Lsi05G001330 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G001330
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Serine/arginine repetitive matrix protein 2, putative
Location	chr05 : 1978215 .. 1981137 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATCAAAAGACAGCGCATGTTACATAATCTCACATGGCCTTCTCCTCTTCTGCTCATCCTAATCATATAATGGCATTTTCAGAAGAAATCTTGATGGCCACTCCATTTCCCAGGTACCCATTTCCTCTAAAACTCTCACTTTCTTTCCTTTTGGTCAAACTTTGTAGTGCCCACCATCCATGGACCCAATCAATGTCTCTCTTCATCATTCTTCTCCTTCAAGCGATGAGCCGCTCATTGATGAAGCTTTGGATCTTTTAGAGCTTTTTTGGTTCTTTGATAATCTGCTTGTTAGGAGGAACCCCAGGATGTTGATCTCCCGTTCTGATCCTTGTCTTTCTAAAGTTGCCCACCAGGTGTTTGTTGAAACTCCTACTACTAATCTCTGCTCATCTGCTTTGGATGGAGGTGTTTCGCTGGGGAATGGTGGTGGTATACGTCGGAATCTGCTTCGAACACCGTCGTTACCGTCCCGTATGGATCGAGGAGAAGGAATTCGAGAGAAAGGAAATGGTTCTAGGCCATTGGTGGAGCATGGTGTGCTTGTTGAAACTCCTGTTGATAATGTTAGCTCATCTGCTTTGGATGTGGATGCTTCGATTGGAAATGGTGGTGGTAAATGTAGGAATCTCCTCCGAACACCGTCGTTACCGTCCCGTGTAGACCGAGAAGAAGGAATTCAAGAGAAAGGAAATGATTCTAGGCCATTATCTGAGCATGGCGTGTTTGCAGAACGTCCTGCTGATAATGCCTGCTTATCTACTTTGGATATGGATGTTTCGTTGGGAAATAGTGGCGTTAAACATCGGAGTCTGCTCCGAATGCCATCGTTACCATCCCGTGTGGAACAAGAACAAGGTATTCGAGAGAAAGGGAATGGTTCCAAGCCATTAATAGAGCATGGTTTGCTTCAAAAACCAGCTAAGCCACCTTATGTAGAGAGGAAAGAAGAAGGAACTTGCAGCAAAGAAAGTGGCAGCACTCGGAGGAGCAAATCGGCGAGGAAACCACGGCATGGTAATCTGCTAAGAACACCATCTTTGCCACCATGTATAGGGAGGGAAAAGGAATTTGGAGAAAAGGAAGCTGCTGCTAGAATCAGAAACTCTATTCAACCAAACCTTTCTGAATTCTTTCCCACAAGACAAGAGGTATTGCAAAAATATTGTTCTGTTTCAACTGTCTCGTAACCTTCTTCATGTGTGCTTGAATGATATTCGAGCTCGCTTATGGTTAAGAGTAAACATATCAAATTTTTGTTGAATAGCTATTATGTCAGAATATAATGAAAAGATTAAATTAGCTCGAAGATAGTTTAGTATAGTATCATAACAAGAAGTCTTAAATTCAAACATTTGCAATGAATCCATATGTTGAGCTGTATGCTAATTGTTCGAGTCTTGATGTGATTGTGAAAAGATGACATTCATGGTGGCCCGGTGATAAGGCTTGGGCTGCTGAAAGCGACCCTTCAAAGTCCTAGATTCAAGTTGAAATGTAAATACTTAAAACCTTCATTATCACCTGAAGTTGGTGTTAAATAATGGAAGTTTCTCGAAAATTATTAAGATAGAACATGAGCAAAATGTAAGGAGTGGAACCTTCGGTATTCCACTTATAAAAAAGAACTGGTTTTACTTAATAGCTTATAATTGTTGGTTCAAATGTGCATAGCCATTTAGCAAGTTAGTAACACTCATTTGGATTCTTGTGTGAAGAAACTACAGAACACAACACCTTTTAAAAGGATAGAACGACTAGAATAAACTTCATCTGTTCTTTGCTTCTTTGAATAACATTTGGTTTGCTCATCATTCACAGATTCTTGAAAAGAACTTCAGCCTCCCGATGTGTCGAATCCCAACAAGCAGTGATGAAATTTGGCACCAATTTCTCATCCAAATGAGGAAGAGAAGAAGCCAAAGTGAACTTGAATCAGAAGAACTGCAAGGTTTCAAGGACTTAGGATTCACATTTGACAAAAAAGATATAAACCCAACAGTGGTTGACATAATCCCAGGCTTGAGAGAGAAAAAAGAGGAAGAGTTGGAGAGTGAAAGAACTAGAAGGCCTTATCTTTCTGAGGCTTGGGTGCTCCAAACTCATCTCCCTCCTCCAATTCCAAAATGGGACACTAGAAAATCTGCAGAAGACATGAAACAACAAATCAAGTTTTGGGCTAGAGCTGTTGCTTCTAATGTGCACTAAAATTAGTGAGGGCTTATAAACATACCATATTATGGGAAATTTGCATAGATTGCCCCATTTTCAAAAAAAGAAAAAGAAAAACAGCTATTTTTGTAATATTTCATCTGTAACTAATAAGCTAATTTTGGCATTGCAGCTACCCAAGACTGAATGGAATTGGATTGGAGTCCAAATGAACCTCACTTTATTGGAGAAAGTATAGAAAGTACAGTAAAAAAGTGAGGGGCAGACATTTGAATGAGCTTTGAGAAGTACAAAATATAGAACTTTTGTCACTTTTCACCACCAAACAAAGAGAAAAATGCCCTCATTCTCTATTTGAACCTACAAAAAGCTTGCTTCAAAATTTGAGCAGCTTGTTGCATTGGAGACTGGGCCATTGATCCTCTGCTATTCATCAAAAGGGAAAAGTGAGAATTGAAATGTGACAGCTGGAACTAAGGTCAAATGTATTTGGTACATGAGAATAAGATTAGCAAAATGAGAGTTATTTATTTATTATATAAAATTTTATTTTAGGGTTATTTTTTTCATAAGATAATTAATCATATAAAGTTCAACTAATTTTTTTTTCTTTGGATAAGTATATTTTAAATTCTCTAGTTTTTAGAATTAGTTTTATTTAGTCATTAAATTTCAAAATTATTATTTCCAAAATGCTTTAAAATAGGTCTTGATTTTGACTCTTGTTTAGTTAGAGAAAAACAACACTGC

mRNA sequence

AGATCAAAAGACAGCGCATGTTACATAATCTCACATGGCCTTCTCCTCTTCTGCTCATCCTAATCATATAATGGCATTTTCAGAAGAAATCTTGATGGCCACTCCATTTCCCAGGTACCCATTTCCTCTAAAACTCTCACTTTCTTTCCTTTTGGTCAAACTTTGTAGTGCCCACCATCCATGGACCCAATCAATGTCTCTCTTCATCATTCTTCTCCTTCAAGCGATGAGCCGCTCATTGATGAAGCTTTGGATCTTTTAGAGCTTTTTTGGTTCTTTGATAATCTGCTTGTTAGGAGGAACCCCAGGATGTTGATCTCCCGTTCTGATCCTTGTCTTTCTAAAGTTGCCCACCAGGTGTTTGTTGAAACTCCTACTACTAATCTCTGCTCATCTGCTTTGGATGGAGGTGTTTCGCTGGGGAATGGTGGTGGTATACGTCGGAATCTGCTTCGAACACCGTCGTTACCGTCCCGTATGGATCGAGGAGAAGGAATTCGAGAGAAAGGAAATGGTTCTAGGCCATTGGTGGAGCATGGTGTGCTTGTTGAAACTCCTGTTGATAATGTTAGCTCATCTGCTTTGGATGTGGATGCTTCGATTGGAAATGGTGGTGGTAAATGTAGGAATCTCCTCCGAACACCGTCGTTACCGTCCCGTGTAGACCGAGAAGAAGGAATTCAAGAGAAAGGAAATGATTCTAGGCCATTATCTGAGCATGGCGTGTTTGCAGAACGTCCTGCTGATAATGCCTGCTTATCTACTTTGGATATGGATGTTTCGTTGGGAAATAGTGGCGTTAAACATCGGAGTCTGCTCCGAATGCCATCGTTACCATCCCGTGTGGAACAAGAACAAGGTATTCGAGAGAAAGGGAATGGTTCCAAGCCATTAATAGAGCATGGTTTGCTTCAAAAACCAGCTAAGCCACCTTATGTAGAGAGGAAAGAAGAAGGAACTTGCAGCAAAGAAAGTGGCAGCACTCGGAGGAGCAAATCGGCGAGGAAACCACGGCATGGTAATCTGCTAAGAACACCATCTTTGCCACCATGTATAGGGAGGGAAAAGGAATTTGGAGAAAAGGAAGCTGCTGCTAGAATCAGAAACTCTATTCAACCAAACCTTTCTGAATTCTTTCCCACAAGACAAGAGATTCTTGAAAAGAACTTCAGCCTCCCGATGTGTCGAATCCCAACAAGCAGTGATGAAATTTGGCACCAATTTCTCATCCAAATGAGGAAGAGAAGAAGCCAAAGTGAACTTGAATCAGAAGAACTGCAAGGTTTCAAGGACTTAGGATTCACATTTGACAAAAAAGATATAAACCCAACAGTGGTTGACATAATCCCAGGCTTGAGAGAGAAAAAAGAGGAAGAGTTGGAGAGTGAAAGAACTAGAAGGCCTTATCTTTCTGAGGCTTGGGTGCTCCAAACTCATCTCCCTCCTCCAATTCCAAAATGGGACACTAGAAAATCTGCAGAAGACATGAAACAACAAATCAAGTTTTGGGCTAGAGCTGTTGCTTCTAATGTGCACTAAAATTAGTGAGGGCTTATAAACATACCATATTATGGGAAATTTGCATAGATTGCCCCATTTTCAAAAAAAGAAAAAGAAAAACAGCTATTTTTGTAATATTTCATCTGTAACTAATAAGCTAATTTTGGCATTGCAGCTACCCAAGACTGAATGGAATTGGATTGGAGTCCAAATGAACCTCACTTTATTGGAGAAAGTATAGAAAGTACAGTAAAAAAGTGAGGGGCAGACATTTGAATGAGCTTTGAGAAGTACAAAATATAGAACTTTTGTCACTTTTCACCACCAAACAAAGAGAAAAATGCCCTCATTCTCTATTTGAACCTACAAAAAGCTTGCTTCAAAATTTGAGCAGCTTGTTGCATTGGAGACTGGGCCATTGATCCTCTGCTATTCATCAAAAGGGAAAAGTGAGAATTGAAATGTGACAGCTGGAACTAAGGTCAAATGTATTTGGTACATGAGAATAAGATTAGCAAAATGAGAGTTATTTATTTATTATATAAAATTTTATTTTAGGGTTATTTTTTTCATAAGATAATTAATCATATAAAGTTCAACTAATTTTTTTTTCTTTGGATAAGTATATTTTAAATTCTCTAGTTTTTAGAATTAGTTTTATTTAGTCATTAAATTTCAAAATTATTATTTCCAAAATGCTTTAAAATAGGTCTTGATTTTGACTCTTGTTTAGTTAGAGAAAAACAACACTGC

Coding sequence (CDS)

ATGGACCCAATCAATGTCTCTCTTCATCATTCTTCTCCTTCAAGCGATGAGCCGCTCATTGATGAAGCTTTGGATCTTTTAGAGCTTTTTTGGTTCTTTGATAATCTGCTTGTTAGGAGGAACCCCAGGATGTTGATCTCCCGTTCTGATCCTTGTCTTTCTAAAGTTGCCCACCAGGTGTTTGTTGAAACTCCTACTACTAATCTCTGCTCATCTGCTTTGGATGGAGGTGTTTCGCTGGGGAATGGTGGTGGTATACGTCGGAATCTGCTTCGAACACCGTCGTTACCGTCCCGTATGGATCGAGGAGAAGGAATTCGAGAGAAAGGAAATGGTTCTAGGCCATTGGTGGAGCATGGTGTGCTTGTTGAAACTCCTGTTGATAATGTTAGCTCATCTGCTTTGGATGTGGATGCTTCGATTGGAAATGGTGGTGGTAAATGTAGGAATCTCCTCCGAACACCGTCGTTACCGTCCCGTGTAGACCGAGAAGAAGGAATTCAAGAGAAAGGAAATGATTCTAGGCCATTATCTGAGCATGGCGTGTTTGCAGAACGTCCTGCTGATAATGCCTGCTTATCTACTTTGGATATGGATGTTTCGTTGGGAAATAGTGGCGTTAAACATCGGAGTCTGCTCCGAATGCCATCGTTACCATCCCGTGTGGAACAAGAACAAGGTATTCGAGAGAAAGGGAATGGTTCCAAGCCATTAATAGAGCATGGTTTGCTTCAAAAACCAGCTAAGCCACCTTATGTAGAGAGGAAAGAAGAAGGAACTTGCAGCAAAGAAAGTGGCAGCACTCGGAGGAGCAAATCGGCGAGGAAACCACGGCATGGTAATCTGCTAAGAACACCATCTTTGCCACCATGTATAGGGAGGGAAAAGGAATTTGGAGAAAAGGAAGCTGCTGCTAGAATCAGAAACTCTATTCAACCAAACCTTTCTGAATTCTTTCCCACAAGACAAGAGATTCTTGAAAAGAACTTCAGCCTCCCGATGTGTCGAATCCCAACAAGCAGTGATGAAATTTGGCACCAATTTCTCATCCAAATGAGGAAGAGAAGAAGCCAAAGTGAACTTGAATCAGAAGAACTGCAAGGTTTCAAGGACTTAGGATTCACATTTGACAAAAAAGATATAAACCCAACAGTGGTTGACATAATCCCAGGCTTGAGAGAGAAAAAAGAGGAAGAGTTGGAGAGTGAAAGAACTAGAAGGCCTTATCTTTCTGAGGCTTGGGTGCTCCAAACTCATCTCCCTCCTCCAATTCCAAAATGGGACACTAGAAAATCTGCAGAAGACATGAAACAACAAATCAAGTTTTGGGCTAGAGCTGTTGCTTCTAATGTGCACTAA

Protein sequence

MDPINVSLHHSSPSSDEPLIDEALDLLELFWFFDNLLVRRNPRMLISRSDPCLSKVAHQVFVETPTTNLCSSALDGGVSLGNGGGIRRNLLRTPSLPSRMDRGEGIREKGNGSRPLVEHGVLVETPVDNVSSSALDVDASIGNGGGKCRNLLRTPSLPSRVDREEGIQEKGNDSRPLSEHGVFAERPADNACLSTLDMDVSLGNSGVKHRSLLRMPSLPSRVEQEQGIREKGNGSKPLIEHGLLQKPAKPPYVERKEEGTCSKESGSTRRSKSARKPRHGNLLRTPSLPPCIGREKEFGEKEAAARIRNSIQPNLSEFFPTRQEILEKNFSLPMCRIPTSSDEIWHQFLIQMRKRRSQSELESEELQGFKDLGFTFDKKDINPTVVDIIPGLREKKEEELESERTRRPYLSEAWVLQTHLPPPIPKWDTRKSAEDMKQQIKFWARAVASNVH

Homology

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BLAST of Lsi05G001330 vs. TrEMBL
Match: A0A0A0LC64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G236040 PE=4 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 2.9e-205
Identity = 376/453 (83.00%), Postives = 395/453 (87.20%), Query Frame = 1


Query: 1   MDPINVSLHHSSPSSDEPLIDEALDLLELFWFFDNLLVRRNPRMLISRSDPCLSKVAHQV 60
           MDPIN SLH SSPS+DE     ALDLLELFWFFDNLL+RRNP+MLISRSDPCLSK+ HQV
Sbjct: 49  MDPINPSLHQSSPSTDE-----ALDLLELFWFFDNLLLRRNPKMLISRSDPCLSKLPHQV 108

Query: 61  FVETPTTNLCSSALDGGVSL-GNGGGIRRNLLRTPSLPSRMDRGEGIREKGNGSRPLVEH 120
           FVETP TNLCSS LD  +SL  NGG +RRNLLRTPSLPSRM RG+GI E+ N SRPL+EH
Sbjct: 109 FVETPPTNLCSSPLDAALSLHNNGGAVRRNLLRTPSLPSRMYRGQGIPEERNDSRPLLEH 168

Query: 121 GVLVETPVDNVSSSALDVDASIGNGGGKCRNLLRTPSLPSRVDREEGIQEKGNDSRPLSE 180
            VLVETPV NV SS+LD+D S  N       LLRTPSLP RVD+EEG     N S PLSE
Sbjct: 169 CVLVETPVHNVCSSSLDMDVSTAN-------LLRTPSLPPRVDQEEG-----NGSGPLSE 228

Query: 181 HGVFAERPADNACLSTLDMDVSLGNSGVKHRSLLRMPSLPSRVEQEQGIREKGNGSKPLI 240
           HGVFAE PAD+ACLSTLDM  S GNSG K RSL RMPSLPSRVE+EQGI+EKGNGSKPLI
Sbjct: 229 HGVFAEPPADHACLSTLDMPFSPGNSGDKRRSLRRMPSLPSRVEREQGIQEKGNGSKPLI 288

Query: 241 EHGLLQKPAKPPYVERKEEGTCSKESGSTRRSKSARKPRHGNLLRTPSLPPCIGREKEFG 300
           EH LLQKPAKPP VERKEEG  SKESGSTRRSKSARKP   NLLRTPSLPPCIGRE+EFG
Sbjct: 289 EHALLQKPAKPPSVERKEEGIRSKESGSTRRSKSARKPPQSNLLRTPSLPPCIGREREFG 348

Query: 301 EKEAAARIRNSIQPNLSEFFPTRQEILEKNFSLPMCRIPTSSDEIWHQFLIQMRKRRSQS 360
           E+EAAARIRNSIQPNLSEFFPTRQE LEK FSLPMCRIPTSSDE+WHQFLIQMRKRRSQS
Sbjct: 349 EREAAARIRNSIQPNLSEFFPTRQEFLEKKFSLPMCRIPTSSDEMWHQFLIQMRKRRSQS 408

Query: 361 ELESEELQGFKDLGFTFDKKDINPTVVDIIPGLREKKEEELESERTRRPYLSEAWVLQTH 420
           ELESEELQGFKDLGFTFDKKDINPTVVDIIPGLREKKEEELESERTRRPYLSEAW+LQTH
Sbjct: 409 ELESEELQGFKDLGFTFDKKDINPTVVDIIPGLREKKEEELESERTRRPYLSEAWMLQTH 468

Query: 421 LPPPIPKWDTRKSAEDMKQQIKFWARAVASNVH 453
           L PPIPKWD RKSAEDMKQQIKFWARAVASNVH
Sbjct: 469 LLPPIPKWDNRKSAEDMKQQIKFWARAVASNVH 484

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BLAST of Lsi05G001330 vs. TrEMBL
Match: M5WZM9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014990mg PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.3e-43
Identity = 121/271 (44.65%), Postives = 162/271 (59.78%), Query Frame = 1


Query: 194 STLDMDVSLGNSGVKHRSLLRMPSLPSRV--EQEQGIREKGNGS--------KPLIEHGL 253
           S L    +   +G    +L+R PSLP  +   QE+ ++ K +GS        +      +
Sbjct: 71  SLLTTSKATQGNGFAGPNLVRTPSLPLHIGRRQEEEVQVKQSGSNKSSSKLTRQTSHQKM 130

Query: 254 LQKPAKPPYVERKEEGTCSKESGSTRRSKSARKPRHGNLLRTPSLPPCIGREKEFGEKEA 313
           LQ P K P    + EG   KES + RRSK   +P   NLLRTPSLPPCIGRE E  ++  
Sbjct: 131 LQTPTKSPACIGRTEGVQDKESDN-RRSKMNGQPVRQNLLRTPSLPPCIGRE-ESNQESL 190

Query: 314 AARIRNSI--QPNLSEFFPTRQEILEKNFSLPMCRIPTSSDEIWHQFLIQMRKRRSQSEL 373
             R +  +    ++  + P +    E N S   C+      E+  + L Q+  R+S S+L
Sbjct: 191 PQRHKGLMTQTSSIPRYRPPKNTEGESNASTDGCK------EMRRRSLNQLTTRKSLSDL 250

Query: 374 ESEELQGFKDLGFTFDKKDINPTVVDIIPGLREKKE-EELESERTRRPYLSEAWVLQTHL 433
           E EELQGFKDLGFTFDKK+++P+VV+I+PGL+EKK  E+L  E+ RRPYLSEAW++Q+  
Sbjct: 251 EIEELQGFKDLGFTFDKKELSPSVVNILPGLQEKKRTEDLNPEKVRRPYLSEAWLVQSCA 310

Query: 434 PPPIPKWDTRKSAEDMKQQIKFWARAVASNV 452
           PPP P     +SAEDMK QIKFWARAVASNV
Sbjct: 311 PPP-PNLGASRSAEDMKAQIKFWARAVASNV 332

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BLAST of Lsi05G001330 vs. TrEMBL
Match: B9SB98_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0649740 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.3e-40
Identity = 112/300 (37.33%), Postives = 173/300 (57.67%), Query Frame = 1


Query: 172 NDSRPLSEHGVFAERPADNACLSTLDMDVSLGNSGVKHRSLLRMPSLPSRVE-QEQGIRE 231
           +D  P  + G+ AE P        + +  S  +S     +L+R PSLP R+E +E+ + E
Sbjct: 51  SDPSPNFDQGLLAENP--------IYIQKSSSSSKKVSGTLIRAPSLPPRLESREETLEE 110

Query: 232 KGNGS----------KPLIEHGLLQKPAKPPYVERKEEGTCSKESGSTRRSKSARKPRHG 291
           K + S          + L +  L+Q+    P    K      KES + +      KP   
Sbjct: 111 KESSSSRSKGMSKLIRQLSDQSLVQETNCKPTCIGKIGSIQEKESHNRKSKMMTGKPSKQ 170

Query: 292 NLLRTPSLPPCIGREKEFGEKE-----AAARIRNSIQPNLSEFFPTRQ--EILEKNFSLP 351
            LLRTPSLPPCIGRE+  G+ +       +R+     P  +E  P R   + + +++++P
Sbjct: 171 RLLRTPSLPPCIGREEVIGQNDDESDITMSRLIRQAMPYSTEVLPPRHTPKGMIQDYNMP 230

Query: 352 MCRIPTSSDEIWHQFLIQMRKRRSQSELESEELQGFKDLGFTFDKKDINPTVVDIIPGLR 411
             + P +  ++      Q   ++SQS+LES+E+QGFKDLGFTF+K+D++P+VV I+PGL+
Sbjct: 231 KYKPPRNWKDLGCTNPNQKVTKKSQSDLESQEVQGFKDLGFTFNKQDLDPSVVGILPGLQ 290

Query: 412 E--KKEEELESERTRRPYLSEAWVLQTHLPPPIPKWDTRKSAEDMKQQIKFWARAVASNV 452
           +  K++++ + +  +RPYLSEAW +Q+   PPIP W T+ SAEDMK Q+K+WARAVASNV
Sbjct: 291 QDNKRQDQDQKDEVKRPYLSEAWHVQS-CAPPIPLWATKNSAEDMKVQLKYWARAVASNV 341

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BLAST of Lsi05G001330 vs. TrEMBL
Match: A0A0B2R7D6_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_007816 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 7.3e-39
Identity = 105/263 (39.92%), Postives = 150/263 (57.03%), Query Frame = 1


Query: 204 NSGVKH-RSLLRMPSLPSRVEQEQGIREKGNGSKPLIEHGLLQKPAKPPYVERKEEGTCS 263
           N  + H + + R PS+P        +RE+ +     +   L+ +P  P       E  C+
Sbjct: 77  NGAIVHSKKIQRAPSMPPL-----RLREEDHKGSCSVRSKLVHQPTDPVVSHAASEPHCA 136

Query: 264 KESGSTRRSKSARKPRHGNLLRTPSLPPCIGREKEF--GEKEAAARIRNSIQPNLSEFFP 323
           +  G      + RK +   LLRTPSLPP IGRE++F   +       +    P   +  P
Sbjct: 137 QMKGHHNSDCNRRKSK---LLRTPSLPPSIGREEKFQVNDTRTGRSHKQPSTPTHIDILP 196

Query: 324 TRQEILEKNFSLPMCRIPTSSD----------EIWHQFLIQMRKRRSQSELESEELQGFK 383
            RQ    K+ S+P CR    ++          E+  +FL Q   RRS S+LE EE+QGFK
Sbjct: 197 PRQT--SKSCSIPRCRPARKTEVESFNKEGIMEMRRRFLNQKTMRRSLSDLEFEEVQGFK 256

Query: 384 DLGFTFDKKDINPTVVDIIPGLREKKEEELESER-TRRPYLSEAWVLQTHLPPPIPKWDT 443
           DLGF+F+K+ ++P++  I+PGL+EKK +E E ++  RRPYLSEAW++Q+   PPIP W +
Sbjct: 257 DLGFSFEKEALSPSLASILPGLQEKKRDETEEDKAARRPYLSEAWLVQS-CAPPIPNWAS 316

Query: 444 RKSAEDMKQQIKFWARAVASNVH 453
            KS+ DMK+QIKFWARAVASNVH
Sbjct: 317 HKSSGDMKEQIKFWARAVASNVH 328

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BLAST of Lsi05G001330 vs. TrEMBL
Match: I1LV37_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G227100 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 7.3e-39
Identity = 105/263 (39.92%), Postives = 150/263 (57.03%), Query Frame = 1


Query: 204 NSGVKH-RSLLRMPSLPSRVEQEQGIREKGNGSKPLIEHGLLQKPAKPPYVERKEEGTCS 263
           N  + H + + R PS+P        +RE+ +     +   L+ +P  P       E  C+
Sbjct: 77  NGAIVHSKKIQRAPSMPPL-----RLREEDHKGSCSVRSKLVHQPTDPVVSHAASEPHCA 136

Query: 264 KESGSTRRSKSARKPRHGNLLRTPSLPPCIGREKEF--GEKEAAARIRNSIQPNLSEFFP 323
           +  G      + RK +   LLRTPSLPP IGRE++F   +       +    P   +  P
Sbjct: 137 QMKGHHNSDCNRRKSK---LLRTPSLPPSIGREEKFQVNDTRTGRSHKQPSTPTHIDILP 196

Query: 324 TRQEILEKNFSLPMCRIPTSSD----------EIWHQFLIQMRKRRSQSELESEELQGFK 383
            RQ    K+ S+P CR    ++          E+  +FL Q   RRS S+LE EE+QGFK
Sbjct: 197 PRQT--SKSCSIPRCRPARKTEVESFNKEGIMEMRRRFLNQKTMRRSLSDLEFEEVQGFK 256

Query: 384 DLGFTFDKKDINPTVVDIIPGLREKKEEELESER-TRRPYLSEAWVLQTHLPPPIPKWDT 443
           DLGF+F+K+ ++P++  I+PGL+EKK +E E ++  RRPYLSEAW++Q+   PPIP W +
Sbjct: 257 DLGFSFEKEALSPSLASILPGLQEKKRDETEEDKAARRPYLSEAWLVQS-CAPPIPNWAS 316

Query: 444 RKSAEDMKQQIKFWARAVASNVH 453
            KS+ DMK+QIKFWARAVASNVH
Sbjct: 317 HKSSGDMKEQIKFWARAVASNVH 328

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BLAST of Lsi05G001330 vs. TAIR10
Match: AT2G42760.1 (AT2G42760.1 unknown protein)

HSP 1 Score: 69.3 bits (168), Expect = 6.8e-12
Identity = 50/128 (39.06%), Postives = 67/128 (52.34%), Query Frame = 1


Query: 350 IQMRKRRSQSELESEELQGFKDLGFTFDKKDINPT-VVDIIPGLRE---------KKEEE 409
           ++ RK +S S+LE EEL+GF DLGF F + D   + +V I+PGL+          K+EEE
Sbjct: 139 VRTRKGKSMSDLEYEELKGFMDLGFVFSEDDHKDSDLVSILPGLQRLVKKDDGVTKEEEE 198

Query: 410 LESE------RTRRPYLSEAW------VLQTHLPPPIPKW----DTRKSAEDMKQQIKFW 452
            E E      R  RPYLSEAW        +  + P I KW        S  D+K  ++ W
Sbjct: 199 EEEEDKIGGNRAARPYLSEAWDHCGGRKGKKQITPEI-KWRVPAPAAASEVDLKDNLRLW 258

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BLAST of Lsi05G001330 vs. TAIR10
Match: AT3G15115.1 (AT3G15115.1 unknown protein)

HSP 1 Score: 66.2 bits (160), Expect = 5.8e-11
Identity = 73/235 (31.06%), Postives = 106/235 (45.11%), Query Frame = 1


Query: 244 LQKPAKPPYVERKEEGTCSKESGSTRRSKSARKPRH-----GNLLRTPSLPPCIGRE--- 303
           LQK  K P V  K     S++   TR S S           G+L RT +LP  +GRE   
Sbjct: 121 LQK--KEPVVREKGIKEGSRKKNRTRISCSNNNSVQSCSMGGSLQRTQTLPSYLGREDDV 180

Query: 304 KEFGEKEA---------AARIRNSIQPNLSEFFPTRQEILEKNFSLPMCRIPTSS--DEI 363
            EF ++E             I NS   + S F PT+Q I  K   +P  R P +S  ++ 
Sbjct: 181 NEFQDQEIDDSRMGFLIREAIANSSSSSSSGFTPTKQNI-PKVSCIPRHRPPRNSRSEDA 240

Query: 364 WHQFLIQMRK-------RRSQSELESEELQGFKDLGFTFDKKDINPTVVDIIPGLREKKE 423
             + +++ +K       R++ S +E++++Q  KD                      EKK+
Sbjct: 241 IQELVVKSQKSPNRKTLRKTLSSIETKDIQMLKDFHIE-----------------TEKKQ 300

Query: 424 EELESERTRRPYLSEAWVLQTHLP-PPIPKWDTRKSAEDMKQQIKFWARAVASNV 452
           EE E ++ + P  +      T +   PIP W  + S +DMK QIKFWAR VASNV
Sbjct: 301 EEDEEKQRKVPCTTTGKNRSTAVVGQPIPVWVPKDSRKDMKAQIKFWARTVASNV 335

[Close]

BLAST of Lsi05G001330 vs. NCBI nr
Match: gi|778688583|ref|XP_011652784.1| (PREDICTED: uncharacterized protein LOC101221005 [Cucumis sativus])

HSP 1 Score: 722.6 bits (1864), Expect = 4.2e-205
Identity = 376/453 (83.00%), Postives = 395/453 (87.20%), Query Frame = 1


Query: 1   MDPINVSLHHSSPSSDEPLIDEALDLLELFWFFDNLLVRRNPRMLISRSDPCLSKVAHQV 60
           MDPIN SLH SSPS+DE     ALDLLELFWFFDNLL+RRNP+MLISRSDPCLSK+ HQV
Sbjct: 49  MDPINPSLHQSSPSTDE-----ALDLLELFWFFDNLLLRRNPKMLISRSDPCLSKLPHQV 108

Query: 61  FVETPTTNLCSSALDGGVSL-GNGGGIRRNLLRTPSLPSRMDRGEGIREKGNGSRPLVEH 120
           FVETP TNLCSS LD  +SL  NGG +RRNLLRTPSLPSRM RG+GI E+ N SRPL+EH
Sbjct: 109 FVETPPTNLCSSPLDAALSLHNNGGAVRRNLLRTPSLPSRMYRGQGIPEERNDSRPLLEH 168

Query: 121 GVLVETPVDNVSSSALDVDASIGNGGGKCRNLLRTPSLPSRVDREEGIQEKGNDSRPLSE 180
            VLVETPV NV SS+LD+D S  N       LLRTPSLP RVD+EEG     N S PLSE
Sbjct: 169 CVLVETPVHNVCSSSLDMDVSTAN-------LLRTPSLPPRVDQEEG-----NGSGPLSE 228

Query: 181 HGVFAERPADNACLSTLDMDVSLGNSGVKHRSLLRMPSLPSRVEQEQGIREKGNGSKPLI 240
           HGVFAE PAD+ACLSTLDM  S GNSG K RSL RMPSLPSRVE+EQGI+EKGNGSKPLI
Sbjct: 229 HGVFAEPPADHACLSTLDMPFSPGNSGDKRRSLRRMPSLPSRVEREQGIQEKGNGSKPLI 288

Query: 241 EHGLLQKPAKPPYVERKEEGTCSKESGSTRRSKSARKPRHGNLLRTPSLPPCIGREKEFG 300
           EH LLQKPAKPP VERKEEG  SKESGSTRRSKSARKP   NLLRTPSLPPCIGRE+EFG
Sbjct: 289 EHALLQKPAKPPSVERKEEGIRSKESGSTRRSKSARKPPQSNLLRTPSLPPCIGREREFG 348

Query: 301 EKEAAARIRNSIQPNLSEFFPTRQEILEKNFSLPMCRIPTSSDEIWHQFLIQMRKRRSQS 360
           E+EAAARIRNSIQPNLSEFFPTRQE LEK FSLPMCRIPTSSDE+WHQFLIQMRKRRSQS
Sbjct: 349 EREAAARIRNSIQPNLSEFFPTRQEFLEKKFSLPMCRIPTSSDEMWHQFLIQMRKRRSQS 408

Query: 361 ELESEELQGFKDLGFTFDKKDINPTVVDIIPGLREKKEEELESERTRRPYLSEAWVLQTH 420
           ELESEELQGFKDLGFTFDKKDINPTVVDIIPGLREKKEEELESERTRRPYLSEAW+LQTH
Sbjct: 409 ELESEELQGFKDLGFTFDKKDINPTVVDIIPGLREKKEEELESERTRRPYLSEAWMLQTH 468

Query: 421 LPPPIPKWDTRKSAEDMKQQIKFWARAVASNVH 453
           L PPIPKWD RKSAEDMKQQIKFWARAVASNVH
Sbjct: 469 LLPPIPKWDNRKSAEDMKQQIKFWARAVASNVH 484

[Close]

BLAST of Lsi05G001330 vs. NCBI nr
Match: gi|700202503|gb|KGN57636.1| (hypothetical protein Csa_3G236040 [Cucumis sativus])

HSP 1 Score: 722.6 bits (1864), Expect = 4.2e-205
Identity = 376/453 (83.00%), Postives = 395/453 (87.20%), Query Frame = 1


Query: 1   MDPINVSLHHSSPSSDEPLIDEALDLLELFWFFDNLLVRRNPRMLISRSDPCLSKVAHQV 60
           MDPIN SLH SSPS+DE     ALDLLELFWFFDNLL+RRNP+MLISRSDPCLSK+ HQV
Sbjct: 49  MDPINPSLHQSSPSTDE-----ALDLLELFWFFDNLLLRRNPKMLISRSDPCLSKLPHQV 108

Query: 61  FVETPTTNLCSSALDGGVSL-GNGGGIRRNLLRTPSLPSRMDRGEGIREKGNGSRPLVEH 120
           FVETP TNLCSS LD  +SL  NGG +RRNLLRTPSLPSRM RG+GI E+ N SRPL+EH
Sbjct: 109 FVETPPTNLCSSPLDAALSLHNNGGAVRRNLLRTPSLPSRMYRGQGIPEERNDSRPLLEH 168

Query: 121 GVLVETPVDNVSSSALDVDASIGNGGGKCRNLLRTPSLPSRVDREEGIQEKGNDSRPLSE 180
            VLVETPV NV SS+LD+D S  N       LLRTPSLP RVD+EEG     N S PLSE
Sbjct: 169 CVLVETPVHNVCSSSLDMDVSTAN-------LLRTPSLPPRVDQEEG-----NGSGPLSE 228

Query: 181 HGVFAERPADNACLSTLDMDVSLGNSGVKHRSLLRMPSLPSRVEQEQGIREKGNGSKPLI 240
           HGVFAE PAD+ACLSTLDM  S GNSG K RSL RMPSLPSRVE+EQGI+EKGNGSKPLI
Sbjct: 229 HGVFAEPPADHACLSTLDMPFSPGNSGDKRRSLRRMPSLPSRVEREQGIQEKGNGSKPLI 288

Query: 241 EHGLLQKPAKPPYVERKEEGTCSKESGSTRRSKSARKPRHGNLLRTPSLPPCIGREKEFG 300
           EH LLQKPAKPP VERKEEG  SKESGSTRRSKSARKP   NLLRTPSLPPCIGRE+EFG
Sbjct: 289 EHALLQKPAKPPSVERKEEGIRSKESGSTRRSKSARKPPQSNLLRTPSLPPCIGREREFG 348

Query: 301 EKEAAARIRNSIQPNLSEFFPTRQEILEKNFSLPMCRIPTSSDEIWHQFLIQMRKRRSQS 360
           E+EAAARIRNSIQPNLSEFFPTRQE LEK FSLPMCRIPTSSDE+WHQFLIQMRKRRSQS
Sbjct: 349 EREAAARIRNSIQPNLSEFFPTRQEFLEKKFSLPMCRIPTSSDEMWHQFLIQMRKRRSQS 408

Query: 361 ELESEELQGFKDLGFTFDKKDINPTVVDIIPGLREKKEEELESERTRRPYLSEAWVLQTH 420
           ELESEELQGFKDLGFTFDKKDINPTVVDIIPGLREKKEEELESERTRRPYLSEAW+LQTH
Sbjct: 409 ELESEELQGFKDLGFTFDKKDINPTVVDIIPGLREKKEEELESERTRRPYLSEAWMLQTH 468

Query: 421 LPPPIPKWDTRKSAEDMKQQIKFWARAVASNVH 453
           L PPIPKWD RKSAEDMKQQIKFWARAVASNVH
Sbjct: 469 LLPPIPKWDNRKSAEDMKQQIKFWARAVASNVH 484

[Close]

BLAST of Lsi05G001330 vs. NCBI nr
Match: gi|659112411|ref|XP_008456207.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 [Cucumis melo])

HSP 1 Score: 645.2 bits (1663), Expect = 8.5e-182
Identity = 329/385 (85.45%), Postives = 347/385 (90.13%), Query Frame = 1


Query: 1   MDPINVSLHHSSPSSDEPLIDEALDLLELFWFFDNLLVRRNPRMLISRSDPCLSKVAHQV 60
           MDPIN SLH SSPSSD PLIDEALDLLELFWFFDNLL+RRNPRMLISRSDPCLSK+ HQV
Sbjct: 1   MDPINPSLHQSSPSSDAPLIDEALDLLELFWFFDNLLLRRNPRMLISRSDPCLSKLPHQV 60

Query: 61  FVETPTTNLCSSALDGGVSLGNGGG--IRRNLLRTPSLPSRMDRGEGIREKGNGSRPLVE 120
           FVETP TNL S ALD GVSL N G   +RRNLLRTPSLPSRM RG+GIRE+GNGSRPLVE
Sbjct: 61  FVETPPTNLRSPALDAGVSLQNNGDGVVRRNLLRTPSLPSRMYRGQGIREEGNGSRPLVE 120

Query: 121 HGVLVETPVDNVSSSALDVDASIGNGGGKCRNLLRTPSLPSRVDREEGIQEKGNDSRPLS 180
           H VL+ETPVDNV SS+LD+D S GN  GKCRNLLRTPSLP RV++ EGI+EK ND+ PLS
Sbjct: 121 HCVLLETPVDNVCSSSLDMDVSSGNPAGKCRNLLRTPSLPPRVEQGEGIKEKVNDAGPLS 180

Query: 181 EHGVFAERPADNACLSTLDMDVSLGNSGVKHRSLLRMPSLPSRVEQEQGIREKGNGSKPL 240
           EHGVFAERPADNACLSTLDM  S GNSG K RSL R+PSLPSRVE+EQGI+EKGNGSKPL
Sbjct: 181 EHGVFAERPADNACLSTLDMGFSPGNSGDKRRSLRRIPSLPSRVEREQGIQEKGNGSKPL 240

Query: 241 IEHGLLQKPAKPPYVERKEEGTCSKESGSTRRSKSARKPRHGNLLRTPSLPPCIGREKEF 300
           IEHGLLQKPAKPPYVERKEEGT  KESGSTRRSKSARKP   NLLRTPSLPPCIGREKEF
Sbjct: 241 IEHGLLQKPAKPPYVERKEEGTRCKESGSTRRSKSARKPPQSNLLRTPSLPPCIGREKEF 300

Query: 301 GEKEAAARIRNSIQPNLSEFFPTRQEILEKNFSLPMCRIPTSSDEIWHQFLIQMRKRRSQ 360
           GE+EAAARIRNSIQPNLSEFFPTRQEILEKNFSLPMCRIPTSSDE+WHQFLIQMRKRRSQ
Sbjct: 301 GEREAAARIRNSIQPNLSEFFPTRQEILEKNFSLPMCRIPTSSDEVWHQFLIQMRKRRSQ 360

Query: 361 SELESEELQGFKDLGFTFDKKDINP 384
           SELESEE+QGFKDLGFTFDKK   P
Sbjct: 361 SELESEEVQGFKDLGFTFDKKRYKP 385

[Close]

BLAST of Lsi05G001330 vs. NCBI nr
Match: gi|595892990|ref|XP_007213579.1| (hypothetical protein PRUPE_ppa014990mg [Prunus persica])

HSP 1 Score: 185.7 bits (470), Expect = 1.8e-43
Identity = 121/271 (44.65%), Postives = 162/271 (59.78%), Query Frame = 1


Query: 194 STLDMDVSLGNSGVKHRSLLRMPSLPSRV--EQEQGIREKGNGS--------KPLIEHGL 253
           S L    +   +G    +L+R PSLP  +   QE+ ++ K +GS        +      +
Sbjct: 71  SLLTTSKATQGNGFAGPNLVRTPSLPLHIGRRQEEEVQVKQSGSNKSSSKLTRQTSHQKM 130

Query: 254 LQKPAKPPYVERKEEGTCSKESGSTRRSKSARKPRHGNLLRTPSLPPCIGREKEFGEKEA 313
           LQ P K P    + EG   KES + RRSK   +P   NLLRTPSLPPCIGRE E  ++  
Sbjct: 131 LQTPTKSPACIGRTEGVQDKESDN-RRSKMNGQPVRQNLLRTPSLPPCIGRE-ESNQESL 190

Query: 314 AARIRNSI--QPNLSEFFPTRQEILEKNFSLPMCRIPTSSDEIWHQFLIQMRKRRSQSEL 373
             R +  +    ++  + P +    E N S   C+      E+  + L Q+  R+S S+L
Sbjct: 191 PQRHKGLMTQTSSIPRYRPPKNTEGESNASTDGCK------EMRRRSLNQLTTRKSLSDL 250

Query: 374 ESEELQGFKDLGFTFDKKDINPTVVDIIPGLREKKE-EELESERTRRPYLSEAWVLQTHL 433
           E EELQGFKDLGFTFDKK+++P+VV+I+PGL+EKK  E+L  E+ RRPYLSEAW++Q+  
Sbjct: 251 EIEELQGFKDLGFTFDKKELSPSVVNILPGLQEKKRTEDLNPEKVRRPYLSEAWLVQSCA 310

Query: 434 PPPIPKWDTRKSAEDMKQQIKFWARAVASNV 452
           PPP P     +SAEDMK QIKFWARAVASNV
Sbjct: 311 PPP-PNLGASRSAEDMKAQIKFWARAVASNV 332

[Close]

BLAST of Lsi05G001330 vs. NCBI nr
Match: gi|645240140|ref|XP_008226466.1| (PREDICTED: uncharacterized protein LOC103326040 [Prunus mume])

HSP 1 Score: 183.0 bits (463), Expect = 1.2e-42
Identity = 121/271 (44.65%), Postives = 161/271 (59.41%), Query Frame = 1


Query: 194 STLDMDVSLGNSGVKHRSLLRMPSLPSRV--EQEQGIREKGNGSKPLIE--------HGL 253
           S L    +   +G    +L+R PSL   +   QE+ ++ K +GS   +           +
Sbjct: 71  SLLTTSKATQGNGFAGPNLVRTPSLHLHIGRRQEEEVQVKQSGSNKSLSKLTRQTSHQKM 130

Query: 254 LQKPAKPPYVERKEEGTCSKESGSTRRSKSARKPRHGNLLRTPSLPPCIGREKEFGEKEA 313
           LQ P K P    + EG   KES + RRSK   +P   NLLRTPSLPPCIGRE E  ++  
Sbjct: 131 LQAPTKSPACIGRTEGVQDKESDN-RRSKMNGQPVRQNLLRTPSLPPCIGRE-ESNQESV 190

Query: 314 AARIRNSIQPNLS--EFFPTRQEILEKNFSLPMCRIPTSSDEIWHQFLIQMRKRRSQSEL 373
             R +  +  + S   + P +    E N S   C+      E+  + L Q+  R+S S+L
Sbjct: 191 PQRHKGLMTQSSSIPRYRPPKNTEGESNASTDGCK------EMRRRSLNQLTARKSLSDL 250

Query: 374 ESEELQGFKDLGFTFDKKDINPTVVDIIPGLREKK-EEELESERTRRPYLSEAWVLQTHL 433
           E EELQGFKDLGFTFDKK+++P+VV+I+PGL+EKK  E+L  E+ RRPYLSEAW++Q+  
Sbjct: 251 EIEELQGFKDLGFTFDKKELSPSVVNILPGLQEKKGTEDLNPEKVRRPYLSEAWLVQSCA 310

Query: 434 PPPIPKWDTRKSAEDMKQQIKFWARAVASNV 452
           PPP P     +SAEDMK QIKFWARAVASNV
Sbjct: 311 PPP-PNLGASRSAEDMKAQIKFWARAVASNV 332

The following BLAST results are available for this feature:

BLAST of Lsi05G001330 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G001330 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC64_CUCSA	2.9e-205	83.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G236040 PE=4 SV=1	[more]
M5WZM9_PRUPE	1.3e-43	44.65	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014990mg PE=4 SV=1	[more]
B9SB98_RICCO	1.3e-40	37.33	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0649740 PE=4 SV=1	[more]
A0A0B2R7D6_GLYSO	7.3e-39	39.92	Uncharacterized protein OS=Glycine soja GN=glysoja_007816 PE=4 SV=1	[more]
I1LV37_SOYBN	7.3e-39	39.92	Uncharacterized protein OS=Glycine max GN=GLYMA_12G227100 PE=4 SV=1	[more]

BLAST of Lsi05G001330 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42760.1	6.8e-12	39.06	unknown protein	[more]
AT3G15115.1	5.8e-11	31.06	unknown protein	[more]

BLAST of Lsi05G001330 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778688583\|ref\|XP_011652784.1\|	4.2e-205	83.00	PREDICTED: uncharacterized protein LOC101221005 [Cucumis sativus]	[more]
gi\|700202503\|gb\|KGN57636.1\|	4.2e-205	83.00	hypothetical protein Csa_3G236040 [Cucumis sativus]	[more]
gi\|659112411\|ref\|XP_008456207.1\|	8.5e-182	85.45	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 [Cucumis me...	[more]
gi\|595892990\|ref\|XP_007213579.1\|	1.8e-43	44.65	hypothetical protein PRUPE_ppa014990mg [Prunus persica]	[more]
gi\|645240140\|ref\|XP_008226466.1\|	1.2e-42	44.65	PREDICTED: uncharacterized protein LOC103326040 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G001330.1	Lsi05G001330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33785	FAMILY NOT NAMED	coord: 207..231 score: 6.2E-44coord: 255..452 score: 6.2E-44coord: 1..164 score: 6.2
None	No IPR available	PANTHER	PTHR33785:SF1	GENOMIC DNA, CHROMOSOME 3, BAC CLONE:F4B12	coord: 1..164 score: 6.2E-44coord: 207..231 score: 6.2E-44coord: 255..452 score: 6.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G001330	Csa3G236040	Cucumber (Chinese Long) v2	culsiB211
Lsi05G001330	CSPI03G19500	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G001330	Cucsa.032460	Cucumber (Gy14) v1	cgylsiB003
Lsi05G001330	Cla004287	Watermelon (97103) v1	lsiwmB361
Lsi05G001330	MELO3C019396	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G001330	ClCG05G009220	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G001330	MELO3C019395.2	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G001330	Cla97C05G091540	Watermelon (97103) v2	lsiwmbB329
Lsi05G001330	Bhi01G001149	Wax gourd	lsiwgoB431
Lsi05G001330	Cp4.1LG14g03630	Cucurbita pepo (Zucchini)	cpelsiB177
Lsi05G001330	Carg11340	Silver-seed gourd	carlsiB595
Lsi05G001330	CsaV3_3G019560	Cucumber (Chinese Long) v3	cuclsiB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G001330	Cucurbita maxima (Rimu)	cmalsiB316
Lsi05G001330	Cucurbita maxima (Rimu)	cmalsiB690
Lsi05G001330	Cucurbita moschata (Rifu)	cmolsiB304
Lsi05G001330	Cucurbita moschata (Rifu)	cmolsiB683
Lsi05G001330	Cucurbita pepo (Zucchini)	cpelsiB369
Lsi05G001330	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G001330	Silver-seed gourd	carlsiB039