CsaV3_3G019560 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTGGAATGAATTATGAAGCGAATGTTTGAAAGTTGTAAGTGAGAAACGGGCAATTGGGAATACAACTTGAAGTATTATTAGTAATATGACAAACTAAACCAAAAATGTATATAATAATATTATATTTGTATATTTGTGGGTGGAGATCAAAAGACAGCGCATGTTACACTATCTCACATGCCCTTCTCCTCTGCTCATCATCCTAATCATATAATGGCGTTTTCAGAAGAAATCTTGATGGCCACTCCAGTTCCCAGCTACCCATTTCCTCATTTTTCTCCCTCTCTTTCTTCCCTTTTTGGTCAAACCCCACCAATATCCATGGACCCTATCAATCCCTCTCTTCATCAATCTTCTCCTTCGACCGATGAAGCTTTGGATCTTTTAGAGCTTTTTTGGTTCTTTGACAATCTTCTTCTTAGGAGGAACCCCAAGATGTTGATCTCCCGCTCTGATCCTTGTCTTTCTAAGCTTCCCCACCAGGTCTTTGTTGAAACTCCTCCTACTAATCTCTGCTCATCTCCTTTGGATGCTGCTCTTTCCCTCCACAATAATGGTGGTGCTGTACGTCGGAATCTGCTTCGAACGCCGTCCTTACCATCCCGTATGTATCGTGGACAGGGAATTCCAGAGGAACGAAATGATTCTAGGCCATTGCTCGAGCATTGTGTGCTTGTTGAAACTCCTGTTCATAATGTTTGCTCATCTTCTTTGGATATGGATGTTTCGACTGCGAATCTCCTCCGAACACCATCGTTACCGCCCCGTGTGGACCAAGAGGAAGGAAATGGCTCTGGGCCATTATCTGAGCATGGTGTGTTTGCAGAACCTCCTGCTGATCATGCCTGCTTGTCTACTTTGGATATGCCTTTTTCACCGGGAAATAGTGGAGATAAACGTCGGAGTCTTCGCCGAATGCCATCATTACCATCCCGTGTGGAACGAGAACAAGGCATTCAAGAGAAAGGGAATGGTTCCAAGCCATTAATAGAGCATGCCTTGCTTCAAAAACCGGCCAAACCACCTTCTGTTGAGAGGAAAGAAGAAGGAATTCGCAGCAAAGAAAGTGGCAGCACTCGGAGGAGCAAATCGGCGAGGAAACCACCGCAGAGTAATCTGCTGAGAACACCATCCTTGCCACCATGTATAGGGAGGGAAAGGGAATTTGGAGAAAGGGAAGCTGCTGCTAGAATCAGAAACTCTATTCAACCAAACCTTTCTGAATTCTTTCCCACCAGACAAGAGGTATTGCAATATCATTGCTCTGTTTCAACAACTGTCTCCTAACATTCTTTATGTGTGCTTGAATGATCATCGAGCTCGCTTACGGTTAACAGTAAACACATCAAATTGAGAATATAATGAAAAGATTAAACTATGTTGAAGGTAATTTAATATAGTAGTATCATAGCAAGAAGTCTTAAATTCCAACATTTTCAATGAATCCATATGTTGAGCTGTATGCTAATGTTGAGTCTTGATGTGATTGTGAAAAGATGACATTCATGTTGGCCCAGTGAAATACCGTGTGTTAGATAATCGAAGTTTCTTGAAAATTATTAAGATAAAACATGAGCATAATGTAAGGAGTGAAACCTTGGGCATTCCACTTATTAAAAGAACAGGTTTTACTTGATAACTTAAAATTGTTGTGAATGCCAATTTAGCAACTTGAAAATTCAATTTGGATTCTAGTTTGAAGAAACTTCAGAAATGTTGAAGGTCTTAAATGAGTTAATAAACACAACACATTATAGGATAGAACGACTAGAATAAGTTCCATCTGTACTTTGCTTCTTTTTAATAACATTTGGTGTGCTCATCATTCACAACAGTTTCTTGAAAAGAAGTTCAGCCTCCCAATGTGTCGAATCCCGACAAGCAGTGACGAAATGTGGCACCAATTTCTCATCCAAATGAGGAAGAGAAGGAGCCAAAGTGAATTAGAATCAGAAGAACTGCAAGGTTTCAAGGACTTAGGATTCACATTTGACAAAAAAGATATAAACCCAACAGTGGTTGACATAATTCCAGGGTTAAGAGAGAAAAAAGAGGAAGAATTGGAGAGTGAAAGAACTAGAAGGCCTTATCTTTCTGAAGCTTGGATGCTCCAAACTCATCTCCTTCCTCCAATTCCAAAATGGGACAATAGAAAATCAGCAGAAGACATGAAACAACAAATCAAGTTTTGGGCTAGAGCTGTTGCTTCTAATGTGCACTAAAATTGGTGAGGGAACCCATAAACATACCATATTAAGGAAAAATTGTATAGGTTGCACCATTTTCAAAGGAAAGAAAGAAACTATTTTTGTAATGTCTTTCCTCTTTTTTTTTTTGTCTTTAATAAGCTAAGTCTGTTTGTGCAGCTACCCAAGACTAAATGGAATTGGATTGGAGTCCAAATGAATCTCACTTTATCGGAGAAAGTAGGGTAAAAAGTGATGGACAGACATTTGAATGAGCATTGAGAAGAACACAATATAGAACTTTGTCACTTTTCACCACCAAACAAAGAGAAAAATGCCATCATTCCCTATTTGAATCTTCAGAAAGTTTACTTCAAAATTTGAGCAGGTTGTTGCATTGAAGACTGGGCCAAATGATCCTCTTGCATTCATAAAAAGAAAAAGGGAAAAGGGTGAGAATTGAAATGTGGGAGCTAGAAACAGCTAGAACCAAGGTCAAATGTATTTGGTATACGACAATAAGATTAGCAAAATGAGAGTTATTTATTTATTTTTTCAAATTTTGTTTTATCTTTTCATAAATTGATTAATTATTTAAACTTCAACTAATTCTTTTTCAATTGGAGATTTATATTTTAAATTCTCTTGTTTTACA ATGCCCTTCTCCTCTGCTCATCATCCTAATCATATAATGGCGTTTTCAGAAGAAATCTTGATGGCCACTCCAGTTCCCAGCTACCCATTTCCTCATTTTTCTCCCTCTCTTTCTTCCCTTTTTGGTCAAACCCCACCAATATCCATGGACCCTATCAATCCCTCTCTTCATCAATCTTCTCCTTCGACCGATGAAGCTTTGGATCTTTTAGAGCTTTTTTGGTTCTTTGACAATCTTCTTCTTAGGAGGAACCCCAAGATGTTGATCTCCCGCTCTGATCCTTGTCTTTCTAAGCTTCCCCACCAGGTCTTTGTTGAAACTCCTCCTACTAATCTCTGCTCATCTCCTTTGGATGCTGCTCTTTCCCTCCACAATAATGGTGGTGCTGTACGTCGGAATCTGCTTCGAACGCCGTCCTTACCATCCCGTATGTATCGTGGACAGGGAATTCCAGAGGAACGAAATGATTCTAGGCCATTGCTCGAGCATTGTGTGCTTGTTGAAACTCCTGTTCATAATGTTTGCTCATCTTCTTTGGATATGGATGTTTCGACTGCGAATCTCCTCCGAACACCATCGTTACCGCCCCGTGTGGACCAAGAGGAAGGAAATGGCTCTGGGCCATTATCTGAGCATGGTGTGTTTGCAGAACCTCCTGCTGATCATGCCTGCTTGTCTACTTTGGATATGCCTTTTTCACCGGGAAATAGTGGAGATAAACGTCGGAGTCTTCGCCGAATGCCATCATTACCATCCCGTGTGGAACGAGAACAAGGCATTCAAGAGAAAGGGAATGGTTCCAAGCCATTAATAGAGCATGCCTTGCTTCAAAAACCGGCCAAACCACCTTCTGTTGAGAGGAAAGAAGAAGGAATTCGCAGCAAAGAAAGTGGCAGCACTCGGAGGAGCAAATCGGCGAGGAAACCACCGCAGAGTAATCTGCTGAGAACACCATCCTTGCCACCATGTATAGGGAGGGAAAGGGAATTTGGAGAAAGGGAAGCTGCTGCTAGAATCAGAAACTCTATTCAACCAAACCTTTCTGAATTCTTTCCCACCAGACAAGAGTTTCTTGAAAAGAAGTTCAGCCTCCCAATGTGTCGAATCCCGACAAGCAGTGACGAAATGTGGCACCAATTTCTCATCCAAATGAGGAAGAGAAGGAGCCAAAGTGAATTAGAATCAGAAGAACTGCAAGGTTTCAAGGACTTAGGATTCACATTTGACAAAAAAGATATAAACCCAACAGTGGTTGACATAATTCCAGGGTTAAGAGAGAAAAAAGAGGAAGAATTGGAGAGTGAAAGAACTAGAAGGCCTTATCTTTCTGAAGCTTGGATGCTCCAAACTCATCTCCTTCCTCCAATTCCAAAATGGGACAATAGAAAATCAGCAGAAGACATGAAACAACAAATCAAGTTTTGGGCTAGAGCTGTTGCTTCTAATGTGCACTAA ATGCCCTTCTCCTCTGCTCATCATCCTAATCATATAATGGCGTTTTCAGAAGAAATCTTGATGGCCACTCCAGTTCCCAGCTACCCATTTCCTCATTTTTCTCCCTCTCTTTCTTCCCTTTTTGGTCAAACCCCACCAATATCCATGGACCCTATCAATCCCTCTCTTCATCAATCTTCTCCTTCGACCGATGAAGCTTTGGATCTTTTAGAGCTTTTTTGGTTCTTTGACAATCTTCTTCTTAGGAGGAACCCCAAGATGTTGATCTCCCGCTCTGATCCTTGTCTTTCTAAGCTTCCCCACCAGGTCTTTGTTGAAACTCCTCCTACTAATCTCTGCTCATCTCCTTTGGATGCTGCTCTTTCCCTCCACAATAATGGTGGTGCTGTACGTCGGAATCTGCTTCGAACGCCGTCCTTACCATCCCGTATGTATCGTGGACAGGGAATTCCAGAGGAACGAAATGATTCTAGGCCATTGCTCGAGCATTGTGTGCTTGTTGAAACTCCTGTTCATAATGTTTGCTCATCTTCTTTGGATATGGATGTTTCGACTGCGAATCTCCTCCGAACACCATCGTTACCGCCCCGTGTGGACCAAGAGGAAGGAAATGGCTCTGGGCCATTATCTGAGCATGGTGTGTTTGCAGAACCTCCTGCTGATCATGCCTGCTTGTCTACTTTGGATATGCCTTTTTCACCGGGAAATAGTGGAGATAAACGTCGGAGTCTTCGCCGAATGCCATCATTACCATCCCGTGTGGAACGAGAACAAGGCATTCAAGAGAAAGGGAATGGTTCCAAGCCATTAATAGAGCATGCCTTGCTTCAAAAACCGGCCAAACCACCTTCTGTTGAGAGGAAAGAAGAAGGAATTCGCAGCAAAGAAAGTGGCAGCACTCGGAGGAGCAAATCGGCGAGGAAACCACCGCAGAGTAATCTGCTGAGAACACCATCCTTGCCACCATGTATAGGGAGGGAAAGGGAATTTGGAGAAAGGGAAGCTGCTGCTAGAATCAGAAACTCTATTCAACCAAACCTTTCTGAATTCTTTCCCACCAGACAAGAGTTTCTTGAAAAGAAGTTCAGCCTCCCAATGTGTCGAATCCCGACAAGCAGTGACGAAATGTGGCACCAATTTCTCATCCAAATGAGGAAGAGAAGGAGCCAAAGTGAATTAGAATCAGAAGAACTGCAAGGTTTCAAGGACTTAGGATTCACATTTGACAAAAAAGATATAAACCCAACAGTGGTTGACATAATTCCAGGGTTAAGAGAGAAAAAAGAGGAAGAATTGGAGAGTGAAAGAACTAGAAGGCCTTATCTTTCTGAAGCTTGGATGCTCCAAACTCATCTCCTTCCTCCAATTCCAAAATGGGACAATAGAAAATCAGCAGAAGACATGAAACAACAAATCAAGTTTTGGGCTAGAGCTGTTGCTTCTAATGTGCACTAA MPFSSAHHPNHIMAFSEEILMATPVPSYPFPHFSPSLSSLFGQTPPISMDPINPSLHQSSPSTDEALDLLELFWFFDNLLLRRNPKMLISRSDPCLSKLPHQVFVETPPTNLCSSPLDAALSLHNNGGAVRRNLLRTPSLPSRMYRGQGIPEERNDSRPLLEHCVLVETPVHNVCSSSLDMDVSTANLLRTPSLPPRVDQEEGNGSGPLSEHGVFAEPPADHACLSTLDMPFSPGNSGDKRRSLRRMPSLPSRVEREQGIQEKGNGSKPLIEHALLQKPAKPPSVERKEEGIRSKESGSTRRSKSARKPPQSNLLRTPSLPPCIGREREFGEREAAARIRNSIQPNLSEFFPTRQEFLEKKFSLPMCRIPTSSDEMWHQFLIQMRKRRSQSELESEELQGFKDLGFTFDKKDINPTVVDIIPGLREKKEEELESERTRRPYLSEAWMLQTHLLPPIPKWDNRKSAEDMKQQIKFWARAVASNVH
BLAST of CsaV3_3G019560 vs. NCBI nr
Match: KGN57636.1 (hypothetical protein Csa_3G236040 [Cucumis sativus]) HSP 1 Score: 882.5 bits (2279), Expect = 6.6e-253 Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0
BLAST of CsaV3_3G019560 vs. NCBI nr
Match: XP_011652784.1 (PREDICTED: uncharacterized protein LOC101221005 [Cucumis sativus]) HSP 1 Score: 882.5 bits (2279), Expect = 6.6e-253 Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0
BLAST of CsaV3_3G019560 vs. NCBI nr
Match: XP_016901888.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 [Cucumis melo]) HSP 1 Score: 556.2 bits (1432), Expect = 1.1e-154 Identity = 299/385 (77.66%), Postives = 310/385 (80.52%), Query Frame = 0
BLAST of CsaV3_3G019560 vs. NCBI nr
Match: XP_022142842.1 (uncharacterized protein LOC111012857 [Momordica charantia]) HSP 1 Score: 529.6 bits (1363), Expect = 1.1e-146 Identity = 299/508 (58.86%), Postives = 340/508 (66.93%), Query Frame = 0
BLAST of CsaV3_3G019560 vs. NCBI nr
Match: XP_023551849.1 (uncharacterized protein LOC111809699 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551850.1 uncharacterized protein LOC111809699 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 513.8 bits (1322), Expect = 6.2e-142 Identity = 306/511 (59.88%), Postives = 318/511 (62.23%), Query Frame = 0
BLAST of CsaV3_3G019560 vs. TAIR10
Match: AT2G42760.1 (unknown protein) HSP 1 Score: 59.7 bits (143), Expect = 5.8e-09 Identity = 43/124 (34.68%), Postives = 56/124 (45.16%), Query Frame = 0
BLAST of CsaV3_3G019560 vs. TAIR10
Match: AT3G15115.1 (unknown protein) HSP 1 Score: 55.8 bits (133), Expect = 8.4e-08 Identity = 71/237 (29.96%), Postives = 106/237 (44.73%), Query Frame = 0
BLAST of CsaV3_3G019560 vs. TAIR10
Match: AT1G53180.1 (unknown protein) HSP 1 Score: 46.6 bits (109), Expect = 5.1e-05 Identity = 99/433 (22.86%), Postives = 157/433 (36.26%), Query Frame = 0
BLAST of CsaV3_3G019560 vs. TrEMBL
Match: tr|A0A0A0LC64|A0A0A0LC64_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G236040 PE=4 SV=1) HSP 1 Score: 882.5 bits (2279), Expect = 4.4e-253 Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0
BLAST of CsaV3_3G019560 vs. TrEMBL
Match: tr|A0A1S4E0Y7|A0A1S4E0Y7_CUCME (LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 OS=Cucumis melo OX=3656 GN=LOC103496210 PE=4 SV=1) HSP 1 Score: 556.2 bits (1432), Expect = 7.2e-155 Identity = 299/385 (77.66%), Postives = 310/385 (80.52%), Query Frame = 0
BLAST of CsaV3_3G019560 vs. TrEMBL
Match: tr|M5WZM9|M5WZM9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G173500 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 2.2e-42 Identity = 118/254 (46.46%), Postives = 156/254 (61.42%), Query Frame = 0
BLAST of CsaV3_3G019560 vs. TrEMBL
Match: tr|A0A2P6QAD4|A0A2P6QAD4_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0032271 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 1.7e-39 Identity = 116/264 (43.94%), Postives = 151/264 (57.20%), Query Frame = 0
BLAST of CsaV3_3G019560 vs. TrEMBL
Match: tr|A0A0L9ULU9|A0A0L9ULU9_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g113300 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 3.2e-38 Identity = 93/185 (50.27%), Postives = 123/185 (66.49%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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