDS)

ATGGGAACTAACGCCGCTGCTGTCGAGAAAACGGAGGACGATCTTCGCAAAGAGATCGATGAGCTTCAACGTCAACAACGGGAGGTCCTTCCTTTTTCTTCTTCATCTTTTTTTTCTGTCTTCAAATTCTTTCTTCGCTTTTGTTCTTTCCTTTTTCCGATACTCACTGATGCATTGCTGGTGTTTCAGATTACAGAACGGCTTCGTGATCCTCGCGGACTCCGGAGGGGGGGATTTCCCGGACCTGGCCCAAGAAACTTCGCCGCTAATGGACCACGTCGGGGATTTGTTCGACCTGGGGAAAGGAACGATGCTGAAGACCAGCCTCCTGCTAAGCGGCGGCTATCGTCTGCTGTTGTTAAGGTGAGTCTCAGAACACAGATGGAGGAGGATGGGGAGATAAATGAAGAAGCTGAAGGAAAGGATGCAATGAAGGATACATCTCGGGAAGAAACTTCTGGAAGTGATACAGCCTTCCAGAACGATGTGAAACAAAATCATTTGCGGCAGAGTGGTTCGTTTAGATTGGATGGAAATAAAAGAGCAGCTAGGATGGATTTTGAAGTTCCAGCTGCAGAAAATGTTCCGAGGATATTGCCTAAGAATGAGGATCCTAGCTTAGTTAGCAGGAACAAGAGAATGCTGGGTCAGCTTTTGGGAACATTAGAGAAATTCAGGAAGGAAGACAAGCAACTCTCAGGAACTGAAGCTTTCATGAGAAGATCAGATTCTTTACAAAGAGCTGAGCAAAGAGCACGAGAGGAAAGTGAAAGATTGAGGCAACAAGAGCGTGAACAAATTGTAGAGAAACGAAAGAGAGATCTGGTCTGTAATTCAATGCTCAGAGCTCGCGTGGCTGCTAAGGCAGAAGAAAAGAAGTTGGAATTACTTTTTCTTCGATGGAGCGAGCACCATAAAAAACTTTGCAATTTTATAAGGTCTGGTTGTAATTCCCCTTTGAGTTTTGAGGGTACTTTTTCACGAAGTTTGTATTTTCCAGGACAAAGACTGAACCTTCAATTTATTATTTGCCAAACAAACCATTGGACGAGGATGCAACCTTGGCTGAGCAGCGAAGAGACGAGGTTAGTGCCTAGTTTGATATTTTCCTTGAAAAGGCAATTTTGCTTAGAGATCTTCTGCAAATCAACTGCCTTAGCCTTTGAGAGCCTAATACTGTTCGAGTACTCAGCTTCCAAGTTGGCTTTTATGGAGTGGAAAGCCTCCAGAAGGGAGGAGTTATCTGAGTATCAGAAACAGATAGGAGAACAGTATATTGCAAATGTTGAGAAGGATTTGGAAAGGTGGCAAAATGCCAGGAGAGCAAGAAAAGGAAATAACGACGTATCGAATTTGCAGGAAACCATGGACAAAGAATTGGACACCCATAGACTTGAGCATGGTCCAAAGAAAAGGAACATCCCTGGTGGTAGCAACAACGAGGACGAGGATGACGTGGAAGATATTAACGTTGGGGAGGACGACATGATAGATGACGTACTCGGTGTTGAAGATAATGGGCGCAGAGGCGAGGAAACAGCAAAACCCGAAGCTGATGTAGTGAGTCCAAAAGCTGATAATACTGTGCAGTAG

Protein sequence

MGTNAAAVEKTEDDLRKEIDELQRQQREVLPFSSSSFFSVFKFFLRFCSFLFPILTDALLVFQITERLRDPRGLRRGGFPGPGPRNFAANGPRRGFVRPGERNDAEDQPPAKRRLSSAVVKVSLRTQMEEDGEINEEAEGKDAMKDTSREETSGSDTAFQNDVKQNHLRQSGSFRLDGNKRAARMDFEVPAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGTEAFMRRSDSLQRAEQRAREESERLRQQEREQIVEKRKRDLVCNSMLRARVAAKAEEKKLELLFLRWSEHHKKLCNFIRSGCNSPLSFEGTFSRSLYFPGQRLNLQFIICQTNHWTRMQPWLSSEETRLVPSLIFSLKRQFCLEIFCKSTALAFESLILFEYSASKLAFMEWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINVGEDDMIDDVLGVEDNGRRGEETAKPEADVVSPKADNTVQ

Homology

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BLAST of Lsi05G002030 vs. TrEMBL
Match: A0A0A0L734_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G209450 PE=4 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 1.2e-154
Identity = 325/469 (69.30%), Postives = 347/469 (73.99%), Query Frame = 1


Query: 63  QITERLRDPRGLRRGGFPGPGPRNFAANGPRRGFVRPGERNDAEDQPPAKRRLSSAVVKV 122
           +ITERLRDPRGLRRGGFPGPGPRNFAANGPRRGFVRPGERNDAEDQPPAKRRLSSAVVK 
Sbjct: 28  EITERLRDPRGLRRGGFPGPGPRNFAANGPRRGFVRPGERNDAEDQPPAKRRLSSAVVK- 87

Query: 123 SLRTQMEEDGEINEEAEGKDAMKDTSREETSGSDTAFQNDVKQNHLRQSGSFRLDGNKRA 182
                M EDGEINEEAEGKDA+KDTSREETSGSD  FQND +QNHLRQSGSFRLDGNKRA
Sbjct: 88  -----MAEDGEINEEAEGKDAVKDTSREETSGSDAVFQNDARQNHLRQSGSFRLDGNKRA 147

Query: 183 ARMDFEVPAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGTEAFMRRS 242
            RMD ++PAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGTEAFMRRS
Sbjct: 148 -RMDIDIPAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGTEAFMRRS 207

Query: 243 DSLQRAEQRAREESERLRQQEREQIVEKRKRDLVCNSMLRARVAAKAEEKKLELLFLRWS 302
           DSLQRAEQRAREESERLRQQEREQI EKRKRDL    MLRARVAAKAEEKKLELLFLRWS
Sbjct: 208 DSLQRAEQRAREESERLRQQEREQIAEKRKRDL----MLRARVAAKAEEKKLELLFLRWS 267

Query: 303 EHHKKLCNFIRSGCNSPLSFEGTFSRSLYFPGQRLNLQFIICQTNHWTRMQPWLSSEETR 362
           EHHKKLCNFIR+     +          Y P + L+    + +         W +S    
Sbjct: 268 EHHKKLCNFIRTKTEPSI---------YYLPNKPLDEDATLAEQQRDEAFMEWKASRREE 327

Query: 363 LVPSLIFSLKRQFCLEIFCKSTALAFESLILFEYSASKLAFME-WKASRREELSEYQKQI 422
           L                        ++  I  +Y A+    +E W+ +RR          
Sbjct: 328 L----------------------SEYQKQIGEQYIANVEKDLERWQNARRA--------- 387

Query: 423 GEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNE 482
                                RKG+NDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNE
Sbjct: 388 ---------------------RKGSNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNE 424

Query: 483 DEDDVEDINVGEDDMIDDVLGVEDNGRRGEETAKPEADVVSPKADNTVQ 531
           DEDDVEDINVGEDDMIDDVL VE+NGRRGEETAKPEADV SPKAD+TVQ
Sbjct: 448 DEDDVEDINVGEDDMIDDVLDVEENGRRGEETAKPEADVASPKADDTVQ 424

[Close]

BLAST of Lsi05G002030 vs. TrEMBL
Match: A0A103Y3D0_CYNCS (Pinin/SDK/MemA protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_019965 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 1.3e-124
Identity = 276/464 (59.48%), Postives = 333/464 (71.77%), Query Frame = 1


Query: 62  FQITERLRDPRGLRRGGFPGPGPRNFAANGP--RRGFVRPGERNDAEDQPPAKRRLSSAV 121
           ++ITERLRDPRG+RRGG  G GPRNF+A+GP  +RGFVRP ERN++EDQP  KRRLSS V
Sbjct: 63  WEITERLRDPRGIRRGGLTGSGPRNFSASGPARQRGFVRPAERNESEDQPAPKRRLSSTV 122

Query: 122 VKVSLRTQMEEDGEINEEA----EGKDAMKDTSREETSGSDTAFQNDVKQNHLRQSGSFR 181
           VK+       E+GEI E+A    +G D+ KD++ E T        N   QN+ + S   R
Sbjct: 123 VKI-------EEGEIVEDAVDASKGDDSNKDSAMEVTGWGG----NGENQNNRKPSNWAR 182

Query: 182 LDGNKRAARMDFEVPAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGT 241
            DG  R ++MD EVP +ENVPR+LPK+EDPSLV+RN+RMLGQLLGTLEKFRKED +LSG+
Sbjct: 183 RDGIHRLSKMDSEVPPSENVPRVLPKDEDPSLVNRNRRMLGQLLGTLEKFRKEDVKLSGS 242

Query: 242 EAFMRRSDSLQRAEQRAREESERLRQQEREQIVEKRKRDLVCNSMLRARVAAKAEEKKLE 301
           EAFMRRSDSL+RAEQRAREESERLRQQEREQI EKR+RDL     LRARVAAKAEEKKLE
Sbjct: 243 EAFMRRSDSLKRAEQRAREESERLRQQEREQIAEKRRRDLT----LRARVAAKAEEKKLE 302

Query: 302 LLFLRWSEHHKKLCNFIRSGCNSPLSFEGTFSRSLYFPGQRLNLQFIICQTNHWTRMQPW 361
           LLFLRWSEH KKL NF+R+    P+ +  +F++ L      L       +       +  
Sbjct: 303 LLFLRWSEHQKKLGNFLRTKAEPPIYY--SFAKQLEEDSTVLEQ-----RKEQGLNFEGK 362

Query: 362 LSSEETRLVPSLIFSLKRQFCLEIFCKSTALAFESLILFEYSASKLAFMEWKASRREELS 421
              EE+R         K   C++   +   +    ++       + AF EWKA+RREELS
Sbjct: 363 CWKEESR--------GKIGTCVDENRRKKVVGRRKVV------GEEAFQEWKAARREELS 422

Query: 422 EYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIP 481
           +YQ+QIGEQY+ANVEK+LERWQN R+AR GNND  NLQETMDKEL+THRLEHGPK R IP
Sbjct: 423 KYQQQIGEQYVANVEKELERWQNGRKARNGNNDTLNLQETMDKELETHRLEHGPKTRKIP 482

Query: 482 GGSNNEDEDDVEDINVGEDDMIDDVLGVEDNG-RRGEETAKPEA 519
           GG NNEDEDDVED+NVGEDDM+DDVL V+D+G RR EET KP+A
Sbjct: 483 GGDNNEDEDDVEDMNVGEDDMMDDVLDVDDSGNRRAEETVKPDA 490

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BLAST of Lsi05G002030 vs. TrEMBL
Match: A0A0B2QYS9_GLYSO (Pinin OS=Glycine soja GN=glysoja_011292 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 2.1e-114
Identity = 269/470 (57.23%), Postives = 323/470 (68.72%), Query Frame = 1


Query: 63  QITERLRDPRGLRRGGFPGPGPRNFAANGPR-RGFVRPGERNDAEDQPPAKRRLSSAVVK 122
           +I+ERLRDPRGLRRG  PGP       NG R R F+RPG+RND+EDQPP+KRRLSSAVVK
Sbjct: 23  EISERLRDPRGLRRGALPGPPA--LRTNGVRQRPFIRPGDRNDSEDQPPSKRRLSSAVVK 82

Query: 123 VSLRTQMEEDGEINEEAEGKDA---MKDTSREETSGSDTAFQNDVKQNHLRQSGSFRLDG 182
           V       +DG++ E+A+        KD + E  +G+    QND    +  QSG  + D 
Sbjct: 83  V-------DDGDLPEDADAGQEDGKTKDLTNEAVNGTAALVQNDSNPFNSHQSGWSKRDI 142

Query: 183 NKRAARMDFEVPAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGTEAF 242
           + +      +VP  ++VPR+LPKNEDPSLV+RNKRMLGQLLGTLEKFRKED QLSGTEA+
Sbjct: 143 SNQKTSKASDVPNTDHVPRVLPKNEDPSLVNRNKRMLGQLLGTLEKFRKEDMQLSGTEAY 202

Query: 243 MRRSDSLQRAEQRAREESERLRQQEREQIVEKRKRDLVCNSMLRARVAAKAEEKKLELLF 302
           MRRS+SLQRAEQRAREESERLR++EREQI EKR+RDL     LRARVAAK EEKKLELLF
Sbjct: 203 MRRSNSLQRAEQRAREESERLRKEEREQIAEKRRRDLT----LRARVAAKTEEKKLELLF 262

Query: 303 LRWSEHHKKLCNFIRSGCNSPLSFEGTFSRSLYFPGQRLNLQFIICQTNHWTRMQPWLSS 362
           L+WSEH K+L NFIR+    P+          Y P + L+    + +             
Sbjct: 263 LQWSEHRKRLSNFIRTKAEPPI---------YYLPNKPLDEDPTLLEKR---------KE 322

Query: 363 EETRLVPSLIFSLKRQFCLEIFCKSTALAFESLILFEYSASKLAFMEWKASRREELSEYQ 422
           E  +L   + F L     +  FC S   A   L + +     +AF+EWK +RREE+SEYQ
Sbjct: 323 EVVKLGNLISFGLH---LIASFC-SPWTAIPDLPV-KSPPILMAFLEWKNARREEVSEYQ 382

Query: 423 KQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGS 482
           KQIGEQY+ANVEK+LERWQNAR ARK NND  NLQETMDKELDTHRLEHGPKKR IP G+
Sbjct: 383 KQIGEQYLANVEKELERWQNARNARKVNND-QNLQETMDKELDTHRLEHGPKKRKIPDGN 442

Query: 483 NNEDEDDVEDINVGEDDMIDDVLGVEDNGRRGEETAKPEADVVS--PKAD 527
           NNED+DDVEDINVGEDDM+DD L  +D+GRR ++T K EA   S  P AD
Sbjct: 443 NNEDDDDVEDINVGEDDMMDDELD-DDSGRRIDDTTKTEAGNASTDPVAD 454

[Close]

BLAST of Lsi05G002030 vs. TrEMBL
Match: W9SBD9_9ROSA (Putative WRKY transcription factor 9 OS=Morus notabilis GN=L484_024154 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 3.1e-105
Identity = 250/470 (53.19%), Postives = 297/470 (63.19%), Query Frame = 1


Query: 63  QITERLRDPRGLRRGGFPGPGPRNFAANGPR-RGFVRPGERNDAEDQPPAKRRLSSAVVK 122
           +ITERLRDPRGLRRG  P  GPRNFAANG R RGF RP +R +AEDQPPAKRRLSSAVVK
Sbjct: 383 EITERLRDPRGLRRGRVPAAGPRNFAANGARQRGFTRPADRPEAEDQPPAKRRLSSAVVK 442

Query: 123 VSLRTQMEEDGEINEEA-EGKDAMKDTSREETSGSDTAFQNDVKQNHLRQSGSFRLDGNK 182
           V       EDGE  E+A E  D  KD S +E +              L+Q+G  R D N+
Sbjct: 443 V-------EDGESTEDAHETNDVNKDDSDKEAT-----------PRSLQQTGWSRRDENQ 502

Query: 183 RAARMDFEVPAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGTEAFMR 242
           RA +MD ++P+ E+VPR+LPK+EDPSLV+RN+RMLGQLLGTLEKFRKED QLSGTEAFMR
Sbjct: 503 RATKMDSDIPSNEHVPRVLPKDEDPSLVNRNRRMLGQLLGTLEKFRKEDMQLSGTEAFMR 562

Query: 243 RSDSLQRAEQRAREESERLRQQEREQIVEKRKRDLVCNSMLRARVAAKAEEKKLELLFLR 302
           RS+SLQRAEQRAREESERLRQQERE+I EKR+RDL     LRARV+AK EEKKLELLFL+
Sbjct: 563 RSNSLQRAEQRAREESERLRQQEREKIAEKRRRDLT----LRARVSAKTEEKKLELLFLQ 622

Query: 303 WSEHHKKLCNFIRSGCNSPLSFEGTFSRSLYFPGQRLNLQFIICQTNHWTRMQPWLSSEE 362
           WSEHH+KLCNFIR+    P+          Y P + L       +       + W ++  
Sbjct: 623 WSEHHRKLCNFIRTKTEPPI---------YYLPKKPLEEDATAVEQRKEQAFEEWKAARR 682

Query: 363 TRLVPSLIFSLKRQFCLEIFCKSTALAFESLILFEYSASKLAFME-WKASRREELSEYQK 422
             L                        ++  I  +Y A+    +E W+ +R         
Sbjct: 683 EELT----------------------EYQKQIEEQYLANVEKDLERWQNARN-------- 742

Query: 423 QIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSN 482
                                  RK NND+SNLQETMDKELDTHRLEHGPK+  IP GSN
Sbjct: 743 -----------------------RKANNDMSNLQETMDKELDTHRLEHGPKRTKIPSGSN 768

Query: 483 NEDEDDVEDINVGEDDMIDDVLGVEDNGRRGEETAKPE-ADVVSPKADNT 529
           NE+EDDVEDINVGEDDM+DDVL V+DN RR +ET + + AD  SP A+ T
Sbjct: 803 NEEEDDVEDINVGEDDMMDDVLDVDDNSRRDDETTRADMADNASPNAEKT 768

[Close]

BLAST of Lsi05G002030 vs. TrEMBL
Match: A0A0D2NG33_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G001300 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 3.0e-100
Identity = 248/470 (52.77%), Postives = 294/470 (62.55%), Query Frame = 1


Query: 63  QITERLRDPRGLRRGGFPGPGPRNFAANGPR-RGFVRPGERNDAEDQPPAKRRLSSAVVK 122
           +ITERLRDPRGLRRGG  G GPRNFAANG R RGF+RP +R D EDQPPAKRRLSSAVVK
Sbjct: 26  EITERLRDPRGLRRGGLSGIGPRNFAANGSRQRGFLRPADRIDGEDQPPAKRRLSSAVVK 85

Query: 123 VSLRTQMEEDGEINEEAEGKDAMKDTSREETSGSDTAFQNDVKQNHLRQSGSFRLDGNKR 182
           V       EDGEI ++   KDA    S     GS    ++D K +  +QSG  R D N+ 
Sbjct: 86  V-------EDGEIVDDEVAKDA----SDMAVEGSGAVHESDRKLSTQQQSGWSRRDVNQT 145

Query: 183 AARMDFEVPAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGTEAFMRR 242
             + D EVP AE+VPRILPK+EDPSL++RNKRMLGQLLGTLE+FRKEDKQLSGTEA+MRR
Sbjct: 146 PLKKDAEVPVAEHVPRILPKDEDPSLINRNKRMLGQLLGTLERFRKEDKQLSGTEAYMRR 205

Query: 243 SDSLQRAEQRAREESERLRQQEREQIVEKRKRDLVCNSMLRARVAAKAEEKKLELLFLRW 302
           S+SLQRAEQRAREESE+LRQQEREQI EKR+RDL     LRARVAAKAEEKKLELLFL+W
Sbjct: 206 SNSLQRAEQRAREESEKLRQQEREQIAEKRRRDLT----LRARVAAKAEEKKLELLFLQW 265

Query: 303 SEHHKKLCNFIRSGCNSPLSFEGTFSRSLYFPGQRLNLQFIICQTNHWTRMQPWLSSEET 362
           SEHHKKL NFIR+    P+          Y P + L+    I +         W ++   
Sbjct: 266 SEHHKKLSNFIRTKTEPPI---------YYLPTKPLHEDAAIYEQQKEQEYLEWKTARRE 325

Query: 363 RLVPSLIFSLKRQFCLEIFCKSTALAFESLILFEYSASKLAFME-WKASRREELSEYQKQ 422
            L                        ++  I  EY  +    +E W+ +R+   +     
Sbjct: 326 EL----------------------SEYQKQIGEEYVGNVEKELERWQNARKARKANNDMN 385

Query: 423 IGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNN 482
           + E     ++K+L+                            HRLEHGPKKR IPGG+NN
Sbjct: 386 LQE----TMDKELDS---------------------------HRLEHGPKKRKIPGGNNN 418

Query: 483 EDEDDVEDINVGEDDMIDDVLGVED-NGRRGEETAKPEADVVSPKADNTV 530
           EDE+DVEDINVGEDDM+DDVLGV+D NGRRG+ETAK E D  SP  DN V
Sbjct: 446 EDEEDVEDINVGEDDMMDDVLGVDDNNGRRGDETAKAEPDNTSPVPDNNV 418

[Close]

BLAST of Lsi05G002030 vs. TAIR10
Match: AT1G15200.3 (AT1G15200.3 protein-protein interaction regulator family protein)

HSP 1 Score: 357.5 bits (916), Expect = 1.5e-98
Identity = 235/457 (51.42%), Postives = 295/457 (64.55%), Query Frame = 1


Query: 63  QITERLRDPRGLRRGGFPGPGPRNFAANGPRRGFVRPGERNDAEDQPPAKRRLSSAVVKV 122
           +ITERLRDPRGLRRGGF    PRN      RRGF RP ERND ED+PPAKRRLSSAVVKV
Sbjct: 26  EITERLRDPRGLRRGGFSNVAPRNQG----RRGFPRPAERNDVEDEPPAKRRLSSAVVKV 85

Query: 123 SLRTQMEEDGEINEEAEGKDAMKDTSREETSGSDTAFQNDVKQNHLRQSGSFRLDGNKRA 182
                + +DGE   +  G       ++ +   + T+ Q+D KQ+ L +    + D  +R 
Sbjct: 86  D-GEDVSKDGEFPVDGNG-------TQVKVGENGTSDQSDKKQSGLHRGSWSQRDAEQRR 145

Query: 183 ARMDFEVPAA-ENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGTEAFMRR 242
               +E  A  E  PR+LPKNEDP LV+RN+RMLG LLGTLEKFRKEDKQ SGT+A+ RR
Sbjct: 146 TNKRYEAFALPEPAPRVLPKNEDPKLVNRNRRMLGNLLGTLEKFRKEDKQRSGTDAYARR 205

Query: 243 SDSLQRAEQRAREESERLRQQEREQIVEKRKRDLVCNSMLRARVAAKAEEKKLELLFLRW 302
           + +LQRAE++AREESERLR QERE + EKR+RDL     LRARVAAKAE+KKLELLFL+W
Sbjct: 206 TAALQRAEEKAREESERLRLQERENLTEKRRRDLT----LRARVAAKAEQKKLELLFLQW 265

Query: 303 SEHHKKLCNFIRSGCNSPLSFEGTFSRSLYFPGQRLNL-QFIICQTNHWTRMQPWLSSEE 362
           SEH KKL NFI     +   F        YF  + +++  FI  +            S  
Sbjct: 266 SEHQKKLSNFISDEIANCYVFH--LQVIFYFGPKSVHIDNFIEAKI-----------SFH 325

Query: 363 TRLVPSLIFSLKRQFCLEIFCKSTALAFESLILFEYSASKLAFMEWKASRREELSEYQKQ 422
           +R     ++  + +    I+        E     E    +  F+EWKA+RR+E+SEYQK+
Sbjct: 326 SRAYKGNVWCYRTKAEPRIYYAPVKPLEEDTSEVEQQKER-TFLEWKAARRQEVSEYQKE 385

Query: 423 IGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGG--S 482
           I EQ + NVEK+LERWQNAR+ARK NN+  NLQETMDKEL+THR+EHGPKKR IPGG   
Sbjct: 386 IEEQCLGNVEKELERWQNARKARKANNEGMNLQETMDKELETHRMEHGPKKRKIPGGGVG 445

Query: 483 NNEDEDDVEDINVGEDDMI-DDVLGVEDNGRRGEETA 515
           + ++ED+VEDIN GED+MI DD+L    +G   EE A
Sbjct: 446 DEDEEDEVEDINGGEDEMIMDDLLEEGGDGTIKEEVA 452

[Close]

BLAST of Lsi05G002030 vs. NCBI nr
Match: gi|659112199|ref|XP_008456110.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496147 [Cucumis melo])

HSP 1 Score: 642.9 bits (1657), Expect = 5.0e-181
Identity = 367/474 (77.43%), Postives = 388/474 (81.86%), Query Frame = 1


Query: 63  QITERLRDPRGLRRGGFPGPGPRNFAANGPRRGFVRPGERNDAEDQPPAKRRLSSAVVKV 122
           +ITERLRDPRGLRRGGFPGPGPRNFAANGPRRGFVRPGERNDAEDQPPAKRRLSSAVVK 
Sbjct: 28  EITERLRDPRGLRRGGFPGPGPRNFAANGPRRGFVRPGERNDAEDQPPAKRRLSSAVVK- 87

Query: 123 SLRTQMEEDGEINEEAEGKDAMKDTSREETSGSDTAFQNDVKQNHLRQSGSFRLDGNKRA 182
                M EDGEINEEAEGKDAMKDTSREETSGSD  FQND +QNHLRQSGSFRLDGNKRA
Sbjct: 88  -----MAEDGEINEEAEGKDAMKDTSREETSGSDAVFQNDARQNHLRQSGSFRLDGNKRA 147

Query: 183 ARMDFEVPAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGTEAFMRRS 242
            RMD ++PAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGTEAFMRRS
Sbjct: 148 -RMDIDIPAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGTEAFMRRS 207

Query: 243 DSLQRAEQRAREESERLRQQEREQIVEKRKRDLVCNSMLRARVAAKAEEKKLELLFLRWS 302
           DSLQRAEQRAREESERLRQQEREQI EKRKRDL    MLRARVAAKAEEKKLELLFLRWS
Sbjct: 208 DSLQRAEQRAREESERLRQQEREQIAEKRKRDL----MLRARVAAKAEEKKLELLFLRWS 267

Query: 303 EHHKKLCNFIRSGCNSPLSFEGTFSRSLYFPGQRLNLQFII------CQTNHWTRMQPWL 362
           EHHKKLCNFIRS  +  L+F   F + ++  G ++++   I      C   +        
Sbjct: 268 EHHKKLCNFIRSAID--LTF--LFMQVIFNFGPKVSISHFIETKISFCSXIYXGYFFMKF 327

Query: 363 SSEETRLVPSLIFSLKRQFCLEIFCKSTALAFESLILFEYSASKLAFMEWKASRREELSE 422
               T+  PS+ +   +               E   L E    + AFMEWKASRREELSE
Sbjct: 328 VFSRTKTEPSIYYLPNKPLD------------EDATLAEQQRDE-AFMEWKASRREELSE 387

Query: 423 YQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPG 482
           YQKQIGEQYIANVEKDLERWQNARRARKG+NDVSNLQETMDKELDTHRLEHGPKKR IPG
Sbjct: 388 YQKQIGEQYIANVEKDLERWQNARRARKGSNDVSNLQETMDKELDTHRLEHGPKKRTIPG 447

Query: 483 GSNNEDEDDVEDINVGEDDMIDDVLGVEDNGRRGEETAKPEADVVSPKADNTVQ 531
           GSNNEDEDDVEDINVGEDDMIDDVL VEDNGRRGEETAKPEADV SPKAD+TVQ
Sbjct: 448 GSNNEDEDDVEDINVGEDDMIDDVLDVEDNGRRGEETAKPEADVASPKADDTVQ 473

[Close]

BLAST of Lsi05G002030 vs. NCBI nr
Match: gi|449445862|ref|XP_004140691.1| (PREDICTED: pinin [Cucumis sativus])

HSP 1 Score: 554.7 bits (1428), Expect = 1.8e-154
Identity = 325/469 (69.30%), Postives = 347/469 (73.99%), Query Frame = 1


Query: 63  QITERLRDPRGLRRGGFPGPGPRNFAANGPRRGFVRPGERNDAEDQPPAKRRLSSAVVKV 122
           +ITERLRDPRGLRRGGFPGPGPRNFAANGPRRGFVRPGERNDAEDQPPAKRRLSSAVVK 
Sbjct: 28  EITERLRDPRGLRRGGFPGPGPRNFAANGPRRGFVRPGERNDAEDQPPAKRRLSSAVVK- 87

Query: 123 SLRTQMEEDGEINEEAEGKDAMKDTSREETSGSDTAFQNDVKQNHLRQSGSFRLDGNKRA 182
                M EDGEINEEAEGKDA+KDTSREETSGSD  FQND +QNHLRQSGSFRLDGNKRA
Sbjct: 88  -----MAEDGEINEEAEGKDAVKDTSREETSGSDAVFQNDARQNHLRQSGSFRLDGNKRA 147

Query: 183 ARMDFEVPAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGTEAFMRRS 242
            RMD ++PAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGTEAFMRRS
Sbjct: 148 -RMDIDIPAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGTEAFMRRS 207

Query: 243 DSLQRAEQRAREESERLRQQEREQIVEKRKRDLVCNSMLRARVAAKAEEKKLELLFLRWS 302
           DSLQRAEQRAREESERLRQQEREQI EKRKRDL    MLRARVAAKAEEKKLELLFLRWS
Sbjct: 208 DSLQRAEQRAREESERLRQQEREQIAEKRKRDL----MLRARVAAKAEEKKLELLFLRWS 267

Query: 303 EHHKKLCNFIRSGCNSPLSFEGTFSRSLYFPGQRLNLQFIICQTNHWTRMQPWLSSEETR 362
           EHHKKLCNFIR+     +          Y P + L+    + +         W +S    
Sbjct: 268 EHHKKLCNFIRTKTEPSI---------YYLPNKPLDEDATLAEQQRDEAFMEWKASRREE 327

Query: 363 LVPSLIFSLKRQFCLEIFCKSTALAFESLILFEYSASKLAFME-WKASRREELSEYQKQI 422
           L                        ++  I  +Y A+    +E W+ +RR          
Sbjct: 328 L----------------------SEYQKQIGEQYIANVEKDLERWQNARRA--------- 387

Query: 423 GEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNE 482
                                RKG+NDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNE
Sbjct: 388 ---------------------RKGSNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNE 424

Query: 483 DEDDVEDINVGEDDMIDDVLGVEDNGRRGEETAKPEADVVSPKADNTVQ 531
           DEDDVEDINVGEDDMIDDVL VE+NGRRGEETAKPEADV SPKAD+TVQ
Sbjct: 448 DEDDVEDINVGEDDMIDDVLDVEENGRRGEETAKPEADVASPKADDTVQ 424

[Close]

BLAST of Lsi05G002030 vs. NCBI nr
Match: gi|645223836|ref|XP_008218824.1| (PREDICTED: LOW QUALITY PROTEIN: trichohyalin [Prunus mume])

HSP 1 Score: 465.3 bits (1196), Expect = 1.4e-127
Identity = 293/471 (62.21%), Postives = 331/471 (70.28%), Query Frame = 1


Query: 63  QITERLRDPRGLRRGGFPGPGPRNFAANGPR-RGFVRPGERNDAEDQPPAKRRLSSAVVK 122
           +ITERLRDPRGLR+GG    GPRNFAANG R RGF RP +R D EDQPPAKRRLSSAVVK
Sbjct: 26  EITERLRDPRGLRKGGLAAAGPRNFAANGARPRGFTRPADRPD-EDQPPAKRRLSSAVVK 85

Query: 123 VSLRTQMEEDGEINEEAE-GKDAMKDTSREETSGSDTAFQNDVKQNHLRQSGSFRLDGNK 182
           V       EDGEI E AE  KD  K+ + EE      A Q+D K ++ +QSG  R DGN 
Sbjct: 86  V-------EDGEITEIAEEAKDGKKNDTNEEAK----ADQSDRKLSNSQQSGWSRRDGNH 145

Query: 183 RAARMDFEVPAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGTEAFMR 242
            AA+ DFE+PA ++VPR+LPK +DPSLV+RNKRMLGQLLGTLEKFRKED QLSGTEAFMR
Sbjct: 146 GAAKKDFEIPAPDHVPRVLPKEQDPSLVNRNKRMLGQLLGTLEKFRKEDMQLSGTEAFMR 205

Query: 243 RSDSLQRAEQRAREESERLRQQEREQIVEKRKRDLVCNSMLRARVAAKAEEKKLELLFLR 302
           RS+SLQRAEQRAREESERLRQQEREQI EKR+RDL     LRARV AK EEK+LELLFL+
Sbjct: 206 RSNSLQRAEQRAREESERLRQQEREQIAEKRRRDLT----LRARVNAKTEEKRLELLFLQ 265

Query: 303 WSEHHKKLCNFIRSGCNSPLSFEGTFSRSLYF---PGQRLNLQFIICQTNHWTRMQPW-L 362
           WSEH+KKLCNFIR       S    F   + F   P       FI  + + ++    W +
Sbjct: 266 WSEHNKKLCNFIRIXILIXFSHYFIFLLQVIFNFGPKSVHIXHFIGTKISFYSCEYDWYV 325

Query: 363 SSEETRLVPSLIFSLKRQFCLEIFCKSTALAFESLILFEYSASKLAFMEWKASRREELSE 422
               T+  P + +  K+               E   L E    K  F+EWKA+RREEL+E
Sbjct: 326 FFFRTKAEPPIYYLPKKPLD------------EDPTLAEQRKEK-EFLEWKAARREELTE 385

Query: 423 YQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPG 482
           YQKQIGEQ IAN EK+LERWQNAR+ RK NNDV NLQETMDKELDTHRLEHGPKKR IP 
Sbjct: 386 YQKQIGEQCIANAEKELERWQNARKPRKANNDVMNLQETMDKELDTHRLEHGPKKRKIPD 445

Query: 483 GSNN-EDEDDVEDINVGEDDMIDDVLGVEDNGRRGEETAKPEADVVSPKAD 527
           GSNN EDEDDVEDINV ED MIDDVL V+DN RR +E  KPEA   SP AD
Sbjct: 446 GSNNDEDEDDVEDINVAEDYMIDDVLDVDDNSRRIDEIVKPEAGNTSPNAD 467

[Close]

BLAST of Lsi05G002030 vs. NCBI nr
Match: gi|976916253|gb|KVI01778.1| (Pinin/SDK/MemA protein, partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 454.9 bits (1169), Expect = 1.9e-124
Identity = 276/464 (59.48%), Postives = 333/464 (71.77%), Query Frame = 1


Query: 62  FQITERLRDPRGLRRGGFPGPGPRNFAANGP--RRGFVRPGERNDAEDQPPAKRRLSSAV 121
           ++ITERLRDPRG+RRGG  G GPRNF+A+GP  +RGFVRP ERN++EDQP  KRRLSS V
Sbjct: 63  WEITERLRDPRGIRRGGLTGSGPRNFSASGPARQRGFVRPAERNESEDQPAPKRRLSSTV 122

Query: 122 VKVSLRTQMEEDGEINEEA----EGKDAMKDTSREETSGSDTAFQNDVKQNHLRQSGSFR 181
           VK+       E+GEI E+A    +G D+ KD++ E T        N   QN+ + S   R
Sbjct: 123 VKI-------EEGEIVEDAVDASKGDDSNKDSAMEVTGWGG----NGENQNNRKPSNWAR 182

Query: 182 LDGNKRAARMDFEVPAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGT 241
            DG  R ++MD EVP +ENVPR+LPK+EDPSLV+RN+RMLGQLLGTLEKFRKED +LSG+
Sbjct: 183 RDGIHRLSKMDSEVPPSENVPRVLPKDEDPSLVNRNRRMLGQLLGTLEKFRKEDVKLSGS 242

Query: 242 EAFMRRSDSLQRAEQRAREESERLRQQEREQIVEKRKRDLVCNSMLRARVAAKAEEKKLE 301
           EAFMRRSDSL+RAEQRAREESERLRQQEREQI EKR+RDL     LRARVAAKAEEKKLE
Sbjct: 243 EAFMRRSDSLKRAEQRAREESERLRQQEREQIAEKRRRDLT----LRARVAAKAEEKKLE 302

Query: 302 LLFLRWSEHHKKLCNFIRSGCNSPLSFEGTFSRSLYFPGQRLNLQFIICQTNHWTRMQPW 361
           LLFLRWSEH KKL NF+R+    P+ +  +F++ L      L       +       +  
Sbjct: 303 LLFLRWSEHQKKLGNFLRTKAEPPIYY--SFAKQLEEDSTVLEQ-----RKEQGLNFEGK 362

Query: 362 LSSEETRLVPSLIFSLKRQFCLEIFCKSTALAFESLILFEYSASKLAFMEWKASRREELS 421
              EE+R         K   C++   +   +    ++       + AF EWKA+RREELS
Sbjct: 363 CWKEESR--------GKIGTCVDENRRKKVVGRRKVV------GEEAFQEWKAARREELS 422

Query: 422 EYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIP 481
           +YQ+QIGEQY+ANVEK+LERWQN R+AR GNND  NLQETMDKEL+THRLEHGPK R IP
Sbjct: 423 KYQQQIGEQYVANVEKELERWQNGRKARNGNNDTLNLQETMDKELETHRLEHGPKTRKIP 482

Query: 482 GGSNNEDEDDVEDINVGEDDMIDDVLGVEDNG-RRGEETAKPEA 519
           GG NNEDEDDVED+NVGEDDM+DDVL V+D+G RR EET KP+A
Sbjct: 483 GGDNNEDEDDVEDMNVGEDDMMDDVLDVDDSGNRRAEETVKPDA 490

[Close]

BLAST of Lsi05G002030 vs. NCBI nr
Match: gi|802556284|ref|XP_012065649.1| (PREDICTED: LOW QUALITY PROTEIN: pinin [Jatropha curcas])

HSP 1 Score: 446.0 bits (1146), Expect = 8.9e-122
Identity = 280/476 (58.82%), Postives = 330/476 (69.33%), Query Frame = 1


Query: 63  QITERLRDPRGLRRGGFP--GPGPRNFAANGPR-RGFVRPGERNDAEDQPPAKRRLSSAV 122
           QITERLRDPRGLRRGG    G GPRNFA NG R RGFVRP +R+  +DQPPAKRRL SAV
Sbjct: 27  QITERLRDPRGLRRGGLAAGGGGPRNFAGNGVRQRGFVRPADRDHTDDQPPAKRRLLSAV 86

Query: 123 VKVSLRTQMEEDGEINEEAE---GKDAMKDTSREETSGSDTAFQN-DVKQNHLRQSGSFR 182
           VKV       EDGEI E+ E     +  K ++ EE  G+    Q+ D K ++L+Q G  R
Sbjct: 87  VKV-------EDGEIVEDTEVATDLNKKKQSAEEENVGAGIDNQSADGKLSNLQQIGWSR 146

Query: 183 LDGNKRAARMDFEVPAAENVPRILPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGT 242
            DGN+R  + + E+P  E +PR+LPKNEDPSLVSRNKRMLGQLLGTLEKFRKED +LSGT
Sbjct: 147 RDGNQRLGKRETELPVVEPLPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDMKLSGT 206

Query: 243 EAFMRRSDSLQRAEQRAREESERLRQQEREQIVEKRKRDLVCNSMLRARVAAKAEEKKLE 302
           EAF +RS +LQRAEQRAREESERLRQQEREQI EKR+RDL     LRAR+AAK EEKKLE
Sbjct: 207 EAFKQRSSALQRAEQRAREESERLRQQEREQIAEKRRRDLT----LRARIAAKTEEKKLE 266

Query: 303 LLFLRWSEHHKKLCNFIRSGCNSPLSFEGTFSRSLYFPGQRLNL-QFIICQTNHWTRMQP 362
           LLF RWSEHHKKL NFI     +  +          F  + +++  FI  + +  +    
Sbjct: 267 LLFRRWSEHHKKLTNFISWQFINDFNTHVLLQVIFNFGPKXVHIHSFIETKISFCSCAYF 326

Query: 363 WLSSEETRLVPSLIFSLKRQFCLEIFCKSTALAFESLILFEYSASKLAFMEWKASRREEL 422
           W +   T+  P + +   +               E   L E    ++ F EWK +RREEL
Sbjct: 327 WDTFCRTKAEPPIYYLPNKPL------------DEDATLREQQKEQI-FAEWKTTRREEL 386

Query: 423 SEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNI 482
           SEYQKQI EQY+ NVEK+LERWQNAR+AR+ NND +NLQETMDKELDTHRLEHGPK R I
Sbjct: 387 SEYQKQIAEQYLGNVEKELERWQNARKARRPNND-ANLQETMDKELDTHRLEHGPKTRKI 446

Query: 483 PGGSNNEDEDDVEDINVGEDDMIDDVLGVEDNGRRGEETAKPEADVVSPKADNTVQ 531
           PGG NNEDEDDVEDINV EDDM+DDVL V++NGRRG+E AKPEAD  SP  +N  Q
Sbjct: 447 PGG-NNEDEDDVEDINVAEDDMMDDVLEVDENGRRGDEAAKPEADSTSPNPENLDQ 476

The following BLAST results are available for this feature:

BLAST of Lsi05G002030 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G002030 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L734_CUCSA	1.2e-154	69.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G209450 PE=4 SV=1	[more]
A0A103Y3D0_CYNCS	1.3e-124	59.48	Pinin/SDK/MemA protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_01...	[more]
A0A0B2QYS9_GLYSO	2.1e-114	57.23	Pinin OS=Glycine soja GN=glysoja_011292 PE=4 SV=1	[more]
W9SBD9_9ROSA	3.1e-105	53.19	Putative WRKY transcription factor 9 OS=Morus notabilis GN=L484_024154 PE=4 SV=1	[more]
A0A0D2NG33_GOSRA	3.0e-100	52.77	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G001300 PE=4 SV=1	[more]

BLAST of Lsi05G002030 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G15200.3	1.5e-98	51.42	protein-protein interaction regulator family protein	[more]

BLAST of Lsi05G002030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112199\|ref\|XP_008456110.1\|	5.0e-181	77.43	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496147 [Cucumis me...	[more]
gi\|449445862\|ref\|XP_004140691.1\|	1.8e-154	69.30	PREDICTED: pinin [Cucumis sativus]	[more]
gi\|645223836\|ref\|XP_008218824.1\|	1.4e-127	62.21	PREDICTED: LOW QUALITY PROTEIN: trichohyalin [Prunus mume]	[more]
gi\|976916253\|gb\|KVI01778.1\|	1.9e-124	59.48	Pinin/SDK/MemA protein, partial [Cynara cardunculus var. scolymus]	[more]
gi\|802556284\|ref\|XP_012065649.1\|	8.9e-122	58.82	PREDICTED: LOW QUALITY PROTEIN: pinin [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006786	Pinin_SDK_MemA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G002030.1	Lsi05G002030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006786	Pinin/SDK/MemA protein	PFAM	PF04696	Pinin_SDK_memA	coord: 208..316 score: 3.8
None	No IPR available	unknown	Coil	Coil	coord: 242..273 score: -coord: 5..28 scor
None	No IPR available	PANTHER	PTHR12707	PINN	coord: 63..316 score: 8.4E-111coord: 378..527 score: 8.4E
None	No IPR available	PANTHER	PTHR12707:SF0	PININ	coord: 63..316 score: 8.4E-111coord: 378..527 score: 8.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G002030	Csa3G209450	Cucumber (Chinese Long) v2	culsiB211
Lsi05G002030	CSPI03G18640	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G002030	Cucsa.244230	Cucumber (Gy14) v1	cgylsiB404
Lsi05G002030	CmaCh16G003640	Cucurbita maxima (Rimu)	cmalsiB316
Lsi05G002030	CmoCh16G003890	Cucurbita moschata (Rifu)	cmolsiB304
Lsi05G002030	CmoCh04G005400	Cucurbita moschata (Rifu)	cmolsiB683
Lsi05G002030	Cla013057	Watermelon (97103) v1	lsiwmB361
Lsi05G002030	MELO3C019500	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G002030	ClCG05G009900	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G002030	MELO3C019500.2	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G002030	Cla97C05G092310	Watermelon (97103) v2	lsiwmbB329
Lsi05G002030	Bhi01G001246	Wax gourd	lsiwgoB431
Lsi05G002030	Cp4.1LG14g04120	Cucurbita pepo (Zucchini)	cpelsiB177
Lsi05G002030	CsGy3G018480	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G002030	Carg11292	Silver-seed gourd	carlsiB595
Lsi05G002030	CsaV3_3G018690	Cucumber (Chinese Long) v3	cuclsiB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G002030	Cucurbita maxima (Rimu)	cmalsiB690
Lsi05G002030	Cucurbita pepo (Zucchini)	cpelsiB369
Lsi05G002030	Silver-seed gourd	carlsiB346