Lsi05G001550 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G001550
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	COBRA-like protein 6
Location	chr05 : 2275670 .. 2279488 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAACCAGTTTATTTCAGTTTTCCAAAGAAACCCATGTTTCGATCAAAGGTTTATGGTCTTTATTTTGATCTTATTCTCTCTTACTTGCTCCTTCTCACCTTCCTGTAAGTATATTCCTCTCTCAATGTATGTGATATTTGTGTTCTGTTTTGTCTGAGGAAAGGGTTCTCTTGTGAGGGAATAGAAGAAATTTAATACAAAGGTTAGGTTGAAATGCAGATGGATATGACTCATTGGACCCTTATGCTAACATTACTATCACATGGGATTTCTTGGTAGAGAATGGGGATACTTATGATGTAAGTATAACTGTTATGCTTCTGATTTTACTGGTCAATTTTTAGTTTATCCCTGTTATCACTTATGATCTTGAATCAACTTAACACTATTTCTAAAAGATTCTTGTGTTAGAATACTTTATCTTAATATTTAGGGGCAATTGCAAATATAGCAATCAGACCCAAGTATTAGCAGATATAGCACAATGCAAAAGAATTTGCAGATATAGCAAAATTTAGATCAAACTCTTAGAGTCTATCAGTGATAGATTTTGCTATATTAGCAATTCTTTAAAAATGTTGCTATACACTTAATTATTAGCGCTAAAAGTGCTACCCATGACAATTACCCTAATATTTAAGTGTGAATCACATATTATTGATATATGATTGAGTGGACCTATGAAGTTTTATTTGGTATAGGTGACATGTTGAACTCTTAACTCTTATTGAGCTTAATGGAATTCGAAAAATAGTCTTTCCTGAAAACGATGTCGTTTTTTTTTTGCTCTAAGATAGTGTTGTTCCAAGTTAGATTTTTTCTTCGTATTTTTTATTCTAAAAATTCAATGTTCATGATTTTGGAGTCAAACTGAGCATAACTTAGTGATCATGACATCTCTACCTGTCTTAAAAGAATCAAAGGCTTAAGGGAGTGTTTGGGGCAAGGAATGGAGTTATAAAATTTGAGAAATTGTGAACTCCCGGAGCTCATAGTGTAAGGAGTTAATAAGACATAAAATTGTTATTTTTAGTTGTGGGGCCCATGAACTCCTTAGGCCAAACAAGGAGTGGAGTTCACAATTCCAACTTCCCAACTTCTTGGTCCAAACACCCCATGAATTCTCACCCACATGTGTGATGTAGTATTCTTTAAAAAAAATCATGAGTTTGAGATAGCAACTCTAGATAAAACATATAGCTTCCAGTTCTCACTTCTGAAATGCTAAAGTTTCTCATTTTTGGCATTTTCTAACATCTTGTAATTTTCAAAGTAACGCATATTCTAATAAGTGAAAGTGTTTGGCCATTTTGGCTTAAAAGAATTGCTTTTTTTTTTCCATTGACTCTTCTAATTCTTTTTGTCCTCATTTCTCCATGTCTTTGTTCCATCAACAAAATGCAGCAGCTTGTTTCAGTGGTCTCTCTTGTGAGTTTTGCTATATAGTAGTGTTGTGTCATAACAGTTCTATTGTATCACAGCAACAAACTCATCGAACTATCAAATCTTCTGGGAGCTCATCTAACTATACACATGAAGAGGATAGCAATGTCAACTTGCCACCTTTTTGTTCTAAATCAATTGATCATTATGTTAAACTTCACAGGTGAGGGTTTCATTGTACAATTTCCAACTGTTTCGCCATGTGGAGCTGCCTGGTTGGAAACTTGGATGGTCATGGAAAGGTGAGGAAGTTATATGGAGTATGTGGGGGGCAGAGGCTACTCAGCAAGGAAATTGCTCCAAATACATAGGCAGAGAGCTTCCTCATTGTTGTGAGAAGAAGCCTGTGATTGTTGATCTTATGCCTGGAGCTCCTTATAAGTTGCAGGTGGCCAATTGTTGTAAAGGAGGTGTGCTATCTTCGATGAGACAAGAGTCTGCCAACTATGGAGCTGCCTTCCAAATGAATGTCGGAAAGTCTTCTGGAAAGGGTGTAGATAGCAAAATGCCTGCAAATTTCACACTGGGGCTTCCTGGATATACGTGTAGTGAACCATTTCAAGTCTCTCCAACCAAGTTTAGTAAGGATGGCGGTCGCCGGTGGACACAAGTTCTAGGTAATTACTTGAGATAGGGACACAGAAATTTGTTCTTCTATGTCCTGTTTGATAAAAGATTATGACTTCTTTAGTTAAAATAAACTGTTTGGGATTTTAACAATGGGAAACTTCATAAACAAAATAGATTTGGAACTGACCCTATATCTTGGTAAGTTAAAGAAGTATGAACATAAAGGAAATTTGAGAAAATGGAGATTTTTTTCACCTTCCAGGTCACTTCTGATACCAACAGTAGATTGAGTTAAGTATGTAAATATCTCCGGCTTTTGCCAAAGTGAGTATTGCTCAGCAGTAACTGACATGAACTTCTCTTATGTTAAAATTATGATTGGAATTGGTATTTTTGTGTTAGTTTTATGAGATTCCTTTTGGCATTTAGAAAGTAGCAGCAGTGTTGTAGGTTAACCGAACTCCCTCTCTGGGATCTATACATTATTTCTGGATGTAGAAACATGGAACGTGACCTGTGTTTACTCCCAATTTCAATCATCACCGTCACCGAAGTGCTGCGTTTCATTGTCATCTTTCTACAACAGCACCATTGTCCCTTGCCCTCAATGCAGCTGTGGTTGCCAAGGGCTAAAGGGAACAAAATGTGTCAAGTAATCTTCCACACTTTGCCTCCCCTGCCATTTTCTATGCTTGGAATATAGTTATTCTTTGTATGACTAGTAAAATCTTCCACTGTCCAAAAATATTTTACAGGTCAGGTGAAACTCCTTCAGTGTTGCAACTTCCACATGAACATTACACTGCTGAAGTAGAACCGTTGGTGAGGTGTTCACAACACATGTGCCCAATAAGGGTGCATTGGCATGTGAAACAGAGTTATACACAGTATTGGAGGGTAAAGATAACAATCACAAATCTAAATTTTGCTAAGAATTACTCTGAATGGAACTTAGTAGTGATGCATCCCAATTTGCGGAACATTACTCAAGTTTTCAGCTTCAACTACAGCCCTCTCAATCAGTATGGTAACATCAGTAAGTTTCACCAGTGTCCATTGGATCTTATCTCTCACAATTTTCTTTTTATCAAAATTCATAGCATGTTTGGAAGTACTTTTGAACTCTTTAAAGGAAATTAACTTATGGATGGTGCCCTTCATAATTTTGGAAATTTCTACAAAACGCCCTTTTATATATTTGAAAGTCGCAACAAGCGTGTATCTCAAAAGTAAGTTCCATTCAGAGGTACTTTTGAATCTATCAAAAACATTTTTTTACTAATTAAACTAGCATTTCTTGTACTTTAAATGCTCTCTGAAACATGTCTTTTAAGGCCTCATTATTTATAATAGAGACTGATCCTTTTATGGAAAATAAAAATGCTGAGTAAACTCTTGTTGTGCTTCTCAAGATGACACAGGGATGTTTTGGGGGATACACTTCTACAATGACTTGTTACTCACATCAGGAGAGAGAGGGAATGTCCAAACAGAAATTCTTCTCCAAAAAGATTCAGAAATTTTCACTTTCAGAGAAGGATGGGCATTCCCAAGAAGAATTTTGTTCAATGGGGATGAATGTGTAATGCCACCTCCAGACCAATATCCAAGGCTCCCAAATAAAGCTCACAGGGCCATGGCAGCCTCATTCATAGTTTTCTTCTTCTTGTTTCTCTCTGTATCATTATAACAGGGGAATTCAGGAGATAGCAGTGCAATACACAAGTTACAAGCAGTAAGTAGTATAGCACAGTTTTTAGTTTTATTTGCTTATGGTTCTGATGATGAGAATATTAGTTGA

mRNA sequence

ATGGAGAACCAGTTTATTTCAGTTTTCCAAAGAAACCCATGTTTCGATCAAAGGTTTATGGTCTTTATTTTGATCTTATTCTCTCTTACTTGCTCCTTCTCACCTTCCTATGGATATGACTCATTGGACCCTTATGCTAACATTACTATCACATGGGATTTCTTGGTAGAGAATGGGGATACTTATGATGTGAGGGTTTCATTGTACAATTTCCAACTGTTTCGCCATGTGGAGCTGCCTGGTTGGAAACTTGGATGGTCATGGAAAGGTGAGGAAGTTATATGGAGTATGTGGGGGGCAGAGGCTACTCAGCAAGGAAATTGCTCCAAATACATAGGCAGAGAGCTTCCTCATTGTTGTGAGAAGAAGCCTGTGATTGTTGATCTTATGCCTGGAGCTCCTTATAAGTTGCAGGTGGCCAATTGTTGTAAAGGAGGTGTGCTATCTTCGATGAGACAAGAGTCTGCCAACTATGGAGCTGCCTTCCAAATGAATGTCGGAAAGTCTTCTGGAAAGGGTGTAGATAGCAAAATGCCTGCAAATTTCACACTGGGGCTTCCTGGATATACGTGTAGTGAACCATTTCAAGTCTCTCCAACCAAGTTTAGTAAGGATGGCGGTCGCCGGTGGACACAAGTTCTAGAAACATGGAACGTGACCTGTGTTTACTCCCAATTTCAATCATCACCGTCACCGAAGTGCTGCGTTTCATTGTCATCTTTCTACAACAGCACCATTGTCCCTTGCCCTCAATGCAGCTGTGGTTGCCAAGGGCTAAAGGGAACAAAATGTGTCAAGTCAGGTGAAACTCCTTCAGTGTTGCAACTTCCACATGAACATTACACTGCTGAAGTAGAACCGTTGGGGAATTCAGGAGATAGCAGTGCAATACACAAGTTACAAGCAGTAAGTAGTATAGCACAGTTTTTAGTTTTATTTGCTTATGGTTCTGATGATGAGAATATTAGTTGA

Coding sequence (CDS)

ATGGAGAACCAGTTTATTTCAGTTTTCCAAAGAAACCCATGTTTCGATCAAAGGTTTATGGTCTTTATTTTGATCTTATTCTCTCTTACTTGCTCCTTCTCACCTTCCTATGGATATGACTCATTGGACCCTTATGCTAACATTACTATCACATGGGATTTCTTGGTAGAGAATGGGGATACTTATGATGTGAGGGTTTCATTGTACAATTTCCAACTGTTTCGCCATGTGGAGCTGCCTGGTTGGAAACTTGGATGGTCATGGAAAGGTGAGGAAGTTATATGGAGTATGTGGGGGGCAGAGGCTACTCAGCAAGGAAATTGCTCCAAATACATAGGCAGAGAGCTTCCTCATTGTTGTGAGAAGAAGCCTGTGATTGTTGATCTTATGCCTGGAGCTCCTTATAAGTTGCAGGTGGCCAATTGTTGTAAAGGAGGTGTGCTATCTTCGATGAGACAAGAGTCTGCCAACTATGGAGCTGCCTTCCAAATGAATGTCGGAAAGTCTTCTGGAAAGGGTGTAGATAGCAAAATGCCTGCAAATTTCACACTGGGGCTTCCTGGATATACGTGTAGTGAACCATTTCAAGTCTCTCCAACCAAGTTTAGTAAGGATGGCGGTCGCCGGTGGACACAAGTTCTAGAAACATGGAACGTGACCTGTGTTTACTCCCAATTTCAATCATCACCGTCACCGAAGTGCTGCGTTTCATTGTCATCTTTCTACAACAGCACCATTGTCCCTTGCCCTCAATGCAGCTGTGGTTGCCAAGGGCTAAAGGGAACAAAATGTGTCAAGTCAGGTGAAACTCCTTCAGTGTTGCAACTTCCACATGAACATTACACTGCTGAAGTAGAACCGTTGGGGAATTCAGGAGATAGCAGTGCAATACACAAGTTACAAGCAGTAAGTAGTATAGCACAGTTTTTAGTTTTATTTGCTTATGGTTCTGATGATGAGAATATTAGTTGA

Protein sequence

MENQFISVFQRNPCFDQRFMVFILILFSLTCSFSPSYGYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWSMWGAEATQQGNCSKYIGRELPHCCEKKPVIVDLMPGAPYKLQVANCCKGGVLSSMRQESANYGAAFQMNVGKSSGKGVDSKMPANFTLGLPGYTCSEPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFQSSPSPKCCVSLSSFYNSTIVPCPQCSCGCQGLKGTKCVKSGETPSVLQLPHEHYTAEVEPLGNSGDSSAIHKLQAVSSIAQFLVLFAYGSDDENIS

Homology

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BLAST of Lsi05G001550 vs. Swiss-Prot
Match: COBL6_ARATH (COBRA-like protein 6 OS=Arabidopsis thaliana GN=COBL6 PE=2 SV=2)

HSP 1 Score: 300.8 bits (769), Expect = 1.8e-80
Identity = 142/257 (55.25%), Postives = 172/257 (66.93%), Query Frame = 1


Query: 38  GYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWSM 97
           GYD LDP+  I I WD L+ +   + V+V+L N Q +RHVE PGWKL W W  +EVIW M
Sbjct: 35  GYDPLDPFGKIIIKWDLLLSSPGQHHVQVTLENMQEYRHVEKPGWKLSWHWLNQEVIWDM 94

Query: 98  WGAEATQQGNCSKYIGR-ELPHCCEKKPVIVDLMPGAPYKLQVANCCKGGVLSSMRQESA 157
            GAE T+QGNCS +     LPHCC ++P IVDL+PGA   +QVANCC+GGVL+SM Q+ A
Sbjct: 95  KGAETTEQGNCSAFASSGNLPHCCLERPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHA 154

Query: 158 NYGAAFQMNVGKSSGKGVDSKMPANFTLGLPGYTCSEPFQVSPTKFSKDGGRRWTQVLET 217
           N+ +AF M VG S     +  MP+NF +G+PGY+C     VSPTKFS D GRR TQ L T
Sbjct: 155 NHVSAFHMTVGSSPDGPEEFNMPSNFDIGVPGYSCDNATSVSPTKFSTDKGRRKTQALAT 214

Query: 218 WNVTCVYSQFQSSPSPKCCVSLSSFYNSTIVPCPQCSCGCQGLKGTKCVKSGETPSVLQL 277
           W   CVYSQF+SSPSPKCCVSLS+FY   IVPCP CSCGC     + CVK GE P  L+ 
Sbjct: 215 WEAVCVYSQFRSSPSPKCCVSLSAFYYQNIVPCPTCSCGC---SSSHCVKDGELPPYLEQ 274

Query: 278 PHEHYTAEVEPLGNSGD 294
            H+    EV P+    D
Sbjct: 275 KHDP-DEEVSPVVKCSD 287

[Close]

BLAST of Lsi05G001550 vs. Swiss-Prot
Match: COBL1_ORYSJ (COBRA-like protein 1 OS=Oryza sativa subsp. japonica GN=BC1L6 PE=2 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.2e-75
Identity = 141/274 (51.46%), Postives = 176/274 (64.23%), Query Frame = 1


Query: 18  RFMVFILILFSLTCSFSPSY-GYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQLFRH 77
           R  V + +L +   S  PS   YD LDP  NITI WD L    D Y   VSLYN+Q +RH
Sbjct: 7   RMGVSVALLVAFFSSLIPSSEAYDPLDPNGNITIKWDVLQWTPDGYVAVVSLYNYQQYRH 66

Query: 78  VELPGWKLGWSWKGEEVIWSMWGAEATQQGNCSKYIGRELPHCCEKKPVIVDLMPGAPYK 137
           ++ PGWKLGW W  +E+IW+M G +AT+QG+CSK+    +PHCC+K P IVDL+PG PY 
Sbjct: 67  IQSPGWKLGWVWAKKEIIWAMNGGQATEQGDCSKFKSN-IPHCCKKDPEIVDLLPGTPYN 126

Query: 138 LQVANCCKGGVLSSMRQESANYGAAFQMNVGKSSGKGVDSKMPANFTLGLPG--YTCSEP 197
           +Q+ANCCKGGVL+S  Q+ AN  A+FQ++VG++       ++P NFTL  PG  YTC   
Sbjct: 127 MQIANCCKGGVLNSWAQDPANAIASFQVSVGQAGTTNKTVRVPRNFTLKSPGPGYTCGSA 186

Query: 198 FQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFQSSPSPKCCVSLSSFYNSTIVPCPQCSC 257
             V PTKF    GRR TQ   TWNVTC YSQ  +  SP CCVSLSSFYN TIV CP CSC
Sbjct: 187 KVVRPTKFFSQDGRRTTQAHMTWNVTCTYSQIVAQRSPTCCVSLSSFYNDTIVNCPTCSC 246

Query: 258 GCQGLKGTKCVKSGETPSVLQLPHEHYTAEVEPL 289
           GCQ  K   CV+ G +P +  + + H    + PL
Sbjct: 247 GCQNNKPGSCVE-GNSPYLASVVNTHNKDSLTPL 278

[Close]

BLAST of Lsi05G001550 vs. Swiss-Prot
Match: COBL2_ARATH (COBRA-like protein 2 OS=Arabidopsis thaliana GN=COBL2 PE=1 SV=2)

HSP 1 Score: 277.7 bits (709), Expect = 1.6e-73
Identity = 129/243 (53.09%), Postives = 167/243 (68.72%), Query Frame = 1


Query: 18  RFMVFILILFSLTC-SFSPSYGYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQLFRH 77
           RF   +L L S T  +F+ +  YD+LDPY NITI WD +   GD Y   V+++NFQ +RH
Sbjct: 7   RFSFLLLFLCSWTSFTFTTTEAYDALDPYGNITIKWDIMSWTGDGYVAVVTIFNFQQYRH 66

Query: 78  VELPGWKLGWSWKGEEVIWSMWGAEATQQGNCSKYIGRELPHCCEKKPVIVDLMPGAPYK 137
           +E PGW+LGWSW  +EVIWSM G +AT+QG+CSK+ G  +PHCC+K P IVDL+PG PY 
Sbjct: 67  IEAPGWQLGWSWMKKEVIWSMVGGQATEQGDCSKFKG-NIPHCCKKTPAIVDLLPGTPYN 126

Query: 138 LQVANCCKGGVLSSMRQESANYGAAFQMNVGKSSGKGVDSKMPANFTLGL--PGYTCSEP 197
            Q++NCC+GGV+S+  Q+ A   ++FQ++VG+S       + P N TL    PGYTC   
Sbjct: 127 QQISNCCRGGVISAWAQDPATAISSFQISVGQSGTTNTTVRAPRNITLKAPGPGYTCGPA 186

Query: 198 FQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFQSSPSPKCCVSLSSFYNSTIVPCPQCSC 257
             V P++F     RR TQ L TWN+TC YSQF +  +P CCVSLS+FYN TIVPCP CSC
Sbjct: 187 KLVKPSRFISADKRRKTQSLLTWNITCTYSQFLARKTPTCCVSLSAFYNETIVPCPTCSC 246

[Close]

BLAST of Lsi05G001550 vs. Swiss-Prot
Match: COBL1_ARATH (COBRA-like protein 1 OS=Arabidopsis thaliana GN=COBL1 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.6e-73
Identity = 134/274 (48.91%), Postives = 173/274 (63.14%), Query Frame = 1


Query: 18  RFMVFILILFSLTCSFSPSYGYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQLFRHV 77
           +F + I+ L S +   +PS  YD LDP  NIT+ WD +   GD Y   V++YNFQ +RH+
Sbjct: 14  KFGISIIFLVSFS-GLTPSEAYDPLDPSGNITVKWDIITWTGDGYVATVTVYNFQQYRHI 73

Query: 78  ELPGWKLGWSWKGEEVIWSMWGAEATQQGNCSKYIGRELPHCCEKKPVIVDLMPGAPYKL 137
           + PGW LGWSW   EVIW M G + T+QG+CSK+ G  +PHCC+K P +VDL+PG+PY  
Sbjct: 74  QAPGWTLGWSWAKREVIWGMNGGQTTEQGDCSKFKG-TIPHCCKKTPSVVDLLPGSPYNQ 133

Query: 138 QVANCCKGGVLSSMRQESANYGAAFQMNVGKSSGKGVDSKMPANFTLGL--PGYTCSEPF 197
           Q+ANCC+GGVL+S  Q+ A   +AFQ+ VG++       ++P NFTL    PGYTCS   
Sbjct: 134 QIANCCRGGVLNSWAQDPATAVSAFQLTVGQAGTTNKTVRVPKNFTLKAPGPGYTCSPAK 193

Query: 198 QVSPTKFSKDGGRRWTQVLETWNVTCVYSQFQSSPSPKCCVSLSSFYNSTIVPCPQCSCG 257
            V PT+F     RR TQ L TWNVTC YSQF +  +P CCVSLSSFYN TIV CP CSCG
Sbjct: 194 IVKPTRFIGTDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNKTIVSCPTCSCG 253

Query: 258 CQGL-KGTKCVKSGETPSVLQLPHEHYTAEVEPL 289
           C+   +   CV          +P+    A + PL
Sbjct: 254 CRNTSQPGNCVDPKGPRIASVIPNPGKNAYIPPL 285

[Close]

BLAST of Lsi05G001550 vs. Swiss-Prot
Match: COBL3_ORYSJ (COBRA-like protein 3 OS=Oryza sativa subsp. japonica GN=BC1L4 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.8e-72
Identity = 130/257 (50.58%), Postives = 168/257 (65.37%), Query Frame = 1


Query: 13  PCFDQRFMVFILILFSLTCSFSPSYGYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQ 72
           PC     ++   +LFS   +   +  YD+LDP  NITI WD +    D Y   V+++N+Q
Sbjct: 14  PCCCCAVLLAAALLFSAPAT---TEAYDALDPNGNITIKWDVMSWTPDGYVAVVTMFNYQ 73

Query: 73  LFRHVELPGWKLGWSWKGEEVIWSMWGAEATQQGNCSKYIGRELPHCCEKKPVIVDLMPG 132
            FRH++ PGW+LGW+W  +EVIWSM GA+ T+QG+CSK+ G   PHCC+K P +VDL+PG
Sbjct: 74  QFRHIQAPGWQLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGGT-PHCCKKDPTVVDLLPG 133

Query: 133 APYKLQVANCCKGGVLSSMRQESANYGAAFQMNVGKSSGKGVDSKMPANFTLGLPG--YT 192
            PY +Q+ANCCK GV+++  Q+ +N  ++FQ++VG +       K+P NFTL  PG  YT
Sbjct: 134 TPYNMQIANCCKAGVINTFNQDPSNAASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYT 193

Query: 193 CSEPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFQSSPSPKCCVSLSSFYNSTIVPCP 252
           C     V PTKF    GRR TQ L TWNVTC YSQF +  +P CCVSLSSFYN TIV CP
Sbjct: 194 CGRAMIVRPTKFFTGDGRRATQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTIVNCP 253

Query: 253 QCSCGCQ--GLKGTKCV 266
            CSCGCQ  G     CV
Sbjct: 254 TCSCGCQNNGTSPGSCV 266

[Close]

BLAST of Lsi05G001550 vs. TrEMBL
Match: A0A0D2R7Y7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G027100 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 1.2e-104
Identity = 178/273 (65.20%), Postives = 209/273 (76.56%), Query Frame = 1


Query: 3   NQFISVFQRNPCFDQRFMVFILILFSLTCSFSPSYGYDSLDPYANITITWDFLVENGDTY 62
           N F  VF R+       MV ILI F   C  SPSYGYD LDP  NITI WD L  N DT 
Sbjct: 2   NPFYFVFGRSAN-----MVLILIFFF--CPVSPSYGYDPLDPKGNITIKWDLLQSNSDTN 61

Query: 63  DVRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWSMWGAEATQQGNCSKYIGRELPHCCEK 122
           DV+VSL NFQL+RH+E PGWKLGW W G+EVIWS+ GAEAT+QGNCS++ G +LPHCCE 
Sbjct: 62  DVKVSLLNFQLYRHIEQPGWKLGWEWLGKEVIWSIQGAEATEQGNCSRFKGGQLPHCCEN 121

Query: 123 KPVIVDLMPGAPYKLQVANCCKGGVLSSMRQESANYGAAFQMNVGKSSGKGVDSKMPANF 182
           KP+IVDL+PGAPY +Q +NCCKGGVLSSM Q+   Y A FQMN+        D  MP NF
Sbjct: 122 KPLIVDLLPGAPYNIQTSNCCKGGVLSSMIQDPTKYAAVFQMNIRAGGAADSDFDMPQNF 181

Query: 183 TLGLPGYTCSEPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFQSSPSPKCCVSLSSFY 242
           +LG+PGYTC++P QV+P+K+S DGGRRWTQ L TWNVTC+YSQ+Q+S SPKCCVSLS+FY
Sbjct: 182 SLGVPGYTCAKPVQVAPSKYSSDGGRRWTQALGTWNVTCIYSQYQASTSPKCCVSLSAFY 241

Query: 243 NSTIVPCPQCSCGCQGLKGTKCVKSGETPSVLQ 276
           N +IV CP+CSC CQGL G+KCVK GETPS+LQ
Sbjct: 242 NDSIVHCPKCSCSCQGLPGSKCVKFGETPSLLQ 267

[Close]

BLAST of Lsi05G001550 vs. TrEMBL
Match: A0A0D2V8X8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G039400 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 5.1e-103
Identity = 174/273 (63.74%), Postives = 212/273 (77.66%), Query Frame = 1


Query: 3   NQFISVFQRNPCFDQRFMVFILILFSLTCSFSPSYGYDSLDPYANITITWDFLVENGDTY 62
           N F  V QR+  FD   ++   I+F L  S SPSYGYD LDP+ NITI WD L  N  + 
Sbjct: 7   NPFYFVVQRS--FD---VISSFIIFFLLSSVSPSYGYDPLDPHGNITIKWDLLQSNPGSN 66

Query: 63  DVRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWSMWGAEATQQGNCSKYIGRELPHCCEK 122
           DV+VS+ NFQL+RH+E PGWK+GW W G+EVIW+M GAEAT+QGNCS++ G +LPHCCEK
Sbjct: 67  DVKVSILNFQLYRHIEQPGWKMGWDWTGDEVIWAMQGAEATEQGNCSRFKGGQLPHCCEK 126

Query: 123 KPVIVDLMPGAPYKLQVANCCKGGVLSSMRQESANYGAAFQMNVGKSSGKGVDSKMPANF 182
            P IVDL+PGAPY +Q  NCCKGG+LSSM Q+ + +GA FQM+   ++ K     MP NF
Sbjct: 127 SPFIVDLLPGAPYNMQTTNCCKGGILSSMIQDPSKFGAVFQMSTSAATDKS-GFHMPENF 186

Query: 183 TLGLPGYTCSEPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFQSSPSPKCCVSLSSFY 242
           T+G+PGYTC++P QV+P+K+S DGGRRWTQ L TWNVTC+YSQF +S SPKCCVSLS+FY
Sbjct: 187 TIGVPGYTCAKPVQVAPSKYSSDGGRRWTQALGTWNVTCMYSQFLASTSPKCCVSLSAFY 246

Query: 243 NSTIVPCPQCSCGCQGLKGTKCVKSGETPSVLQ 276
           NSTIVPCP+CSC CQGL G KCVK GETPS+LQ
Sbjct: 247 NSTIVPCPKCSCSCQGLPGAKCVKFGETPSLLQ 273

[Close]

BLAST of Lsi05G001550 vs. TrEMBL
Match: A0A151T862_CAJCA (COBRA-like protein 3 OS=Cajanus cajan GN=KK1_017761 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 8.7e-103
Identity = 172/250 (68.80%), Postives = 208/250 (83.20%), Query Frame = 1


Query: 38  GYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWSM 97
           GYDSLDP+ NIT+TWDFL +NGDT+DV+VS+YNFQLFRH+E PGWKLGW+WKG+EVIW+M
Sbjct: 8   GYDSLDPFGNITVTWDFLSDNGDTFDVKVSIYNFQLFRHIEEPGWKLGWAWKGDEVIWAM 67

Query: 98  WGAEATQQGNCSKYIGRELPHCCEKKPVIVDLMPGAPYKLQVANCCKGGVLSSMRQESAN 157
            GAEAT++GNC+++ G++ PHCC+KKPVI+DLMPG PY +Q ANCCKGGVL+SM Q+ + 
Sbjct: 68  LGAEATEEGNCTRFRGQQKPHCCQKKPVIIDLMPGTPYNMQSANCCKGGVLTSMTQDVSK 127

Query: 158 YGAAFQMNVGKSSGKGVDSKMPANFTLGLPGYTCSEPFQVSPTKFSKDGGRRWTQVLETW 217
           +GA FQMN  K+S    +S MP NFTLG+ GY+C  PFQVSPTKF+KD G RW QVLETW
Sbjct: 128 HGATFQMNYIKASTS--NSSMPENFTLGVSGYSCGTPFQVSPTKFTKD-GHRWQQVLETW 187

Query: 218 NVTCVYSQFQSSPSPKCCVSLSSFYNSTIVPCPQCSCGCQGLKGTKCVKSGETPSVLQLP 277
           NVTC+YSQF +SP+PKCCVSLS+FYNSTIVPCP CSC CQGL G  CV S +T SVL+LP
Sbjct: 188 NVTCIYSQFLASPAPKCCVSLSAFYNSTIVPCPTCSCNCQGLPGADCVNSDKT-SVLKLP 247

Query: 278 HEHYTAEVEP 288
             +   EV P
Sbjct: 248 QTN-RGEVAP 252

[Close]

BLAST of Lsi05G001550 vs. TrEMBL
Match: A0A0A0L6L8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G225840 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.1e-102
Identity = 177/192 (92.19%), Postives = 181/192 (94.27%), Query Frame = 1


Query: 97  MWGAEATQQGNCSKYIGRELPHCCEKKPVIVDLMPGAPYKLQVANCCKGGVLSSMRQESA 156
           MWGAE TQQGNCSKY+GRELPHCCEKKP IVDLMPGAPYKLQVANCCK GVLSSMRQES+
Sbjct: 1   MWGAETTQQGNCSKYVGRELPHCCEKKPEIVDLMPGAPYKLQVANCCKAGVLSSMRQESS 60

Query: 157 NYGAAFQMNVGKSSGKGVDSKMPANFTLGLPGYTCSEPFQVSPTKFSKDGGRRWTQVLET 216
           N GAAFQMNVGKSSGK VDSKMPANFTLGLPGYTCSEPFQV PTKFSKDGGRRW QVLET
Sbjct: 61  NSGAAFQMNVGKSSGKDVDSKMPANFTLGLPGYTCSEPFQVPPTKFSKDGGRRWMQVLET 120

Query: 217 WNVTCVYSQFQSSPSPKCCVSLSSFYNSTIVPCPQCSCGCQGLKGTKCVKSGETPSVLQL 276
           WNVTCVYSQF+SSP+P CCVSLSSFYNSTIVPCPQCSCGCQGLKGTKCVKSGE PSVLQL
Sbjct: 121 WNVTCVYSQFRSSPTPGCCVSLSSFYNSTIVPCPQCSCGCQGLKGTKCVKSGEAPSVLQL 180

Query: 277 PHEHYTAEVEPL 289
           PHEH TAEVE L
Sbjct: 181 PHEHNTAEVEAL 192

[Close]

BLAST of Lsi05G001550 vs. TrEMBL
Match: A0A0S3S1N5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G004900 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 9.7e-102
Identity = 171/256 (66.80%), Postives = 203/256 (79.30%), Query Frame = 1


Query: 22  FILILFSLTCSFSPSYGYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQLFRHVELPG 81
           FI I FSL  S   +Y +DSLDP+ NITITWD+  +NGDT DVRVS+YNFQLFRHVE PG
Sbjct: 7   FIFIFFSLIAS---NYAFDSLDPFGNITITWDYFSDNGDTVDVRVSIYNFQLFRHVEEPG 66

Query: 82  WKLGWSWKGEEVIWSMWGAEATQQGNCSKYIGRELPHCCEKKPVIVDLMPGAPYKLQVAN 141
           W+LGW+WKG+EVIWSM GAEA +QGNC+++ G++ PHCC+K+PVI+DLMPG PY +Q AN
Sbjct: 67  WRLGWAWKGDEVIWSMLGAEAKEQGNCTRFRGQQKPHCCKKEPVIIDLMPGTPYNMQTAN 126

Query: 142 CCKGGVLSSMRQESANYGAAFQMNVGKSSGKGVDSKMPANFTLGLPGYTCSEPFQVSPTK 201
           CCK G+L+S++Q+    GA FQMN  K S  G    MP NFTLG+PGY+C  PFQV PT 
Sbjct: 127 CCKAGILTSLKQDHTKLGATFQMNYVKPSDSGPGFTMPENFTLGIPGYSCGTPFQVPPTM 186

Query: 202 FSKDGGRRWTQVLETWNVTCVYSQFQSSPSPKCCVSLSSFYNSTIVPCPQCSCGCQGLKG 261
           F+KD G RW QVLETWNVTC+YSQF +SP+PKCCVSLS+FYNSTIVPCP CSC CQGL G
Sbjct: 187 FTKD-GHRWQQVLETWNVTCIYSQFLASPAPKCCVSLSAFYNSTIVPCPTCSCNCQGLPG 246

Query: 262 TKCVKSGETPSVLQLP 278
             CV S +T SVLQ P
Sbjct: 247 ATCVDSDKT-SVLQPP 257

[Close]

BLAST of Lsi05G001550 vs. TAIR10
Match: AT1G09790.1 (AT1G09790.1 COBRA-like protein 6 precursor)

HSP 1 Score: 300.8 bits (769), Expect = 9.9e-82
Identity = 142/257 (55.25%), Postives = 172/257 (66.93%), Query Frame = 1


Query: 38  GYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWSM 97
           GYD LDP+  I I WD L+ +   + V+V+L N Q +RHVE PGWKL W W  +EVIW M
Sbjct: 35  GYDPLDPFGKIIIKWDLLLSSPGQHHVQVTLENMQEYRHVEKPGWKLSWHWLNQEVIWDM 94

Query: 98  WGAEATQQGNCSKYIGR-ELPHCCEKKPVIVDLMPGAPYKLQVANCCKGGVLSSMRQESA 157
            GAE T+QGNCS +     LPHCC ++P IVDL+PGA   +QVANCC+GGVL+SM Q+ A
Sbjct: 95  KGAETTEQGNCSAFASSGNLPHCCLERPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHA 154

Query: 158 NYGAAFQMNVGKSSGKGVDSKMPANFTLGLPGYTCSEPFQVSPTKFSKDGGRRWTQVLET 217
           N+ +AF M VG S     +  MP+NF +G+PGY+C     VSPTKFS D GRR TQ L T
Sbjct: 155 NHVSAFHMTVGSSPDGPEEFNMPSNFDIGVPGYSCDNATSVSPTKFSTDKGRRKTQALAT 214

Query: 218 WNVTCVYSQFQSSPSPKCCVSLSSFYNSTIVPCPQCSCGCQGLKGTKCVKSGETPSVLQL 277
           W   CVYSQF+SSPSPKCCVSLS+FY   IVPCP CSCGC     + CVK GE P  L+ 
Sbjct: 215 WEAVCVYSQFRSSPSPKCCVSLSAFYYQNIVPCPTCSCGC---SSSHCVKDGELPPYLEQ 274

Query: 278 PHEHYTAEVEPLGNSGD 294
            H+    EV P+    D
Sbjct: 275 KHDP-DEEVSPVVKCSD 287

[Close]

BLAST of Lsi05G001550 vs. TAIR10
Match: AT3G29810.1 (AT3G29810.1 COBRA-like protein 2 precursor)

HSP 1 Score: 277.7 bits (709), Expect = 9.0e-75
Identity = 129/243 (53.09%), Postives = 167/243 (68.72%), Query Frame = 1


Query: 18  RFMVFILILFSLTC-SFSPSYGYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQLFRH 77
           RF   +L L S T  +F+ +  YD+LDPY NITI WD +   GD Y   V+++NFQ +RH
Sbjct: 7   RFSFLLLFLCSWTSFTFTTTEAYDALDPYGNITIKWDIMSWTGDGYVAVVTIFNFQQYRH 66

Query: 78  VELPGWKLGWSWKGEEVIWSMWGAEATQQGNCSKYIGRELPHCCEKKPVIVDLMPGAPYK 137
           +E PGW+LGWSW  +EVIWSM G +AT+QG+CSK+ G  +PHCC+K P IVDL+PG PY 
Sbjct: 67  IEAPGWQLGWSWMKKEVIWSMVGGQATEQGDCSKFKG-NIPHCCKKTPAIVDLLPGTPYN 126

Query: 138 LQVANCCKGGVLSSMRQESANYGAAFQMNVGKSSGKGVDSKMPANFTLGL--PGYTCSEP 197
            Q++NCC+GGV+S+  Q+ A   ++FQ++VG+S       + P N TL    PGYTC   
Sbjct: 127 QQISNCCRGGVISAWAQDPATAISSFQISVGQSGTTNTTVRAPRNITLKAPGPGYTCGPA 186

Query: 198 FQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFQSSPSPKCCVSLSSFYNSTIVPCPQCSC 257
             V P++F     RR TQ L TWN+TC YSQF +  +P CCVSLS+FYN TIVPCP CSC
Sbjct: 187 KLVKPSRFISADKRRKTQSLLTWNITCTYSQFLARKTPTCCVSLSAFYNETIVPCPTCSC 246

[Close]

BLAST of Lsi05G001550 vs. TAIR10
Match: AT3G02210.1 (AT3G02210.1 COBRA-like protein 1 precursor)

HSP 1 Score: 276.2 bits (705), Expect = 2.6e-74
Identity = 134/274 (48.91%), Postives = 173/274 (63.14%), Query Frame = 1


Query: 18  RFMVFILILFSLTCSFSPSYGYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQLFRHV 77
           +F + I+ L S +   +PS  YD LDP  NIT+ WD +   GD Y   V++YNFQ +RH+
Sbjct: 14  KFGISIIFLVSFS-GLTPSEAYDPLDPSGNITVKWDIITWTGDGYVATVTVYNFQQYRHI 73

Query: 78  ELPGWKLGWSWKGEEVIWSMWGAEATQQGNCSKYIGRELPHCCEKKPVIVDLMPGAPYKL 137
           + PGW LGWSW   EVIW M G + T+QG+CSK+ G  +PHCC+K P +VDL+PG+PY  
Sbjct: 74  QAPGWTLGWSWAKREVIWGMNGGQTTEQGDCSKFKG-TIPHCCKKTPSVVDLLPGSPYNQ 133

Query: 138 QVANCCKGGVLSSMRQESANYGAAFQMNVGKSSGKGVDSKMPANFTLGL--PGYTCSEPF 197
           Q+ANCC+GGVL+S  Q+ A   +AFQ+ VG++       ++P NFTL    PGYTCS   
Sbjct: 134 QIANCCRGGVLNSWAQDPATAVSAFQLTVGQAGTTNKTVRVPKNFTLKAPGPGYTCSPAK 193

Query: 198 QVSPTKFSKDGGRRWTQVLETWNVTCVYSQFQSSPSPKCCVSLSSFYNSTIVPCPQCSCG 257
            V PT+F     RR TQ L TWNVTC YSQF +  +P CCVSLSSFYN TIV CP CSCG
Sbjct: 194 IVKPTRFIGTDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNKTIVSCPTCSCG 253

Query: 258 CQGL-KGTKCVKSGETPSVLQLPHEHYTAEVEPL 289
           C+   +   CV          +P+    A + PL
Sbjct: 254 CRNTSQPGNCVDPKGPRIASVIPNPGKNAYIPPL 285

[Close]

BLAST of Lsi05G001550 vs. TAIR10
Match: AT5G60920.1 (AT5G60920.1 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family)

HSP 1 Score: 267.3 bits (682), Expect = 1.2e-71
Identity = 122/241 (50.62%), Postives = 161/241 (66.80%), Query Frame = 1


Query: 19  FMVFILILFSLTCSFSPSYGYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQLFRHVE 78
           F+   ++    + SF+ +  YD+LDP  NIT+ WD +    D Y   V+++NFQ +RH++
Sbjct: 17  FLALWIVFLISSSSFTSTEAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQKYRHIQ 76

Query: 79  LPGWKLGWSWKGEEVIWSMWGAEATQQGNCSKYIGRELPHCCEKKPVIVDLMPGAPYKLQ 138
            PGW LGW W  +EVIWSM GA+ T+QG+CSKY G  +PHCC+K P +VDL+PG PY  Q
Sbjct: 77  SPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKG-NIPHCCKKDPTVVDLLPGTPYNQQ 136

Query: 139 VANCCKGGVLSSMRQESANYGAAFQMNVGKSSGKGVDSKMPANFTL--GLPGYTCSEPFQ 198
           +ANCCKGGV++S  Q+ A   ++FQ++VG +       ++P NFTL    PGYTC     
Sbjct: 137 IANCCKGGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPRNFTLMGPGPGYTCGPAKI 196

Query: 199 VSPTKFSKDGGRRWTQVLETWNVTCVYSQFQSSPSPKCCVSLSSFYNSTIVPCPQCSCGC 258
           V PTKF     RR TQ + TWN+TC YSQF +  +P CCVSLSSFYN TIV CP C+CGC
Sbjct: 197 VRPTKFVTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPTCACGC 256

[Close]

BLAST of Lsi05G001550 vs. TAIR10
Match: AT5G15630.1 (AT5G15630.1 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family)

HSP 1 Score: 254.2 bits (648), Expect = 1.1e-67
Identity = 122/248 (49.19%), Postives = 156/248 (62.90%), Query Frame = 1


Query: 22  FILILFSLTCSFSPSYGYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQLFRHVELPG 81
           F +I+F+ T        YD LDP  NITI WD +    D Y   V++ NFQ++RH++ PG
Sbjct: 11  FFMIIFTATA-------YDPLDPSGNITIKWDIMSWTADGYVATVTMNNFQIYRHIQNPG 70

Query: 82  WKLGWSWKGEEVIWSMWGAEATQQGNCSKYIGRELPHCCEKKPVIVDLMPGAPYKLQVAN 141
           W LGW+W  +EVIWSM GA+ T+QG+CSK+ G  +PHCC+K P +VDL+PG PY  Q +N
Sbjct: 71  WTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKG-NVPHCCKKTPTVVDLLPGVPYNQQFSN 130

Query: 142 CCKGGVLSSMRQESANYGAAFQMNVGKSSGKGVDSKMPANFTL--GLPGYTCSEPFQVSP 201
           CCKGGV+ +  Q+ +   + FQ++ G +       K+P NFTL    PGYTC     V  
Sbjct: 131 CCKGGVIGAWGQDPSAAVSQFQVSAGLAGTTNKTVKLPKNFTLLGPGPGYTCGPAKIVPS 190

Query: 202 TKFSKDGGRRWTQVLETWNVTCVYSQFQSSPSPKCCVSLSSFYNSTIVPCPQCSCGCQGL 261
           T F     RR TQ L TWNVTC YSQF +   P CCVS SSFYN TI PCP C+CGC+  
Sbjct: 191 TVFLTTDKRRKTQALMTWNVTCTYSQFLARKHPSCCVSFSSFYNDTITPCPSCACGCENK 248

Query: 262 KGTKCVKS 268
           K   CVK+
Sbjct: 251 K--SCVKA 248

[Close]

BLAST of Lsi05G001550 vs. NCBI nr
Match: gi|778680300|ref|XP_011651285.1| (PREDICTED: COBRA-like protein 6 [Cucumis sativus])

HSP 1 Score: 573.2 bits (1476), Expect = 2.9e-160
Identity = 265/288 (92.01%), Postives = 272/288 (94.44%), Query Frame = 1


Query: 1   MENQFISVFQRNPCFDQRFMVFILILFSLTCSFSPSYGYDSLDPYANITITWDFLVENGD 60
           MENQF S+FQRNPC+DQRF+VF LI  SLTCSFSPSYGYDSLDPYANITITWDFLVENGD
Sbjct: 1   MENQFFSIFQRNPCWDQRFIVFPLIFLSLTCSFSPSYGYDSLDPYANITITWDFLVENGD 60

Query: 61  TYDVRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWSMWGAEATQQGNCSKYIGRELPHCC 120
           TYDVRVSLYNFQLFRHVELPGWKLGWSWKGEEVIW MWGAE TQQGNCSKY+GRELPHCC
Sbjct: 61  TYDVRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWGMWGAETTQQGNCSKYVGRELPHCC 120

Query: 121 EKKPVIVDLMPGAPYKLQVANCCKGGVLSSMRQESANYGAAFQMNVGKSSGKGVDSKMPA 180
           EKKP IVDLMPGAPYKLQVANCCK GVLSSMRQES+N GAAFQMNVGKSSGK VDSKMPA
Sbjct: 121 EKKPEIVDLMPGAPYKLQVANCCKAGVLSSMRQESSNSGAAFQMNVGKSSGKDVDSKMPA 180

Query: 181 NFTLGLPGYTCSEPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFQSSPSPKCCVSLSS 240
           NFTLGLPGYTCSEPFQV PTKFSKDGGRRW QVLETWNVTCVYSQF+SSP+P CCVSLSS
Sbjct: 181 NFTLGLPGYTCSEPFQVPPTKFSKDGGRRWMQVLETWNVTCVYSQFRSSPTPGCCVSLSS 240

Query: 241 FYNSTIVPCPQCSCGCQGLKGTKCVKSGETPSVLQLPHEHYTAEVEPL 289
           FYNSTIVPCPQCSCGCQGLKGTKCVKSGE PSVLQLPHEH TAEVE L
Sbjct: 241 FYNSTIVPCPQCSCGCQGLKGTKCVKSGEAPSVLQLPHEHNTAEVEAL 288

[Close]

BLAST of Lsi05G001550 vs. NCBI nr
Match: gi|659112054|ref|XP_008456042.1| (PREDICTED: COBRA-like protein 6, partial [Cucumis melo])

HSP 1 Score: 566.2 bits (1458), Expect = 3.6e-158
Identity = 260/284 (91.55%), Postives = 267/284 (94.01%), Query Frame = 1


Query: 5   FISVFQRNPCFDQRFMVFILILFSLTCSFSPSYGYDSLDPYANITITWDFLVENGDTYDV 64
           F ++FQRNPC DQRF+VF LI  SLTCSFSPSYGYDSLDPYANITITWDFLVENGDTYDV
Sbjct: 42  FFTIFQRNPCLDQRFIVFALIFLSLTCSFSPSYGYDSLDPYANITITWDFLVENGDTYDV 101

Query: 65  RVSLYNFQLFRHVELPGWKLGWSWKGEEVIWSMWGAEATQQGNCSKYIGRELPHCCEKKP 124
           RVSLYNFQLFRHVELPGWKLGWSWKGEEVIW MWGAE TQQGNCSKY+GRELPHCCEKKP
Sbjct: 102 RVSLYNFQLFRHVELPGWKLGWSWKGEEVIWGMWGAETTQQGNCSKYVGRELPHCCEKKP 161

Query: 125 VIVDLMPGAPYKLQVANCCKGGVLSSMRQESANYGAAFQMNVGKSSGKGVDSKMPANFTL 184
            IVDLMPGAPYKLQVANCCK GVLSSMRQE +NYGAAFQMNVGKSSGK VDSKMPANFTL
Sbjct: 162 EIVDLMPGAPYKLQVANCCKAGVLSSMRQEPSNYGAAFQMNVGKSSGKDVDSKMPANFTL 221

Query: 185 GLPGYTCSEPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFQSSPSPKCCVSLSSFYNS 244
           GLPGYTCSEPFQV PTKFSKDGGRRW QVLETWNVTCVYSQF+SSP+P CCVSLSSFYNS
Sbjct: 222 GLPGYTCSEPFQVPPTKFSKDGGRRWMQVLETWNVTCVYSQFRSSPTPGCCVSLSSFYNS 281

Query: 245 TIVPCPQCSCGCQGLKGTKCVKSGETPSVLQLPHEHYTAEVEPL 289
           TIVPCPQCSCGCQGLKGTKCVK GE PSVLQLPHEH TAEVEPL
Sbjct: 282 TIVPCPQCSCGCQGLKGTKCVKLGEAPSVLQLPHEHNTAEVEPL 325

[Close]

BLAST of Lsi05G001550 vs. NCBI nr
Match: gi|1009124218|ref|XP_015878948.1| (PREDICTED: COBRA-like protein 6 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 401.4 bits (1030), Expect = 1.5e-108
Identity = 179/253 (70.75%), Postives = 210/253 (83.00%), Query Frame = 1


Query: 38  GYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWSM 97
           GYD LDP+ANITITWDF+++   +YD+ VS++NFQLFRH+E PGWKLGW+WK +EVIW+M
Sbjct: 52  GYDPLDPHANITITWDFILKTDSSYDITVSIHNFQLFRHIEKPGWKLGWTWKEDEVIWNM 111

Query: 98  WGAEATQQGNCSKYIGR--ELPHCCEKKPVIVDLMPGAPYKLQVANCCKGGVLSSMRQES 157
           WGAEAT+QGNCSK+IG   +LPHCCEK P IVDLMPGAPY +QV+NCCKGGVL+SM Q+ 
Sbjct: 112 WGAEATEQGNCSKFIGGGGKLPHCCEKNPTIVDLMPGAPYNMQVSNCCKGGVLTSMVQDY 171

Query: 158 ANYGAAFQMNVGKSSGKGVDSKMPANFTLGLPGYTCSEPFQVSPTKFSKDGGRRWTQVLE 217
           +   AAF+M +G  S    +  MP NF+LGLPGY+C +PF V PTKFS DGGRR+TQ LE
Sbjct: 172 SKSLAAFRMVIGSFSNNITNINMPFNFSLGLPGYSCGDPFHVPPTKFSHDGGRRFTQALE 231

Query: 218 TWNVTCVYSQFQSSPSPKCCVSLSSFYNSTIVPCPQCSCGCQGLKGTKCVKSGETPSVLQ 277
           TWNVTC YSQF+SSP+PKCCVSLSSFYN TIVPCPQCSC CQGL GTKCVK GETPS+L+
Sbjct: 232 TWNVTCSYSQFRSSPAPKCCVSLSSFYNDTIVPCPQCSCNCQGLPGTKCVKPGETPSLLE 291

Query: 278 LPHEHYTAEVEPL 289
           LP  H T EV PL
Sbjct: 292 LPPTHVTQEVPPL 304

[Close]

BLAST of Lsi05G001550 vs. NCBI nr
Match: gi|694437643|ref|XP_009345837.1| (PREDICTED: COBRA-like protein 6 [Pyrus x bretschneideri])

HSP 1 Score: 395.6 bits (1015), Expect = 8.4e-107
Identity = 181/271 (66.79%), Postives = 216/271 (79.70%), Query Frame = 1


Query: 21  VFILILFSLTCSFSPSYGYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQLFRHVELP 80
           + ++ +FSL  SF  SYGYD LDPYANIT+ WDFL ++G + D++VS+YNFQ FRHV+ P
Sbjct: 3   LLLVFIFSLINSFGLSYGYDPLDPYANITVRWDFLQQSGSSSDIKVSIYNFQQFRHVDRP 62

Query: 81  GWKLGWSWKGEEVIWSMWGAEATQQGNCSKYIGR-ELPHCCEKKPVIVDLMPGAPYKLQV 140
           GWKLGW+WKG+EVIW MWGAEAT+QGNCSK+ G  +LPHCC+KKPVI+DL+P AP+  Q 
Sbjct: 63  GWKLGWTWKGDEVIWDMWGAEATEQGNCSKFKGSPDLPHCCKKKPVIIDLLPEAPFNKQY 122

Query: 141 ANCCKGGVLSSMRQESANYGAAFQMNVGKSSGKGVDSKMPANFTLGLPGYTCSEPFQVSP 200
            NCCKGG LSSM Q+S+ +G++F M+VG  +GK  D  MP NFTLGLPGYTC  PFQV P
Sbjct: 123 FNCCKGGELSSMIQDSSKFGSSFAMSVGSLAGK--DIVMPTNFTLGLPGYTCGMPFQVQP 182

Query: 201 TKFSKDGGRRWTQVLETWNVTCVYSQFQSSPSPKCCVSLSSFYNSTIVPCPQCSCGCQGL 260
           TKFS D GRRW QVLETWNVTC+YS  ++SPSPKCCVSLS+FY STIVPCP+CSCGCQGL
Sbjct: 183 TKFSHD-GRRWKQVLETWNVTCIYSLIRASPSPKCCVSLSAFYGSTIVPCPKCSCGCQGL 242

Query: 261 KGTKCVK--SGETPSVLQLPHEHYTAEVEPL 289
            G KCV     E+P +LQLPH H T E  PL
Sbjct: 243 PGVKCVNRPGEESPPLLQLPHAHETEEPSPL 270

[Close]

BLAST of Lsi05G001550 vs. NCBI nr
Match: gi|823203687|ref|XP_012436223.1| (PREDICTED: COBRA-like protein 6 isoform X1 [Gossypium raimondii])

HSP 1 Score: 387.9 bits (995), Expect = 1.8e-104
Identity = 178/273 (65.20%), Postives = 209/273 (76.56%), Query Frame = 1


Query: 3   NQFISVFQRNPCFDQRFMVFILILFSLTCSFSPSYGYDSLDPYANITITWDFLVENGDTY 62
           N F  VF R+       MV ILI F   C  SPSYGYD LDP  NITI WD L  N DT 
Sbjct: 2   NPFYFVFGRSAN-----MVLILIFFF--CPVSPSYGYDPLDPKGNITIKWDLLQSNSDTN 61

Query: 63  DVRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWSMWGAEATQQGNCSKYIGRELPHCCEK 122
           DV+VSL NFQL+RH+E PGWKLGW W G+EVIWS+ GAEAT+QGNCS++ G +LPHCCE 
Sbjct: 62  DVKVSLLNFQLYRHIEQPGWKLGWEWLGKEVIWSIQGAEATEQGNCSRFKGGQLPHCCEN 121

Query: 123 KPVIVDLMPGAPYKLQVANCCKGGVLSSMRQESANYGAAFQMNVGKSSGKGVDSKMPANF 182
           KP+IVDL+PGAPY +Q +NCCKGGVLSSM Q+   Y A FQMN+        D  MP NF
Sbjct: 122 KPLIVDLLPGAPYNIQTSNCCKGGVLSSMIQDPTKYAAVFQMNIRAGGAADSDFDMPQNF 181

Query: 183 TLGLPGYTCSEPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFQSSPSPKCCVSLSSFY 242
           +LG+PGYTC++P QV+P+K+S DGGRRWTQ L TWNVTC+YSQ+Q+S SPKCCVSLS+FY
Sbjct: 182 SLGVPGYTCAKPVQVAPSKYSSDGGRRWTQALGTWNVTCIYSQYQASTSPKCCVSLSAFY 241

Query: 243 NSTIVPCPQCSCGCQGLKGTKCVKSGETPSVLQ 276
           N +IV CP+CSC CQGL G+KCVK GETPS+LQ
Sbjct: 242 NDSIVHCPKCSCSCQGLPGSKCVKFGETPSLLQ 267

The following BLAST results are available for this feature:

BLAST of Lsi05G001550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
COBL6_ARATH	1.8e-80	55.25	COBRA-like protein 6 OS=Arabidopsis thaliana GN=COBL6 PE=2 SV=2	[more]
COBL1_ORYSJ	2.2e-75	51.46	COBRA-like protein 1 OS=Oryza sativa subsp. japonica GN=BC1L6 PE=2 SV=1	[more]
COBL2_ARATH	1.6e-73	53.09	COBRA-like protein 2 OS=Arabidopsis thaliana GN=COBL2 PE=1 SV=2	[more]
COBL1_ARATH	4.6e-73	48.91	COBRA-like protein 1 OS=Arabidopsis thaliana GN=COBL1 PE=2 SV=1	[more]
COBL3_ORYSJ	1.8e-72	50.58	COBRA-like protein 3 OS=Oryza sativa subsp. japonica GN=BC1L4 PE=2 SV=1	[more]

BLAST of Lsi05G001550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0D2R7Y7_GOSRA	1.2e-104	65.20	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G027100 PE=4 SV=1	[more]
A0A0D2V8X8_GOSRA	5.1e-103	63.74	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G039400 PE=4 SV=1	[more]
A0A151T862_CAJCA	8.7e-103	68.80	COBRA-like protein 3 OS=Cajanus cajan GN=KK1_017761 PE=4 SV=1	[more]
A0A0A0L6L8_CUCSA	1.1e-102	92.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G225840 PE=4 SV=1	[more]
A0A0S3S1N5_PHAAN	9.7e-102	66.80	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G004900 PE=...	[more]

BLAST of Lsi05G001550 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09790.1	9.9e-82	55.25	COBRA-like protein 6 precursor	[more]
AT3G29810.1	9.0e-75	53.09	COBRA-like protein 2 precursor	[more]
AT3G02210.1	2.6e-74	48.91	COBRA-like protein 1 precursor	[more]
AT5G60920.1	1.2e-71	50.62	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored pro...	[more]
AT5G15630.1	1.1e-67	49.19	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored pro...	[more]

BLAST of Lsi05G001550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680300\|ref\|XP_011651285.1\|	2.9e-160	92.01	PREDICTED: COBRA-like protein 6 [Cucumis sativus]	[more]
gi\|659112054\|ref\|XP_008456042.1\|	3.6e-158	91.55	PREDICTED: COBRA-like protein 6, partial [Cucumis melo]	[more]
gi\|1009124218\|ref\|XP_015878948.1\|	1.5e-108	70.75	PREDICTED: COBRA-like protein 6 isoform X1 [Ziziphus jujuba]	[more]
gi\|694437643\|ref\|XP_009345837.1\|	8.4e-107	66.79	PREDICTED: COBRA-like protein 6 [Pyrus x bretschneideri]	[more]
gi\|823203687\|ref\|XP_012436223.1\|	1.8e-104	65.20	PREDICTED: COBRA-like protein 6 isoform X1 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0030247	polysaccharide binding
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Vocabulary: **Cellular Component**
Term	Definition
GO:0031225	anchored component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0016049	cell growth
GO:0010215	cellulose microfibril organization

Vocabulary: **INTERPRO**
Term	Definition
IPR012291	Cellulose-binding family II/chitobiase, carbohydrate-binding domain
IPR006918	COBRA_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016049	cell growth
biological_process	GO:0010215	cellulose microfibril organization
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0030247	polysaccharide binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0030246	carbohydrate binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G001550.1	Lsi05G001550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006918	COBRA, plant	PRODOM	PD140986		coord: 21..223 score: 7.0
IPR006918	COBRA, plant	PIR	PIRSF038122	COBRA	coord: 13..295 score: 6.6E
IPR006918	COBRA, plant	PFAM	PF04833	COBRA	coord: 62..224 score: 1.9
IPR012291	Cellulose-binding family II/chitobiase, carbohydrate-binding domain	GENE3D	G3DSA:2.60.40.290		coord: 54..107 score: 9.
None	No IPR available	PANTHER	PTHR31673	FAMILY NOT NAMED	coord: 1..279 score: 5.4E
None	No IPR available	PANTHER	PTHR31673:SF5	COBRA-LIKE PROTEIN 6	coord: 1..279 score: 5.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G001550	Csa3G225840	Cucumber (Chinese Long) v2	culsiB211
Lsi05G001550	CSPI03G19160	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G001550	CmoCh04G005770	Cucurbita moschata (Rifu)	cmolsiB683
Lsi05G001550	Cla004306	Watermelon (97103) v1	lsiwmB361
Lsi05G001550	ClCG05G009430	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G001550	MELO3C019428.2	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G001550	Cla97C05G091790	Watermelon (97103) v2	lsiwmbB329
Lsi05G001550	Bhi01G001185	Wax gourd	lsiwgoB431
Lsi05G001550	Cp4.1LG01g01700	Cucurbita pepo (Zucchini)	cpelsiB369
Lsi05G001550	CsGy3G019070	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G001550	Carg13197	Silver-seed gourd	carlsiB039
Lsi05G001550	CsaV3_3G019280	Cucumber (Chinese Long) v3	cuclsiB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G001550	Silver-seed gourd	carlsiB595
Lsi05G001550	Cucumber (Gy14) v1	cgylsiB003
Lsi05G001550	Cucurbita maxima (Rimu)	cmalsiB316
Lsi05G001550	Cucurbita maxima (Rimu)	cmalsiB690
Lsi05G001550	Cucurbita moschata (Rifu)	cmolsiB304
Lsi05G001550	Cucurbita pepo (Zucchini)	cpelsiB177
Lsi05G001550	Melon (DHL92) v3.5.1	lsimeB368