CmoCh01G017860 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGAACAAGGCAAAAAGAACAAGGCAAAAAGAACAAATTTTTGTCGTTGGATGCAAAGCTTTGACGTAAATCTCAGTTCATCCTCAAACCTTGCCGTACCCTTTTCGATCTCTTGATTTCTTCTTCCCAATTTCCTTTATTTTCTTCTTTTTTGTTTCGATTATCGGCCTTTCGGGAACCAGATGTGGGAGCCGATTTGTTTAACTTTGGCGGCCGCCGCTGGCAACAACATCGGCAAAGTACTGCAGAAGAAAGGCACCGTCATTCTTCCTCCCCTCTCTTTCAAGCTCAAGGTTCGGTATCCCCTTTTCTTTTCAATTTTGTTTTGTCCATGTCAGTGGTCGTTGTGATTTTCTTGACATTTCCTTCTAGGTCATTTAATTTCATGCGATTCGTTTGTTCTCTTCTCCTCCCTTCAACTGCCATGGCTAATTGTATTGTGTTTCATTGATGTTCATCTTCTTTGATTTTCAATTTGTCTTTACCCTTGAATTTCATTAGGGATTTGGGCTGTCGAGATGATTATAAACAATCCTTGAATGAGTTGATGAATTCCCTCTGATTGACTGTGTTATATAGGTGATTAGGGCTTATGCTTTTAACAGAGCTTGGATCATAGGTTTTCTGATGGATATATTTGGAGCCGTGCTAATGCTGAGAGCGCTATCCCTCGCCCCTGTAAGTCCTTTATTAAGCTACTTCACCCTTTCCTTTTCAGTTGTTTGGTCGGTATTGCATGATTAATTCTTCAAGTTATTGGACGCGTATGTTGTTTTTTCTAAGATCTAAATGAACTAGGGTTAGTGTATATTATCTCTCATTGAAATCCCTGGCAATTTAAATGTTTCATCTGTAATTTGATGTTGCAAAACTGGTTCACAGATTGCTTTTTTTCCCAAGATTCATACCTCATAGGAAAATTTATATTCTGTCAATGAATCTTGAGCTGATTTTCTTCTACGTAATCTGCTCGTCCTTTCTAATGACTGTCTTTCAGGTATCTATTATTCAACCAGTTTCTGGATGTGGGCTTGCCATCCTCTCTATATTTTCACATTTTTATCTGAAAGAAATAATGAATATCGTCGATTGGATGGGGATTACGCTTGCTGGCATTGGCACCATAGGTAATGTAAGTTCATATTTGTGTCTTTAATCTAATCGTCGTTTTAATCTTTTTTTCCCTTGCATTTCTGTAAATGTTCATTTGGTGTATCTCAGGTTTGCTTCTGCCTTTATATGTATCTTTATGTTCCTTCCTAGTACTGTAATTAATTTAGTTCTATTGTAGGGGTTGGTGCTGGAGGCGAGGAGCAAAAGGCCTCTGAGATATCAATTTTCCGCTTACCATGGCTAGCATTCTTCATTACCATCTTGTTTGTAGGTATCTTATATTATCATCACCTGATGTTTTGTAGAAATCTCTAGATAGGGCTGTTTGAGTTAGTGGTTTTATGGCCTTGCTTGCAGAAACAATATAACATTCTAATAATTTGTAAATTGAGCTGCAAACGGTGAAAGTGCTAATATCTCAATGCGATTGGATACATCTATATTTTAACAGGTTCTTCTTAATGGATGGCTTCATTTCTACAAACGTCAAAGGAGAGAACAAGAGTTGGTAAATTCATTGCTTTTATGTTGATCTTTCGCTGGCCTTAGTGTCCTCCTCAAAGAATAATATGTCATAAGCATATCTGTGTCTATTGCAGATGGAATTTGAAGTTGTTGAAGAAATAATATATGGTTTGGAATCAGGCATTTTGTTCGGGTACTACTTTGGCTTGCACTTCTCGACTTTATTAGATTACATATCGTGCAATTATTTAGGTTGAGGATGAATATTAGGAATTAGAATTTTGCTTCACTGTGAGGAATTCTGGCTCCTGTCTGGTTTCTAGCATATCCTAGTTTGTTTCATTTTGACAAGAAAATGAAAAATGAAAAATGAATTTTGAATAGCTCTATCATTATTATGGTTGTTTGCGTACTCTCCAAAGTGTCCACGATTTTCGATACCTGGAGAACTATTGCTATACGACGTTTTGAAAGGGAAACAGCCAATGAACTTTTTAGTTTTATGGCAGCAGTATGACACGATTAAAACGTGCAATTGCAGGATGGCATCTGTAATATCGAAGACCGGATTCCTATTCTTGGAGCAGGGCTTCCACGAAATATTAGTTCCTATATGCATCCTTATAAGTATTTGTTGCAGTGCTACAGGATTTTACTATCAGGTAGCTTGAAATGCTTGGTAATTTGACTTCTTTACAAAACTGTTCTGCATTTAATGTTAACTGTTTATCGACAACGTTCTCCTATGTTCTTCAAATTCATATTAACTATGTCTTTTCTTTAGTAGACTCGAGGACTAAAACATGGGAGGGCCATTGTAGTATCTACATGTGCTGCTGTGGCGTCTATTATTACTGGTGTTGTTGCTGGTATGCTTGCTTTGGGTGAAGAATTGCCATCGTCGCCAACCGCTCGCCTTTTCCTTCTGCTTGGATGGTAAACTAGAAATTTATATCTGTTCTGTGCTCTATGCATTCCCACATCAGTACCTTGGCTTAATAAGGAAAATTTACAAATGCTTTCCAAGTATGTGATAAATGAATGCATAATTCCTTATCATTTTCAAAGGGTGATTATGTGATGGGATTAGAATTTTGGTTCGTATGATGTACGATTAAAGAACAGTTACTTTGTACAGGCTGCTAATCATCGTAGGAGTTATTCTGCTTGTGAGTTCGTCACGACTGATCCGACGTCTTACGTGGCTGTACCGTCGTTTCAAGCAAAGTGGCACCGATAGGAACTTTGGGCATAGATCTGGATCATCTGTCCGTATAAGAGATTCAAGTCCAAGTGCTATCATTCAGACAACCACGTTACAAAATTTGCTATCTTCGAAAGCGAAGGCCGACTCTTGAAGAACATGGAGACGGGTGATGTATAGATACTAATGTGGGAGATCAGGTATGAACATATGCCGATCTGGGTTGGAATCTGGCAATGCTCTTCACTTTCTGGTGGTGGGTGTATTTAGAGTATATCTTCTTTTCTTAGGTTCCACATTTTGTGAAATCCCCTTTGGTTGTTTCAATGTTTAAGAATAATTCTTAATATCCAATTACTCCACTGTTCATGTTCATGTCATGAGTTGAAGGACTTTTTGAATTGAATCTAATTGTTTGGATCTCTAAAAGCTTCAAAATTTGAAGTCGTTGTCCGTTTAATTTCATTAGGATTCTTGCTTGGAA AATGAACAAGGCAAAAAGAACAAGGCAAAAAGAACAAATTTTTGTCGTTGGATGCAAAGCTTTGACGTAAATCTCAGTTCATCCTCAAACCTTGCCGTACCCTTTTCGATCTCTTGATTTCTTCTTCCCAATTTCCTTTATTTTCTTCTTTTTTGTTTCGATTATCGGCCTTTCGGGAACCAGATGTGGGAGCCGATTTGTTTAACTTTGGCGGCCGCCGCTGGCAACAACATCGGCAAAGTACTGCAGAAGAAAGGCACCGTCATTCTTCCTCCCCTCTCTTTCAAGCTCAAGGTGATTAGGGCTTATGCTTTTAACAGAGCTTGGATCATAGGTTTTCTGATGGATATATTTGGAGCCGTGCTAATGCTGAGAGCGCTATCCCTCGCCCCTGTATCTATTATTCAACCAGTTTCTGGATGTGGGCTTGCCATCCTCTCTATATTTTCACATTTTTATCTGAAAGAAATAATGAATATCGTCGATTGGATGGGGATTACGCTTGCTGGCATTGGCACCATAGGGGTTGGTGCTGGAGGCGAGGAGCAAAAGGCCTCTGAGATATCAATTTTCCGCTTACCATGGCTAGCATTCTTCATTACCATCTTGTTTGTTCTTCTTAATGGATGGCTTCATTTCTACAAACGTCAAAGGAGAGAACAAGAGTTGATGGAATTTGAAGTTGTTGAAGAAATAATATATGGTTTGGAATCAGGCATTTTGTTCGGGATGGCATCTGTAATATCGAAGACCGGATTCCTATTCTTGGAGCAGGGCTTCCACGAAATATTAGTTCCTATATGCATCCTTATAAGTATTTGTTGCAGTGCTACAGGATTTTACTATCAGACTCGAGGACTAAAACATGGGAGGGCCATTGTAGTATCTACATGTGCTGCTGTGGCGTCTATTATTACTGGTGTTGTTGCTGGTATGCTTGCTTTGGGTGAAGAATTGCCATCGTCGCCAACCGCTCGCCTTTTCCTTCTGCTTGGATGGCTGCTAATCATCGTAGGAGTTATTCTGCTTGTGAGTTCGTCACGACTGATCCGACGTCTTACGTGGCTGTACCGTCGTTTCAAGCAAAGTGGCACCGATAGGAACTTTGGGCATAGATCTGGATCATCTGTCCGTATAAGAGATTCAAGTCCAAGTGCTATCATTCAGACAACCACGTTACAAAATTTGCTATCTTCGAAAGCGAAGGCCGACTCTTGAAGAACATGGAGACGGGTGATGTATAGATACTAATGTGGGAGATCAGGTATGAACATATGCCGATCTGGGTTGGAATCTGGCAATGCTCTTCACTTTCTGGTGGTGGGTGTATTTAGAGTATATCTTCTTTTCTTAGGTTCCACATTTTGTGAAATCCCCTTTGGTTGTTTCAATGTTTAAGAATAATTCTTAATATCCAATTACTCCACTGTTCATGTTCATGTCATGAGTTGAAGGACTTTTTGAATTGAATCTAATTGTTTGGATCTCTAAAAGCTTCAAAATTTGAAGTCGTTGTCCGTTTAATTTCATTAGGATTCTTGCTTGGAA ATGTGGGAGCCGATTTGTTTAACTTTGGCGGCCGCCGCTGGCAACAACATCGGCAAAGTACTGCAGAAGAAAGGCACCGTCATTCTTCCTCCCCTCTCTTTCAAGCTCAAGGTGATTAGGGCTTATGCTTTTAACAGAGCTTGGATCATAGGTTTTCTGATGGATATATTTGGAGCCGTGCTAATGCTGAGAGCGCTATCCCTCGCCCCTGTATCTATTATTCAACCAGTTTCTGGATGTGGGCTTGCCATCCTCTCTATATTTTCACATTTTTATCTGAAAGAAATAATGAATATCGTCGATTGGATGGGGATTACGCTTGCTGGCATTGGCACCATAGGGGTTGGTGCTGGAGGCGAGGAGCAAAAGGCCTCTGAGATATCAATTTTCCGCTTACCATGGCTAGCATTCTTCATTACCATCTTGTTTGTTCTTCTTAATGGATGGCTTCATTTCTACAAACGTCAAAGGAGAGAACAAGAGTTGATGGAATTTGAAGTTGTTGAAGAAATAATATATGGTTTGGAATCAGGCATTTTGTTCGGGATGGCATCTGTAATATCGAAGACCGGATTCCTATTCTTGGAGCAGGGCTTCCACGAAATATTAGTTCCTATATGCATCCTTATAAGTATTTGTTGCAGTGCTACAGGATTTTACTATCAGACTCGAGGACTAAAACATGGGAGGGCCATTGTAGTATCTACATGTGCTGCTGTGGCGTCTATTATTACTGGTGTTGTTGCTGGTATGCTTGCTTTGGGTGAAGAATTGCCATCGTCGCCAACCGCTCGCCTTTTCCTTCTGCTTGGATGGCTGCTAATCATCGTAGGAGTTATTCTGCTTGTGAGTTCGTCACGACTGATCCGACGTCTTACGTGGCTGTACCGTCGTTTCAAGCAAAGTGGCACCGATAGGAACTTTGGGCATAGATCTGGATCATCTGTCCGTATAAGAGATTCAAGTCCAAGTGCTATCATTCAGACAACCACGTTACAAAATTTGCTATCTTCGAAAGCGAAGGCCGACTCTTGA
BLAST of CmoCh01G017860 vs. Swiss-Prot
Match: NIPA9_ARATH (Probable magnesium transporter NIPA9 OS=Arabidopsis thaliana GN=At5g11960 PE=2 SV=1) HSP 1 Score: 501.9 bits (1291), Expect = 5.5e-141 Identity = 253/341 (74.19%), Postives = 297/341 (87.10%), Query Frame = 1
BLAST of CmoCh01G017860 vs. TrEMBL
Match: A0A0A0L5B6_CUCSA (Probable magnesium transporter OS=Cucumis sativus GN=Csa_4G646200 PE=3 SV=1) HSP 1 Score: 632.5 bits (1630), Expect = 3.0e-178 Identity = 323/344 (93.90%), Postives = 336/344 (97.67%), Query Frame = 1
BLAST of CmoCh01G017860 vs. TrEMBL
Match: M5XA95_PRUPE (Probable magnesium transporter OS=Prunus persica GN=PRUPE_ppa008131mg PE=3 SV=1) HSP 1 Score: 531.6 bits (1368), Expect = 7.3e-148 Identity = 276/344 (80.23%), Postives = 302/344 (87.79%), Query Frame = 1
BLAST of CmoCh01G017860 vs. TrEMBL
Match: A0A067KCX5_JATCU (Probable magnesium transporter OS=Jatropha curcas GN=JCGZ_07647 PE=3 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 3.1e-146 Identity = 266/341 (78.01%), Postives = 303/341 (88.86%), Query Frame = 1
BLAST of CmoCh01G017860 vs. TrEMBL
Match: A0A061GJ77_THECC (Probable magnesium transporter OS=Theobroma cacao GN=TCM_037317 PE=3 SV=1) HSP 1 Score: 525.8 bits (1353), Expect = 4.0e-146 Identity = 264/341 (77.42%), Postives = 299/341 (87.68%), Query Frame = 1
BLAST of CmoCh01G017860 vs. TrEMBL
Match: A0A022PVB0_ERYGU (Probable magnesium transporter OS=Erythranthe guttata GN=MIMGU_mgv1a009355mg PE=3 SV=1) HSP 1 Score: 524.2 bits (1349), Expect = 1.2e-145 Identity = 267/344 (77.62%), Postives = 302/344 (87.79%), Query Frame = 1
BLAST of CmoCh01G017860 vs. TAIR10
Match: AT5G11960.1 (AT5G11960.1 Protein of unknown function (DUF803)) HSP 1 Score: 501.9 bits (1291), Expect = 3.1e-142 Identity = 253/341 (74.19%), Postives = 297/341 (87.10%), Query Frame = 1
BLAST of CmoCh01G017860 vs. NCBI nr
Match: gi|449447136|ref|XP_004141325.1| (PREDICTED: probable magnesium transporter NIPA9 isoform X1 [Cucumis sativus]) HSP 1 Score: 632.5 bits (1630), Expect = 4.3e-178 Identity = 323/344 (93.90%), Postives = 336/344 (97.67%), Query Frame = 1
BLAST of CmoCh01G017860 vs. NCBI nr
Match: gi|659103886|ref|XP_008452740.1| (PREDICTED: NIPA-like protein 3 [Cucumis melo]) HSP 1 Score: 630.9 bits (1626), Expect = 1.3e-177 Identity = 322/344 (93.60%), Postives = 335/344 (97.38%), Query Frame = 1
BLAST of CmoCh01G017860 vs. NCBI nr
Match: gi|596121623|ref|XP_007221803.1| (hypothetical protein PRUPE_ppa008131mg [Prunus persica]) HSP 1 Score: 531.6 bits (1368), Expect = 1.0e-147 Identity = 276/344 (80.23%), Postives = 302/344 (87.79%), Query Frame = 1
BLAST of CmoCh01G017860 vs. NCBI nr
Match: gi|645227415|ref|XP_008220504.1| (PREDICTED: NIPA-like protein 2 [Prunus mume]) HSP 1 Score: 529.3 bits (1362), Expect = 5.2e-147 Identity = 274/344 (79.65%), Postives = 301/344 (87.50%), Query Frame = 1
BLAST of CmoCh01G017860 vs. NCBI nr
Match: gi|802630858|ref|XP_012077252.1| (PREDICTED: probable magnesium transporter NIPA9 [Jatropha curcas]) HSP 1 Score: 526.2 bits (1354), Expect = 4.4e-146 Identity = 266/341 (78.01%), Postives = 303/341 (88.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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