Carg13197 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13197
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	COBRA-like protein
Location	Cucurbita_argyrosperma_scaffold_101 : 877917 .. 879926 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTCATCCGTTCATCCATTCATCCGTTCATCCATTCATCACTCCAATGGCATGCATTCAATCCCCATTATGCATTCTTCTTCTTCATCTCCTTCGTTTCCCCTTTTCGATCTCAAACGTTTCACATTCAAACCACAAAATCCCCAGCCGCCTCCATTTCCTACAGTTTCCAAACTCAGATTTCATTGAAGATCTCCCACTGGCTCTCTATTTGGGGTTTTGAATATCAATCTTGTTTAGGGTATGGAGAATCCGTTCTTTTCCGTTTTCCAAACAAACCCATGTTTGTTTCTGGATCAAAGATCAAATTTCATTGCCTGTCTTTTGATCTTCTTCTCTCTCACCTGCTCCTTCTCGCCCTCCTGTAAGTATTTTCCTCTTCTTTGTATGTTTTGTTTGTGTTCTGTTTCATTTGAACGAAGGGTTCTCTTGTGAAGGAATAGAAGAAATTTAATATAAACCTTATAGATTGAAATACAGATGAATATGATTCCTTGGACCCTTATGCCAACCTTACTATCACATGGGATTTCTTGGTGGAGAATGGAGATACTTTTGATGTAAGTATCACTGTTCTGTTCCTGGTTTTTCTGCTCAATTTTTAGTTTATCCCTGTTATCATCTATGATATTCGATGAACTTAAGAATGTTTATAAAAGAGCCTTGTGTTAGAATGTTGTTGTTCTGTCTTATCTTAAGATGATCTATGATTGAGTGGATCCATGAATTGTTGCTCAGTATCGGCTGCAAATGGATAGCTATAAACGAGTTTGAGAAATAGTTTATCTAATAGATATTAGACATACATATCTCCAATCTTTTGGGATCCCACATCAATTGGAGGAGGGAACATAACATACTTATAAGGATGTGAAAAACCTCTTCCTAACAGACGCATTTTAGAAATCTTGAGAGAAAGTCTAAAGAGGACAGTATCTACTAGCGGAGGGCTTGAATTGTTACAAATATACTATACATACTTTAGTCGTATGTTTTCCTATCTAATGGAAAGGTTTTCTTGATCTAATGTATTTAGCTTAGGAAGGTTGTTCCTGTAAGCAATGTCATATCGTTTTTTCGTTGTAAGATAATGTCGTTTCAAACTCATTGAACTATCGAGTCTTGGGAGCTCATTCAACTACCTACAACTTCTGCACCTCTCGTTTTTGTTCAAAATCAATTCATTATGTTAAACGTTACAGGTGAGAGTTTCGTTATACAATTTCCAACTGTTTCGTCATGTGGAACTTCCTGGTTGGAAACTTGGCTGGTCATGGAAAGGTGATGAGGTTATATGGAGTATGTGGGGGGCAGAGGCTACTCAGCAAGGAAATTGCTCCAAATACATAGGCAAGGAGCTTCCTCATTGTTGTGAGAAGAAGCCTGTGATAGTTGATCTTATGCCTGGAGCTCCTTATAAGTTGCAGGTGGCCAATTGTTGTAAAGGAGGTGTGCTATCTTCCATGAGACAAGACCCTGCAAACTATGGAGCTGCCTTCCAAATGAATATCGGGAAGTCTGCTGGGAAGGGTGTAGATAGCAAAATGCCTGCAAATTTCACTCTGGGGCTTCCTGGCTATACTTGTAGTGACCCATTTCAAGTCTCTCCAACCAAGTTCAGTAAGGATGGCGGTCGTCGGTGGACACAAGTTCTAGGTAAGTACTTGATGAATGGTTAACTTAAAGGTCACTTTTAGATTGAGTTGAGGTGTGGATATCTCTGTTGGTTCTGCTGAAATCATGGTTGAGATTGGTCTTTTTGTGTTAGCTTTATGAGTAGAAAACAGCTGCAATGTCGTAGCTTAACCGAACTCCCTCTCTGAGATCTGTATATTATTTCTGATTGTAGAAACATGGAACGTGACATGTGTTTACTCGCAATTCCGATCATCACCATCTCCGGGGTGCTGTGTTTCATTGTCGTCCTTCTATAACAGCACCATTGTTCCTTGCCCTCAGTGCAGCTGTGGCTGCCAAGGGCTAGAGGGAACGAAATGCATTGAGTAA

mRNA sequence

ATGCATTCATCCGTTCATCCATTCATCCGTTCATCCATTCATCACTCCAATGGCATGCATTCAATCCCCATTATGCATTCTTCTTCTTCATCTCCTTCGTTTCCCCTTTTCGATCTCAAACGTTTCACATTCAAACCACAAAATCCCCAGCCGCCTCCATTTCCTACAGTGAGAGTTTCGTTATACAATTTCCAACTGTTTCGTCATGTGGAACTTCCTGGTTGGAAACTTGGCTGGTCATGGAAAGGTGATGAGGTTATATGGAGTATGTGGGGGGCAGAGGCTACTCAGCAAGGAAATTGCTCCAAATACATAGGCAAGGAGCTTCCTCATTGTTGTGAGAAGAAGCCTGTGATAGTTGATCTTATGCCTGGAGCTCCTTATAAGTTGCAGGTGGCCAATTGTTGTAAAGGAGGTGTGCTATCTTCCATGAGACAAGACCCTGCAAACTATGGAGCTGCCTTCCAAATGAATATCGGGAAGTCTGCTGGGAAGGGTGTAGATAGCAAAATGCCTGCAAATTTCACTCTGGGGCTTCCTGGCTATACTTGTAGTGACCCATTTCAAGTCTCTCCAACCAAGTTCAGTAAGGATGGCGGTCGTCGGTGGACACAAGTTCTAGAAACATGGAACGTGACATGTGTTTACTCGCAATTCCGATCATCACCATCTCCGGGGTGCTGTGTTTCATTGTCGTCCTTCTATAACAGCACCATTGTTCCTTGCCCTCAGTGCAGCTGTGGCTGCCAAGGGCTAGAGGGAACGAAATGCATTGAGTAA

Coding sequence (CDS)

ATGCATTCATCCGTTCATCCATTCATCCGTTCATCCATTCATCACTCCAATGGCATGCATTCAATCCCCATTATGCATTCTTCTTCTTCATCTCCTTCGTTTCCCCTTTTCGATCTCAAACGTTTCACATTCAAACCACAAAATCCCCAGCCGCCTCCATTTCCTACAGTGAGAGTTTCGTTATACAATTTCCAACTGTTTCGTCATGTGGAACTTCCTGGTTGGAAACTTGGCTGGTCATGGAAAGGTGATGAGGTTATATGGAGTATGTGGGGGGCAGAGGCTACTCAGCAAGGAAATTGCTCCAAATACATAGGCAAGGAGCTTCCTCATTGTTGTGAGAAGAAGCCTGTGATAGTTGATCTTATGCCTGGAGCTCCTTATAAGTTGCAGGTGGCCAATTGTTGTAAAGGAGGTGTGCTATCTTCCATGAGACAAGACCCTGCAAACTATGGAGCTGCCTTCCAAATGAATATCGGGAAGTCTGCTGGGAAGGGTGTAGATAGCAAAATGCCTGCAAATTTCACTCTGGGGCTTCCTGGCTATACTTGTAGTGACCCATTTCAAGTCTCTCCAACCAAGTTCAGTAAGGATGGCGGTCGTCGGTGGACACAAGTTCTAGAAACATGGAACGTGACATGTGTTTACTCGCAATTCCGATCATCACCATCTCCGGGGTGCTGTGTTTCATTGTCGTCCTTCTATAACAGCACCATTGTTCCTTGCCCTCAGTGCAGCTGTGGCTGCCAAGGGCTAGAGGGAACGAAATGCATTGAGTAA

Protein sequence

MHSSVHPFIRSSIHHSNGMHSIPIMHSSSSSPSFPLFDLKRFTFKPQNPQPPPFPTVRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTLGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYNSTIVPCPQCSCGCQGLEGTKCIE

Homology

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BLAST of Carg13197 vs. NCBI nr
Match: XP_022942251.1 (COBRA-like protein 6 [Cucurbita moschata])

HSP 1 Score: 443.4 bits (1139), Expect = 5.5e-121
Identity = 199/203 (98.03%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK
Sbjct: 68  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 127

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 176
           PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT
Sbjct: 128 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 187

Query: 177 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 236
           LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWN+TCVYSQFRSSP+PGCCVSLSSFYN
Sbjct: 188 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNMTCVYSQFRSSPAPGCCVSLSSFYN 247

Query: 237 STIVPCPQCSCGCQGLEGTKCIE 260
           STIVPCPQCSCGCQG+EGTKC+E
Sbjct: 248 STIVPCPQCSCGCQGIEGTKCVE 270

[Close]

BLAST of Carg13197 vs. NCBI nr
Match: XP_023533604.1 (COBRA-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 442.2 bits (1136), Expect = 1.2e-120
Identity = 198/203 (97.54%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           VRVSLYN+QLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK
Sbjct: 68  VRVSLYNYQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 127

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 176
           PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT
Sbjct: 128 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 187

Query: 177 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 236
           LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSP+PGCCVSLSSFYN
Sbjct: 188 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPAPGCCVSLSSFYN 247

Query: 237 STIVPCPQCSCGCQGLEGTKCIE 260
           STI+PCP+CSCGCQGLEGTKC+E
Sbjct: 248 STIIPCPRCSCGCQGLEGTKCVE 270

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BLAST of Carg13197 vs. NCBI nr
Match: XP_022980772.1 (COBRA-like protein 6 [Cucurbita maxima])

HSP 1 Score: 441.0 bits (1133), Expect = 2.7e-120
Identity = 199/203 (98.03%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK
Sbjct: 68  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 127

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 176
           PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGK VDSKMPANFT
Sbjct: 128 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKVVDSKMPANFT 187

Query: 177 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 236
           LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSP+PGCCVSLSSFYN
Sbjct: 188 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPAPGCCVSLSSFYN 247

Query: 237 STIVPCPQCSCGCQGLEGTKCIE 260
           STIVPCPQCSCGCQG+EGTKC+E
Sbjct: 248 STIVPCPQCSCGCQGIEGTKCVE 270

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BLAST of Carg13197 vs. NCBI nr
Match: XP_022136486.1 (COBRA-like protein 6 [Momordica charantia])

HSP 1 Score: 423.7 bits (1088), Expect = 4.5e-115
Identity = 186/203 (91.63%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           VRVS+YNFQLFRHVELPGWKLGWSWKGDEVIW MWGAEATQQGNCSKYIG+ELPHCCEK+
Sbjct: 52  VRVSIYNFQLFRHVELPGWKLGWSWKGDEVIWGMWGAEATQQGNCSKYIGRELPHCCEKE 111

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 176
           PVIVDLMPGAPYKLQVANCC+GGVLSSM+QDP NYGAAFQMN+GKSAGK VD KMP NFT
Sbjct: 112 PVIVDLMPGAPYKLQVANCCRGGVLSSMKQDPTNYGAAFQMNVGKSAGKDVDGKMPENFT 171

Query: 177 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 236
           +GLPGYTC DPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSP+PGCCVSLSSFYN
Sbjct: 172 MGLPGYTCGDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPAPGCCVSLSSFYN 231

Query: 237 STIVPCPQCSCGCQGLEGTKCIE 260
           STIVPCPQCSCGCQGL GTKC++
Sbjct: 232 STIVPCPQCSCGCQGLAGTKCVK 254

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BLAST of Carg13197 vs. NCBI nr
Match: XP_008456042.2 (PREDICTED: COBRA-like protein 6, partial [Cucumis melo])

HSP 1 Score: 418.7 bits (1075), Expect = 1.4e-113
Identity = 184/203 (90.64%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           VRVSLYNFQLFRHVELPGWKLGWSWKG+EVIW MWGAE TQQGNCSKY+G+ELPHCCEKK
Sbjct: 98  VRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWGMWGAETTQQGNCSKYVGRELPHCCEKK 157

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 176
           P IVDLMPGAPYKLQVANCCK GVLSSMRQ+P+NYGAAFQMN+GKS+GK VDSKMPANFT
Sbjct: 158 PEIVDLMPGAPYKLQVANCCKAGVLSSMRQEPSNYGAAFQMNVGKSSGKDVDSKMPANFT 217

Query: 177 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 236
           LGLPGYTCS+PFQV PTKFSKDGGRRW QVLETWNVTCVYSQFRSSP+PGCCVSLSSFYN
Sbjct: 218 LGLPGYTCSEPFQVPPTKFSKDGGRRWMQVLETWNVTCVYSQFRSSPTPGCCVSLSSFYN 277

Query: 237 STIVPCPQCSCGCQGLEGTKCIE 260
           STIVPCPQCSCGCQGL+GTKC++
Sbjct: 278 STIVPCPQCSCGCQGLKGTKCVK 300

[Close]

BLAST of Carg13197 vs. TAIR10
Match: AT1G09790.1 (COBRA-like protein 6 precursor)

HSP 1 Score: 263.5 bits (672), Expect = 1.4e-70
Identity = 119/194 (61.34%), Postives = 140/194 (72.16%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGK-ELPHCCEK 116
           V+V+L N Q +RHVE PGWKL W W   EVIW M GAE T+QGNCS +     LPHCC +
Sbjct: 61  VQVTLENMQEYRHVEKPGWKLSWHWLNQEVIWDMKGAETTEQGNCSAFASSGNLPHCCLE 120

Query: 117 KPVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANF 176
           +P IVDL+PGA   +QVANCC+GGVL+SM QD AN+ +AF M +G S     +  MP+NF
Sbjct: 121 RPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHANHVSAFHMTVGSSPDGPEEFNMPSNF 180

Query: 177 TLGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFY 236
            +G+PGY+C +   VSPTKFS D GRR TQ L TW   CVYSQFRSSPSP CCVSLS+FY
Sbjct: 181 DIGVPGYSCDNATSVSPTKFSTDKGRRKTQALATWEAVCVYSQFRSSPSPKCCVSLSAFY 240

Query: 237 NSTIVPCPQCSCGC 250
              IVPCP CSCGC
Sbjct: 241 YQNIVPCPTCSCGC 254

[Close]

BLAST of Carg13197 vs. TAIR10
Match: AT5G60920.1 (COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family)

HSP 1 Score: 246.1 bits (627), Expect = 2.3e-65
Identity = 110/205 (53.66%), Postives = 141/205 (68.78%), Query Frame = 0


Query: 59  VSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPV 118
           V+++NFQ +RH++ PGW LGW W   EVIWSM GA+ T+QG+CSKY G  +PHCC+K P 
Sbjct: 64  VTMFNFQKYRHIQSPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKG-NIPHCCKKDPT 123

Query: 119 IVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTL- 178
           +VDL+PG PY  Q+ANCCKGGV++S  QDPA   ++FQ+++G +       ++P NFTL 
Sbjct: 124 VVDLLPGTPYNQQIANCCKGGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPRNFTLM 183

Query: 179 -GLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 238
              PGYTC     V PTKF     RR TQ + TWN+TC YSQF +  +P CCVSLSSFYN
Sbjct: 184 GPGPGYTCGPAKIVRPTKFVTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYN 243

Query: 239 STIVPCPQCSCGCQG--LEGTKCIE 260
            TIV CP C+CGCQ    E   C++
Sbjct: 244 ETIVGCPTCACGCQNNRTESGACLD 267

[Close]

BLAST of Carg13197 vs. TAIR10
Match: AT3G29810.1 (COBRA-like protein 2 precursor)

HSP 1 Score: 245.7 bits (626), Expect = 3.0e-65
Identity = 108/194 (55.67%), Postives = 139/194 (71.65%), Query Frame = 0


Query: 59  VSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPV 118
           V+++NFQ +RH+E PGW+LGWSW   EVIWSM G +AT+QG+CSK+ G  +PHCC+K P 
Sbjct: 56  VTIFNFQQYRHIEAPGWQLGWSWMKKEVIWSMVGGQATEQGDCSKFKG-NIPHCCKKTPA 115

Query: 119 IVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTLG 178
           IVDL+PG PY  Q++NCC+GGV+S+  QDPA   ++FQ+++G+S       + P N TL 
Sbjct: 116 IVDLLPGTPYNQQISNCCRGGVISAWAQDPATAISSFQISVGQSGTTNTTVRAPRNITLK 175

Query: 179 L--PGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 238
              PGYTC     V P++F     RR TQ L TWN+TC YSQF +  +P CCVSLS+FYN
Sbjct: 176 APGPGYTCGPAKLVKPSRFISADKRRKTQSLLTWNITCTYSQFLARKTPTCCVSLSAFYN 235

Query: 239 STIVPCPQCSCGCQ 251
            TIVPCP CSCGCQ
Sbjct: 236 ETIVPCPTCSCGCQ 248

[Close]

BLAST of Carg13197 vs. TAIR10
Match: AT3G02210.1 (COBRA-like protein 1 precursor)

HSP 1 Score: 245.4 bits (625), Expect = 4.0e-65
Identity = 110/194 (56.70%), Postives = 138/194 (71.13%), Query Frame = 0


Query: 59  VSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPV 118
           V++YNFQ +RH++ PGW LGWSW   EVIW M G + T+QG+CSK+ G  +PHCC+K P 
Sbjct: 61  VTVYNFQQYRHIQAPGWTLGWSWAKREVIWGMNGGQTTEQGDCSKFKG-TIPHCCKKTPS 120

Query: 119 IVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTLG 178
           +VDL+PG+PY  Q+ANCC+GGVL+S  QDPA   +AFQ+ +G++       ++P NFTL 
Sbjct: 121 VVDLLPGSPYNQQIANCCRGGVLNSWAQDPATAVSAFQLTVGQAGTTNKTVRVPKNFTLK 180

Query: 179 L--PGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 238
              PGYTCS    V PT+F     RR TQ L TWNVTC YSQF +  +P CCVSLSSFYN
Sbjct: 181 APGPGYTCSPAKIVKPTRFIGTDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYN 240

Query: 239 STIVPCPQCSCGCQ 251
            TIV CP CSCGC+
Sbjct: 241 KTIVSCPTCSCGCR 253

[Close]

BLAST of Carg13197 vs. TAIR10
Match: AT5G15630.1 (COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family)

HSP 1 Score: 228.8 bits (582), Expect = 3.8e-60
Identity = 103/194 (53.09%), Postives = 130/194 (67.01%), Query Frame = 0


Query: 59  VSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPV 118
           V++ NFQ++RH++ PGW LGW+W   EVIWSM GA+ T+QG+CSK+ G  +PHCC+K P 
Sbjct: 48  VTMNNFQIYRHIQNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKG-NVPHCCKKTPT 107

Query: 119 IVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTL- 178
           +VDL+PG PY  Q +NCCKGGV+ +  QDP+   + FQ++ G +       K+P NFTL 
Sbjct: 108 VVDLLPGVPYNQQFSNCCKGGVIGAWGQDPSAAVSQFQVSAGLAGTTNKTVKLPKNFTLL 167

Query: 179 -GLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 238
              PGYTC     V  T F     RR TQ L TWNVTC YSQF +   P CCVS SSFYN
Sbjct: 168 GPGPGYTCGPAKIVPSTVFLTTDKRRKTQALMTWNVTCTYSQFLARKHPSCCVSFSSFYN 227

Query: 239 STIVPCPQCSCGCQ 251
            TI PCP C+CGC+
Sbjct: 228 DTITPCPSCACGCE 240

[Close]

BLAST of Carg13197 vs. Swiss-Prot
Match: sp|O04500|COBL6_ARATH (COBRA-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=COBL6 PE=2 SV=2)

HSP 1 Score: 263.5 bits (672), Expect = 2.5e-69
Identity = 119/194 (61.34%), Postives = 140/194 (72.16%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGK-ELPHCCEK 116
           V+V+L N Q +RHVE PGWKL W W   EVIW M GAE T+QGNCS +     LPHCC +
Sbjct: 61  VQVTLENMQEYRHVEKPGWKLSWHWLNQEVIWDMKGAETTEQGNCSAFASSGNLPHCCLE 120

Query: 117 KPVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANF 176
           +P IVDL+PGA   +QVANCC+GGVL+SM QD AN+ +AF M +G S     +  MP+NF
Sbjct: 121 RPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHANHVSAFHMTVGSSPDGPEEFNMPSNF 180

Query: 177 TLGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFY 236
            +G+PGY+C +   VSPTKFS D GRR TQ L TW   CVYSQFRSSPSP CCVSLS+FY
Sbjct: 181 DIGVPGYSCDNATSVSPTKFSTDKGRRKTQALATWEAVCVYSQFRSSPSPKCCVSLSAFY 240

Query: 237 NSTIVPCPQCSCGC 250
              IVPCP CSCGC
Sbjct: 241 YQNIVPCPTCSCGC 254

[Close]

BLAST of Carg13197 vs. Swiss-Prot
Match: sp|Q6Z4G8|COBL1_ORYSJ (COBRA-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L6 PE=2 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.4e-67
Identity = 116/203 (57.14%), Postives = 143/203 (70.44%), Query Frame = 0


Query: 59  VSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPV 118
           VSLYN+Q +RH++ PGWKLGW W   E+IW+M G +AT+QG+CSK+    +PHCC+K P 
Sbjct: 56  VSLYNYQQYRHIQSPGWKLGWVWAKKEIIWAMNGGQATEQGDCSKF-KSNIPHCCKKDPE 115

Query: 119 IVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTLG 178
           IVDL+PG PY +Q+ANCCKGGVL+S  QDPAN  A+FQ+++G++       ++P NFTL 
Sbjct: 116 IVDLLPGTPYNMQIANCCKGGVLNSWAQDPANAIASFQVSVGQAGTTNKTVRVPRNFTLK 175

Query: 179 L--PGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 238
              PGYTC     V PTKF    GRR TQ   TWNVTC YSQ  +  SP CCVSLSSFYN
Sbjct: 176 SPGPGYTCGSAKVVRPTKFFSQDGRRTTQAHMTWNVTCTYSQIVAQRSPTCCVSLSSFYN 235

Query: 239 STIVPCPQCSCGCQGLEGTKCIE 260
            TIV CP CSCGCQ  +   C+E
Sbjct: 236 DTIVNCPTCSCGCQNNKPGSCVE 257

[Close]

BLAST of Carg13197 vs. Swiss-Prot
Match: sp|Q60E70|COBL3_ORYSJ (COBRA-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L4 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.5e-66
Identity = 110/194 (56.70%), Postives = 140/194 (72.16%), Query Frame = 0


Query: 59  VSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPV 118
           V+++N+Q FRH++ PGW+LGW+W   EVIWSM GA+ T+QG+CSK+ G   PHCC+K P 
Sbjct: 64  VTMFNYQQFRHIQAPGWQLGWTWAKKEVIWSMVGAQTTEQGDCSKFKG-GTPHCCKKDPT 123

Query: 119 IVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTLG 178
           +VDL+PG PY +Q+ANCCK GV+++  QDP+N  ++FQ+++G +       K+P NFTL 
Sbjct: 124 VVDLLPGTPYNMQIANCCKAGVINTFNQDPSNAASSFQISVGLAGTTNKTVKLPKNFTLK 183

Query: 179 L--PGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 238
              PGYTC     V PTKF    GRR TQ L TWNVTC YSQF +  +P CCVSLSSFYN
Sbjct: 184 APGPGYTCGRAMIVRPTKFFTGDGRRATQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYN 243

Query: 239 STIVPCPQCSCGCQ 251
            TIV CP CSCGCQ
Sbjct: 244 DTIVNCPTCSCGCQ 256

[Close]

BLAST of Carg13197 vs. Swiss-Prot
Match: sp|Q94KT8|COBRA_ARATH (Protein COBRA OS=Arabidopsis thaliana OX=3702 GN=COB PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.2e-64
Identity = 110/205 (53.66%), Postives = 141/205 (68.78%), Query Frame = 0


Query: 59  VSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPV 118
           V+++NFQ +RH++ PGW LGW W   EVIWSM GA+ T+QG+CSKY G  +PHCC+K P 
Sbjct: 64  VTMFNFQKYRHIQSPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKG-NIPHCCKKDPT 123

Query: 119 IVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTL- 178
           +VDL+PG PY  Q+ANCCKGGV++S  QDPA   ++FQ+++G +       ++P NFTL 
Sbjct: 124 VVDLLPGTPYNQQIANCCKGGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPRNFTLM 183

Query: 179 -GLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 238
              PGYTC     V PTKF     RR TQ + TWN+TC YSQF +  +P CCVSLSSFYN
Sbjct: 184 GPGPGYTCGPAKIVRPTKFVTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYN 243

Query: 239 STIVPCPQCSCGCQG--LEGTKCIE 260
            TIV CP C+CGCQ    E   C++
Sbjct: 244 ETIVGCPTCACGCQNNRTESGACLD 267

[Close]

BLAST of Carg13197 vs. Swiss-Prot
Match: sp|Q8L8Q7|COBL2_ARATH (COBRA-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=COBL2 PE=2 SV=2)

HSP 1 Score: 245.7 bits (626), Expect = 5.5e-64
Identity = 108/194 (55.67%), Postives = 139/194 (71.65%), Query Frame = 0


Query: 59  VSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKKPV 118
           V+++NFQ +RH+E PGW+LGWSW   EVIWSM G +AT+QG+CSK+ G  +PHCC+K P 
Sbjct: 56  VTIFNFQQYRHIEAPGWQLGWSWMKKEVIWSMVGGQATEQGDCSKFKG-NIPHCCKKTPA 115

Query: 119 IVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFTLG 178
           IVDL+PG PY  Q++NCC+GGV+S+  QDPA   ++FQ+++G+S       + P N TL 
Sbjct: 116 IVDLLPGTPYNQQISNCCRGGVISAWAQDPATAISSFQISVGQSGTTNTTVRAPRNITLK 175

Query: 179 L--PGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 238
              PGYTC     V P++F     RR TQ L TWN+TC YSQF +  +P CCVSLS+FYN
Sbjct: 176 APGPGYTCGPAKLVKPSRFISADKRRKTQSLLTWNITCTYSQFLARKTPTCCVSLSAFYN 235

Query: 239 STIVPCPQCSCGCQ 251
            TIVPCP CSCGCQ
Sbjct: 236 ETIVPCPTCSCGCQ 248

[Close]

BLAST of Carg13197 vs. TrEMBL
Match: tr|A0A1S3C1W1|A0A1S3C1W1_CUCME (COBRA-like protein OS=Cucumis melo OX=3656 GN=LOC103496092 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 9.6e-114
Identity = 184/203 (90.64%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           VRVSLYNFQLFRHVELPGWKLGWSWKG+EVIW MWGAE TQQGNCSKY+G+ELPHCCEKK
Sbjct: 98  VRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWGMWGAETTQQGNCSKYVGRELPHCCEKK 157

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 176
           P IVDLMPGAPYKLQVANCCK GVLSSMRQ+P+NYGAAFQMN+GKS+GK VDSKMPANFT
Sbjct: 158 PEIVDLMPGAPYKLQVANCCKAGVLSSMRQEPSNYGAAFQMNVGKSSGKDVDSKMPANFT 217

Query: 177 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 236
           LGLPGYTCS+PFQV PTKFSKDGGRRW QVLETWNVTCVYSQFRSSP+PGCCVSLSSFYN
Sbjct: 218 LGLPGYTCSEPFQVPPTKFSKDGGRRWMQVLETWNVTCVYSQFRSSPTPGCCVSLSSFYN 277

Query: 237 STIVPCPQCSCGCQGLEGTKCIE 260
           STIVPCPQCSCGCQGL+GTKC++
Sbjct: 278 STIVPCPQCSCGCQGLKGTKCVK 300

[Close]

BLAST of Carg13197 vs. TrEMBL
Match: tr|A0A0A0L6L8|A0A0A0L6L8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G225840 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 3.3e-90
Identity = 151/170 (88.82%), Postives = 162/170 (95.29%), Query Frame = 0


Query: 90  MWGAEATQQGNCSKYIGKELPHCCEKKPVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPA 149
           MWGAE TQQGNCSKY+G+ELPHCCEKKP IVDLMPGAPYKLQVANCCK GVLSSMRQ+ +
Sbjct: 1   MWGAETTQQGNCSKYVGRELPHCCEKKPEIVDLMPGAPYKLQVANCCKAGVLSSMRQESS 60

Query: 150 NYGAAFQMNIGKSAGKGVDSKMPANFTLGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLET 209
           N GAAFQMN+GKS+GK VDSKMPANFTLGLPGYTCS+PFQV PTKFSKDGGRRW QVLET
Sbjct: 61  NSGAAFQMNVGKSSGKDVDSKMPANFTLGLPGYTCSEPFQVPPTKFSKDGGRRWMQVLET 120

Query: 210 WNVTCVYSQFRSSPSPGCCVSLSSFYNSTIVPCPQCSCGCQGLEGTKCIE 260
           WNVTCVYSQFRSSP+PGCCVSLSSFYNSTIVPCPQCSCGCQGL+GTKC++
Sbjct: 121 WNVTCVYSQFRSSPTPGCCVSLSSFYNSTIVPCPQCSCGCQGLKGTKCVK 170

[Close]

BLAST of Carg13197 vs. TrEMBL
Match: tr|A0A2I4FV71|A0A2I4FV71_9ROSI (COBRA-like protein OS=Juglans regia OX=51240 GN=LOC109002315 PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 6.9e-88
Identity = 150/206 (72.82%), Postives = 169/206 (82.04%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           +RVSLYNFQLFRHVE PGWKL W+WKGDE IW MWGAEATQQGNCS++ G+ LPHCCEK+
Sbjct: 47  LRVSLYNFQLFRHVERPGWKLSWTWKGDEAIWDMWGAEATQQGNCSRFRGQFLPHCCEKQ 106

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGK-SAG--KGVDSKMPA 176
           PVIVDLMPGA Y  Q + CCK G+LSSM QDP+   AAF+MN+ K SAG   G  S MP 
Sbjct: 107 PVIVDLMPGARYNKQFSKCCKEGLLSSMTQDPSMSVAAFRMNVNKASAGNISGDSSFMPM 166

Query: 177 NFTLGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSS 236
           NF LGLPGYTC  PFQV PT F +DG RRWTQ LETWNVTC+YSQF++SP+P CCVSLS+
Sbjct: 167 NFNLGLPGYTCGVPFQVPPTMFKEDGSRRWTQALETWNVTCIYSQFQASPAPKCCVSLSA 226

Query: 237 FYNSTIVPCPQCSCGCQGLEGTKCIE 260
           FYNSTIVPCPQCSC CQGL G KC++
Sbjct: 227 FYNSTIVPCPQCSCNCQGLAGGKCVK 252

[Close]

BLAST of Carg13197 vs. TrEMBL
Match: tr|A0A2I4GDQ4|A0A2I4GDQ4_9ROSI (COBRA-like protein OS=Juglans regia OX=51240 GN=LOC109007001 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 5.8e-87
Identity = 144/204 (70.59%), Postives = 166/204 (81.37%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           VRVS+YNFQLFRHVE PGWKL W+W+GDE IW MWGAEATQQGNCS++ G+ LPHCCEK+
Sbjct: 73  VRVSIYNFQLFRHVERPGWKLSWTWRGDEAIWDMWGAEATQQGNCSRFRGQVLPHCCEKR 132

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGK-SAGKGVDSKMPANF 176
           P IVDL+PGA Y  Q ANCCKGGVL+SM QDP  Y A F+MN+ K S+G      MP NF
Sbjct: 133 PEIVDLIPGAAYNKQFANCCKGGVLTSMTQDPTMYFATFRMNVNKPSSGNNAGYFMPLNF 192

Query: 177 TLGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFY 236
            LGLPGYTC + FQV PT+F +DG RR TQ LETWNVTC+YSQFR+SP+P CCVSLS+FY
Sbjct: 193 NLGLPGYTCGEAFQVPPTRFREDGSRRRTQALETWNVTCIYSQFRASPTPKCCVSLSAFY 252

Query: 237 NSTIVPCPQCSCGCQGLEGTKCIE 260
           NSTIVPCPQCSC C+ L G KC++
Sbjct: 253 NSTIVPCPQCSCACEELAGAKCVK 276

[Close]

BLAST of Carg13197 vs. TrEMBL
Match: tr|A0A0B0PH80|A0A0B0PH80_GOSAR (COBRA-like protein 6 OS=Gossypium arboreum OX=29729 GN=F383_32677 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.0e-86
Identity = 141/202 (69.80%), Postives = 167/202 (82.67%), Query Frame = 0


Query: 57  VRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWSMWGAEATQQGNCSKYIGKELPHCCEKK 116
           V+VSL NFQL+RH+ELPGWKLGW W G EVIWS+ GAEAT+QGNCS++ G +LPHCCEKK
Sbjct: 31  VKVSLLNFQLYRHIELPGWKLGWEWLGKEVIWSIQGAEATEQGNCSRFKGGQLPHCCEKK 90

Query: 117 PVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPANYGAAFQMNIGKSAGKGVDSKMPANFT 176
           P+IVDL+PGAPY +Q +NCCKGGVLSSM QDP  Y A FQMNIG       D  MP NF+
Sbjct: 91  PLIVDLLPGAPYNIQTSNCCKGGVLSSMIQDPTKYAAVFQMNIGAGGVADSDFDMPQNFS 150

Query: 177 LGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPGCCVSLSSFYN 236
           LG+PGYTC+ P QV+P+K+S DGGRRWTQ L TWNVTC+YSQ+++S SP CCVSLS+FYN
Sbjct: 151 LGVPGYTCAKPVQVAPSKYSSDGGRRWTQALGTWNVTCIYSQYQASTSPKCCVSLSAFYN 210

Query: 237 STIVPCPQCSCGCQGLEGTKCI 259
            +IV CP+CSC CQGL G+KCI
Sbjct: 211 DSIVHCPKCSCSCQGLSGSKCI 232

The following BLAST results are available for this feature:

BLAST of Carg13197 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942251.1	5.5e-121	98.03	COBRA-like protein 6 [Cucurbita moschata]	[more]
XP_023533604.1	1.2e-120	97.54	COBRA-like protein 6 [Cucurbita pepo subsp. pepo]	[more]
XP_022980772.1	2.7e-120	98.03	COBRA-like protein 6 [Cucurbita maxima]	[more]
XP_022136486.1	4.5e-115	91.63	COBRA-like protein 6 [Momordica charantia]	[more]
XP_008456042.2	1.4e-113	90.64	PREDICTED: COBRA-like protein 6, partial [Cucumis melo]	[more]

BLAST of Carg13197 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09790.1	1.4e-70	61.34	COBRA-like protein 6 precursor	[more]
AT5G60920.1	2.3e-65	53.66	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family	[more]
AT3G29810.1	3.0e-65	55.67	COBRA-like protein 2 precursor	[more]
AT3G02210.1	4.0e-65	56.70	COBRA-like protein 1 precursor	[more]
AT5G15630.1	3.8e-60	53.09	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family	[more]

BLAST of Carg13197 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O04500\|COBL6_ARATH	2.5e-69	61.34	COBRA-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=COBL6 PE=2 SV=2	[more]
sp\|Q6Z4G8\|COBL1_ORYSJ	2.4e-67	57.14	COBRA-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L6 PE=2 SV=1	[more]
sp\|Q60E70\|COBL3_ORYSJ	4.5e-66	56.70	COBRA-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L4 PE=2 SV=1	[more]
sp\|Q94KT8\|COBRA_ARATH	4.2e-64	53.66	Protein COBRA OS=Arabidopsis thaliana OX=3702 GN=COB PE=2 SV=1	[more]
sp\|Q8L8Q7\|COBL2_ARATH	5.5e-64	55.67	COBRA-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=COBL2 PE=2 SV=2	[more]

BLAST of Carg13197 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C1W1\|A0A1S3C1W1_CUCME	9.6e-114	90.64	COBRA-like protein OS=Cucumis melo OX=3656 GN=LOC103496092 PE=3 SV=1	[more]
tr\|A0A0A0L6L8\|A0A0A0L6L8_CUCSA	3.3e-90	88.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G225840 PE=4 SV=1	[more]
tr\|A0A2I4FV71\|A0A2I4FV71_9ROSI	6.9e-88	72.82	COBRA-like protein OS=Juglans regia OX=51240 GN=LOC109002315 PE=3 SV=1	[more]
tr\|A0A2I4GDQ4\|A0A2I4GDQ4_9ROSI	5.8e-87	70.59	COBRA-like protein OS=Juglans regia OX=51240 GN=LOC109007001 PE=3 SV=1	[more]
tr\|A0A0B0PH80\|A0A0B0PH80_GOSAR	1.0e-86	69.80	COBRA-like protein 6 OS=Gossypium arboreum OX=29729 GN=F383_32677 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0010215	cellulose microfibril organization
GO:0016049	cell growth

Vocabulary: **Cellular Component**
Term	Definition
GO:0031225	anchored component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR006918	COBRA_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016049	cell growth
biological_process	GO:0010215	cellulose microfibril organization
cellular_component	GO:0031225	anchored component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13197-RA	Carg13197-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006918	COBRA, plant	PFAM	PF04833	COBRA	coord: 57..217 e-value: 9.8E-61 score: 204.4
IPR006918	COBRA, plant	PANTHER	PTHR31673	FAMILY NOT NAMED	coord: 56..258
IPR006918	COBRA, plant	PRODOM	PD140986		coord: 57..216 e-value: 2.0E-50 score: 504.0
None	No IPR available	PANTHER	PTHR31673:SF12	COBRA-LIKE PROTEIN 6	coord: 56..258

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13197	Lsi05G001550	Bottle gourd (USVL1VR-Ls)	carlsiB039
Carg13197	Cla97C05G091790	Watermelon (97103) v2	carwmbB0042
Carg13197	Bhi01G001185	Wax gourd	carwgoB0050

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg13197	Silver-seed gourd	carcarB051
Carg13197	Cucumber (Gy14) v2	carcgybB0043
Carg13197	Cucumber (Gy14) v1	carcgyB0048
Carg13197	Cucurbita maxima (Rimu)	carcmaB0053
Carg13197	Cucurbita maxima (Rimu)	carcmaB0055
Carg13197	Cucurbita moschata (Rifu)	carcmoB0055
Carg13197	Cucurbita moschata (Rifu)	carcmoB0058
Carg13197	Cucurbita pepo (Zucchini)	carcpeB0059
Carg13197	Cucurbita pepo (Zucchini)	carcpeB0061
Carg13197	Wild cucumber (PI 183967)	carcpiB0047
Carg13197	Cucumber (Chinese Long) v2	carcuB0043
Carg13197	Cucumber (Chinese Long) v3	carcucB0048
Carg13197	Melon (DHL92) v3.5.1	carmeB0041
Carg13197	Melon (DHL92) v3.6.1	carmedB0042
Carg13197	Watermelon (Charleston Gray)	carwcgB0045
Carg13197	Watermelon (97103) v1	carwmB0048