Lsi04G010940 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G010940
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Location	chr04 : 13194082 .. 13205762 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTACCCTTTTTAATTTTAATTCATCGTCATAAATTTCCGATGCATGATTAAATGTGCAAATTCAACCGCTTCTCTTCCTCTTCATTTTCTCTCCCCTTCTTCTAGTTCTAATGGCTTCCTCACTCGATCATAATCAGCTACCAAACATCCACGGCGGCGCCACCGCAGCTCCTCCACCTACTCCCTCCTCACAAACCAACCACCTCTCCACCTCCGCCGCCGCCGATGCTCTCTCCAGGCTCCTCCATCGCCTACCGCCCAATCTCTCTCTCCCTACTCGCCGCTCCCCCTCCGTTAGGTCACCGCCGACGATTTCCTTCTCAGAATCTCCCAATCCTGACCTTCTCGACCGCCTTCTCTCCGCCGCCTCTGAACTCGGCTTCTTCCAACTCACCGATCATAAAATCTCTTCTCATCTCGCTCTCTCCGCCGAGTCGGAATCCGCCGCTCTGTTCGACCTTCCGGCGGAGAAGAAGGAGTCTTTATTTCCGAAAAACTGGCCTCTCGGATTTTATGGCGATGGAGACGAAGAATCGAACGGACTCGGTGAATCGTTCTGCTTCGATTCGAGACCGCGTTTCTCCGATTTGGCCGAAATTTCTCTACATTCTTTGGAGGAGTTCGTTCTTGAAATGGAGAGCCTCGGATTGAAGATCGTCGAGTTTCTGTTTCGTGCGATTGGCTTCGAGAATCCAATCGGTGAAGATCGTACCGGATTCCGGTCGCTAATATGGATATCGGATGGTTGTCCGAGCACGGAACCGGCAATGGCCGGTGGATTTTACCCGTACATTGTTGGATTGCAGTATCAGAGCAAAAACCAGAGGTGTTCTCTGTTAGGGGATTCCGGCTTGGTTGCGGCGGCGGATTCTGTGACGGTCTCCATCGGCGATATTGCGCAAGTAAGTTATCTAATCCATACGCTGTCGTTTTGTTGATATTATTTTTTGAAAGGATTTGGATAGATAATGAGATAATTACGTAATTTAATTATTATTATTATTTTTTAAAGTACAAATGGGGAAGGGATTTGAACCACGAGTACATAGATGCCCATTGAGCTAATAATTAATTAATTAATTAATGGTCAAGTATTTTTCATAATTAATAATTATTTTTAAAATGTCACAATTAATAATTCAAAAGATGTTGAATTGAGGCATCGGTCACGTGTGTTGGTGACAAATATGCTTGTTTCACAAATCCAGACAAGCATGGCAACATCTTTCTAGGGGAAAATTGAGAAAATAAGATAGTTTTTCAAAATATTTATAGAAATATTGCAGTTTTGAAAATATTTGTAAAAATATTGTAGTTTTGTGATGCGATGGAAGGTATTGTAGTTTTGTGATTAGGTGAAAGGTGTGATGTATTTAATTGGATTGGGCAAATGGTTTTTTTTTTCAAATTTTTAAATGGTCGAACACTCGACTATTCTCTATCTTTCTTTACAAATTTTCAGAAGGTCGATATCAATATAAAAATTTAATGTTTTTCATTCATTAAAAATAATAATAAAAAAATCAATGTGTCTCACAAGCGGACGTCATCGATTTCGAGTTGGTTGTCGTCATCGACTTTGAACCCTAGGCTGCTCTTGTTCCTCTCGATCTTCTGGTGGCTCTGGTACTTCAGCGCTTCATAGTATAAATATTCGTTATGCTCTCCACGTCCGCGCCTATGTCCTTGCATGTATGAAAACGATAGACCGGCCTCTAAATAATAATATCCTGAACCAAATATTGGTATCGTCATCATCATACTAGCATAATCAGCCTGACTATGCGTCTGCGTCATAGGAGACAATTCTTCCACATTGTGGCCAACCTCATCGAACTCATCTTCTTCTACTCGAGCATTCCCCCTACGCCTAAAAACTAGTGGAGATGCAATTGGTATATCGTACATATATTGTATCTTCTCCATGTAGCTCTTGTTATTATTACATACAACAATTACTTGGTTTGTCCATGTAGCTCTTGTTATTATTACATACAACAATTACTTGGTTTGGATCATTTGCAACATCACGAAGGCCACTGTTGCTTGATCTCTTTGAATTATAAAACAATTAAATAATATTTGAAATAAATTCAAATTTAGAATCATTAAACAATATTTAATTATATATCAGATGACCCACAACTGCTCTAGATGAGTAATGTATCGCCTTGTTATATTATTATACCAATTGATATAATCTTGAGTTGCATTCCTATCGAATTACCTAATTAAAACCTCTGTTGCAATAAACCTTCTACGATAGTACCATCACACTACCAAATGTGCAACTTTTTCGAACCAATCTGCGGTTCGCAAGTCGATGTCTTGCTCAGTATTACGCTCTGGTGGGACATCCTACTAGAAACCAAATTGTTTGATTACCTTGTTGGGGAAATGTCACTCACCAATATAAAAACATATGAGAGGACTTATCATTCGCCATATGTTTGACCGTTTGTACAGAAATTGGGCAAAGTGTGCATATCAGCTTTGTAGGGCTCCTAAATAATCTGAAACATAACGTAGTATATTAAAAATATTAAAGAAAAGTACATAAAAAATAGGTAGAAAAAATTCAATTGGATTCAGTATTCATGTACTTGATCGGGTTGAAGCAGATCCAACATGTATCTATATTGACTCACAACATGTGTAGTTGATCTAGTTACACAAAATTGGTCTCTCCATCTAAATTATTAAATCAATATTTTAGATTTTAAATTAACTATATCAGTTATATAAAAAATAATCTGTAAATTAAATTAAATTAAATTAATATATCGAGAATCGTATACTTGTCCAGCTAATTGATGCTCATTAACATGTCGAAGTAGGGGAGCCATTGTAGGAAATCGTTTCCATGCCTATAATTGCAGAAGTATCAGAGACCTAGTGATTTCACGAACTTTTAGGTTTTGTTGCTTTGCATAGCTACTTATACAACCATGTCAAACACGCTCCACTCCAAGAATATCATCCCGCTTCAAGAAGATTGACTACTAATGGCAGGAACATTAAGTGCACGTAGTGACTTGATATGTCAGAAAACAAACTTCCACCCATCATCTGTAATATGTATGCTCGTGTATATCTCATGACAACTTCCTTGTCTGCATCATCATCAAGCCCTGGAAATTGTGTCCCTAACCATGTTAAACTTAATCTTGATCCTTTGATTTTATCAACAGGTGGGATTACACTGACTAACAACTGACAAATATTCAACCAATCATTCTACATTGCTCCGGTAACAGGCTCGTCGTCAACAAGTAACACAAACAATACTTCTATGTCTTGTAGGGTGATAGTGCACCCTTCAATAGGCACATGAAACGTATGCGTCTCTGACATCCATCTCTCAACTAGTGTAGTGATGAGATGTCAATCTAACTGAATGAATCCCAATCTGGCAACTCCATAAAATCCTAATGTACGAAGTAGTGGTAGTATTTTATGGTTGAGTGGGATGGTGTGATGAACAACCGCCTCTCCACGTTTACAATATATCTCACATTTAGTACGATCTTGTCATACAACTGATGATCGATGAATATATTGATCGTATAAAACATAAGAATCAATCAGTCTTGGGTTTAAAGTCATGATCTAAAAGAAAAATATATATTTATTTCTCAAAGCTTGATTACACAATAAAATTATTAATTACACAATAAAAATATTAATTATATGATAGGAATATTAACAATAAAAATTCCTAATTGCTTGGTGCCGGTCTTTGTAATGAAGGACACTTCCTCCTATTGTGATCTAACTAATTGCAAAATCCACACCGTACATAACTACTGGTTTCTGACCAGTCCATCTCATTGTGGTACAATGAACTCTTTGGTTTACCAGGCTTCCTCAACAACGATGAGTCGGCATATAAGACAGACATATTTGGATGTATGATCCAACAATCTTCGTGTCGTATAGATTGAAATTGAGGAGAGTAGCATGCAGCGTATGTTGATAGTTTATAGTAGTCCTAAATCAAATCTTCATGGTTCATGTTAAACCGTGAGCAAACCGCCATAAAATGCGAGTATGGGATGCCAAATGCTTGCCACTTGTTACATGAACAGTACCGCTCATACCCATTTAGCCTCAGTGTTTGAATATTTCCTCCTTTAGCATTGAAGCTTTGACGTCTGGTTTTCACGTGAAACGCACCTTCATATCGATCATATGACTATACTTCATGTTTACTGGATCTTGCACCCATTTAAAAAAAATTTCGTGTGCGTACCTAAATGTTTACTCACTTAGTATTACAAATATATTCGAAACGAAATTGTTGATTACTAAAAAAAGAAAAAAATACTACCTGGTATATTTATCTCGATGCTCTAAAGCAGCTCTTATTTCTTCTCTTCTTATTTCTTCTCTTCTTTTTTCAAAATAATTTACACATCTGAAAAATGTTACTTGAGCGAGAGCGTTTATCGGCAACATTTGAGCTCATTCGAGGACTCCATTGATGCACTCGGATAGATTTGTCGTCATCCACCCGTATCTGACACCTCCATCATGTGCTTGAGTCCATTGCTCAATACCAATGTTGTCAAAAAAAACTCAAACAACTCTGATTTATTCTTCTAATGTCCTCAATCGCTTTATTTAATTTGCGAATTTGAAATTGACATCCGGCCCGATAAACATAATTATTTAATGGATTGAATTTATACTTTTATTGAAGTTGCTGACAATATGTCGTAAGCAGTATCGATGATGACATTTTGGTCTCGTCTAACCATTTTCTAGATTGTTCATTGCTGATATAATGCTAGCATGTCGATCTGAAATGCTGACATTATCTCAACAATGAACAATCCAGAAATTGGTTGCAAATATTTCCCAAACTACAATATTTGATTTCAGATCAACATGCTAAAATTATCTCAGCAATGACCAATCTAGAAAATGGTTGGACGGGACCAAAACGTCATTGTCGATACTCCTTACGACATATTGTCAGCAACTTCAATAAAAAAAGTATAAATTCAATCCATTAAAGAATTATGTTTATCGGGCCAGATGTTAATTTCAAATTCAGAAGTTAAATAAAGCGATTGAGGACATTAGAAGAATAAATCAGAGTTGTTTGAGTTTTTTTTTACAACATTGGTATTGAGTAATGGACTCAAACACATAATAGAGGTGTCAGATACGGGTGGATGACGACAAATCTATCCGAGTGCATGAATGGAGTCTTGAAAGGAGCTCAAATGTTGTCGATAAACGCTCTCGCTCAAGTAACATTTTTCAAATGCGTAAATTATTTTGAAAAAATAAGAGCTGCTTTAGAGCATCGAGATAAATATACGAGTTAATATTTTTTTTCTTTTTTTTAGTAATCAATAATTTGTTTCGAATATATTTGTAATACTAAGGGAGTAAACATTTAGGTACGCACATGAAATTTTTTTGATATGGGCTACAAGATCCAGTAAACATGAAGTACAGTCATATGATCGATATGAAGGTGTGTTTCATGTGAAAATCGGCAACCTCAATGCTAAAGGAGGAAATATTCAAACACTGAGGCTAAATGTGTCTGAGCGGTACTGTTCATGTGACAAGTGGCAAGCATTTGGCATCTCATGCTCGCATTTTATGGCGGTTTGCTCACGGTTTAACATGAACTATGAAGATTTCATTTAGGACTACTATAAACTATCAACATACGCTGCATGCTACTCTCCTCAATTTCAATCTATACGGCACGAAGATTGCTGGATCATACATCCAAATATGTCTGTCTTATATGCCGACTCATCGTTGTTGAGGAAGCCTGGTAAACCAAAGAGTTCATTGTACCACAATGAGATGGACTGGTCAGAATCGAGTAGTTATGTACGGTGTGGATTTTGCAATCAGTTAGATCACAATTGGAGGAAGTGTCTTTCATTACAAAGACCGGCACCAGACAATTAGAAATTTTTATTGTTAATATTCCTATCATGTAATTAATAATTTTATTGTGTAATCAAGCTTTGAGAAATAAATATATTTTTTTCTTTTAGATCATGACTTTAAACTCAGGACTGATTGATTCTTATGTTTTATACGATCTATAAATGTGAGATATATTGTAGACGTCGAGAGGCGGTTGTTCATCATACCATCCCACTCAACCATAAAATACTACTACTACTTCGTACATTAGGATTGTATGGAGTTGCCAGATTGGGATTCATTCAGTTAGATTGACATTTCATCACTGCACTAGTTGAGAGATGGATGTCAGAGACGCATACGTTTCATGTTCCTATTGAAGGGTGCACTATCACCCTACAAGACATAGAAGTATTGTTTGTGTTACTTGTTGATAGCGAGCCTGTTACCGGAGCAATGCAGAATGATTGGTTGAATATTTACTAGTCGTTACTTGGTGTAATCCCACCTGCTGATAAAATTAAAGGATCAAGATTAAGTTTAACATGGTTAGAGACACAATTTCCTGGGTTTGATGATGATGCAGATAAGGAAGTTGTCATGAGATATACACGAGCATACATATTACAGATGATGAGTGGAAATTTGTTTTCTGACTAATCAAGTCACTACGTGCACTTAATGTTTCTGTCATTGTTAGCCAATCTTCATGAAGCGGAACAATATTCTTGGAGCGGAGCGTGTTTGGCATGACTGTATAGACAACTGTGCAAAGCAACAAAACTTAAAGTTCGTGAAATTGCTAGGTCTTTGATACTTATGCAATTATGAGTTTGGGAAAGATTTCCAACAATAGTTCTTCAACTCCGACATGTCAATGAGCATCAATAACTGGACAAGTATACGGTTCTCGATATGTTAATTTAATTTAATTTACAAATTATTTTTTATATGACTGATTTAGTTAATTTAAAATCTAAAATATTGATTTAATAATATAGGTGAAGAGACCAATTTTGTATAACTATATCAGCTACATATGTTGTGAGTCAATATAGATACATGTTGGATCTGCTTCAACCTGATTAGGTACATGAATACTTAATCCAATTGAATTTTTATACATATTTTTTATGTACTTTTCTTTAATATTTTTAATATACTACGTTATGTTTCAGATTATTTGGGAGCCCTACAAAGTTGATATGCACACTTTGTCAAATTTCTGTACCAACGGTCAAGACATATAGCGGACGATAAGTCCTCTCATATGTTTTCATATTGGTGAGTGGCATTTCTCCAATAGGGTGATAAGACAATTTGGTTTCCAATAGGATGTCCCACGAGAGTGTAATATTGAATCCTTGCTACATGACATCGACCTGAGAACTGCAGATTGGTCTGAAAAAGTTGCAAATTTGGTAGTGCGATGGTACTATCGTAGAAGGTTTATTGCAATGAGGATTTCAATTGGGCAATTCGATAGGGATGAAACTCAATATTATATCAATTGATATAATAATATAACAAGACGCTACATTACTCGTCTAGGAGCAGTTGTGGGTCATCTTGTTTAATGATTTTAAATTTGAATTTATTTCAAATATTATCTAATTGTTTTATTATTCACAGAGATCGAGCAATAGTAGCTTTCGTGATGTTGCAAATGATCCAAACCAGGTCCTTACTGTATGTAATAATAACGAGAGCTACATGGAGGAGATACATTATATGTACAATATACTCATTGCACCTCCACCAGCTCCTAGGCGTAGGGGGCATGCTCAAATAGAAGAAGATGAGTTCGATGATGTTGGTCGCAATGTGGAAGAATTGCCTCCTATGACGCAGACACATAGCCAGGTTGATTATGCTAGTCCGATGATGATGATGCCAACATTTGGTTCAGGATATTATGATTTAAAGGTCGGTCCATCGTCTTCATACATGCAAGAACATGAGTGCAGACGTGGAGAGCATAATAAATATTTATACTATGAAGCGCCTGCAGAGGTACTAGAGCCACCAGAGAGGATCAAGAGCAACCTAGAGTTCAAAGTCGACGACGACAACCAACTCGAAATCGACGACATCCGCCTTGTGGGACACATTGATTTTTTTTTTATTATTATTTTTAATGAATGAAAAACATTAAATTGTTATATTGATATGAACATTTTAATTTACATTTCAGTATTTTTAAATTATGAATCATAGTTGTAATTTGTAAGAAAAGAGATTGAGAATTTATTATTTACTATAAGTCTATAATGTCTCTTACGACAAAGTTAAAATAGGGATAAATTTTGTATTAAAAAAAAAGGAAAAGAGAGCATTAGAAGAAAAAAAAGGGATGAACACTCGACCACTTGAAAATTTGAAAAAAAAAAATAACCACTTCACTCAACCCAATTAAATACATCACACCTCCCATTCCATCACAAAACTACAATATTTTTGCAAATATTTTCAAAACTACGATATTTCTACAAATATTTTGAAAAACTACCATATTTTCTCAATTTTTCCTTGGTTGTGATAGATGTTGATAGAAGTCTATCAGTGATAAACTTTTATCATTTCTATCATTGATAGATGTTGATAGAAGTCTATCAATGTCTGTCAATATTCTCTTTTGCTATAAATAGTTTTACATTTTTTTTATAGGTGAAAATTTTCCTTTAAGGGTGTATTACCTCGTTATTCGCATTAACTTACATTTCTCATCTCATATTTGTATTAACTCCCTCAATTACTCCCCACCTATAATAATTACCAACTCAACTCAATTATGCGCCCCAAACGCCCCCTAAGAAAATATAACATTTTTTTTATTCTTTTAATGGATGTGGCTCCATTTAAAAAATTAACTGAAGTTTGATTGTGGTTCTAAACTTAACGGTTCCATATTTTCTTATGTTAAAATTCGGATTCAATCACCCTGAAATATGAGTTTGGAACGGTGGCATCGTGCACTACAATTTTTTCCTCCATCAATTGGGTCGAATTAGACTTTAAGCATTCAATATATATATATATATATATATATATATATATATATATATATATATATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATATATATATATATATATATATATATATATATATATATATATATATATATATTTGGAAAGACGGTAAGGATCTGTTTGGATTGACTTTCTAAGAGGATGTTTGAAGTAAGGATTGGAATAGTGAGTAGTAAGGAGTTGTGAACTCCTTGAGCCCACAGTGTAAGGAGTTGATAAGATATAAAATTGATGTTTTCTAACCGTGGGACCCACCAACTCTTTGGACTAAACAAGGAGTGGAGTTCATAAAGTTACTTTCCTACCCCTACTTTTACTTTCCTACCCCTACTTCCCAACTCCTTGAGTTTTCAAATTTGACATGTTTGGTCACTATTTAAATTTGATATACTCAAACTTTATAGGTGTGGAGTAACGGCAAACTCAAGAAAGTGAGAGGGAGACCGGTGCCAACGATAGCGAGCATAGGAAATACCAACAACACCAACTCATGCATAATCTCATTATCGCTACTCATTACTCTTCCTGTTGACAGTCAAGTGTCTCCCCTTCTTCAACCAACTAATGAAAATGCAAATGTGGAACAATTCAGAAGTGTCGGCGATAGAAAGGAAAAAGAAGAAGACGAGGACAACAACAGTGAGGCAAAGGAACAAGGCAGTGTTTCATTCATTTAGCTTTGAAGAGTACGCATGGAGAGCGTATCACGGTTGATGCTTTCTGCTTAAAGATCCACTTGACAGATATCAAATTTGAATCGATCGATGGATGGATTGAATTGCCATTACTTTTCTATTTAAAGCACGACTCTGATGGATGAAGCAGCGACATGTGAGATTGTTTAATATTATGTTATTTATATTATGTTCATTTCCTATATTACAAGTCCATTGGACCTTTTAGCCTTTGTATCTTGACTAATATTTAATGTTGTTTTACAGCCTCAATTTAGTAAGGGTGAAATCGTAATTCTATACCTTCTCCATTATTCGACCCTCTCTTTATTTTGTATGATGGTATCACAGCACTTTATTTTGTATTGATGGTTGTGAGGTTGCAATTGATTACAGACCAAAAATCAATTAAATACAGTTTGGTGAAATCTTCA

mRNA sequence

TCTACCCTTTTTAATTTTAATTCATCGTCATAAATTTCCGATGCATGATTAAATGTGCAAATTCAACCGCTTCTCTTCCTCTTCATTTTCTCTCCCCTTCTTCTAGTTCTAATGGCTTCCTCACTCGATCATAATCAGCTACCAAACATCCACGGCGGCGCCACCGCAGCTCCTCCACCTACTCCCTCCTCACAAACCAACCACCTCTCCACCTCCGCCGCCGCCGATGCTCTCTCCAGGCTCCTCCATCGCCTACCGCCCAATCTCTCTCTCCCTACTCGCCGCTCCCCCTCCGTTAGGTCACCGCCGACGATTTCCTTCTCAGAATCTCCCAATCCTGACCTTCTCGACCGCCTTCTCTCCGCCGCCTCTGAACTCGGCTTCTTCCAACTCACCGATCATAAAATCTCTTCTCATCTCGCTCTCTCCGCCGAGTCGGAATCCGCCGCTCTGTTCGACCTTCCGGCGGAGAAGAAGGAGTCTTTATTTCCGAAAAACTGGCCTCTCGGATTTTATGGCGATGGAGACGAAGAATCGAACGGACTCGGTGAATCGTTCTGCTTCGATTCGAGACCGCGTTTCTCCGATTTGGCCGAAATTTCTCTACATTCTTTGGAGGAGTTCGTTCTTGAAATGGAGAGCCTCGGATTGAAGATCGTCGAGTTTCTGTTTCGTGCGATTGGCTTCGAGAATCCAATCGGTGAAGATCGTACCGGATTCCGGTCGCTAATATGGATATCGGATGGTTGTCCGAGCACGGAACCGGCAATGGCCGGTGGATTTTACCCGTACATTGTTGGATTGCAGTATCAGAGCAAAAACCAGAGGTGTTCTCTGTTAGGGGATTCCGGCTTGGTTGCGGCGGCGGATTCTGTGACGGTCTCCATCGGCGATATTGCGCAAGTGTGGAGTAACGGCAAACTCAAGAAAGTGAGAGGGAGACCGGTGCCAACGATAGCGAGCATAGGAAATACCAACAACACCAACTCATGCATAATCTCATTATCGCTACTCATTACTCTTCCTGTTGACAGTCAAGTGTCTCCCCTTCTTCAACCAACTAATGAAAATGCAAATGTGGAACAATTCAGAAGTGTCGGCGATAGAAAGGAAAAAGAAGAAGACGAGGACAACAACAGTGAGGCAAAGGAACAAGGCAGTGTTTCATTCATTTAGCTTTGAAGAGTACGCATGGAGAGCGTATCACGGTTGATGCTTTCTGCTTAAAGATCCACTTGACAGATATCAAATTTGAATCGATCGATGGATGGATTGAATTGCCATTACTTTTCTATTTAAAGCACGACTCTGATGGATGAAGCAGCGACATGTGAGATTGTTTAATATTATGTTATTTATATTATGTTCATTTCCTATATTACAAGTCCATTGGACCTTTTAGCCTTTGTATCTTGACTAATATTTAATGTTGTTTTACAGCCTCAATTTAGTAAGGGTGAAATCGTAATTCTATACCTTCTCCATTATTCGACCCTCTCTTTATTTTGTATGATGGTATCACAGCACTTTATTTTGTATTGATGGTTGTGAGGTTGCAATTGATTACAGACCAAAAATCAATTAAATACAGTTTGGTGAAATCTTCA

Coding sequence (CDS)

ATGGCTTCCTCACTCGATCATAATCAGCTACCAAACATCCACGGCGGCGCCACCGCAGCTCCTCCACCTACTCCCTCCTCACAAACCAACCACCTCTCCACCTCCGCCGCCGCCGATGCTCTCTCCAGGCTCCTCCATCGCCTACCGCCCAATCTCTCTCTCCCTACTCGCCGCTCCCCCTCCGTTAGGTCACCGCCGACGATTTCCTTCTCAGAATCTCCCAATCCTGACCTTCTCGACCGCCTTCTCTCCGCCGCCTCTGAACTCGGCTTCTTCCAACTCACCGATCATAAAATCTCTTCTCATCTCGCTCTCTCCGCCGAGTCGGAATCCGCCGCTCTGTTCGACCTTCCGGCGGAGAAGAAGGAGTCTTTATTTCCGAAAAACTGGCCTCTCGGATTTTATGGCGATGGAGACGAAGAATCGAACGGACTCGGTGAATCGTTCTGCTTCGATTCGAGACCGCGTTTCTCCGATTTGGCCGAAATTTCTCTACATTCTTTGGAGGAGTTCGTTCTTGAAATGGAGAGCCTCGGATTGAAGATCGTCGAGTTTCTGTTTCGTGCGATTGGCTTCGAGAATCCAATCGGTGAAGATCGTACCGGATTCCGGTCGCTAATATGGATATCGGATGGTTGTCCGAGCACGGAACCGGCAATGGCCGGTGGATTTTACCCGTACATTGTTGGATTGCAGTATCAGAGCAAAAACCAGAGGTGTTCTCTGTTAGGGGATTCCGGCTTGGTTGCGGCGGCGGATTCTGTGACGGTCTCCATCGGCGATATTGCGCAAGTGTGGAGTAACGGCAAACTCAAGAAAGTGAGAGGGAGACCGGTGCCAACGATAGCGAGCATAGGAAATACCAACAACACCAACTCATGCATAATCTCATTATCGCTACTCATTACTCTTCCTGTTGACAGTCAAGTGTCTCCCCTTCTTCAACCAACTAATGAAAATGCAAATGTGGAACAATTCAGAAGTGTCGGCGATAGAAAGGAAAAAGAAGAAGACGAGGACAACAACAGTGAGGCAAAGGAACAAGGCAGTGTTTCATTCATTTAG

Protein sequence

MASSLDHNQLPNIHGGATAAPPPTPSSQTNHLSTSAAADALSRLLHRLPPNLSLPTRRSPSVRSPPTISFSESPNPDLLDRLLSAASELGFFQLTDHKISSHLALSAESESAALFDLPAEKKESLFPKNWPLGFYGDGDEESNGLGESFCFDSRPRFSDLAEISLHSLEEFVLEMESLGLKIVEFLFRAIGFENPIGEDRTGFRSLIWISDGCPSTEPAMAGGFYPYIVGLQYQSKNQRCSLLGDSGLVAAADSVTVSIGDIAQVWSNGKLKKVRGRPVPTIASIGNTNNTNSCIISLSLLITLPVDSQVSPLLQPTNENANVEQFRSVGDRKEKEEDEDNNSEAKEQGSVSFI

Homology

[Close]

BLAST of Lsi04G010940 vs. TrEMBL
Match: A0A0A0KP52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G208470 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 3.3e-127
Identity = 237/268 (88.43%), Postives = 248/268 (92.54%), Query Frame = 1


Query: 1   MASSLDHNQLPNIHGGATAAPPPTPSSQTNHLSTSAAADALSRLLHRLPPNLSLPTRRSP 60
           MASSLDHNQLPNIH GATAAPPPTPSSQTNHLSTSAAADALS+LLHRLPPNLSLPTRRSP
Sbjct: 1   MASSLDHNQLPNIHAGATAAPPPTPSSQTNHLSTSAAADALSKLLHRLPPNLSLPTRRSP 60

Query: 61  SVRSPPTISFSESPNPDLLDRLLSAASELGFFQLTDHKISSHLALSAESESAALFDLPAE 120
           SV  PPTISFSESPNPDLL+RLLSAASELGFFQLTDHKISSHLALSAESESA LF+LPAE
Sbjct: 61  SVIPPPTISFSESPNPDLLNRLLSAASELGFFQLTDHKISSHLALSAESESAPLFNLPAE 120

Query: 121 KKESLFPKNWPLGFYGDGDEESNGLGESFCFDSRPRFSDLAEISLHSLEEFVLEMESLGL 180
           KKESLFPKNWPLGF GDGDEES+G GES CFDSR   SD  EIS HSL +FVLEMESLGL
Sbjct: 121 KKESLFPKNWPLGFKGDGDEESDGSGESLCFDSRNCLSDSPEISFHSLTDFVLEMESLGL 180

Query: 181 KIVEFLFRAIGFENPIGEDRTGFRSLIWISDGCPSTEPAMAGGFYPYIVGLQYQSKNQRC 240
           KIVEFLFRAIGFENPIGEDRTGFRSL+WIS+GC STEPAMAGGFYPYI+GLQYQS+NQ+C
Sbjct: 181 KIVEFLFRAIGFENPIGEDRTGFRSLVWISEGCRSTEPAMAGGFYPYIIGLQYQSRNQKC 240

Query: 241 SLLGDSGLV---AAADSVTVSIGDIAQV 266
           SLLGDSG V   AAADSV VSIGDIAQ+
Sbjct: 241 SLLGDSGWVAAAAAADSVMVSIGDIAQL 268

[Close]

BLAST of Lsi04G010940 vs. TrEMBL
Match: A0A061FKB2_THECC (2-oxoglutarate and Fe(II)-dependent oxygenase domain-containing protein, putative OS=Theobroma cacao GN=TCM_042485 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.3e-86
Identity = 195/360 (54.17%), Postives = 252/360 (70.00%), Query Frame = 1


Query: 1   MASSLDHNQ--LPNIHGGATAAPPPTPSSQTNH--LSTSAAADALSRLLHRLPPNLSLPT 60
           MASS    Q  LPN++G ATAAPPPTPS Q NH  +++SA ADALS+LLHRLPP LSLPT
Sbjct: 1   MASSTHKQQQHLPNLYG-ATAAPPPTPSGQPNHHLVTSSATADALSKLLHRLPPTLSLPT 60

Query: 61  RRS-PSVRSPPTISFSESPNPDLLDRLLSAASELGFFQLTDHKISSHLALSAESESAALF 120
            RS PS  SP T+SFS+   P+L D LLS+ S++GFFQLT H +SS LA SAE+ES +LF
Sbjct: 61  HRSAPSTASPRTVSFSD---PNLKDLLLSSGSKVGFFQLTSHDVSSQLANSAETESLSLF 120

Query: 121 DLPAEKKESLFPKNWPLGFYGDGDEESNGLGESFCFDSRPRFSDLAEISLHSLEEFVLEM 180
           +LP E+KES FPKNWPLGF  D +E  +  GESFC D+    ++L  +SL SL EF   +
Sbjct: 121 ELPKEQKESCFPKNWPLGFDADEEEGGDEKGESFCLDATCS-TELTNLSLSSLREFTRAL 180

Query: 181 ESLGLKIVEFLFRAIGFENPIGEDRTGFRSLIWISDGCPSTEPAMAGGFYPYIVGLQYQS 240
           E LGLKI++ L  A+GFENPIGED T F SL+WI +G    +   +GGFYP+++GLQYQ 
Sbjct: 181 EKLGLKIIDTLANAVGFENPIGEDPTRFCSLMWILEGLHGDDKP-SGGFYPFVIGLQYQI 240

Query: 241 KNQRCSLLGDSGLVAAA---DSVTVSIGDIAQVWSNGKLKKVRGRPVPTIASIGNTNNTN 300
           + Q+ SLL +SG V+ +   DS+ V++GDIAQVWSNGKL+KVRGRPV      GN    N
Sbjct: 241 RCQQYSLLSESGWVSVSPEVDSIMVTLGDIAQVWSNGKLRKVRGRPVAACLDDGN----N 300

Query: 301 SCIISLSLLITLPVDSQVSPLLQPT---NENANVEQFRSVGDRKEKEEDEDNNSEAKEQG 350
           S  +S+SLL+TLP+DSQV+PLL      +ENA+ ++ R          D++  +E K++G
Sbjct: 301 SRHVSMSLLLTLPMDSQVAPLLTKVIADDENASDDEIR----------DDEIGTEGKKEG 340

[Close]

BLAST of Lsi04G010940 vs. TrEMBL
Match: A0A151U1H0_CAJCA (Gibberellin 2-beta-dioxygenase 2 OS=Cajanus cajan GN=KK1_005679 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.6e-86
Identity = 190/349 (54.44%), Postives = 248/349 (71.06%), Query Frame = 1


Query: 1   MASSLDHNQL-PNIHGGATAAPPPTPSSQTNHL-STSAAADALSRLLHRLPPNLSLPTRR 60
           MASS    QL PN++GGAT+APPPTP++Q N L STS AADALSRLLHRLPP LSLPTR 
Sbjct: 1   MASSTHKQQLLPNLYGGATSAPPPTPAAQPNSLLSTSDAADALSRLLHRLPPTLSLPTR- 60

Query: 61  SPSVRSPPTISFSESPNPDLLDRLLSAASELGFFQLTDHKISSHLALSAESESAALFDLP 120
                SP + + +  P+  L D +LS  S+LG+ QLTDH + S LA SAESE+ ALFDL 
Sbjct: 61  ---CASPSSAAATCPPSLSLNDDVLSCVSQLGYAQLTDHSVPSGLANSAESEALALFDLS 120

Query: 121 AEKKESLFPKNWPLGFYGDGDEESNGLGESFCFDSRPRFSDLAEISLHSLEEFVLEMESL 180
            ++KE+LFPKNWPLG+   GDEE  GL ESF  DS  R+++ +E++L SL E  LE+E L
Sbjct: 121 RDRKEALFPKNWPLGY---GDEEDEGLAESFRLDS-ARWTESSELALASLRELALELEKL 180

Query: 181 GLKIVEFLFRAIGFENPIGEDRTGFRSLIWISDGCPSTEPAMAGGFYPYIVGLQYQSKNQ 240
           GLKIV+ L + +GFENP+G D T FRSL+W+S+    ++P ++GGFYP++VGLQ+Q +NQ
Sbjct: 181 GLKIVDGLTKELGFENPLGHDPTRFRSLMWVSECVRGSKPDLSGGFYPFVVGLQFQIRNQ 240

Query: 241 RCSLLGDSGLVAA---ADSVTVSIGDIAQVWSNGKLKKVRGRPVPTIASIGNTNNTNSCI 300
           + S+L DSG V+     DS+ V++GDIAQVWSNGKLKKVRGRPV   A++G  N+T    
Sbjct: 241 KYSMLSDSGWVSVLPHVDSILVTVGDIAQVWSNGKLKKVRGRPV---ATVGEENDTR--C 300

Query: 301 ISLSLLITLPVDSQVSPLLQPTNENANVEQFRSVGDRKEKEEDEDNNSE 345
           I++SLLITLP +S+V+PLL   ++             KE+ E+E NN E
Sbjct: 301 ITMSLLITLPTESRVAPLLPNKDQT------------KEESEEESNNGE 324

[Close]

BLAST of Lsi04G010940 vs. TrEMBL
Match: A0A0B0PL18_GOSAR (Gibberellin 2-beta-dioxygenase 1-like protein OS=Gossypium arboreum GN=F383_07507 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 2.5e-82
Identity = 178/320 (55.62%), Postives = 229/320 (71.56%), Query Frame = 1


Query: 7   HNQLPNIHGGATAAPPPTPSSQTNH--LSTSAAADALSRLLHRLPPNLSLPTRRSPSV-- 66
           H  LPN++G ATAAPPPTPS+Q NH  +++SAAADALS LLHRLPP LSLP RRS +   
Sbjct: 11  HQHLPNLYG-ATAAPPPTPSAQPNHHTVTSSAAADALSNLLHRLPPTLSLPKRRSSTSAT 70

Query: 67  -RSPPTISFSESPNPDLLDRLLSAASELGFFQLTDHKISSHLALSAESESAALFDLPAEK 126
            R+ PT+SFS+   P+    L+S+ SELGF QLT+H I S LA SAE+ES +LF+L  ++
Sbjct: 71  SRALPTLSFSD---PNFNHLLVSSGSELGFLQLTNHDIPSQLANSAETESLSLFELTRDQ 130

Query: 127 KESLFPKNWPLGFYGDGDEES----NGLGESFCFDSRPRFSDLAEISLHSLEEFVLEMES 186
           KES FPKNWPLGF  D D+E     +G GESFC D+       A++SL SL EF   +E 
Sbjct: 131 KESCFPKNWPLGFDADDDDEEEEDGDGKGESFCLDTECSTETTADLSLTSLREFTRALEK 190

Query: 187 LGLKIVEFLFRAIGFENPIGEDRTGFRSLIWISDGCPSTEPAMAGGFYPYIVGLQYQSKN 246
           LGLKI++ L  A+GF+N IGED T FRSL+WIS+G        +GGFYPY++GLQYQ + 
Sbjct: 191 LGLKIIDKLADAMGFDNSIGEDPTRFRSLMWISEGLHGDHDKPSGGFYPYVIGLQYQIRC 250

Query: 247 QRCSLLGDSGLVAAA---DSVTVSIGDIAQVWSNGKLKKVRGRPVPTIASIGNTNNTNSC 306
           Q+ SLL DSG V+ +   DS+ V++GDIAQVWSNGKL KVRGRP+   A +G+ N +   
Sbjct: 251 QKYSLLKDSGSVSVSPQVDSIMVTLGDIAQVWSNGKLSKVRGRPM---ACLGDGNKSR-- 310

Query: 307 IISLSLLITLPVDSQVSPLL 315
            +S+SLL+TLP +S+V+PLL
Sbjct: 311 FVSMSLLVTLPCNSRVTPLL 321

[Close]

BLAST of Lsi04G010940 vs. TrEMBL
Match: G7K254_MEDTR (2-deoxymugineic-acid 2-dioxygenase-like protein, putative OS=Medicago truncatula GN=MTR_5g082850 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.1e-81
Identity = 185/362 (51.10%), Postives = 246/362 (67.96%), Query Frame = 1


Query: 1   MASSLDHNQL--PNIHGG-ATAAPPPTPSSQT---NHLSTSAAADALSRLLHRLPPNLSL 60
           MASS   +Q+   N+HGG +T+APPPTPS+ T   NHLSTS AADALSRLLHRLPPNLSL
Sbjct: 1   MASSTHTHQILPQNLHGGGSTSAPPPTPSTTTTNNNHLSTSTAADALSRLLHRLPPNLSL 60

Query: 61  PT--RRSPSVRSPPTISFSESPNPDLLDRLLSAASELGFFQLTDHKISSHLALSAESESA 120
           PT  R SP+  SPP++SFS S  P+   +L+S+ S+LGF QLTDH +SS LA  AESES 
Sbjct: 61  PTIRRSSPTTTSPPSLSFS-SLTPE---KLISSISQLGFIQLTDHSVSSKLANLAESESL 120

Query: 121 ALFDLPAEKKESLFPKNWPLGFYGDGDEESNGLGESFCFDSRPRFS-DLAEISLHSLEEF 180
            LF+L  ++KES FP+NWP G+ GD D +   L ESF F      S +  +I L SL EF
Sbjct: 121 KLFNLSHDQKESFFPQNWPFGYEGDNDNDEEKLVESFRFQFDSLCSTESNQIKLESLSEF 180

Query: 181 VLEMESLGLKIVEFLFRAIGFENPIGEDRTGFRSLIWISDGCPSTEPAMAGGFYPYIVGL 240
              +E LGL I++ L   +G ENP+G+D   F S++W+S+  P  +P   GGFYP+IVGL
Sbjct: 181 ACALEKLGLNIIDVLMNGLGVENPVGDDSNRFSSIMWVSECLPGNKPGSMGGFYPFIVGL 240

Query: 241 QYQSKNQRCSLLGDSG----LVAAADSVTVSIGDIAQVWSNGKLKKVRGRPVPTIASIGN 300
           QYQ + Q+ SLL DSG    ++   DS+ V++GD+AQVWSNGKLKKVRGRP+  +A++G+
Sbjct: 241 QYQIRCQKYSLLSDSGGWVSVLPHVDSILVTVGDVAQVWSNGKLKKVRGRPI--MAALGD 300

Query: 301 TNNTNSCIISLSLLITLPVDSQVSPLLQPTNENANVEQFRSVGDRKEKEEDEDNNSEAKE 350
            N+ +SC I++SLLITLP++S V+PLL              +G++ + E+D DN+ E   
Sbjct: 301 END-SSC-ITMSLLITLPLESNVAPLL-------------PIGNKNKVEDDIDNDEEENN 341

[Close]

BLAST of Lsi04G010940 vs. TAIR10
Match: AT3G11150.1 (AT3G11150.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 229.9 bits (585), Expect = 2.4e-60
Identity = 151/358 (42.18%), Postives = 216/358 (60.34%), Query Frame = 1


Query: 2   ASSLDHNQLPNIHGGATAAPPPTPSSQTNHLSTSA----AADALSRLLHRLPPNLSLPTR 61
           ++ L+H+Q    HGGATAAPPPTPS   +HL+T++    A DALS L HRLPP LSLP R
Sbjct: 5   SAHLNHHQPLIKHGGATAAPPPTPSC--SHLNTTSKSETAVDALSSLFHRLPPLLSLPNR 64

Query: 62  RSPSVRSPPTISFSESPNPDLLDRLLSAASELGFFQL----TDHKISSHLALSAESESAA 121
           RS  + S P +S S     +  D L+SA ++ G+FQL    +D      +A +AES+S +
Sbjct: 65  RS--IPSLPMVSLSAGDRLEW-DDLISAVTDFGYFQLINDDSDILFPPGIAEAAESDSLS 124

Query: 122 LFDLPAEKKESLFPKNWPLGFYGDGDEESNGLGESFCFDSRPRFSDLAEISLHSLEEFVL 181
           L +L  EKKES FPK WPLG+  D +  S      FC D+    +D +E++L SL EF  
Sbjct: 125 LLELSEEKKESSFPKKWPLGYEADAETPS------FCLDADCS-TDSSELNLSSLREFTR 184

Query: 182 EMESLGLKIVEFLFRAIGFENPIGEDRTGFRSLIWISDGCPSTEPAMAGGFYPYIVGLQY 241
            +E +GLK VE L  A+GF    G D T F +L+W++ G P  EP +  GFYP++V LQY
Sbjct: 185 TLEKVGLKTVEMLANALGF----GYDSTRFNTLMWVNQGVPDDEPEVTNGFYPFVVCLQY 244

Query: 242 QSKNQRCSLLGDSGLVAA---ADSVTVSIGDIAQVWSNGKLKKVRGRPVPTIASIGNTNN 301
           Q + Q+  LL +SG V+     DSV V++GDIAQVW NG++K+V+ RPV      G  + 
Sbjct: 245 QIREQKYCLLTESGWVSVLPRVDSVLVTLGDIAQVWRNGEVKRVKYRPV---LCSGQKDG 304

Query: 302 TNSCIISLSLLITLPVDSQVSPLLQPTNENANVEQFRSVGDRKEKEEDEDNNSEAKEQ 349
              C ++++L++TLP+DS VS L    ++    E++        +EE+ED  + + E+
Sbjct: 305 PVKC-VTMTLMLTLPMDSMVSSLKDMISDGDKEEEY-------AEEEEEDGGARSDER 335

[Close]

BLAST of Lsi04G010940 vs. TAIR10
Match: AT4G21200.1 (AT4G21200.1 gibberellin 2-oxidase 8)

HSP 1 Score: 49.3 bits (116), Expect = 5.7e-06
Identity = 51/224 (22.77%), Postives = 96/224 (42.86%), Query Frame = 1


Query: 68  ISFSESPNPDLLDRLLSAASELGFFQLTDHKISSHLALSAESESAALFDLPAEKKESLFP 127
           I  +E       + +  A+ E GFFQ+ +H IS  +      E   +F  P +KK     
Sbjct: 51  IDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKKSK--S 110

Query: 128 KNWPLGFYGDGDEESNGLGE-SFCFDSRPRFSDLAE----ISLHS-LEEFVLEMESLGLK 187
           + +  G Y  G   +  + + S+        +D+++     +L S +E+F  E E+L   
Sbjct: 111 EKFSAGSYRWGTPSATSIRQLSWSEAFHVPMTDISDNKDFTTLSSTMEKFASESEALAYM 170

Query: 188 IVEFLFRAIGFENPIGEDRTGFRSL-IWISDGCPSTEPAMAGGFYPY----IVGLQYQSK 247
           + E L    G  +   ++     +  + ++   P  +P+   G  P+     + + YQ +
Sbjct: 171 LAEVLAEKSGQNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQDQ 230

Query: 248 NQRCSLLGDSGLVAAADS---VTVSIGDIAQVWSNGKLKKVRGR 278
                L+ D+  +A   +   + ++IGD+ Q WSNG  K V  R
Sbjct: 231 VGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSNGMYKSVEHR 272

[Close]

BLAST of Lsi04G010940 vs. NCBI nr
Match: gi|659130522|ref|XP_008465218.1| (PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase [Cucumis melo])

HSP 1 Score: 561.2 bits (1445), Expect = 1.3e-156
Identity = 297/351 (84.62%), Postives = 318/351 (90.60%), Query Frame = 1


Query: 1   MASSLDHNQLPNIHGGATAAPPPTPSSQTNHLSTSAAADALSRLLHRLPPNLSLPTRRSP 60
           MASSL+HNQLPNIHGGATAAPPPTPSSQTNHLSTSAAADALS+LLHRLPPNLSLPTRRSP
Sbjct: 1   MASSLNHNQLPNIHGGATAAPPPTPSSQTNHLSTSAAADALSKLLHRLPPNLSLPTRRSP 60

Query: 61  SVRSPPTISFSESPNPDLLDRLLSAASELGFFQLTDHKISSHLALSAESESAALFDLPAE 120
           SV +PPTISFSESPNPDLL+ LLSAASELGFFQLTDHKISSHLALSAESESAALF+L AE
Sbjct: 61  SVIAPPTISFSESPNPDLLNHLLSAASELGFFQLTDHKISSHLALSAESESAALFNLSAE 120

Query: 121 KKESLFPKNWPLGFYGDGDEESNGLGESFCFDSRPRFSDLAEISLHSLEEFVLEMESLGL 180
           KKESLFPKNWPLGF GDGDEES+G G+S CFDSR  FSD AEISLHSL EFVLEMESLGL
Sbjct: 121 KKESLFPKNWPLGFKGDGDEESDGSGDSLCFDSRLCFSDSAEISLHSLTEFVLEMESLGL 180

Query: 181 KIVEFLFRAIGFENPIGEDRTGFRSLIWISDGCPSTEPAMAGGFYPYIVGLQYQSKNQRC 240
           KIVEFLFRAIGFENPIGEDRTGFRSL+WIS+GC  TEPAMAGGFYPYIVGLQYQS+NQRC
Sbjct: 181 KIVEFLFRAIGFENPIGEDRTGFRSLVWISEGCRGTEPAMAGGFYPYIVGLQYQSRNQRC 240

Query: 241 SLLGDSGLV---AAADSVTVSIGDIAQVWSNGKLKKVRGRPVPTIASIGNTNNTNSCIIS 300
           SLLGDSG V   AAADSV VSIGD+AQVWSNGKLKK+RGRPVP  +S+ NT++TNS  IS
Sbjct: 241 SLLGDSGWVAAAAAADSVMVSIGDVAQVWSNGKLKKMRGRPVPMASSLANTSSTNSRTIS 300

Query: 301 LSLLITLPVDSQVSPLLQPTNENANVEQFRSVGDRKEKEEDEDNNSEAKEQ 349
           LSLLITLPVD+QVSPLL  TNEN   EQF SV D+ +KEED DN+ E KE+
Sbjct: 301 LSLLITLPVDTQVSPLLS-TNENEKEEQFASVRDKMKKEEDADND-EGKEK 349

[Close]

BLAST of Lsi04G010940 vs. NCBI nr
Match: gi|778701311|ref|XP_011654997.1| (PREDICTED: gibberellin 2-beta-dioxygenase 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 557.4 bits (1435), Expect = 1.8e-155
Identity = 294/351 (83.76%), Postives = 315/351 (89.74%), Query Frame = 1


Query: 1   MASSLDHNQLPNIHGGATAAPPPTPSSQTNHLSTSAAADALSRLLHRLPPNLSLPTRRSP 60
           MASSLDHNQLPNIH GATAAPPPTPSSQTNHLSTSAAADALS+LLHRLPPNLSLPTRRSP
Sbjct: 1   MASSLDHNQLPNIHAGATAAPPPTPSSQTNHLSTSAAADALSKLLHRLPPNLSLPTRRSP 60

Query: 61  SVRSPPTISFSESPNPDLLDRLLSAASELGFFQLTDHKISSHLALSAESESAALFDLPAE 120
           SV  PPTISFSESPNPDLL+RLLSAASELGFFQLTDHKISSHLALSAESESA LF+LPAE
Sbjct: 61  SVIPPPTISFSESPNPDLLNRLLSAASELGFFQLTDHKISSHLALSAESESAPLFNLPAE 120

Query: 121 KKESLFPKNWPLGFYGDGDEESNGLGESFCFDSRPRFSDLAEISLHSLEEFVLEMESLGL 180
           KKESLFPKNWPLGF GDGDEES+G GES CFDSR   SD  EIS HSL +FVLEMESLGL
Sbjct: 121 KKESLFPKNWPLGFKGDGDEESDGSGESLCFDSRNCLSDSPEISFHSLTDFVLEMESLGL 180

Query: 181 KIVEFLFRAIGFENPIGEDRTGFRSLIWISDGCPSTEPAMAGGFYPYIVGLQYQSKNQRC 240
           KIVEFLFRAIGFENPIGEDRTGFRSL+WIS+GC STEPAMAGGFYPYI+GLQYQS+NQ+C
Sbjct: 181 KIVEFLFRAIGFENPIGEDRTGFRSLVWISEGCRSTEPAMAGGFYPYIIGLQYQSRNQKC 240

Query: 241 SLLGDSGLV---AAADSVTVSIGDIAQVWSNGKLKKVRGRPVPTIASIGNTNNTNSCIIS 300
           SLLGDSG V   AAADSV VSIGDIAQVWSNGKLKK+RGRPVP  +S+ NT++TNS  IS
Sbjct: 241 SLLGDSGWVAAAAAADSVMVSIGDIAQVWSNGKLKKMRGRPVPMASSVANTSSTNSRTIS 300

Query: 301 LSLLITLPVDSQVSPLLQPTNENANVEQFRSVGDRKEKEEDEDNNSEAKEQ 349
           LSLLITLPVD+QVSPLL  TNENAN EQF    D+KE+E+D D + E KE+
Sbjct: 301 LSLLITLPVDTQVSPLLLSTNENANEEQF----DKKEREDDGD-SGEGKEK 346

[Close]

BLAST of Lsi04G010940 vs. NCBI nr
Match: gi|778701315|ref|XP_011654998.1| (PREDICTED: 2'-deoxymugineic-acid 2'-dioxygenase isoform X2 [Cucumis sativus])

HSP 1 Score: 463.0 bits (1190), Expect = 4.7e-127
Identity = 237/268 (88.43%), Postives = 248/268 (92.54%), Query Frame = 1


Query: 1   MASSLDHNQLPNIHGGATAAPPPTPSSQTNHLSTSAAADALSRLLHRLPPNLSLPTRRSP 60
           MASSLDHNQLPNIH GATAAPPPTPSSQTNHLSTSAAADALS+LLHRLPPNLSLPTRRSP
Sbjct: 1   MASSLDHNQLPNIHAGATAAPPPTPSSQTNHLSTSAAADALSKLLHRLPPNLSLPTRRSP 60

Query: 61  SVRSPPTISFSESPNPDLLDRLLSAASELGFFQLTDHKISSHLALSAESESAALFDLPAE 120
           SV  PPTISFSESPNPDLL+RLLSAASELGFFQLTDHKISSHLALSAESESA LF+LPAE
Sbjct: 61  SVIPPPTISFSESPNPDLLNRLLSAASELGFFQLTDHKISSHLALSAESESAPLFNLPAE 120

Query: 121 KKESLFPKNWPLGFYGDGDEESNGLGESFCFDSRPRFSDLAEISLHSLEEFVLEMESLGL 180
           KKESLFPKNWPLGF GDGDEES+G GES CFDSR   SD  EIS HSL +FVLEMESLGL
Sbjct: 121 KKESLFPKNWPLGFKGDGDEESDGSGESLCFDSRNCLSDSPEISFHSLTDFVLEMESLGL 180

Query: 181 KIVEFLFRAIGFENPIGEDRTGFRSLIWISDGCPSTEPAMAGGFYPYIVGLQYQSKNQRC 240
           KIVEFLFRAIGFENPIGEDRTGFRSL+WIS+GC STEPAMAGGFYPYI+GLQYQS+NQ+C
Sbjct: 181 KIVEFLFRAIGFENPIGEDRTGFRSLVWISEGCRSTEPAMAGGFYPYIIGLQYQSRNQKC 240

Query: 241 SLLGDSGLV---AAADSVTVSIGDIAQV 266
           SLLGDSG V   AAADSV VSIGDIAQ+
Sbjct: 241 SLLGDSGWVAAAAAADSVMVSIGDIAQL 268

[Close]

BLAST of Lsi04G010940 vs. NCBI nr
Match: gi|590561888|ref|XP_007008940.1| (2-oxoglutarate and Fe(II)-dependent oxygenase domain-containing protein, putative [Theobroma cacao])

HSP 1 Score: 328.2 bits (840), Expect = 1.8e-86
Identity = 195/360 (54.17%), Postives = 252/360 (70.00%), Query Frame = 1


Query: 1   MASSLDHNQ--LPNIHGGATAAPPPTPSSQTNH--LSTSAAADALSRLLHRLPPNLSLPT 60
           MASS    Q  LPN++G ATAAPPPTPS Q NH  +++SA ADALS+LLHRLPP LSLPT
Sbjct: 1   MASSTHKQQQHLPNLYG-ATAAPPPTPSGQPNHHLVTSSATADALSKLLHRLPPTLSLPT 60

Query: 61  RRS-PSVRSPPTISFSESPNPDLLDRLLSAASELGFFQLTDHKISSHLALSAESESAALF 120
            RS PS  SP T+SFS+   P+L D LLS+ S++GFFQLT H +SS LA SAE+ES +LF
Sbjct: 61  HRSAPSTASPRTVSFSD---PNLKDLLLSSGSKVGFFQLTSHDVSSQLANSAETESLSLF 120

Query: 121 DLPAEKKESLFPKNWPLGFYGDGDEESNGLGESFCFDSRPRFSDLAEISLHSLEEFVLEM 180
           +LP E+KES FPKNWPLGF  D +E  +  GESFC D+    ++L  +SL SL EF   +
Sbjct: 121 ELPKEQKESCFPKNWPLGFDADEEEGGDEKGESFCLDATCS-TELTNLSLSSLREFTRAL 180

Query: 181 ESLGLKIVEFLFRAIGFENPIGEDRTGFRSLIWISDGCPSTEPAMAGGFYPYIVGLQYQS 240
           E LGLKI++ L  A+GFENPIGED T F SL+WI +G    +   +GGFYP+++GLQYQ 
Sbjct: 181 EKLGLKIIDTLANAVGFENPIGEDPTRFCSLMWILEGLHGDDKP-SGGFYPFVIGLQYQI 240

Query: 241 KNQRCSLLGDSGLVAAA---DSVTVSIGDIAQVWSNGKLKKVRGRPVPTIASIGNTNNTN 300
           + Q+ SLL +SG V+ +   DS+ V++GDIAQVWSNGKL+KVRGRPV      GN    N
Sbjct: 241 RCQQYSLLSESGWVSVSPEVDSIMVTLGDIAQVWSNGKLRKVRGRPVAACLDDGN----N 300

Query: 301 SCIISLSLLITLPVDSQVSPLLQPT---NENANVEQFRSVGDRKEKEEDEDNNSEAKEQG 350
           S  +S+SLL+TLP+DSQV+PLL      +ENA+ ++ R          D++  +E K++G
Sbjct: 301 SRHVSMSLLLTLPMDSQVAPLLTKVIADDENASDDEIR----------DDEIGTEGKKEG 340

[Close]

BLAST of Lsi04G010940 vs. NCBI nr
Match: gi|1012361885|gb|KYP73068.1| (Gibberellin 2-beta-dioxygenase 2 [Cajanus cajan])

HSP 1 Score: 327.8 bits (839), Expect = 2.4e-86
Identity = 190/349 (54.44%), Postives = 248/349 (71.06%), Query Frame = 1


Query: 1   MASSLDHNQL-PNIHGGATAAPPPTPSSQTNHL-STSAAADALSRLLHRLPPNLSLPTRR 60
           MASS    QL PN++GGAT+APPPTP++Q N L STS AADALSRLLHRLPP LSLPTR 
Sbjct: 1   MASSTHKQQLLPNLYGGATSAPPPTPAAQPNSLLSTSDAADALSRLLHRLPPTLSLPTR- 60

Query: 61  SPSVRSPPTISFSESPNPDLLDRLLSAASELGFFQLTDHKISSHLALSAESESAALFDLP 120
                SP + + +  P+  L D +LS  S+LG+ QLTDH + S LA SAESE+ ALFDL 
Sbjct: 61  ---CASPSSAAATCPPSLSLNDDVLSCVSQLGYAQLTDHSVPSGLANSAESEALALFDLS 120

Query: 121 AEKKESLFPKNWPLGFYGDGDEESNGLGESFCFDSRPRFSDLAEISLHSLEEFVLEMESL 180
            ++KE+LFPKNWPLG+   GDEE  GL ESF  DS  R+++ +E++L SL E  LE+E L
Sbjct: 121 RDRKEALFPKNWPLGY---GDEEDEGLAESFRLDS-ARWTESSELALASLRELALELEKL 180

Query: 181 GLKIVEFLFRAIGFENPIGEDRTGFRSLIWISDGCPSTEPAMAGGFYPYIVGLQYQSKNQ 240
           GLKIV+ L + +GFENP+G D T FRSL+W+S+    ++P ++GGFYP++VGLQ+Q +NQ
Sbjct: 181 GLKIVDGLTKELGFENPLGHDPTRFRSLMWVSECVRGSKPDLSGGFYPFVVGLQFQIRNQ 240

Query: 241 RCSLLGDSGLVAA---ADSVTVSIGDIAQVWSNGKLKKVRGRPVPTIASIGNTNNTNSCI 300
           + S+L DSG V+     DS+ V++GDIAQVWSNGKLKKVRGRPV   A++G  N+T    
Sbjct: 241 KYSMLSDSGWVSVLPHVDSILVTVGDIAQVWSNGKLKKVRGRPV---ATVGEENDTR--C 300

Query: 301 ISLSLLITLPVDSQVSPLLQPTNENANVEQFRSVGDRKEKEEDEDNNSE 345
           I++SLLITLP +S+V+PLL   ++             KE+ E+E NN E
Sbjct: 301 ITMSLLITLPTESRVAPLLPNKDQT------------KEESEEESNNGE 324

The following BLAST results are available for this feature:

BLAST of Lsi04G010940 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi04G010940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP52_CUCSA	3.3e-127	88.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G208470 PE=4 SV=1	[more]
A0A061FKB2_THECC	1.3e-86	54.17	2-oxoglutarate and Fe(II)-dependent oxygenase domain-containing protein, putativ...	[more]
A0A151U1H0_CAJCA	1.6e-86	54.44	Gibberellin 2-beta-dioxygenase 2 OS=Cajanus cajan GN=KK1_005679 PE=4 SV=1	[more]
A0A0B0PL18_GOSAR	2.5e-82	55.63	Gibberellin 2-beta-dioxygenase 1-like protein OS=Gossypium arboreum GN=F383_0750...	[more]
G7K254_MEDTR	2.1e-81	51.10	2-deoxymugineic-acid 2-dioxygenase-like protein, putative OS=Medicago truncatula...	[more]

BLAST of Lsi04G010940 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G11150.1	2.4e-60	42.18	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily prot...	[more]
AT4G21200.1	5.7e-06	22.77	gibberellin 2-oxidase 8	[more]

BLAST of Lsi04G010940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130522\|ref\|XP_008465218.1\|	1.3e-156	84.62	PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase [Cucumis melo]	[more]
gi\|778701311\|ref\|XP_011654997.1\|	1.8e-155	83.76	PREDICTED: gibberellin 2-beta-dioxygenase 2 isoform X1 [Cucumis sativus]	[more]
gi\|778701315\|ref\|XP_011654998.1\|	4.7e-127	88.43	PREDICTED: 2'-deoxymugineic-acid 2'-dioxygenase isoform X2 [Cucumis sativus]	[more]
gi\|590561888\|ref\|XP_007008940.1\|	1.8e-86	54.17	2-oxoglutarate and Fe(II)-dependent oxygenase domain-containing protein, putativ...	[more]
gi\|1012361885\|gb\|KYP73068.1\|	2.4e-86	54.44	Gibberellin 2-beta-dioxygenase 2 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027443	IPNS-like
IPR026992	DIOX_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G010940.1	Lsi04G010940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026992	Non-haem dioxygenase N-terminal domain	PFAM	PF14226	DIOX_N	coord: 66..142 score: 3.8
IPR027443	Isopenicillin N synthase-like	GENE3D	G3DSA:2.60.120.330		coord: 56..194 score: 1.5
None	No IPR available	PANTHER	PTHR34945	FAMILY NOT NAMED	coord: 3..354 score: 9.7E
None	No IPR available	PANTHER	PTHR34945:SF1	2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN	coord: 3..354 score: 9.7E
None	No IPR available	unknown	SSF51197	Clavaminate synthase-like	coord: 50..280 score: 2.47

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G010940	Csa5G208470	Cucumber (Chinese Long) v2	culsiB369
Lsi04G010940	CSPI05G10780	Wild cucumber (PI 183967)	cpilsiB373
Lsi04G010940	Cucsa.368460	Cucumber (Gy14) v1	cgylsiB597
Lsi04G010940	CmaCh04G001480	Cucurbita maxima (Rimu)	cmalsiB671
Lsi04G010940	CmoCh04G001450	Cucurbita moschata (Rifu)	cmolsiB663
Lsi04G010940	Cla004358	Watermelon (97103) v1	lsiwmB306
Lsi04G010940	ClCG07G004310	Watermelon (Charleston Gray)	lsiwcgB297
Lsi04G010940	Cla97C07G132770	Watermelon (97103) v2	lsiwmbB298
Lsi04G010940	Bhi07G000495	Wax gourd	lsiwgoB381
Lsi04G010940	Cp4.1LG01g05290	Cucurbita pepo (Zucchini)	cpelsiB355
Lsi04G010940	CsGy5G008110	Cucumber (Gy14) v2	cgyblsiB338
Lsi04G010940	Carg18375	Silver-seed gourd	carlsiB081
Lsi04G010940	CsaV3_5G010250	Cucumber (Chinese Long) v3	cuclsiB394

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None