Carg26430 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCCAGTTGCTGTTACTCAAGTTTTTTGGAGGCCCAGAGGCTTGTTGGTGGATCAGTTTGATTCAAAAGATGATCTCATCAATGCAGTTTTCACTTCTTCCTTTATTCCAGGGTGGGTATTTTAGTTTCACATCCTCTTGAATGTTCTTACTTTTCCTAGTTGGGTAAATGACCCTGAGCTGAAATAACGCTTTTGTGTAGATACCTAGCGCCAAGACCCGTCACCGTCTTTCGGAATAGACTATGCATTGATGGTGGTCTAACATTGTTCATGCCACCTACTTCTGCCTCTCAAACGGTATTTACTTGATAAATTTCTCAATGGTTTTTCGTATTTCAGTCACCCTGAAATTTTGCTTTTGGACGGTGTCGCAGGTGCGTGTATGTGCTTTCCCCGCTACCCGATTGGGCTTTGAAGGGATTGGGATCAGTCCAGACTGCAACCCTGAAAACAGAGCTGGGCCAAGAGAGGTAAATGAGTTCGACAAAGCTCGTCCAACAAGTAGATACATTGTTGTTTTCTCTTTGTAGTTTGATCAAACTCTTGCATGTTCTGCATCATATCAGCTTTTCAACTGGGCTCTTGAACCAGCAGAAGATTACATTCTAGACCGTCTCTTTGACCTCGGATATCAAGATGCAGCTGTTTGGGCCAAGGATAATCCTGTTGAAAAGCTGGTGGAAGACGAAAGGCTCGGTTGAGGACGCGGTTGTAACTAGCTGAAGCATAAAATTATGATGGCGAATCAATCTAAATGGAAGATGTTGCAGGCTTGGTGGTAAGTGCATGCCTTAAACCCAAAACTTTTTGGATTGCTGCTGATACTTACTGCCTCAAAATGGTTAGATACACATATATGAATCCCTTTAACAGAATAGAACAAAAGCCTTCATTCATGAATGTGAAGATAAAAATAATTATACAGGTAGATATCAAAAGTCCTGAGTTTATGATGGCCAAGTACAACATTCTCAGGATTTACATGTGCATTTTGCTGCTATTTTACTACATTCTCAGTACAAGAACAACATTCTTGTATTTTGTTTTCTTCATACAGTACATATATACATACATATATATATATATATATATCATTTCTTTTTCTTTGAACATCTTTCCA ATGTCCCAGTTGCTGTTACTCAAGTTTTTTGGAGGCCCAGAGGCTTGTTGGTGGATCAGTTTGATTCAAAAGATGATCTCATCAATGCAGTTTTCACTTCTTCCTTTATTCCAGGGTGGATACCTAGCGCCAAGACCCGTCACCGTCTTTCGGAATAGACTATGCATTGATGGTGGTCTAACATTGTTCATGCCACCTACTTCTGCCTCTCAAACGGTGCGTGTATGTGCTTTCCCCGCTACCCGATTGGGCTTTGAAGGGATTGGGATCAGTCCAGACTGCAACCCTGAAAACAGAGCTGGGCCAAGAGAGCTTTTCAACTGGGCTCTTGAACCAGCAGAAGATTACATTCTAGACCGTCTCTTTGACCTCGGATATCAAGATGCAGCTGTTTGGGCCAAGGATAATCCTGTTGAAAAGCTGGTGGAAGACGAAAGGCTCGGTTGAGGACGCGGTTGTAACTAGCTGAAGCATAAAATTATGATGGCGAATCAATCTAAATGGAAGATGTTGCAGGCTTGGTGGTAAGTGCATGCCTTAAACCCAAAACTTTTTGGATTGCTGCTGATACTTACTGCCTCAAAATGGTTAGATACACATATATGAATCCCTTTAACAGAATAGAACAAAAGCCTTCATTCATGAATGTGAAGATAAAAATAATTATACAGGTAGATATCAAAAGTCCTGAGTTTATGATGGCCAAGTACAACATTCTCAGGATTTACATGTGCATTTTGCTGCTATTTTACTACATTCTCAGTACAAGAACAACATTCTTGTATTTTGTTTTCTTCATACAGTACATATATACATACATATATATATATATATATATCATTTCTTTTTCTTTGAACATCTTTCCA ATGTCCCAGTTGCTGTTACTCAAGTTTTTTGGAGGCCCAGAGGCTTGTTGGTGGATCAGTTTGATTCAAAAGATGATCTCATCAATGCAGTTTTCACTTCTTCCTTTATTCCAGGGTGGATACCTAGCGCCAAGACCCGTCACCGTCTTTCGGAATAGACTATGCATTGATGGTGGTCTAACATTGTTCATGCCACCTACTTCTGCCTCTCAAACGGTGCGTGTATGTGCTTTCCCCGCTACCCGATTGGGCTTTGAAGGGATTGGGATCAGTCCAGACTGCAACCCTGAAAACAGAGCTGGGCCAAGAGAGCTTTTCAACTGGGCTCTTGAACCAGCAGAAGATTACATTCTAGACCGTCTCTTTGACCTCGGATATCAAGATGCAGCTGTTTGGGCCAAGGATAATCCTGTTGAAAAGCTGGTGGAAGACGAAAGGCTCGGTTGA MSQLLLLKFFGGPEACWWISLIQKMISSMQFSLLPLFQGGYLAPRPVTVFRNRLCIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRELFNWALEPAEDYILDRLFDLGYQDAAVWAKDNPVEKLVEDERLG
BLAST of Carg26430 vs. NCBI nr
Match: XP_022943045.1 (patatin-like phospholipase domain-containing protein 2 [Cucurbita moschata]) HSP 1 Score: 236.9 bits (603), Expect = 4.4e-59 Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Carg26430 vs. NCBI nr
Match: XP_023513040.1 (patatin-like phospholipase domain-containing protein 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 235.0 bits (598), Expect = 1.7e-58 Identity = 109/112 (97.32%), Postives = 109/112 (97.32%), Query Frame = 0
BLAST of Carg26430 vs. NCBI nr
Match: XP_022981351.1 (patatin-like phospholipase domain-containing protein 4 [Cucurbita maxima]) HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57 Identity = 108/112 (96.43%), Postives = 108/112 (96.43%), Query Frame = 0
BLAST of Carg26430 vs. NCBI nr
Match: XP_022149306.1 (patatin-like phospholipase domain-containing protein 2 [Momordica charantia]) HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54 Identity = 101/109 (92.66%), Postives = 104/109 (95.41%), Query Frame = 0
BLAST of Carg26430 vs. NCBI nr
Match: XP_004149962.1 (PREDICTED: patatin-like phospholipase domain-containing protein 2 [Cucumis sativus] >KGN57568.1 hypothetical protein Csa_3G214570 [Cucumis sativus]) HSP 1 Score: 221.1 bits (562), Expect = 2.5e-54 Identity = 102/110 (92.73%), Postives = 106/110 (96.36%), Query Frame = 0
BLAST of Carg26430 vs. TAIR10
Match: AT1G33270.1 (Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein) HSP 1 Score: 168.3 bits (425), Expect = 3.5e-42 Identity = 76/109 (69.72%), Postives = 89/109 (81.65%), Query Frame = 0
BLAST of Carg26430 vs. TrEMBL
Match: tr|A0A0A0L746|A0A0A0L746_CUCSA (Patatin OS=Cucumis sativus OX=3659 GN=Csa_3G214570 PE=3 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.7e-54 Identity = 102/110 (92.73%), Postives = 106/110 (96.36%), Query Frame = 0
BLAST of Carg26430 vs. TrEMBL
Match: tr|A0A1S3C2I5|A0A1S3C2I5_CUCME (Patatin OS=Cucumis melo OX=3656 GN=LOC103496128 PE=3 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 6.3e-54 Identity = 100/110 (90.91%), Postives = 106/110 (96.36%), Query Frame = 0
BLAST of Carg26430 vs. TrEMBL
Match: tr|A0A2I4FV16|A0A2I4FV16_9ROSI (Patatin OS=Juglans regia OX=51240 GN=LOC109002274 PE=3 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.9e-51 Identity = 93/110 (84.55%), Postives = 104/110 (94.55%), Query Frame = 0
BLAST of Carg26430 vs. TrEMBL
Match: tr|W9RMD0|W9RMD0_9ROSA (Patatin OS=Morus notabilis OX=981085 GN=L484_024189 PE=3 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.5e-50 Identity = 94/108 (87.04%), Postives = 100/108 (92.59%), Query Frame = 0
BLAST of Carg26430 vs. TrEMBL
Match: tr|A0A2R6RDV3|A0A2R6RDV3_ACTCH (Patatin OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07889 PE=3 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.5e-50 Identity = 92/109 (84.40%), Postives = 102/109 (93.58%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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