Lsi04G021460 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi04G021460
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionU-box domain-containing protein 12
Locationchr04 : 28574194 .. 28575156 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGTTGCATCTTTCCACTCATCATCTTCCATGAGATCCATGAGTGTTACTACTGCACATAAAACTATAACAGAGTGTATATCTGGCGCTCGTTCGGATGCTCTCGAAGTTCAGGAAAAGGCTCTTCAAAACTTGGTCACCATTACTCAGGTTAGTCCTCTTTACAGGAACTTGCTTGTACAAGTAGATGGATCAATTTCAATTCTTATTGCTCTCTCCAAATCATCTTCCTCTACCATCCAATCTCTTTCATTGTCAATTCTCTTCAATCTCTCTCTGAACCATGACATGAAAAAGCTTCTTGCATCAATGGATACCATCTACCATCTCAATACACTTATATCCCTAGGCTCCCCCGAAACCGTCAAGCTATCGTCCTCATTGATTTGCAGCCTTGCAATGCTAGACAAAAACAAAGCTAAGTTTGGTGTAGCAGGGACGATACAGTTATTGGTTAGAGCACTTTCAGTCCCTGCAGTTCCTGCTGCCCATCACCTTCTCTGTTCTTTAGCTGAACTAGGCCAGTTTCATGGAAACTGCACTGTGGCCGTTCGCTCGGGAGCCATTCGAGTTCTTATTGATGTAGTGGAGAGTACTAGTGTAGAGGATCTCGCTGGCACTGCTCTTGTTGTTCTCGGTCTCTTGGCTAGATTTGAGGAAGGGTTGAGAGCTTTGATTAAAACTGATCGGATTGTAATTTCGATGTTTAATGTGCTGAAAGGAAGGTGTATGCTCAGTAAAGAAGGTGCAACCGAGATCCTTTTGCGATTGTTCGACGAAAGGGTAGGTTGTCTGAGTGATGCTTTGAGGTTGCCAGAGTTTTTGGGTGTTGTTGCTGATCTTTCTGTAAGAGGGTCAGCAAAAGCAAGAGAGAGAGCCAGTTTACTCATGAACAAGCTCATGAATACCGACTTTGATACATATTCAAATGCTGATTCAGTGTATTCACAATGGTATTGA

mRNA sequence

ATGTCAGTTGCATCTTTCCACTCATCATCTTCCATGAGATCCATGAGTGTTACTACTGCACATAAAACTATAACAGAGTGTATATCTGGCGCTCGTTCGGATGCTCTCGAAGTTCAGGAAAAGGCTCTTCAAAACTTGGTCACCATTACTCAGGTTAGTCCTCTTTACAGGAACTTGCTTGTACAAGTAGATGGATCAATTTCAATTCTTATTGCTCTCTCCAAATCATCTTCCTCTACCATCCAATCTCTTTCATTGTCAATTCTCTTCAATCTCTCTCTGAACCATGACATGAAAAAGCTTCTTGCATCAATGGATACCATCTACCATCTCAATACACTTATATCCCTAGGCTCCCCCGAAACCGTCAAGCTATCGTCCTCATTGATTTGCAGCCTTGCAATGCTAGACAAAAACAAAGCTAAGTTTGGTGTAGCAGGGACGATACAGTTATTGGTTAGAGCACTTTCAGTCCCTGCAGTTCCTGCTGCCCATCACCTTCTCTGTTCTTTAGCTGAACTAGGCCAGTTTCATGGAAACTGCACTGTGGCCGTTCGCTCGGGAGCCATTCGAGTTCTTATTGATGTAGTGGAGAGTACTAGTGTAGAGGATCTCGCTGGCACTGCTCTTGTTGTTCTCGGTCTCTTGGCTAGATTTGAGGAAGGGTTGAGAGCTTTGATTAAAACTGATCGGATTGTAATTTCGATGTTTAATGTGCTGAAAGGAAGGTGTATGCTCAGTAAAGAAGGTGCAACCGAGATCCTTTTGCGATTGTTCGACGAAAGGGTAGGTTGTCTGAGTGATGCTTTGAGGTTGCCAGAGTTTTTGGGTGTTGTTGCTGATCTTTCTGTAAGAGGGTCAGCAAAAGCAAGAGAGAGAGCCAGTTTACTCATGAACAAGCTCATGAATACCGACTTTGATACATATTCAAATGCTGATTCAGTGTATTCACAATGGTATTGA

Coding sequence (CDS)

ATGTCAGTTGCATCTTTCCACTCATCATCTTCCATGAGATCCATGAGTGTTACTACTGCACATAAAACTATAACAGAGTGTATATCTGGCGCTCGTTCGGATGCTCTCGAAGTTCAGGAAAAGGCTCTTCAAAACTTGGTCACCATTACTCAGGTTAGTCCTCTTTACAGGAACTTGCTTGTACAAGTAGATGGATCAATTTCAATTCTTATTGCTCTCTCCAAATCATCTTCCTCTACCATCCAATCTCTTTCATTGTCAATTCTCTTCAATCTCTCTCTGAACCATGACATGAAAAAGCTTCTTGCATCAATGGATACCATCTACCATCTCAATACACTTATATCCCTAGGCTCCCCCGAAACCGTCAAGCTATCGTCCTCATTGATTTGCAGCCTTGCAATGCTAGACAAAAACAAAGCTAAGTTTGGTGTAGCAGGGACGATACAGTTATTGGTTAGAGCACTTTCAGTCCCTGCAGTTCCTGCTGCCCATCACCTTCTCTGTTCTTTAGCTGAACTAGGCCAGTTTCATGGAAACTGCACTGTGGCCGTTCGCTCGGGAGCCATTCGAGTTCTTATTGATGTAGTGGAGAGTACTAGTGTAGAGGATCTCGCTGGCACTGCTCTTGTTGTTCTCGGTCTCTTGGCTAGATTTGAGGAAGGGTTGAGAGCTTTGATTAAAACTGATCGGATTGTAATTTCGATGTTTAATGTGCTGAAAGGAAGGTGTATGCTCAGTAAAGAAGGTGCAACCGAGATCCTTTTGCGATTGTTCGACGAAAGGGTAGGTTGTCTGAGTGATGCTTTGAGGTTGCCAGAGTTTTTGGGTGTTGTTGCTGATCTTTCTGTAAGAGGGTCAGCAAAAGCAAGAGAGAGAGCCAGTTTACTCATGAACAAGCTCATGAATACCGACTTTGATACATATTCAAATGCTGATTCAGTGTATTCACAATGGTATTGA

Protein sequence

MSVASFHSSSSMRSMSVTTAHKTITECISGARSDALEVQEKALQNLVTITQVSPLYRNLLVQVDGSISILIALSKSSSSTIQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLISLGSPETVKLSSSLICSLAMLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNCTVAVRSGAIRVLIDVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVLKGRCMLSKEGATEILLRLFDERVGCLSDALRLPEFLGVVADLSVRGSAKARERASLLMNKLMNTDFDTYSNADSVYSQWY
Homology
[Close]
BLAST of Lsi04G021460 vs. Swiss-Prot
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3)

HSP 1 Score: 72.8 bits (177), Expect = 7.7e-12
Identity = 84/302 (27.81%), Postives = 148/302 (49.01%), Query Frame = 1 

Query: 3   VASFHSSSSMRSMS-VTTAHKTITECISGARSDALEVQEKALQNLVTITQVSPLYRNLLV 62
           + S  S+ + R +S V T  K + E +   +S +L+ Q +A   L  + + + +   +++
Sbjct: 524 IVSAPSNETRRDLSEVETQVKKLVEEL---KSSSLDTQRQATAELRLLAKHN-MDNRIVI 583

Query: 63  QVDGSISILIALSKSSSSTIQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLISLGSPE 122
              G+I +L+ L  S+ S  Q  +++ L NLS+N + KK +A    I  L  ++  GS E
Sbjct: 584 GNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSE 643

Query: 123 TVKLSSSLICSLAMLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNC 182
             + S++ + SL+++++NK K G +G I  LV  L             +L  L     N 
Sbjct: 644 AKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENK 703

Query: 183 TVAVRSGAIRVLIDVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVLK 242
            + V+SGA+R LID+++  +   +   A+ VL  LA   EG  A+ +   I + +  V++
Sbjct: 704 AMIVQSGAVRYLIDLMDPAA--GMVDKAVAVLANLATIPEGRNAIGQEGGIPL-LVEVVE 763

Query: 243 GRCMLSKEGATEILLRLFDERVGCLSDALRLPEFLGVVADLSVRGSAKARERASLLMNKL 302
                 KE A   LL+L        +  L+      +VA LS  G+ +ARE+A  L++  
Sbjct: 764 LGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVA-LSQSGTPRAREKAQALLSYF 817

Query: 303 MN 304
            N
Sbjct: 824 RN 817

[Close]
BLAST of Lsi04G021460 vs. Swiss-Prot
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.5e-11
Identity = 74/284 (26.06%), Postives = 142/284 (50.00%), Query Frame = 1 

Query: 16  SVTTAHKTITECISGARSDALEVQEKALQNLVTITQVSPLYRNLLVQVDGSISILIALSK 75
           S ++    + + I   +S +L+ Q +A   +  + + S   R ++ + + +I  L++L  
Sbjct: 415 SSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCE-AIPSLVSLLY 474

Query: 76  SSSSTIQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLISLGSPETVKL-SSSLICSLA 135
           S+   IQ+ +++ L NLS+N + K L+A    I  L  ++  G  E  K  S++ + SL+
Sbjct: 475 STDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLS 534

Query: 136 MLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNCTVAVRSGAIRVLI 195
           ++++ K + G AG I+ LV  L   ++        +L  L   H N T  + +GA+R L+
Sbjct: 535 VIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLV 594

Query: 196 DVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVLKGRCMLSKEGATEI 255
           ++++      +   A+VVL  LA   EG  A+ +   I + +  V++      KE AT  
Sbjct: 595 ELMDPAF--GMVEKAVVVLANLATVREGKIAIGEEGGIPV-LVEVVELGSARGKENATAA 654

Query: 256 LLRLFDERVGCLSDALRLPEFLGVVADLSVRGSAKARERASLLM 299
           LL+L        ++ +R      +VA L+  G+A+ +E+A  L+
Sbjct: 655 LLQLCTHSPKFCNNVIREGVIPPLVA-LTKSGTARGKEKAQNLL 693

[Close]
BLAST of Lsi04G021460 vs. Swiss-Prot
Match: PUB15_ARATH (U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15 PE=2 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 8.5e-11
Identity = 67/278 (24.10%), Postives = 142/278 (51.08%), Query Frame = 1 

Query: 28  ISGARSDALEVQEKALQNLVTITQVSPLYRNLLVQVDGSISILIALSKSSSSTIQSLSLS 87
           +    S  LE Q ++++ +  + + +P  R L+    G+I +L+ L     S IQ  +++
Sbjct: 385 VEALSSSQLEEQRRSVKQMRLLARENPENRVLIANA-GAIPLLVQLLSYPDSGIQENAVT 444

Query: 88  ILFNLSLNHDMKKLLASMDTIYHLNTLISLGSPETVKLSSSLICSLAMLDKNKAKFGVAG 147
            L NLS++   KKL+++   I ++  ++  G+ E  + S++ + SL+MLD+NK   G++ 
Sbjct: 445 TLLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSN 504

Query: 148 TIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNCTVAVRSGAIRVLIDVVESTSVEDLAG 207
            I  LV  L    +      L +L  L     N   A+ +G ++ L+++++  ++  +  
Sbjct: 505 GIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNL-GMID 564

Query: 208 TALVVLGLLARFEEGLRALIKTDRIVISMFNVLKGRCMLSKEGATEILLRLFDERVGCLS 267
            AL +L LLA   EG +A+ +    + ++   ++     +KE AT +LL L       + 
Sbjct: 565 EALSILLLLASHPEGRQAIGQLS-FIETLVEFIRQGTPKNKECATSVLLELGSNNSSFIL 624

Query: 268 DALRLPEFLGVVADLSVRGSAKARERASLLMNKLMNTD 306
            AL+   +  +V +++  G+ +A+ +A+ L+  +  ++
Sbjct: 625 AALQFGVYEYLV-EITTSGTNRAQRKANALIQLISKSE 658

[Close]
BLAST of Lsi04G021460 vs. Swiss-Prot
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 9.5e-10
Identity = 77/301 (25.58%), Postives = 146/301 (48.50%), Query Frame = 1 

Query: 7   HSSSSMRSMSVTTAHKTITECISGARSDALEVQEKALQNLVTITQVSPLYRNLLVQVDGS 66
           +S  S R +S   +   I   +    S ++E +  A+  + ++++ S   R L+ +  G+
Sbjct: 328 NSDGSFRDLSGDMS--AIRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEA-GA 387

Query: 67  ISILIALSKSSSST-IQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLISLGSPETVKL 126
           I +L+ L  S   T  Q  +++ + NLS+    K+L+     +  +  ++  GS E  + 
Sbjct: 388 IPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEAREN 447

Query: 127 SSSLICSLAMLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNCTVAV 186
           +++ + SL++ D+NK   G +G I  LV  L   +V        +L  L  + GN   AV
Sbjct: 448 AAATLFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAV 507

Query: 187 RSGAIRVLIDVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVLKGRCM 246
           R+G ++ L+ ++  +S E +A  AL +L +LA  +    A+++ + I   + + L+    
Sbjct: 508 RAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANAIP-PLIDCLQKDQP 567

Query: 247 LSKEGATEILLRLFDERVGCLSDALRLPEF--LGVVA---DLSVRGSAKARERASLLMNK 302
            ++E A  ILL L      C  D  +L     LG V    +LS  G+ +A+ +A+ L+  
Sbjct: 568 RNRENAAAILLCL------CKRDTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLEL 618

[Close]
BLAST of Lsi04G021460 vs. Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.2e-09
Identity = 60/246 (24.39%), Postives = 118/246 (47.97%), Query Frame = 1 

Query: 65  GSISILIALSKSSSSTIQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLISLGSPETVK 124
           G+I +L+ L  S     Q  S++ L NLS+N   K  +     I  +  ++  GS E  +
Sbjct: 387 GAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNGSMEARE 446

Query: 125 LSSSLICSLAMLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNCTVA 184
            +++ + SL+++D+NK   G AG IQ L+  L             ++  L  + GN + A
Sbjct: 447 NAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRA 506

Query: 185 VRSGAIRVLIDVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVLKGRC 244
           V+ G +  L  +++      +   AL +L +L+  +EG  A+ + + I + +  +++   
Sbjct: 507 VKGGIVDPLTRLLKDAG-GGMVDEALAILAILSTNQEGKTAIAEAESIPV-LVEIIRTGS 566

Query: 245 MLSKEGATEILLRLFDERVGCLSDALRLPEFLGVVADLSVR-----GSAKARERASLLMN 304
             ++E A  IL  L      C+ +  RL     V AD++++     G+ +A+ +A+ L+ 
Sbjct: 567 PRNRENAAAILWYL------CIGNIERLNVAREVGADVALKELTENGTDRAKRKAASLLE 624

Query: 305 KLMNTD 306
            +  T+
Sbjct: 627 LIQQTE 624

[Close]
BLAST of Lsi04G021460 vs. TrEMBL
Match: A0A0A0LGP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G878830 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 1.6e-149
Identity = 292/319 (91.54%), Postives = 305/319 (95.61%), Query Frame = 1 

Query: 1   MSVASFHSSSSMRSMSVTTAHKTITECISGARSDALEVQEKALQNLVTITQVSPLYRNLL 60
           MSVASF SSSSMRSMSV TAHKTITEC++GARSDA EVQEKALQNLVTITQVSPL+RNLL
Sbjct: 1   MSVASFQSSSSMRSMSVATAHKTITECMAGARSDAHEVQEKALQNLVTITQVSPLHRNLL 60

Query: 61  VQVDGSISILIALSKSSSSTIQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLISLGSP 120
           VQVDGSIS LI LSKSSSSTIQSLSLSILFNLSLNHDMKKLLASM+TIYHLNTLISLGSP
Sbjct: 61  VQVDGSISTLIGLSKSSSSTIQSLSLSILFNLSLNHDMKKLLASMETIYHLNTLISLGSP 120

Query: 121 ETVKLSSSLICSLAMLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGN 180
           +TVKLSSSLICSLAMLDKNKAKFGVAGTIQLLVRAL VP +PAAHHLLCSLAELGQFHGN
Sbjct: 121 DTVKLSSSLICSLAMLDKNKAKFGVAGTIQLLVRALKVPNIPAAHHLLCSLAELGQFHGN 180

Query: 181 CTVAVRSGAIRVLIDVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVL 240
           CTVAVRSGAI+VLI VVESTS EDLAGTALVVLGLLARFEEGLRALIKTDRIVISM NVL
Sbjct: 181 CTVAVRSGAIQVLISVVESTSGEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMVNVL 240

Query: 241 KGRCMLSKEGATEILLRLFDERVGCLSDALRLPEFLGVVADLSVRGSAKARERASLLMNK 300
           KGRCMLSKEGATEILLRLFDE  GCLSDA +LPEF GV+ADLSVRGSAKARERASLLMNK
Sbjct: 241 KGRCMLSKEGATEILLRLFDESEGCLSDASKLPEFFGVIADLSVRGSAKARERASLLMNK 300

Query: 301 LMNTDFDTYSNADSVYSQW 320
           +MN+DFD+YSN+DSVYSQW
Sbjct: 301 IMNSDFDSYSNSDSVYSQW 319

[Close]
BLAST of Lsi04G021460 vs. TrEMBL
Match: F6H3U4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05110 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 5.3e-100
Identity = 206/306 (67.32%), Postives = 249/306 (81.37%), Query Frame = 1 

Query: 15  MSVTTAHKTITECISGARSDALEVQEKALQNLVTITQVSPLYRNLLVQVDGSISILIALS 74
           MS     +TITEC+S A+SD+ EVQ+KALQ L  IT+VSP  RNLL Q DG+I  L++LS
Sbjct: 1   MSAARIRETITECLSKAQSDSPEVQQKALQTLAYITKVSPQNRNLLAQSDGAIPALLSLS 60

Query: 75  KSSSSTIQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLI-SLGSPETVKLSSSLICSL 134
           +SS+ T+Q+LSLSILF +SLN ++K+ LA M+TIYHLN++I SL SPE+ +L+SSLICSL
Sbjct: 61  RSST-TLQALSLSILFYISLNPNLKQSLAEMETIYHLNSIILSLSSPESSRLASSLICSL 120

Query: 135 AMLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNCTVAVRSGAIRVL 194
           AMLDKNKAKFGVAGTIQ LV A+S P  PAAHHLL SLAEL +FHGNCT+AVRSGA+ VL
Sbjct: 121 AMLDKNKAKFGVAGTIQSLVTAVSDPGCPAAHHLLSSLAELVRFHGNCTLAVRSGAVPVL 180

Query: 195 IDVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVLKGRCMLSKEGATE 254
           I V +S + EDLAGT+L +LGLLARFEEGL AL KTD+IV SM +VLKGRCMLSKEGA E
Sbjct: 181 IQVAQSNNSEDLAGTSLAILGLLARFEEGLNALRKTDQIVNSMVDVLKGRCMLSKEGAAE 240

Query: 255 ILLRLFDERVGCLSDALRLPEFLGVVADLSVRGSAKARERASLLMNKLMNTDFDTYSNAD 314
           ILLRLFDE  GC+ DALRLPEF  V+ADLS+RGSA+ARE+ S LM KLM  D D Y + +
Sbjct: 241 ILLRLFDESEGCVRDALRLPEFPTVLADLSIRGSARAREKVSSLMKKLMEADMDAYGDGN 300

Query: 315 SVYSQW 320
           S++ +W
Sbjct: 301 SIFLKW 305

[Close]
BLAST of Lsi04G021460 vs. TrEMBL
Match: M5XEK4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009071mg PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 5.1e-95
Identity = 195/307 (63.52%), Postives = 248/307 (80.78%), Query Frame = 1 

Query: 15  MSVTTAHKTITECISGARS-DALEVQEKALQNLVTITQVSPLYRNLLVQVDGSISILIAL 74
           MS     + I +C+S A+S D  E ++KALQ LV+IT+VSPL RNLL   +G+I  L+ L
Sbjct: 1   MSSARVREVIRQCLSEAQSSDFHEAEQKALQTLVSITKVSPLNRNLLALTEGAIPALLTL 60

Query: 75  SKSSSSTIQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLIS-LGSPETVKLSSSLICS 134
           SKSSS  IQ LSLSILFNLSLN D+K+ LA ++TI+HLN++I+ L S E+ +++SSL+CS
Sbjct: 61  SKSSSDIIQILSLSILFNLSLNPDLKQSLADIETIHHLNSIIATLNSEESGRVASSLVCS 120

Query: 135 LAMLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNCTVAVRSGAIRV 194
           LAMLDKNKAKFGVAGTIQLLV+A++ P  PAAHHLL SLAEL +FHGNCT+AVR GA++ 
Sbjct: 121 LAMLDKNKAKFGVAGTIQLLVKAIAGPRCPAAHHLLSSLAELVRFHGNCTLAVREGAVQA 180

Query: 195 LIDVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVLKGRCMLSKEGAT 254
           LI VVEST  EDLAGT+L+VL LLARF+EGL AL KTD+IV  M +VLKGRCMLSKEGA 
Sbjct: 181 LIQVVESTDGEDLAGTSLLVLALLARFDEGLNALRKTDQIVSKMVDVLKGRCMLSKEGAA 240

Query: 255 EILLRLFDERVGCLSDALRLPEFLGVVADLSVRGSAKARERASLLMNKLMNTDFDTYSNA 314
           EILL LF+E  GC+ DALRLP+F  ++AD+SVRGSA+ARE+A+LL+ K+M+ D D+Y + 
Sbjct: 241 EILLLLFEESEGCVRDALRLPDFSTLIADISVRGSARAREKAALLLKKIMDADLDSYVDG 300

Query: 315 DSVYSQW 320
           + ++SQW
Sbjct: 301 NPMFSQW 307

[Close]
BLAST of Lsi04G021460 vs. TrEMBL
Match: A0A061GPI3_THECC (RING/U-box superfamily protein with ARM repeat domain OS=Theobroma cacao GN=TCM_038376 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.6e-93
Identity = 195/306 (63.73%), Postives = 240/306 (78.43%), Query Frame = 1 

Query: 15  MSVTTAHKTITECISGARSDALEVQEKALQNLVTITQVSPLYRNLLVQVDGSISILIALS 74
           MS     +T+ E +  A+SD+ EVQ+K+LQ L +IT+VSP  R LL Q +G+IS L+ LS
Sbjct: 1   MSTVRVRETLLEYLFEAQSDSHEVQQKSLQTLASITKVSPQNRTLLAQTNGAISALLTLS 60

Query: 75  KSSSSTIQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLI-SLGSPETVKLSSSLICSL 134
           KSSS  IQ+LSLSILFNLSLN D+K+ LA M+TI HLN++I S  SPE+ KL+SSL+CSL
Sbjct: 61  KSSSPIIQTLSLSILFNLSLNPDLKQSLADMETINHLNSIILSPSSPESSKLASSLVCSL 120

Query: 135 AMLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNCTVAVRSGAIRVL 194
           AMLDKNKAKFGVAGT++LLV  +S P  PAAHHLL SLAEL QFHGNCT+AVR+GA+ VL
Sbjct: 121 AMLDKNKAKFGVAGTVRLLVNTVSGPRSPAAHHLLSSLAELVQFHGNCTLAVRAGAVPVL 180

Query: 195 IDVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVLKGRCMLSKEGATE 254
           I +V ST  EDLAGT+L +LGLLARF+EGL AL KT+++V SM +VLKGRCMLSKEGA E
Sbjct: 181 IQLVTSTDGEDLAGTSLAILGLLARFDEGLNALKKTNQVVSSMVDVLKGRCMLSKEGAAE 240

Query: 255 ILLRLFDERVGCLSDALRLPEFLGVVADLSVRGSAKARERASLLMNKLMNTDFDTYSNAD 314
           ILL L DE   CL DALRLPEF  V+AD+SVRGSA+ARE+A  L+ K+M  + D+YS+  
Sbjct: 241 ILLLLLDESEDCLRDALRLPEFFTVLADISVRGSARAREKAGQLLKKMMEANLDSYSDGH 300

Query: 315 SVYSQW 320
           S   +W
Sbjct: 301 SSIFEW 306

[Close]
BLAST of Lsi04G021460 vs. TrEMBL
Match: B9HA24_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s26720g PE=4 SV=2)

HSP 1 Score: 350.5 bits (898), Expect = 2.1e-93
Identity = 193/288 (67.01%), Postives = 233/288 (80.90%), Query Frame = 1 

Query: 15  MSVTTAHKTITECISGARSDALEVQEKALQNLVTITQVSPLYRNLLVQVDGSISILIALS 74
           MS T   +TITEC++  +SD+++ Q KALQ L ++T+VSP  R+LL Q DG +S L+ L+
Sbjct: 1   MSATRLRETITECLADVQSDSVDAQRKALQTLASLTKVSPQNRSLLAQTDGVVSTLLTLT 60

Query: 75  KSSSSTIQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLI-SLGSPETVKLSSSLICSL 134
           K SSS I+ L+LSILFNLSLN D+K  LA M+TI+HLN++I S  SPE  +L  SLICSL
Sbjct: 61  KISSSIIRILALSILFNLSLNPDLKWNLADMETIHHLNSIILSASSPEINRLVCSLICSL 120

Query: 135 AMLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNCTVAVRSGAIRVL 194
           AMLDKNKAKFGVAGT+Q+LV A+S P  PA+HHLL SLAEL QFHGNCTVAVRSGA++VL
Sbjct: 121 AMLDKNKAKFGVAGTVQVLVGAISGPRCPASHHLLSSLAELVQFHGNCTVAVRSGAVQVL 180

Query: 195 IDVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVLKGRCMLSKEGATE 254
           I VVEST  EDLAGT+L VLG LARF EGL ALI+TD+IV SM NVL+GRCMLSKEGA E
Sbjct: 181 IGVVESTDGEDLAGTSLAVLGHLARFNEGLNALIRTDQIVSSMLNVLRGRCMLSKEGAAE 240

Query: 255 ILLRLFDERVGCLSDALRLPEFLGVVADLSVRGSAKARERASLLMNKL 302
           ILLRLFDE  GC+ DA RLPEF  V+AD+SVRGS+KARE+A+ L+ K+
Sbjct: 241 ILLRLFDESEGCVRDAFRLPEFSSVLADISVRGSSKAREKANQLLKKM 288

[Close]
BLAST of Lsi04G021460 vs. TAIR10
Match: AT2G23140.1 (AT2G23140.1 RING/U-box superfamily protein with ARM repeat domain)

HSP 1 Score: 72.8 bits (177), Expect = 4.4e-13
Identity = 84/302 (27.81%), Postives = 148/302 (49.01%), Query Frame = 1 

Query: 3   VASFHSSSSMRSMS-VTTAHKTITECISGARSDALEVQEKALQNLVTITQVSPLYRNLLV 62
           + S  S+ + R +S V T  K + E +   +S +L+ Q +A   L  + + + +   +++
Sbjct: 527 IVSAPSNETRRDLSEVETQVKKLVEEL---KSSSLDTQRQATAELRLLAKHN-MDNRIVI 586

Query: 63  QVDGSISILIALSKSSSSTIQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLISLGSPE 122
              G+I +L+ L  S+ S  Q  +++ L NLS+N + KK +A    I  L  ++  GS E
Sbjct: 587 GNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSE 646

Query: 123 TVKLSSSLICSLAMLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNC 182
             + S++ + SL+++++NK K G +G I  LV  L             +L  L     N 
Sbjct: 647 AKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENK 706

Query: 183 TVAVRSGAIRVLIDVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVLK 242
            + V+SGA+R LID+++  +   +   A+ VL  LA   EG  A+ +   I + +  V++
Sbjct: 707 AMIVQSGAVRYLIDLMDPAA--GMVDKAVAVLANLATIPEGRNAIGQEGGIPL-LVEVVE 766

Query: 243 GRCMLSKEGATEILLRLFDERVGCLSDALRLPEFLGVVADLSVRGSAKARERASLLMNKL 302
                 KE A   LL+L        +  L+      +VA LS  G+ +ARE+A  L++  
Sbjct: 767 LGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVA-LSQSGTPRAREKAQALLSYF 820

Query: 303 MN 304
            N
Sbjct: 827 RN 820

[Close]
BLAST of Lsi04G021460 vs. TAIR10
Match: AT5G67340.1 (AT5G67340.1 ARM repeat superfamily protein)

HSP 1 Score: 69.7 bits (169), Expect = 3.7e-12
Identity = 74/284 (26.06%), Postives = 142/284 (50.00%), Query Frame = 1 

Query: 16  SVTTAHKTITECISGARSDALEVQEKALQNLVTITQVSPLYRNLLVQVDGSISILIALSK 75
           S ++    + + I   +S +L+ Q +A   +  + + S   R ++ + + +I  L++L  
Sbjct: 415 SSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCE-AIPSLVSLLY 474

Query: 76  SSSSTIQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLISLGSPETVKL-SSSLICSLA 135
           S+   IQ+ +++ L NLS+N + K L+A    I  L  ++  G  E  K  S++ + SL+
Sbjct: 475 STDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLS 534

Query: 136 MLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNCTVAVRSGAIRVLI 195
           ++++ K + G AG I+ LV  L   ++        +L  L   H N T  + +GA+R L+
Sbjct: 535 VIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLV 594

Query: 196 DVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVLKGRCMLSKEGATEI 255
           ++++      +   A+VVL  LA   EG  A+ +   I + +  V++      KE AT  
Sbjct: 595 ELMDPAF--GMVEKAVVVLANLATVREGKIAIGEEGGIPV-LVEVVELGSARGKENATAA 654

Query: 256 LLRLFDERVGCLSDALRLPEFLGVVADLSVRGSAKARERASLLM 299
           LL+L        ++ +R      +VA L+  G+A+ +E+A  L+
Sbjct: 655 LLQLCTHSPKFCNNVIREGVIPPLVA-LTKSGTARGKEKAQNLL 693

[Close]
BLAST of Lsi04G021460 vs. TAIR10
Match: AT5G42340.1 (AT5G42340.1 Plant U-Box 15)

HSP 1 Score: 69.3 bits (168), Expect = 4.8e-12
Identity = 67/278 (24.10%), Postives = 142/278 (51.08%), Query Frame = 1 

Query: 28  ISGARSDALEVQEKALQNLVTITQVSPLYRNLLVQVDGSISILIALSKSSSSTIQSLSLS 87
           +    S  LE Q ++++ +  + + +P  R L+    G+I +L+ L     S IQ  +++
Sbjct: 385 VEALSSSQLEEQRRSVKQMRLLARENPENRVLIANA-GAIPLLVQLLSYPDSGIQENAVT 444

Query: 88  ILFNLSLNHDMKKLLASMDTIYHLNTLISLGSPETVKLSSSLICSLAMLDKNKAKFGVAG 147
            L NLS++   KKL+++   I ++  ++  G+ E  + S++ + SL+MLD+NK   G++ 
Sbjct: 445 TLLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSN 504

Query: 148 TIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNCTVAVRSGAIRVLIDVVESTSVEDLAG 207
            I  LV  L    +      L +L  L     N   A+ +G ++ L+++++  ++  +  
Sbjct: 505 GIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNL-GMID 564

Query: 208 TALVVLGLLARFEEGLRALIKTDRIVISMFNVLKGRCMLSKEGATEILLRLFDERVGCLS 267
            AL +L LLA   EG +A+ +    + ++   ++     +KE AT +LL L       + 
Sbjct: 565 EALSILLLLASHPEGRQAIGQLS-FIETLVEFIRQGTPKNKECATSVLLELGSNNSSFIL 624

Query: 268 DALRLPEFLGVVADLSVRGSAKARERASLLMNKLMNTD 306
            AL+   +  +V +++  G+ +A+ +A+ L+  +  ++
Sbjct: 625 AALQFGVYEYLV-EITTSGTNRAQRKANALIQLISKSE 658

[Close]
BLAST of Lsi04G021460 vs. TAIR10
Match: AT1G71020.1 (AT1G71020.1 ARM repeat superfamily protein)

HSP 1 Score: 65.9 bits (159), Expect = 5.3e-11
Identity = 77/301 (25.58%), Postives = 146/301 (48.50%), Query Frame = 1 

Query: 7   HSSSSMRSMSVTTAHKTITECISGARSDALEVQEKALQNLVTITQVSPLYRNLLVQVDGS 66
           +S  S R +S   +   I   +    S ++E +  A+  + ++++ S   R L+ +  G+
Sbjct: 328 NSDGSFRDLSGDMS--AIRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEA-GA 387

Query: 67  ISILIALSKSSSST-IQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLISLGSPETVKL 126
           I +L+ L  S   T  Q  +++ + NLS+    K+L+     +  +  ++  GS E  + 
Sbjct: 388 IPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEAREN 447

Query: 127 SSSLICSLAMLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNCTVAV 186
           +++ + SL++ D+NK   G +G I  LV  L   +V        +L  L  + GN   AV
Sbjct: 448 AAATLFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAV 507

Query: 187 RSGAIRVLIDVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVLKGRCM 246
           R+G ++ L+ ++  +S E +A  AL +L +LA  +    A+++ + I   + + L+    
Sbjct: 508 RAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANAIP-PLIDCLQKDQP 567

Query: 247 LSKEGATEILLRLFDERVGCLSDALRLPEF--LGVVA---DLSVRGSAKARERASLLMNK 302
            ++E A  ILL L      C  D  +L     LG V    +LS  G+ +A+ +A+ L+  
Sbjct: 568 RNRENAAAILLCL------CKRDTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLEL 618

[Close]
BLAST of Lsi04G021460 vs. TAIR10
Match: AT3G54850.1 (AT3G54850.1 plant U-box 14)

HSP 1 Score: 65.5 bits (158), Expect = 7.0e-11
Identity = 60/246 (24.39%), Postives = 118/246 (47.97%), Query Frame = 1 

Query: 65  GSISILIALSKSSSSTIQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLISLGSPETVK 124
           G+I +L+ L  S     Q  S++ L NLS+N   K  +     I  +  ++  GS E  +
Sbjct: 387 GAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNGSMEARE 446

Query: 125 LSSSLICSLAMLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNCTVA 184
            +++ + SL+++D+NK   G AG IQ L+  L             ++  L  + GN + A
Sbjct: 447 NAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRA 506

Query: 185 VRSGAIRVLIDVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVLKGRC 244
           V+ G +  L  +++      +   AL +L +L+  +EG  A+ + + I + +  +++   
Sbjct: 507 VKGGIVDPLTRLLKDAG-GGMVDEALAILAILSTNQEGKTAIAEAESIPV-LVEIIRTGS 566

Query: 245 MLSKEGATEILLRLFDERVGCLSDALRLPEFLGVVADLSVR-----GSAKARERASLLMN 304
             ++E A  IL  L      C+ +  RL     V AD++++     G+ +A+ +A+ L+ 
Sbjct: 567 PRNRENAAAILWYL------CIGNIERLNVAREVGADVALKELTENGTDRAKRKAASLLE 624

Query: 305 KLMNTD 306
            +  T+
Sbjct: 627 LIQQTE 624

[Close]
BLAST of Lsi04G021460 vs. NCBI nr
Match: gi|449437384|ref|XP_004136472.1| (PREDICTED: U-box domain-containing protein 8-like [Cucumis sativus])

HSP 1 Score: 537.0 bits (1382), Expect = 2.3e-149
Identity = 292/319 (91.54%), Postives = 305/319 (95.61%), Query Frame = 1 

Query: 1   MSVASFHSSSSMRSMSVTTAHKTITECISGARSDALEVQEKALQNLVTITQVSPLYRNLL 60
           MSVASF SSSSMRSMSV TAHKTITEC++GARSDA EVQEKALQNLVTITQVSPL+RNLL
Sbjct: 1   MSVASFQSSSSMRSMSVATAHKTITECMAGARSDAHEVQEKALQNLVTITQVSPLHRNLL 60

Query: 61  VQVDGSISILIALSKSSSSTIQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLISLGSP 120
           VQVDGSIS LI LSKSSSSTIQSLSLSILFNLSLNHDMKKLLASM+TIYHLNTLISLGSP
Sbjct: 61  VQVDGSISTLIGLSKSSSSTIQSLSLSILFNLSLNHDMKKLLASMETIYHLNTLISLGSP 120

Query: 121 ETVKLSSSLICSLAMLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGN 180
           +TVKLSSSLICSLAMLDKNKAKFGVAGTIQLLVRAL VP +PAAHHLLCSLAELGQFHGN
Sbjct: 121 DTVKLSSSLICSLAMLDKNKAKFGVAGTIQLLVRALKVPNIPAAHHLLCSLAELGQFHGN 180

Query: 181 CTVAVRSGAIRVLIDVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVL 240
           CTVAVRSGAI+VLI VVESTS EDLAGTALVVLGLLARFEEGLRALIKTDRIVISM NVL
Sbjct: 181 CTVAVRSGAIQVLISVVESTSGEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMVNVL 240

Query: 241 KGRCMLSKEGATEILLRLFDERVGCLSDALRLPEFLGVVADLSVRGSAKARERASLLMNK 300
           KGRCMLSKEGATEILLRLFDE  GCLSDA +LPEF GV+ADLSVRGSAKARERASLLMNK
Sbjct: 241 KGRCMLSKEGATEILLRLFDESEGCLSDASKLPEFFGVIADLSVRGSAKARERASLLMNK 300

Query: 301 LMNTDFDTYSNADSVYSQW 320
           +MN+DFD+YSN+DSVYSQW
Sbjct: 301 IMNSDFDSYSNSDSVYSQW 319

[Close]
BLAST of Lsi04G021460 vs. NCBI nr
Match: gi|659132793|ref|XP_008466387.1| (PREDICTED: U-box domain-containing protein 15-like isoform X1 [Cucumis melo])

HSP 1 Score: 532.7 bits (1371), Expect = 4.4e-148
Identity = 291/319 (91.22%), Postives = 302/319 (94.67%), Query Frame = 1 

Query: 1   MSVASFHSSSSMRSMSVTTAHKTITECISGARSDALEVQEKALQNLVTITQVSPLYRNLL 60
           MSVASF SSSSMRSMSV TAHKTITECI+GARSDA EVQEKALQNLVT+TQVSPL+RNLL
Sbjct: 1   MSVASFQSSSSMRSMSVATAHKTITECIAGARSDAHEVQEKALQNLVTVTQVSPLHRNLL 60

Query: 61  VQVDGSISILIALSKSSSSTIQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLISLGSP 120
           VQVDGSISILI LSKSS ST+QSLSLSILFNLSLNHDMKKLLASM+ IYHLNTLISLGSP
Sbjct: 61  VQVDGSISILIDLSKSSFSTVQSLSLSILFNLSLNHDMKKLLASMENIYHLNTLISLGSP 120

Query: 121 ETVKLSSSLICSLAMLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGN 180
           ETVKLS+SLICSLAMLDKNKAKFGVAGTIQLLVRAL VP +PAAHHLLCSLAELGQFHGN
Sbjct: 121 ETVKLSASLICSLAMLDKNKAKFGVAGTIQLLVRALKVPNIPAAHHLLCSLAELGQFHGN 180

Query: 181 CTVAVRSGAIRVLIDVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVL 240
           CTVAVRSGAI+VLI VVES S EDLAGTALVVLGLLARFEEGLRALIKTDRIVISM NVL
Sbjct: 181 CTVAVRSGAIQVLIGVVESASGEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMVNVL 240

Query: 241 KGRCMLSKEGATEILLRLFDERVGCLSDALRLPEFLGVVADLSVRGSAKARERASLLMNK 300
           KGRCMLSKEGATEILLRLFDE   CLSDAL+LPEF GVVADLSVRGS KARERASLLMNK
Sbjct: 241 KGRCMLSKEGATEILLRLFDESEDCLSDALKLPEFFGVVADLSVRGSPKARERASLLMNK 300

Query: 301 LMNTDFDTYSNADSVYSQW 320
           +MN+DFDTYSNADSVYSQW
Sbjct: 301 IMNSDFDTYSNADSVYSQW 319

[Close]
BLAST of Lsi04G021460 vs. NCBI nr
Match: gi|659132795|ref|XP_008466388.1| (PREDICTED: U-box domain-containing protein 15-like isoform X2 [Cucumis melo])

HSP 1 Score: 518.8 bits (1335), Expect = 6.5e-144
Identity = 281/308 (91.23%), Postives = 292/308 (94.81%), Query Frame = 1 

Query: 12  MRSMSVTTAHKTITECISGARSDALEVQEKALQNLVTITQVSPLYRNLLVQVDGSISILI 71
           MRSMSV TAHKTITECI+GARSDA EVQEKALQNLVT+TQVSPL+RNLLVQVDGSISILI
Sbjct: 1   MRSMSVATAHKTITECIAGARSDAHEVQEKALQNLVTVTQVSPLHRNLLVQVDGSISILI 60

Query: 72  ALSKSSSSTIQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLISLGSPETVKLSSSLIC 131
            LSKSS ST+QSLSLSILFNLSLNHDMKKLLASM+ IYHLNTLISLGSPETVKLS+SLIC
Sbjct: 61  DLSKSSFSTVQSLSLSILFNLSLNHDMKKLLASMENIYHLNTLISLGSPETVKLSASLIC 120

Query: 132 SLAMLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNCTVAVRSGAIR 191
           SLAMLDKNKAKFGVAGTIQLLVRAL VP +PAAHHLLCSLAELGQFHGNCTVAVRSGAI+
Sbjct: 121 SLAMLDKNKAKFGVAGTIQLLVRALKVPNIPAAHHLLCSLAELGQFHGNCTVAVRSGAIQ 180

Query: 192 VLIDVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVLKGRCMLSKEGA 251
           VLI VVES S EDLAGTALVVLGLLARFEEGLRALIKTDRIVISM NVLKGRCMLSKEGA
Sbjct: 181 VLIGVVESASGEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMVNVLKGRCMLSKEGA 240

Query: 252 TEILLRLFDERVGCLSDALRLPEFLGVVADLSVRGSAKARERASLLMNKLMNTDFDTYSN 311
           TEILLRLFDE   CLSDAL+LPEF GVVADLSVRGS KARERASLLMNK+MN+DFDTYSN
Sbjct: 241 TEILLRLFDESEDCLSDALKLPEFFGVVADLSVRGSPKARERASLLMNKIMNSDFDTYSN 300

Query: 312 ADSVYSQW 320
           ADSVYSQW
Sbjct: 301 ADSVYSQW 308

[Close]
BLAST of Lsi04G021460 vs. NCBI nr
Match: gi|1009137199|ref|XP_015885925.1| (PREDICTED: vacuolar protein 8-like [Ziziphus jujuba])

HSP 1 Score: 364.4 bits (934), Expect = 2.1e-97
Identity = 201/306 (65.69%), Postives = 246/306 (80.39%), Query Frame = 1 

Query: 15  MSVTTAHKTITECISGARSDALEVQEKALQNLVTITQVSPLYRNLLVQVDGSISILIALS 74
           MS      TI++C+S A+ D+ EVQ+KAL+ LV+IT+VSP  RNLL + +G+I + + LS
Sbjct: 1   MSAVRILDTISQCLSEAQLDSHEVQQKALKTLVSITKVSPKNRNLLAETEGAIPVFLNLS 60

Query: 75  KSSSSTIQSLSLSILFNLSLNHDMKKLLASMDTIYHLNT-LISLGSPETVKLSSSLICSL 134
           KSS S IQ+LSLSILFNLSLN ++K+ LA +  IYHLN+ L+S  SPE+ +L+SSL+CSL
Sbjct: 61  KSSDSIIQTLSLSILFNLSLNPNLKQSLAEIQNIYHLNSVLVSPNSPESSRLASSLVCSL 120

Query: 135 AMLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNCTVAVRSGAIRVL 194
           AMLDKNKAKFGVAGT+QLLV+A+S P  PAAHHLL SLAEL QFHGNCT+AVR+GA+ VL
Sbjct: 121 AMLDKNKAKFGVAGTVQLLVKAVSGPHGPAAHHLLSSLAELVQFHGNCTLAVRAGAVPVL 180

Query: 195 IDVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVLKGRCMLSKEGATE 254
           I VV+ST  EDLAGT+L VL LL RF EGL AL KTD IV  M +VL+GRCMLSKEGA+E
Sbjct: 181 IQVVKSTDGEDLAGTSLAVLCLLVRFNEGLNALRKTDGIVSLMVDVLRGRCMLSKEGASE 240

Query: 255 ILLRLFDERVGCLSDALRLPEFLGVVADLSVRGSAKARERASLLMNKLMNTDFDTYSNAD 314
           IL+RLFDE  GC+ DALRLPEF  V+ADLSVRGSAKARERASLLM K+M+ + DTY +  
Sbjct: 241 ILIRLFDESEGCVRDALRLPEFANVLADLSVRGSAKARERASLLMRKMMDAELDTYVDGS 300

Query: 315 SVYSQW 320
            ++ QW
Sbjct: 301 PMFFQW 306

[Close]
BLAST of Lsi04G021460 vs. NCBI nr
Match: gi|764542286|ref|XP_011459209.1| (PREDICTED: U-box domain-containing protein 14-like isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 361.3 bits (926), Expect = 1.7e-96
Identity = 199/306 (65.03%), Postives = 245/306 (80.07%), Query Frame = 1 

Query: 14  SMSVTTAHKTITECISGARSDALEVQEKALQNLVTITQVSPLYRNLLVQVDGSISILIAL 73
           SMS       I   +S A+SD+ EVQ+KALQ L +IT+VSP  RNLL Q +G++  L+AL
Sbjct: 12  SMSAVRIRAAIRAALSEAQSDSDEVQQKALQTLASITKVSPQNRNLLAQTEGAVPSLLAL 71

Query: 74  SKSSSSTIQSLSLSILFNLSLNHDMKKLLASMDTIYHLNTLISLGSPETVKLSSSLICSL 133
           S+SSSS  Q+L+LSILFNLSLN D+K  LA ++TIYHLNT+IS    E+ KL+SSL+CSL
Sbjct: 72  SESSSSITQNLALSILFNLSLNLDLKLSLADLETIYHLNTIIS-DPTESGKLASSLVCSL 131

Query: 134 AMLDKNKAKFGVAGTIQLLVRALSVPAVPAAHHLLCSLAELGQFHGNCTVAVRSGAIRVL 193
           AMLDKNKAKFGVAGTIQLLV+A+S P  PAAHH+L SLAEL +FHGNCTVAVR GA+  L
Sbjct: 132 AMLDKNKAKFGVAGTIQLLVKAISGPRGPAAHHILSSLAELVRFHGNCTVAVREGAVPAL 191

Query: 194 IDVVESTSVEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMFNVLKGRCMLSKEGATE 253
           + VVES   EDLAGT+L+VLGLLARF+EGL AL KTD+IV SM  VLKGRCMLSKEGA E
Sbjct: 192 LQVVESPDGEDLAGTSLLVLGLLARFDEGLSALSKTDQIVSSMVQVLKGRCMLSKEGAAE 251

Query: 254 ILLRLFDERVGCLSDALRLPEFLGVVADLSVRGSAKARERASLLMNKLMNTDFDTYSNAD 313
           +LL LFDE  GC+ DALRL +F  +VAD+SVRGSA+ARE+A+LLM K+M+ D D+Y++ +
Sbjct: 252 LLLLLFDESEGCVRDALRLQDFSSLVADISVRGSARAREKAALLMKKMMDADMDSYADGN 311

Query: 314 SVYSQW 320
            ++SQW
Sbjct: 312 PMFSQW 316

The following BLAST results are available for this feature:
BLAST of Lsi04G021460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PUB4_ARATH7.7e-1227.81U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3[more]
PUB2_ARATH6.5e-1126.06U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1[more]
PUB15_ARATH8.5e-1124.10U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15 PE=2 SV=2[more]
PUB10_ARATH9.5e-1025.58U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1[more]
PUB14_ARATH1.2e-0924.39U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1[more]
BLAST of Lsi04G021460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGP7_CUCSA1.6e-14991.54Uncharacterized protein OS=Cucumis sativus GN=Csa_3G878830 PE=4 SV=1[more]
F6H3U4_VITVI5.3e-10067.32Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05110 PE=4 SV=... [more]
M5XEK4_PRUPE5.1e-9563.52Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009071mg PE=4 SV=1[more]
A0A061GPI3_THECC1.6e-9363.73RING/U-box superfamily protein with ARM repeat domain OS=Theobroma cacao GN=TCM_... [more]
B9HA24_POPTR2.1e-9367.01Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s26720g PE=4 SV=2[more]
BLAST of Lsi04G021460 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G23140.14.4e-1327.81 RING/U-box superfamily protein with ARM repeat domain[more]
AT5G67340.13.7e-1226.06 ARM repeat superfamily protein[more]
AT5G42340.14.8e-1224.10 Plant U-Box 15[more]
AT1G71020.15.3e-1125.58 ARM repeat superfamily protein[more]
AT3G54850.17.0e-1124.39 plant U-box 14[more]
BLAST of Lsi04G021460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437384|ref|XP_004136472.1|2.3e-14991.54PREDICTED: U-box domain-containing protein 8-like [Cucumis sativus][more]
gi|659132793|ref|XP_008466387.1|4.4e-14891.22PREDICTED: U-box domain-containing protein 15-like isoform X1 [Cucumis melo][more]
gi|659132795|ref|XP_008466388.1|6.5e-14491.23PREDICTED: U-box domain-containing protein 15-like isoform X2 [Cucumis melo][more]
gi|1009137199|ref|XP_015885925.1|2.1e-9765.69PREDICTED: vacuolar protein 8-like [Ziziphus jujuba][more]
gi|764542286|ref|XP_011459209.1|1.7e-9665.03PREDICTED: U-box domain-containing protein 14-like isoform X1 [Fragaria vesca su... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0005488 binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G021460.1Lsi04G021460.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3DG3DSA:1.25.10.10coord: 26..258
score: 1.2
IPR016024Armadillo-type foldunknownSSF48371ARM repeatcoord: 23..302
score: 5.76
NoneNo IPR availablePANTHERPTHR23315BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAININGcoord: 23..302
score: 5.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi04G021460Csa3G878830Cucumber (Chinese Long) v2culsiB191
Lsi04G021460CSPI03G44100Wild cucumber (PI 183967)cpilsiB189
Lsi04G021460Cucsa.310480Cucumber (Gy14) v1cgylsiB503
Lsi04G021460CmoCh01G015490Cucurbita moschata (Rifu)cmolsiB423
Lsi04G021460Cla020956Watermelon (97103) v1lsiwmB313
Lsi04G021460MELO3C003683Melon (DHL92) v3.5.1lsimeB310
Lsi04G021460ClCG05G017080Watermelon (Charleston Gray)lsiwcgB284
Lsi04G021460MELO3C003683.2Melon (DHL92) v3.6.1lsimedB324
Lsi04G021460Cla97C05G098190Watermelon (97103) v2lsiwmbB285
Lsi04G021460Cp4.1LG02g04110Cucurbita pepo (Zucchini)cpelsiB457
Lsi04G021460Carg00441Silver-seed gourdcarlsiB611
Lsi04G021460CsaV3_3G046560Cucumber (Chinese Long) v3cuclsiB208
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G021460Wax gourdlsiwgoB393
Lsi04G021460Cucumber (Gy14) v1cgylsiB264
Lsi04G021460Cucurbita maxima (Rimu)cmalsiB022
Lsi04G021460Cucurbita maxima (Rimu)cmalsiB120
Lsi04G021460Cucurbita maxima (Rimu)cmalsiB171
Lsi04G021460Cucurbita maxima (Rimu)cmalsiB176
Lsi04G021460Cucurbita maxima (Rimu)cmalsiB425
Lsi04G021460Cucurbita maxima (Rimu)cmalsiB433
Lsi04G021460Cucurbita maxima (Rimu)cmalsiB727
Lsi04G021460Cucurbita moschata (Rifu)cmolsiB010
Lsi04G021460Cucurbita moschata (Rifu)cmolsiB109
Lsi04G021460Cucurbita moschata (Rifu)cmolsiB161
Lsi04G021460Cucurbita moschata (Rifu)cmolsiB164
Lsi04G021460Cucurbita moschata (Rifu)cmolsiB413
Lsi04G021460Cucurbita moschata (Rifu)cmolsiB720
Lsi04G021460Cucurbita pepo (Zucchini)cpelsiB087
Lsi04G021460Cucurbita pepo (Zucchini)cpelsiB551
Lsi04G021460Cucurbita pepo (Zucchini)cpelsiB636
Lsi04G021460Cucurbita pepo (Zucchini)cpelsiB678
Lsi04G021460Melon (DHL92) v3.5.1lsimeB298
Lsi04G021460Watermelon (Charleston Gray)lsiwcgB306
Lsi04G021460Watermelon (97103) v1lsiwmB294
Lsi04G021460Cucumber (Gy14) v2cgyblsiB175
Lsi04G021460Silver-seed gourdcarlsiB126
Lsi04G021460Silver-seed gourdcarlsiB575
Lsi04G021460Silver-seed gourdcarlsiB606
Lsi04G021460Silver-seed gourdcarlsiB895
Lsi04G021460Cucumber (Chinese Long) v3cuclsiB135