Lsi04G014160 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGGAACCGATTTGTTTAACGTTGGCCGCCGCCGCCGGCAACAATATCGGCAAAATACTTCAGAAGAAGGGCACCGTTATTCTTCCTCCTCTTTCTTTCAAGCTCAAGGTACGTTTTCTCCTCTTCTCTCTGTTACCGTTGTTTTTCTTTTCACATTTCCTTCTAGGTCATTTAATTTCATGCGATTCGTTTTCTTTTTCTCCGATCGCTAGTTGTATTCTGTTTCTTTGATGTTGATCTTATTTAAATTTCAATTTCTCGAATTTGATTGGGGATTTGACCGAACATTCCCGGATTTTATTCTGATTATAAACTCTTTCTTTCTGCGAATTCCTTGAATGAAGTTGATGAATTCTCTCTGGTTGTTTGTGTTATATAGGTGATAAGGGCTTACGCTTTTAACAAAATTTGGATAATTGGTTTCCTGATGGATATATTTGGAGCCGTTTTAATGTTGAGAGCGCTATCCCTCGCCCCTGTAAGTCCTTTTATTCAGCTACATACGCCATGTTCTTTTTTGGTTGGCATTGGATGATTGGATCTTGGCATTATTGAGCGCCTAGGCTGTTTTTTTCTGAGATCTAGATGAATTTGGCGCGCCTAGTCTGTTTTTGCTGTTTTGATGGCTATCTGACTACTCTTTGTCGTATTTCTTATATCATATCTATTTCAATGGAAATAACATGTAATCTAAGATTCTAAATATTTCATCTCTAATTTGATGTTACAAAACCATTTTATAGATTACTTTTTTCCCAAGAATCCGTACCTCACAGGAAAATTTATACGGTTCTGTCAATGTATGTTGTTGCGCGCATTTTCTTCTCTGCATGTCCTTTCTAATTTCTGTTTTTCAGGTTTCTATAATTCAACCAGTTTCTGGGTGTGGACTTGCCATCCTCTCTATATTTTCACATTTTTATCTGAAGGAAATTATGAATGCCGTTGATTGGATGGGGATTATGCTTGCTGGCATTGGCACCATAGGTAACGTAAGTTCATCTTTGTGTCTATAATCTAGTTATTGTTTAATCTTTTTTTTGTTTTTTTTTTTTTTTCACTTTCTTGTCTTTAAATGTTTATTTTATGCATTTCAGGGTTGGTCTTGTCTTGTATCTCAACTTTTTGTGAATCTTCATCTTCCTTGCATGCTTTTGTAATTTACTTGGCCCCCTTTTTTTTTTTTTTGTTTTTTTTTTTTTCACTTTCTTGTCTTTAAATGTTTATTTTATGCATTTCAGGGTTGGTCTTGTCTTGTATCTCAACTTTTTGTGAATCTTCATCTTCCTTGCATGCTTTTGTAATTTACTTGGCCCCCTTTTTTTTTTTTGGATTTTTTTCATTCCAAGGGGTTGGTGCTGGAGGTGAGGAGCAAAAGGCCTCTGCGATATCAGTTTTTCATCTGCCATGGCTAGCATTCATCATGACCATCTTGTTTGTAGGTATCTTATATTATTATAACCTGAAATTTTGTAAAAATCTCTGGCCATGTAAACTAGATAAGGCCTTTTATGTTAGAAGTTTTATGGTCTTGCTTGCAGAAACAAATATGACTTACTAGTACTTTGTAAATTGAGCTGTAAAAGATGAATGTACTGACATCTAGGAATGATTGGGTTCGATGTATATTTTTACAGGTTCTTCTAAATGGATGGCTTCATTTCTACAAACGTCAAAGGAGAGAACAGGAGTTGGTAAATTCATTGCTTTTATATTGACATGTCAATCGTTTTCTTGTCCTCCCAAAAAAGTAATATGCTAGATATGTATATATGTTGCAGATGGAATTTGAAGTTGTTGAAGAAATAATATATGGCTTGGAATCTGGCATTTTGTTTGGGTAAATGTTCTGGCTTGCACTCTTTTGCTTGATGGATTACATTTCCTGCGATCATTAAGGTTGAGGATGACTATTAGGAATTAGAACTTTGCTTCACTGTGAGAAATTATGGCGCCTGCCTGATTGGGGTTGTATCCTAGTTTGTTTTAAATTGAATCTTAGCCAGCTTTTATTTTGACGTTCAGGTAGGATGGACTAGACAATGAAAAGAGGAATTTTGAATAATCATTGTTATGGTGTTCTGTACAATGTTGAAGTGTCCATGATGTTTGAGGGCTGGAACATAAGCATACCATAGAATTGTTAAGTCTTTTACGTGGCATTAATACAGAGAACTATTTCCATGCAACGCGTTGAAAGGGAAATGATCCAATTGGCTTTTAGATTCATAATAGCAAAAGTTCACAAGTTAAATCTGCAATTGCAGGATGGCGTCTGTAATATCAAAGATGGGATTCTTATTCTTGGAGCAGGGATTCCACGAAATATTGGTTCCCATATGCATCCTGATAAGTATTTGTTGCAGTGCTACAGGATTTTACTATCAGGTGATTTGATCTCTTTACGATTTTGTTTTGCATTTATTGACAGATTTTGTATTAATGCAATTGCAGTAATGTTCATTGTTTTATTGACAGCTTTTGCCTGTGTTCTTCTAGTTCATAATAATGTTGTCTTTTCTTTTTTAGTAGACTCGAGGACTAAAACATGGGAGGGCAATTGTGGTGTCTACATGTGCTGCCGTGGCATCCATCGTCACTGGTGTTGTTGCTGGCATGCTTGCTCTGGGTGAAGAATTGCCGTCGTCACCAACTGGTCGCCTTCTCCTTCTGTTGGGATGGTAAACTAGAAATATATACCCGCCCTATGTATTCCACATCACTACCTTGACTTGATAAAGAAAAGCTATAGTTACCTTTCGAGTTTACGATTAACTGACGACAGGACTTGTTATGAAGCTCTGGCGATAGAGTTAGAAGTTTGGTATATATACGTTGTGTTTATCGGCCTATGTGGGTTAATGTTATTTAATTAAAGACTTTCTCTGTACAGGCTGCTAATCATCGTAGGTGTTATTCTGCTTGTGAGTTCCTCACGACTGATCCGACGTCTTACTTGGCTATACCGGCGCTTTAAACGCAGTGGTGTTGATAGGAACTTTGGGCATAGATCTGGATCATCTGTCCGTTTAAGAGATTCAAGCCCTAGTGCAATCATTCAGACAACTACACTGCAAAATTTGATGTTATCTTCAAAAGCAAAGGCTGACGCTTGA ATGTGGGAACCGATTTGTTTAACGTTGGCCGCCGCCGCCGGCAACAATATCGGCAAAATACTTCAGAAGAAGGGCACCGTTATTCTTCCTCCTCTTTCTTTCAAGCTCAAGGTACTTGTATTCTGTTTCTTTGATGTGATAAGGGCTTACGCTTTTAACAAAATTTGGATAATTGGTTTCCTGATGGATATATTTGGAGCCGTTTTAATGTTGAGAGCGCTATCCCTCGCCCCTGTTTCTATAATTCAACCAGTTTCTGGGTGTGGACTTGCCATCCTCTCTATATTTTCACATTTTTATCTGAAGGAAATTATGAATGCCGTTGATTGGATGGGGATTATGCTTGCTGGCATTGGCACCATAGGGTTGGTCTTGTCTTGTATCTCAACTTTTTGTGAATCTTCATCTTCCTTGCATGCTTTTGTAATTTACTTGGCCCCCTTTTTTTTTTTTGGATTTTTTTCATTCCAAGGGGTTGGTGCTGGAGGTGAGGAGCAAAAGGCCTCTGCGATATCAGTTTTTCATCTGCCATGGCTAGCATTCATCATGACCATCTTGTTTGTTCTTCTAAATGGATGGCTTCATTTCTACAAACGTCAAAGGAGAGAACAGGAGTTGATGGAATTTGAAGTTGTTGAAGAAATAATATATGGCTTGGAATCTGGCATTTTGTTTGGGATGGCGTCTGTAATATCAAAGATGGGATTCTTATTCTTGGAGCAGGGATTCCACGAAATATTGGTTCCCATATGCATCCTGATAAGTATTTGTTGCAGTGCTACAGGATTTTACTATCAGACTCGAGGACTAAAACATGGGAGGGCAATTGTGGTGTCTACATGTGCTGCCGTGGCATCCATCGTCACTGGTGTTGTTGCTGGCATGCTTGCTCTGGGTGAAGAATTGCCGTCGTCACCAACTGGTCGCCTTCTCCTTCTGTTGGGATGGCTGCTAATCATCGTAGGTGTTATTCTGCTTGTGAGTTCCTCACGACTGATCCGACGTCTTACTTGGCTATACCGGCGCTTTAAACGCAGTGGTGTTGATAGGAACTTTGGGCATAGATCTGGATCATCTGTCCGTTTAAGAGATTCAAGCCCTAGTGCAATCATTCAGACAACTACACTGCAAAATTTGATGTTATCTTCAAAAGCAAAGGCTGACGCTTGA ATGTGGGAACCGATTTGTTTAACGTTGGCCGCCGCCGCCGGCAACAATATCGGCAAAATACTTCAGAAGAAGGGCACCGTTATTCTTCCTCCTCTTTCTTTCAAGCTCAAGGTACTTGTATTCTGTTTCTTTGATGTGATAAGGGCTTACGCTTTTAACAAAATTTGGATAATTGGTTTCCTGATGGATATATTTGGAGCCGTTTTAATGTTGAGAGCGCTATCCCTCGCCCCTGTTTCTATAATTCAACCAGTTTCTGGGTGTGGACTTGCCATCCTCTCTATATTTTCACATTTTTATCTGAAGGAAATTATGAATGCCGTTGATTGGATGGGGATTATGCTTGCTGGCATTGGCACCATAGGGTTGGTCTTGTCTTGTATCTCAACTTTTTGTGAATCTTCATCTTCCTTGCATGCTTTTGTAATTTACTTGGCCCCCTTTTTTTTTTTTGGATTTTTTTCATTCCAAGGGGTTGGTGCTGGAGGTGAGGAGCAAAAGGCCTCTGCGATATCAGTTTTTCATCTGCCATGGCTAGCATTCATCATGACCATCTTGTTTGTTCTTCTAAATGGATGGCTTCATTTCTACAAACGTCAAAGGAGAGAACAGGAGTTGATGGAATTTGAAGTTGTTGAAGAAATAATATATGGCTTGGAATCTGGCATTTTGTTTGGGATGGCGTCTGTAATATCAAAGATGGGATTCTTATTCTTGGAGCAGGGATTCCACGAAATATTGGTTCCCATATGCATCCTGATAAGTATTTGTTGCAGTGCTACAGGATTTTACTATCAGACTCGAGGACTAAAACATGGGAGGGCAATTGTGGTGTCTACATGTGCTGCCGTGGCATCCATCGTCACTGGTGTTGTTGCTGGCATGCTTGCTCTGGGTGAAGAATTGCCGTCGTCACCAACTGGTCGCCTTCTCCTTCTGTTGGGATGGCTGCTAATCATCGTAGGTGTTATTCTGCTTGTGAGTTCCTCACGACTGATCCGACGTCTTACTTGGCTATACCGGCGCTTTAAACGCAGTGGTGTTGATAGGAACTTTGGGCATAGATCTGGATCATCTGTCCGTTTAAGAGATTCAAGCCCTAGTGCAATCATTCAGACAACTACACTGCAAAATTTGATGTTATCTTCAAAAGCAAAGGCTGACGCTTGA MWEPICLTLAAAAGNNIGKILQKKGTVILPPLSFKLKVLVFCFFDVIRAYAFNKIWIIGFLMDIFGAVLMLRALSLAPVSIIQPVSGCGLAILSIFSHFYLKEIMNAVDWMGIMLAGIGTIGLVLSCISTFCESSSSLHAFVIYLAPFFFFGFFSFQGVGAGGEEQKASAISVFHLPWLAFIMTILFVLLNGWLHFYKRQRREQELMEFEVVEEIIYGLESGILFGMASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVASIVTGVVAGMLALGEELPSSPTGRLLLLLGWLLIIVGVILLVSSSRLIRRLTWLYRRFKRSGVDRNFGHRSGSSVRLRDSSPSAIIQTTTLQNLMLSSKAKADA
BLAST of Lsi04G014160 vs. Swiss-Prot
Match: NIPA9_ARATH (Probable magnesium transporter NIPA9 OS=Arabidopsis thaliana GN=At5g11960 PE=2 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 5.4e-84 Identity = 162/231 (70.13%), Postives = 194/231 (83.98%), Query Frame = 1
BLAST of Lsi04G014160 vs. TrEMBL
Match: A0A0A0L5B6_CUCSA (Probable magnesium transporter OS=Cucumis sativus GN=Csa_4G646200 PE=3 SV=1) HSP 1 Score: 488.8 bits (1257), Expect = 6.1e-135 Identity = 285/393 (72.52%), Postives = 303/393 (77.10%), Query Frame = 1
BLAST of Lsi04G014160 vs. TrEMBL
Match: M5XA95_PRUPE (Probable magnesium transporter OS=Prunus persica GN=PRUPE_ppa008131mg PE=3 SV=1) HSP 1 Score: 476.9 bits (1226), Expect = 2.4e-131 Identity = 265/388 (68.30%), Postives = 298/388 (76.80%), Query Frame = 1
BLAST of Lsi04G014160 vs. TrEMBL
Match: A0A022PVB0_ERYGU (Probable magnesium transporter OS=Erythranthe guttata GN=MIMGU_mgv1a009355mg PE=3 SV=1) HSP 1 Score: 476.9 bits (1226), Expect = 2.4e-131 Identity = 264/388 (68.04%), Postives = 299/388 (77.06%), Query Frame = 1
BLAST of Lsi04G014160 vs. TrEMBL
Match: A0A067KCX5_JATCU (Probable magnesium transporter OS=Jatropha curcas GN=JCGZ_07647 PE=3 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 1.2e-130 Identity = 266/388 (68.56%), Postives = 298/388 (76.80%), Query Frame = 1
BLAST of Lsi04G014160 vs. TrEMBL
Match: A0A068UL06_COFCA (Probable magnesium transporter OS=Coffea canephora GN=GSCOC_T00027071001 PE=3 SV=1) HSP 1 Score: 467.6 bits (1202), Expect = 1.5e-128 Identity = 257/387 (66.41%), Postives = 298/387 (77.00%), Query Frame = 1
BLAST of Lsi04G014160 vs. TAIR10
Match: AT5G11960.1 (AT5G11960.1 Protein of unknown function (DUF803)) HSP 1 Score: 312.8 bits (800), Expect = 3.0e-85 Identity = 162/231 (70.13%), Postives = 194/231 (83.98%), Query Frame = 1
BLAST of Lsi04G014160 vs. NCBI nr
Match: gi|449447136|ref|XP_004141325.1| (PREDICTED: probable magnesium transporter NIPA9 isoform X1 [Cucumis sativus]) HSP 1 Score: 488.8 bits (1257), Expect = 8.8e-135 Identity = 285/393 (72.52%), Postives = 303/393 (77.10%), Query Frame = 1
BLAST of Lsi04G014160 vs. NCBI nr
Match: gi|659103886|ref|XP_008452740.1| (PREDICTED: NIPA-like protein 3 [Cucumis melo]) HSP 1 Score: 486.1 bits (1250), Expect = 5.7e-134 Identity = 283/393 (72.01%), Postives = 302/393 (76.84%), Query Frame = 1
BLAST of Lsi04G014160 vs. NCBI nr
Match: gi|1012197529|ref|XP_015972275.1| (PREDICTED: probable magnesium transporter NIPA9 isoform X1 [Arachis duranensis]) HSP 1 Score: 484.6 bits (1246), Expect = 1.7e-133 Identity = 266/389 (68.38%), Postives = 311/389 (79.95%), Query Frame = 1
BLAST of Lsi04G014160 vs. NCBI nr
Match: gi|848923349|ref|XP_012858008.1| (PREDICTED: probable magnesium transporter NIPA9 [Erythranthe guttata]) HSP 1 Score: 476.9 bits (1226), Expect = 3.5e-131 Identity = 264/388 (68.04%), Postives = 299/388 (77.06%), Query Frame = 1
BLAST of Lsi04G014160 vs. NCBI nr
Match: gi|596121623|ref|XP_007221803.1| (hypothetical protein PRUPE_ppa008131mg [Prunus persica]) HSP 1 Score: 476.9 bits (1226), Expect = 3.5e-131 Identity = 265/388 (68.30%), Postives = 298/388 (76.80%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |