Lsi05G001900 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G001900
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Patatin
Location	chr05 : 2670058 .. 2672170 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTAATTTGAAAGTATCCCCTTCAGAAGTCTTGGGATTATACTGGAATGTATTTGTGGGGTTGCTACTGGTGACGTGGAGGTTTATGTCTTGTTCTTGCAATGGCTGATGAACCCTCAAGAGGGTTTCTATTTATCCCTTTTCCATTTTTACATTTTCATCCTTACTGAAAAATTTATCTCACGACTATCTGTGATCTTTTTCTTATGTTCTTTGGTATTGAAGTGTTTGAATTGATTTAGGAAACGACTCCGTTAGCTGGAGCCTCAGCTGGTGCGATTGTCTGTGCTGTTATTGCCTCTGGAGCCAGTATGGAGGAGGCTTTACAAGCTACTAAACTACTGGCCGAAGACTGCAGAAGTAGAGGGACTGCATTTCGCCTTGGGGTATTTCTCTGTTGAAGTAGACCATTTCATTCATTCTGTTTATTTTTTGTTTTTATTCCTGTTATTCTTTGTTATCCTTAAGTCTTAAGATTTATGATGCACATCAGCACATGTAGGTTCGTTCGCATCCCTGGATTTTCTAAATTCTAGACAATGGTGTAGGATGGTTGAGGAGTAATATTGTAGGTCTCTCTTGTCTTGACACTCAAGTTGTAGAGTGTTCGGACCATATCTTTTTGTAAATTTATCCTCTTGCTTTGGGATCATGGTGAGAGGGGAGATTTGCTTTTCCTTTGTTGTGTGGGTGTGTGTTTGTTTAAAACTCATCTACTGGTTCAATTTTTAATGTTTTCCTCATTTAAATCCTCAGGCTGTACTGAGGGAAGTTCTTGACAAGTTTCTGCCAGATGATGTACATATTAGGTGTAATGGGAGGGTCCGTGGTATGCATTCCTGTTCATTCTCTTTGGTCCCTAAACAAAATCACGATAAGAAACGGGAAAACTTTATATTATTATGACATTACTCGATTACTGCAATCTGAGTTCATTGTAATTGGTTTGCACAATGTGATGGGAGAGCATTTCACACTTGTAATGCAATTCCATTTTGGAAACTTTGATTTCTCATTTATACTTCTCTGTTGTGTTCCAGTTGCTGTTACCCAAGTTTTTTGGAGGCCTAGAGGCTTGTTGGTGGATCAGTTTGATTCAAAAGATGATCTCATCGATGCAGTTTTCACTTCTTCCTTTATTCCTGGGTGACTATTTAAATTTCATATCCTCTTGAATGTTCAAACATTTCCTAGTTTGGTAAATGACCTTGGGCTGAAACAATGCTTTAGTGTAGATACCTAGCCCCAAGACCTGCCACAGTCTTTCGGAATAGACTATGCATTGACGGCGGTCTAACATTGTTCATGCCGCCAACTTCTGCCTCTCAGACGGTATTATTTACTTGATAAATTTCTCAATGATTTTCCCAAAAGTTTCATTAATCTGATTCATTAGAGACAAGATTCAAAATGTATTTCAGTCACCCTGGAATTTTGCTTCGGACTCTGTTGCAGGTGCGTGTATGTGCGTTCCCAGCTAGCAGACTGGGATTTGAAGGGATTGGGATCAGTCCTGACTGCAACCCTGAAAACAGAGCTGGCCCCAGAGAGGTAAATGAGATCAACAAACCTCGTCCAACGAGTAGACACATTGTCACTTCTTTTATGTTATGACAGCAAATTGATCAAACTCTTACTTGTTCCGCATCATTTCAGCTTTTCAACTGGGCTCTTGAGCCAGCAGAAGATGACATTCTAGATCAGCTCTTTGACTTGGGATATCAGGATGCAGCTGTTTGGGCTAATGATAATCCTGTTGAAAAGCTGGTGGAAGACGAAAGGCACGACTGAGAACGACGCTTGTAACTAGTTGACGCATCAAGTGAAGATGGTGAATAAAAATCGGACATGCTTGGTGGTAAGTACATGCCATTAACTCAAAACTTTCTGGATTGCTTGCTGATGATCATACTTCCTCAACTGCTTAGATACACACCGGAATCCCTTATAACAAAAGCAGACAAAGCTTCAATTCATGAATGAAAGGATAAAATTAATATTATACAGGTAGATATAAAAGTCTTGAGTTTAAGATAACCAAGACTATAGGTATCAGTGTGTTTATATATATATATATATATATATATGTTTTCCCTTCCCCTCACCTCCAC

mRNA sequence

ATGTGTAATTTGAAAGTATCCCCTTCAGAAGTCTTGGGATTATACTGGAATGTATTTGTGGGGTTGCTACTGGAAACGACTCCGTTAGCTGGAGCCTCAGCTGGTGCGATTGTCTGTGCTGTTATTGCCTCTGGAGCCAGTATGGAGGAGGCTTTACAAGCTACTAAACTACTGGCCGAAGACTGCAGAAGTAGAGGGACTGCATTTCGCCTTGGGGCTGTACTGAGGGAAGTTCTTGACAAGTTTCTGCCAGATGATGTACATATTAGGTGTAATGGGAGGGTCCGTGTTGCTGTTACCCAAGTTTTTTGGAGGCCTAGAGGCTTGTTGGTGGATCAGTTTGATTCAAAAGATGATCTCATCGATGCAGTTTTCACTTCTTCCTTTATTCCTGGATACCTAGCCCCAAGACCTGCCACAGTCTTTCGGAATAGACTATGCATTGACGGCGGTCTAACATTGTTCATGCCGCCAACTTCTGCCTCTCAGACGGTGCGTGTATGTGCGTTCCCAGCTAGCAGACTGGGATTTGAAGGGATTGGGATCAGTCCTGACTGCAACCCTGAAAACAGAGCTGGCCCCAGAGAGCTTTTCAACTGGGCTCTTGAGCCAGCAGAAGATGACATTCTAGATCAGCTCTTTGACTTGGGATATCAGGATGCAGCTGTTTGGGCTAATGATAATCCTGTTGAAAAGCTGGTGGAAGACGAAAGGCACGACTGAGAACGACGCTTGTAACTAGTTGACGCATCAAGTGAAGATGGTGAATAAAAATCGGACATGCTTGGTGGTAAGTACATGCCATTAACTCAAAACTTTCTGGATTGCTTGCTGATGATCATACTTCCTCAACTGCTTAGATACACACCGGAATCCCTTATAACAAAAGCAGACAAAGCTTCAATTCATGAATGAAAGGATAAAATTAATATTATACAGGTAGATATAAAAGTCTTGAGTTTAAGATAACCAAGACTATAGGTATCAGTGTGTTTATATATATATATATATATATATATGTTTTCCCTTCCCCTCACCTCCAC

Coding sequence (CDS)

ATGTGTAATTTGAAAGTATCCCCTTCAGAAGTCTTGGGATTATACTGGAATGTATTTGTGGGGTTGCTACTGGAAACGACTCCGTTAGCTGGAGCCTCAGCTGGTGCGATTGTCTGTGCTGTTATTGCCTCTGGAGCCAGTATGGAGGAGGCTTTACAAGCTACTAAACTACTGGCCGAAGACTGCAGAAGTAGAGGGACTGCATTTCGCCTTGGGGCTGTACTGAGGGAAGTTCTTGACAAGTTTCTGCCAGATGATGTACATATTAGGTGTAATGGGAGGGTCCGTGTTGCTGTTACCCAAGTTTTTTGGAGGCCTAGAGGCTTGTTGGTGGATCAGTTTGATTCAAAAGATGATCTCATCGATGCAGTTTTCACTTCTTCCTTTATTCCTGGATACCTAGCCCCAAGACCTGCCACAGTCTTTCGGAATAGACTATGCATTGACGGCGGTCTAACATTGTTCATGCCGCCAACTTCTGCCTCTCAGACGGTGCGTGTATGTGCGTTCCCAGCTAGCAGACTGGGATTTGAAGGGATTGGGATCAGTCCTGACTGCAACCCTGAAAACAGAGCTGGCCCCAGAGAGCTTTTCAACTGGGCTCTTGAGCCAGCAGAAGATGACATTCTAGATCAGCTCTTTGACTTGGGATATCAGGATGCAGCTGTTTGGGCTAATGATAATCCTGTTGAAAAGCTGGTGGAAGACGAAAGGCACGACTGA

Protein sequence

MCNLKVSPSEVLGLYWNVFVGLLLETTPLAGASAGAIVCAVIASGASMEEALQATKLLAEDCRSRGTAFRLGAVLREVLDKFLPDDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRPATVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDDILDQLFDLGYQDAAVWANDNPVEKLVEDERHD

Homology

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BLAST of Lsi05G001900 vs. Swiss-Prot
Match: PLPL3_HUMAN (Patatin-like phospholipase domain-containing protein 3 OS=Homo sapiens GN=PNPLA3 PE=1 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 1.9e-15
Identity = 56/154 (36.36%), Postives = 82/154 (53.25%), Query Frame = 1


Query: 22  LLLETTPLAGASAGAIVCAVIASGASMEEALQATKLLAEDCRSRGT-----AFRLGAVLR 81
           LL +   L GASAGA+ C  + SG  +E+ LQ    L    RSR       +F L   LR
Sbjct: 36  LLRDARMLFGASAGALHCVGVLSGIPLEQTLQVLSDLVRKARSRNIGIFHPSFNLSKFLR 95

Query: 82  EVLDKFLPDDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAP 141
           + L K LP +VH   +G++ +++T+V      +LV  F SKD+++DA+  S FIP Y   
Sbjct: 96  QGLCKCLPANVHQLISGKIGISLTRVS-DGENVLVSDFRSKDEVVDALVCSCFIPFYSGL 155

Query: 142 RPATVFRNRLCIDGGLTLFMPPTSASQTVRVCAF 171
            P + FR    +DGG++  +P   A  T+ V  F
Sbjct: 156 IPPS-FRGVRYVDGGVSDNVPFIDAKTTITVSPF 187

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BLAST of Lsi05G001900 vs. Swiss-Prot
Match: PLPL2_MOUSE (Patatin-like phospholipase domain-containing protein 2 OS=Mus musculus GN=Pnpla2 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.1e-13
Identity = 66/220 (30.00%), Postives = 100/220 (45.45%), Query Frame = 1


Query: 22  LLLETTPLAGASAGAIVCAVIASGASMEEALQATKLLAEDCRSR-----GTAFRLGAVLR 81
           L+   T + GASAGA+    + +GA + EA      ++++ R R       +F L   +R
Sbjct: 36  LVANATHIYGASAGALTATALVTGACLGEAGANIIEVSKEARKRFLGPLHPSFNLVKTIR 95

Query: 82  EVLDKFLPDDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAP 141
             L K LP D H R NGR+ +++T+V      +++  F SKD+LI A   S+FIP Y   
Sbjct: 96  GCLLKTLPADCHERANGRLGISLTRVS-DGENVIISHFSSKDELIQANVCSTFIPVYCGL 155

Query: 142 RPATVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRE 201
            P T+   R  +DGG++  +P      T+ V  F          G S  C  ++     E
Sbjct: 156 IPPTLQGVRY-VDGGISDNLPLYELKNTITVSPFS---------GESDICPQDSSTNIHE 215

Query: 202 L--------FNW--------ALEPAEDDILDQLFDLGYQD 221
           L        FN         AL P E  +L ++   GY+D
Sbjct: 216 LRVTNTSIQFNLRNLYRLSKALFPPEPMVLREMCKQGYRD 244

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BLAST of Lsi05G001900 vs. Swiss-Prot
Match: PLPL3_MOUSE (Patatin-like phospholipase domain-containing protein 3 OS=Mus musculus GN=Pnpla3 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.1e-13
Identity = 59/222 (26.58%), Postives = 101/222 (45.50%), Query Frame = 1


Query: 22  LLLETTPLAGASAGAIVCAVIASGASMEEALQATKLLAEDCRSRGTA-----FRLGAVLR 81
           LL +     G SAGA+          +   ++    L    RSR        F +   +R
Sbjct: 36  LLRDARTFFGCSAGALHAVTFVCSLPLGRIMEILMDLVRKARSRNIGTLHPFFNINKCIR 95

Query: 82  EVLDKFLPDDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAP 141
           + L + LPD+VH   +G+V +++T+V      +LV +F SKD+++DA+  S FIP +   
Sbjct: 96  DGLQESLPDNVHQVISGKVHISLTRVS-DGENVLVSEFHSKDEVVDALVCSCFIPLFSGL 155

Query: 142 RPATVFRNRLCIDGGLTLFMPPTSASQTVRVCAF--------PASRLGFEGIGISPDCNP 201
            P + FR    +DGG++  +P   A  T+ V  F              F  + I+ + + 
Sbjct: 156 IPPS-FRGERYVDGGVSDNVPVLDAKTTITVSPFYGEHDICPKVKSTNFFHVNIT-NLSL 215

Query: 202 ENRAGPRELFNWALEPAEDDILDQLFDLGYQDAAVWANDNPV 231
               G  +L   AL P++  ++ +L   GY DA  +  +N +
Sbjct: 216 RLCTGNLQLLTRALFPSDVKVMGELCYQGYLDAFRFLEENGI 254

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BLAST of Lsi05G001900 vs. Swiss-Prot
Match: PLPL2_RAT (Patatin-like phospholipase domain-containing protein 2 OS=Rattus norvegicus GN=Pnpla2 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.9e-13
Identity = 65/220 (29.55%), Postives = 100/220 (45.45%), Query Frame = 1


Query: 22  LLLETTPLAGASAGAIVCAVIASGASMEEALQATKLLAEDCRSR-----GTAFRLGAVLR 81
           L+   T + GASAGA+    + +GA + EA      ++++ R R       +F L   +R
Sbjct: 36  LVANATHIYGASAGALTATALVTGACLGEAGANIIEVSKEARKRFLGPLHPSFNLVKTIR 95

Query: 82  EVLDKFLPDDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAP 141
             L K LP D H R +GR+ +++T+V      +++  F SKD+LI A   S+FIP Y   
Sbjct: 96  GCLLKTLPADCHTRASGRLGISLTRVS-DGENVIISHFSSKDELIQANVCSTFIPVYCGL 155

Query: 142 RPATVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRE 201
            P T+   R  +DGG++  +P      T+ V  F          G S  C  ++     E
Sbjct: 156 IPPTLQGVRY-VDGGISDNLPLYELKNTITVSPFS---------GESDICPQDSSTNIHE 215

Query: 202 L--------FNW--------ALEPAEDDILDQLFDLGYQD 221
           L        FN         AL P E  +L ++   GY+D
Sbjct: 216 LRITNTSIQFNLRNLYRLSKALFPPEPMVLREMCKQGYRD 244

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BLAST of Lsi05G001900 vs. Swiss-Prot
Match: PLPL1_HUMAN (Patatin-like phospholipase domain-containing protein 1 OS=Homo sapiens GN=PNPLA1 PE=1 SV=3)

HSP 1 Score: 72.4 bits (176), Expect = 7.6e-12
Identity = 59/219 (26.94%), Postives = 102/219 (46.58%), Query Frame = 1


Query: 23  LLETTP-LAGASAGAIVCAVIASGASMEEALQATKLLAEDCRSR-----GTAFRLGAVLR 82
           +LET    AG SAGA++ A+   G  M+E L+   +   + +         + ++  ++R
Sbjct: 42  MLETAHRFAGTSAGAVIAALAICGIEMDEYLRVLNVGVAEVKKSFLGPLSPSCKMVQMMR 101

Query: 83  EVLDKFLPDDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAP 142
           + L + LP+D +    G++ V++T++      ++V +F SK++LI+A++ S F+P Y   
Sbjct: 102 QFLYRVLPEDSYKVTTGKLHVSLTRLT-DGENVVVSEFTSKEELIEALYCSCFVPVYCGL 161

Query: 143 RPATVFRNRLCIDGGLTLFMPPTSASQTVRVCAF-----------PASRLGFEGIGISPD 202
            P T +R    IDGG T   P    +  + +  F           PA    F     S  
Sbjct: 162 IPPT-YRGVRYIDGGFTGMQPCAFWTDAITISTFSGQQDICPRDCPAIFHDFRMFNCSFQ 221

Query: 203 CNPENRAGPRELFNWALEPAEDDILDQLFDLGYQDAAVW 225
            + EN A        AL P +  IL   +  GY+DA ++
Sbjct: 222 FSLENIA----RMTHALFPPDLVILHDYYYRGYEDAVLY 254

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BLAST of Lsi05G001900 vs. TrEMBL
Match: A0A0A0L746_CUCSA (Patatin OS=Cucumis sativus GN=Csa_3G214570 PE=3 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 8.4e-119
Identity = 210/216 (97.22%), Postives = 213/216 (98.61%), Query Frame = 1


Query: 25  ETTPLAGASAGAIVCAVIASGASMEEALQATKLLAEDCRSRGTAFRLGAVLREVLDKFLP 84
           ETTPLAGASAGAIVCAVIASGASM+EALQATK+LAEDCRSRGTAFRLGAVLREVLDKFLP
Sbjct: 172 ETTPLAGASAGAIVCAVIASGASMQEALQATKILAEDCRSRGTAFRLGAVLREVLDKFLP 231

Query: 85  DDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRPATVFRN 144
           DDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRP TVFRN
Sbjct: 232 DDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRPVTVFRN 291

Query: 145 RLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNWALEP 204
           RLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNWALEP
Sbjct: 292 RLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNWALEP 351

Query: 205 AEDDILDQLFDLGYQDAAVWANDNPVEKLVEDERHD 241
           AEDDILDQLF+LGYQDAAVW  DNPVEKLVEDERHD
Sbjct: 352 AEDDILDQLFELGYQDAAVWGEDNPVEKLVEDERHD 387

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BLAST of Lsi05G001900 vs. TrEMBL
Match: M5XXP9_PRUPE (Patatin OS=Prunus persica GN=PRUPE_ppa006651mg PE=3 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 9.7e-107
Identity = 187/217 (86.18%), Postives = 206/217 (94.93%), Query Frame = 1


Query: 21  GLLLETTPLAGASAGAIVCAVIASGASMEEALQATKLLAEDCRSRGTAFRLGAVLREVLD 80
           G + ETTPLAG+SAGAIVCAVIASGASMEEALQATK+LAEDCR+RGTAFRLGAVLR+VL 
Sbjct: 175 GYIKETTPLAGSSAGAIVCAVIASGASMEEALQATKILAEDCRNRGTAFRLGAVLRDVLQ 234

Query: 81  KFLPDDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRPAT 140
           KFLPDD HIR NGRVRVAVTQ+ WRPRGLLVDQFDSK+DLIDAVFTSSFIPGYLAPRPAT
Sbjct: 235 KFLPDDAHIRSNGRVRVAVTQLLWRPRGLLVDQFDSKEDLIDAVFTSSFIPGYLAPRPAT 294

Query: 141 VFRNRLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNW 200
           +FRNRLCIDGGLTLFMPPTSA+QTVRVCAFPASRLG +GIGISPDCNP++RA PR+LFNW
Sbjct: 295 MFRNRLCIDGGLTLFMPPTSAAQTVRVCAFPASRLGLQGIGISPDCNPDDRATPRQLFNW 354

Query: 201 ALEPAEDDILDQLFDLGYQDAAVWANDNPVEKLVEDE 238
           ALEP EDD+LD+LF+LGYQDAAVWA DNPV ++VED+
Sbjct: 355 ALEPGEDDVLDRLFELGYQDAAVWAKDNPVGEIVEDD 391

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BLAST of Lsi05G001900 vs. TrEMBL
Match: B9SRI9_RICCO (Patatin OS=Ricinus communis GN=RCOM_1411270 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.2e-106
Identity = 186/217 (85.71%), Postives = 205/217 (94.47%), Query Frame = 1


Query: 21  GLLLETTPLAGASAGAIVCAVIASGASMEEALQATKLLAEDCRSRGTAFRLGAVLREVLD 80
           G + ETTPLAG+SAGAIVCAVIASGASM EAL+ATK+LAEDCR RGTAFRLGAVLR+VL+
Sbjct: 180 GYIKETTPLAGSSAGAIVCAVIASGASMHEALEATKVLAEDCRLRGTAFRLGAVLRDVLE 239

Query: 81  KFLPDDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRPAT 140
           KFLPDD HIR NGRVRVAVTQ+ WRPRGLLVDQFDSK+DLI+AVFTSSFIPGYLAPRPAT
Sbjct: 240 KFLPDDAHIRSNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPAT 299

Query: 141 VFRNRLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNW 200
           +FRNRLCIDGGLTLFMPPTSA+QT+RVCAFPASRLG +GIGISPDCNPENRA PRELFNW
Sbjct: 300 MFRNRLCIDGGLTLFMPPTSAAQTIRVCAFPASRLGLQGIGISPDCNPENRASPRELFNW 359

Query: 201 ALEPAEDDILDQLFDLGYQDAAVWANDNPVEKLVEDE 238
           ALEPAEDDILD+LF LGY DAAVWA +NPV+K+V+D+
Sbjct: 360 ALEPAEDDILDRLFQLGYSDAAVWAEENPVDKVVQDD 396

[Close]

BLAST of Lsi05G001900 vs. TrEMBL
Match: A0A0S3S1S5_PHAAN (Patatin OS=Vigna angularis var. angularis GN=Vigan.05G010400 PE=3 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.4e-105
Identity = 186/217 (85.71%), Postives = 204/217 (94.01%), Query Frame = 1


Query: 21  GLLLETTPLAGASAGAIVCAVIASGASMEEALQATKLLAEDCRSRGTAFRLGAVLREVLD 80
           G + ETTPLAG+SAGAIVCAVIASGASMEEAL ATK+LAEDCR+RGTAFRLGAVLR++LD
Sbjct: 165 GYIKETTPLAGSSAGAIVCAVIASGASMEEALTATKILAEDCRNRGTAFRLGAVLRDILD 224

Query: 81  KFLPDDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRPAT 140
           KFLPDDVHIR NGRVRVAVTQ+ WRPRGLLVDQFDSK+DLI+AVFTSSFIPGYLAPRPAT
Sbjct: 225 KFLPDDVHIRSNGRVRVAVTQLLWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPAT 284

Query: 141 VFRNRLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNW 200
           VFRNRLCIDGGLTLFMPPTSA+QTVRVCAFPASRLG EGIGISPDCNPEN   PR+LFNW
Sbjct: 285 VFRNRLCIDGGLTLFMPPTSAAQTVRVCAFPASRLGLEGIGISPDCNPENACSPRQLFNW 344

Query: 201 ALEPAEDDILDQLFDLGYQDAAVWANDNPVEKLVEDE 238
           ALEPAED +LD+LF+LGY DAAVWA +NPVE +V+D+
Sbjct: 345 ALEPAEDAVLDRLFELGYLDAAVWAKENPVEAVVQDD 381

[Close]

BLAST of Lsi05G001900 vs. TrEMBL
Match: A0A0L9VG75_PHAAN (Patatin OS=Phaseolus angularis GN=LR48_Vigan09g270400 PE=3 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.4e-105
Identity = 186/217 (85.71%), Postives = 204/217 (94.01%), Query Frame = 1


Query: 21  GLLLETTPLAGASAGAIVCAVIASGASMEEALQATKLLAEDCRSRGTAFRLGAVLREVLD 80
           G + ETTPLAG+SAGAIVCAVIASGASMEEAL ATK+LAEDCR+RGTAFRLGAVLR++LD
Sbjct: 165 GYIKETTPLAGSSAGAIVCAVIASGASMEEALTATKILAEDCRNRGTAFRLGAVLRDILD 224

Query: 81  KFLPDDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRPAT 140
           KFLPDDVHIR NGRVRVAVTQ+ WRPRGLLVDQFDSK+DLI+AVFTSSFIPGYLAPRPAT
Sbjct: 225 KFLPDDVHIRSNGRVRVAVTQLLWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPAT 284

Query: 141 VFRNRLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNW 200
           VFRNRLCIDGGLTLFMPPTSA+QTVRVCAFPASRLG EGIGISPDCNPEN   PR+LFNW
Sbjct: 285 VFRNRLCIDGGLTLFMPPTSAAQTVRVCAFPASRLGLEGIGISPDCNPENACSPRQLFNW 344

Query: 201 ALEPAEDDILDQLFDLGYQDAAVWANDNPVEKLVEDE 238
           ALEPAED +LD+LF+LGY DAAVWA +NPVE +V+D+
Sbjct: 345 ALEPAEDAVLDRLFELGYLDAAVWAKENPVEAVVQDD 381

[Close]

BLAST of Lsi05G001900 vs. TAIR10
Match: AT1G33270.1 (AT1G33270.1 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein)

HSP 1 Score: 347.1 bits (889), Expect = 9.0e-96
Identity = 165/217 (76.04%), Postives = 188/217 (86.64%), Query Frame = 1


Query: 21  GLLLETTPLAGASAGAIVCAVIASGASMEEALQATKLLAEDCRSRGTAFRLGAVLREVLD 80
           G + ETTPLAG+SAGAIVCAVI SGA+M EAL+ATK LA DCR  GTAFRLGAVLRE ++
Sbjct: 143 GYIKETTPLAGSSAGAIVCAVITSGATMREALEATKELAYDCRRNGTAFRLGAVLRESME 202

Query: 81  KFLPDDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRPAT 140
           + LPDD+HIR NGR+RVA+TQVFWRPRGLLVDQFDSK DLIDAVFTSSFIPGYLAPRPAT
Sbjct: 203 RLLPDDIHIRSNGRIRVAITQVFWRPRGLLVDQFDSKSDLIDAVFTSSFIPGYLAPRPAT 262

Query: 141 VFRNRLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNW 200
           +FRNRLC+DGGLTLFMPPT+A++TVRVCAF AS    +GI I PDCNP NRA  R+L NW
Sbjct: 263 MFRNRLCVDGGLTLFMPPTAAAKTVRVCAFSASNFKLKGIEICPDCNPLNRATSRQLLNW 322

Query: 201 ALEPAEDDILDQLFDLGYQDAAVWANDNPVEKLVEDE 238
           ALEPAED++L++LF+LGY DAA WA  NPVE LV D+
Sbjct: 323 ALEPAEDEVLERLFELGYADAATWAEMNPVEGLVYDD 359

[Close]

BLAST of Lsi05G001900 vs. NCBI nr
Match: gi|449464490|ref|XP_004149962.1| (PREDICTED: patatin-like phospholipase domain-containing protein 2 [Cucumis sativus])

HSP 1 Score: 434.5 bits (1116), Expect = 1.2e-118
Identity = 210/216 (97.22%), Postives = 213/216 (98.61%), Query Frame = 1


Query: 25  ETTPLAGASAGAIVCAVIASGASMEEALQATKLLAEDCRSRGTAFRLGAVLREVLDKFLP 84
           ETTPLAGASAGAIVCAVIASGASM+EALQATK+LAEDCRSRGTAFRLGAVLREVLDKFLP
Sbjct: 172 ETTPLAGASAGAIVCAVIASGASMQEALQATKILAEDCRSRGTAFRLGAVLREVLDKFLP 231

Query: 85  DDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRPATVFRN 144
           DDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRP TVFRN
Sbjct: 232 DDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRPVTVFRN 291

Query: 145 RLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNWALEP 204
           RLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNWALEP
Sbjct: 292 RLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNWALEP 351

Query: 205 AEDDILDQLFDLGYQDAAVWANDNPVEKLVEDERHD 241
           AEDDILDQLF+LGYQDAAVW  DNPVEKLVEDERHD
Sbjct: 352 AEDDILDQLFELGYQDAAVWGEDNPVEKLVEDERHD 387

[Close]

BLAST of Lsi05G001900 vs. NCBI nr
Match: gi|659112152|ref|XP_008456089.1| (PREDICTED: uncharacterized protein LOC103496128 [Cucumis melo])

HSP 1 Score: 431.4 bits (1108), Expect = 1.0e-117
Identity = 208/216 (96.30%), Postives = 213/216 (98.61%), Query Frame = 1


Query: 25  ETTPLAGASAGAIVCAVIASGASMEEALQATKLLAEDCRSRGTAFRLGAVLREVLDKFLP 84
           ETTPLAGASAGAIVCAVIASGASM+EALQATKLLAEDCRSRGTAFRLGAVLREVLDKFLP
Sbjct: 175 ETTPLAGASAGAIVCAVIASGASMQEALQATKLLAEDCRSRGTAFRLGAVLREVLDKFLP 234

Query: 85  DDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRPATVFRN 144
           DDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRP TVFRN
Sbjct: 235 DDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRPVTVFRN 294

Query: 145 RLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNWALEP 204
           RLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNWALEP
Sbjct: 295 RLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNWALEP 354

Query: 205 AEDDILDQLFDLGYQDAAVWANDNPVEKLVEDERHD 241
           AEDDILD+LF+LGY+DAAVW  DNPVEKLVEDE+HD
Sbjct: 355 AEDDILDKLFELGYEDAAVWGEDNPVEKLVEDEKHD 390

[Close]

BLAST of Lsi05G001900 vs. NCBI nr
Match: gi|645305802|ref|XP_008245976.1| (PREDICTED: uncharacterized protein C05D11.7-like [Prunus mume])

HSP 1 Score: 394.4 bits (1012), Expect = 1.4e-106
Identity = 187/217 (86.18%), Postives = 206/217 (94.93%), Query Frame = 1


Query: 21  GLLLETTPLAGASAGAIVCAVIASGASMEEALQATKLLAEDCRSRGTAFRLGAVLREVLD 80
           G + ETTPLAG+SAGAIVCAVIASGASMEEALQATK+LAEDCR+RGTAFRLGAVLR+VL 
Sbjct: 194 GYIKETTPLAGSSAGAIVCAVIASGASMEEALQATKILAEDCRNRGTAFRLGAVLRDVLQ 253

Query: 81  KFLPDDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRPAT 140
           KFLPDD HIR NGRVRVAVTQ+ WRPRGLLVDQFDSK+DLIDAVFTSSFIPGYLAPRPAT
Sbjct: 254 KFLPDDAHIRSNGRVRVAVTQLLWRPRGLLVDQFDSKEDLIDAVFTSSFIPGYLAPRPAT 313

Query: 141 VFRNRLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNW 200
           +FRNRLCIDGGLTLFMPPTSA+QTVRVCAFPASRLG +GIGISPDCNP++RA PR+LFNW
Sbjct: 314 MFRNRLCIDGGLTLFMPPTSAAQTVRVCAFPASRLGLQGIGISPDCNPDDRATPRQLFNW 373

Query: 201 ALEPAEDDILDQLFDLGYQDAAVWANDNPVEKLVEDE 238
           ALEP EDD+LD+LF+LGYQDAAVWA DNPV ++VED+
Sbjct: 374 ALEPGEDDVLDRLFELGYQDAAVWAKDNPVGEIVEDD 410

[Close]

BLAST of Lsi05G001900 vs. NCBI nr
Match: gi|596153536|ref|XP_007222791.1| (hypothetical protein PRUPE_ppa006651mg [Prunus persica])

HSP 1 Score: 394.4 bits (1012), Expect = 1.4e-106
Identity = 187/217 (86.18%), Postives = 206/217 (94.93%), Query Frame = 1


Query: 21  GLLLETTPLAGASAGAIVCAVIASGASMEEALQATKLLAEDCRSRGTAFRLGAVLREVLD 80
           G + ETTPLAG+SAGAIVCAVIASGASMEEALQATK+LAEDCR+RGTAFRLGAVLR+VL 
Sbjct: 175 GYIKETTPLAGSSAGAIVCAVIASGASMEEALQATKILAEDCRNRGTAFRLGAVLRDVLQ 234

Query: 81  KFLPDDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRPAT 140
           KFLPDD HIR NGRVRVAVTQ+ WRPRGLLVDQFDSK+DLIDAVFTSSFIPGYLAPRPAT
Sbjct: 235 KFLPDDAHIRSNGRVRVAVTQLLWRPRGLLVDQFDSKEDLIDAVFTSSFIPGYLAPRPAT 294

Query: 141 VFRNRLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNW 200
           +FRNRLCIDGGLTLFMPPTSA+QTVRVCAFPASRLG +GIGISPDCNP++RA PR+LFNW
Sbjct: 295 MFRNRLCIDGGLTLFMPPTSAAQTVRVCAFPASRLGLQGIGISPDCNPDDRATPRQLFNW 354

Query: 201 ALEPAEDDILDQLFDLGYQDAAVWANDNPVEKLVEDE 238
           ALEP EDD+LD+LF+LGYQDAAVWA DNPV ++VED+
Sbjct: 355 ALEPGEDDVLDRLFELGYQDAAVWAKDNPVGEIVEDD 391

[Close]

BLAST of Lsi05G001900 vs. NCBI nr
Match: gi|223531953|gb|EEF33766.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 393.3 bits (1009), Expect = 3.1e-106
Identity = 186/217 (85.71%), Postives = 205/217 (94.47%), Query Frame = 1


Query: 21  GLLLETTPLAGASAGAIVCAVIASGASMEEALQATKLLAEDCRSRGTAFRLGAVLREVLD 80
           G + ETTPLAG+SAGAIVCAVIASGASM EAL+ATK+LAEDCR RGTAFRLGAVLR+VL+
Sbjct: 180 GYIKETTPLAGSSAGAIVCAVIASGASMHEALEATKVLAEDCRLRGTAFRLGAVLRDVLE 239

Query: 81  KFLPDDVHIRCNGRVRVAVTQVFWRPRGLLVDQFDSKDDLIDAVFTSSFIPGYLAPRPAT 140
           KFLPDD HIR NGRVRVAVTQ+ WRPRGLLVDQFDSK+DLI+AVFTSSFIPGYLAPRPAT
Sbjct: 240 KFLPDDAHIRSNGRVRVAVTQILWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPAT 299

Query: 141 VFRNRLCIDGGLTLFMPPTSASQTVRVCAFPASRLGFEGIGISPDCNPENRAGPRELFNW 200
           +FRNRLCIDGGLTLFMPPTSA+QT+RVCAFPASRLG +GIGISPDCNPENRA PRELFNW
Sbjct: 300 MFRNRLCIDGGLTLFMPPTSAAQTIRVCAFPASRLGLQGIGISPDCNPENRASPRELFNW 359

Query: 201 ALEPAEDDILDQLFDLGYQDAAVWANDNPVEKLVEDE 238
           ALEPAEDDILD+LF LGY DAAVWA +NPV+K+V+D+
Sbjct: 360 ALEPAEDDILDRLFQLGYSDAAVWAEENPVDKVVQDD 396

The following BLAST results are available for this feature:

BLAST of Lsi05G001900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLPL3_HUMAN	1.9e-15	36.36	Patatin-like phospholipase domain-containing protein 3 OS=Homo sapiens GN=PNPLA3...	[more]
PLPL2_MOUSE	3.1e-13	30.00	Patatin-like phospholipase domain-containing protein 2 OS=Mus musculus GN=Pnpla2...	[more]
PLPL3_MOUSE	3.1e-13	26.58	Patatin-like phospholipase domain-containing protein 3 OS=Mus musculus GN=Pnpla3...	[more]
PLPL2_RAT	6.9e-13	29.55	Patatin-like phospholipase domain-containing protein 2 OS=Rattus norvegicus GN=P...	[more]
PLPL1_HUMAN	7.6e-12	26.94	Patatin-like phospholipase domain-containing protein 1 OS=Homo sapiens GN=PNPLA1...	[more]

BLAST of Lsi05G001900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L746_CUCSA	8.4e-119	97.22	Patatin OS=Cucumis sativus GN=Csa_3G214570 PE=3 SV=1	[more]
M5XXP9_PRUPE	9.7e-107	86.18	Patatin OS=Prunus persica GN=PRUPE_ppa006651mg PE=3 SV=1	[more]
B9SRI9_RICCO	2.2e-106	85.71	Patatin OS=Ricinus communis GN=RCOM_1411270 PE=3 SV=1	[more]
A0A0S3S1S5_PHAAN	1.4e-105	85.71	Patatin OS=Vigna angularis var. angularis GN=Vigan.05G010400 PE=3 SV=1	[more]
A0A0L9VG75_PHAAN	1.4e-105	85.71	Patatin OS=Phaseolus angularis GN=LR48_Vigan09g270400 PE=3 SV=1	[more]

BLAST of Lsi05G001900 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G33270.1	9.0e-96	76.04	Acyl transferase/acyl hydrolase/lysophospholipase superfamily protei...	[more]

BLAST of Lsi05G001900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464490\|ref\|XP_004149962.1\|	1.2e-118	97.22	PREDICTED: patatin-like phospholipase domain-containing protein 2 [Cucumis sativ...	[more]
gi\|659112152\|ref\|XP_008456089.1\|	1.0e-117	96.30	PREDICTED: uncharacterized protein LOC103496128 [Cucumis melo]	[more]
gi\|645305802\|ref\|XP_008245976.1\|	1.4e-106	86.18	PREDICTED: uncharacterized protein C05D11.7-like [Prunus mume]	[more]
gi\|596153536\|ref\|XP_007222791.1\|	1.4e-106	86.18	hypothetical protein PRUPE_ppa006651mg [Prunus persica]	[more]
gi\|223531953\|gb\|EEF33766.1\|	3.1e-106	85.71	conserved hypothetical protein [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process
GO:0006629	lipid metabolic process
GO:0016042	lipid catabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR016035	Acyl_Trfase/lysoPLipase
IPR002641	PNPLA_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016042	lipid catabolic process
biological_process	GO:0006629	lipid metabolic process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G001900.1	Lsi05G001900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002641	Patatin/Phospholipase A2-related	PFAM	PF01734	Patatin	coord: 29..154 score: 6.
IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase	unknown	SSF52151	FabD/lysophospholipase-like	coord: 27..216 score: 1.18
None	No IPR available	PANTHER	PTHR12406:SF7	BRUMMER, ISOFORM B-RELATED	coord: 22..237 score: 9.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G001900	Carg26430	Silver-seed gourd	carlsiB057

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G001900	Cucumber (Gy14) v1	cgylsiB003
Lsi05G001900	Cucumber (Gy14) v1	cgylsiB029
Lsi05G001900	Cucurbita maxima (Rimu)	cmalsiB316
Lsi05G001900	Cucurbita maxima (Rimu)	cmalsiB690
Lsi05G001900	Cucurbita moschata (Rifu)	cmolsiB304
Lsi05G001900	Cucurbita moschata (Rifu)	cmolsiB683
Lsi05G001900	Cucurbita pepo (Zucchini)	cpelsiB177
Lsi05G001900	Cucurbita pepo (Zucchini)	cpelsiB369
Lsi05G001900	Wild cucumber (PI 183967)	cpilsiB202
Lsi05G001900	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G001900	Cucumber (Chinese Long) v2	culsiB202
Lsi05G001900	Cucumber (Chinese Long) v2	culsiB211
Lsi05G001900	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G001900	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G001900	Watermelon (97103) v1	lsiwmB361
Lsi05G001900	Cucumber (Gy14) v2	cgyblsiB189
Lsi05G001900	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G001900	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G001900	Silver-seed gourd	carlsiB595
Lsi05G001900	Cucumber (Chinese Long) v3	cuclsiB224
Lsi05G001900	Cucumber (Chinese Long) v3	cuclsiB230
Lsi05G001900	Watermelon (97103) v2	lsiwmbB329
Lsi05G001900	Wax gourd	lsiwgoB431