Lsi04G010900 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G010900
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Differentiation-associated protein 1, putative isoform 1
Location	chr04 : 13121095 .. 13123579 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTCACTTTATTGAAAGTCAATCCATTGTGTTTGGGGATGCTAATATTATAATGTAAGTTTTAATTATTATACGTAAATTGGAATACTACTCAAGCATCTGAACTATATAATTAGTGGTGGGCTTGAGGGTTTCTTGGCTAAATTGAGATGTGTGGTGGGAACAGCCAAATCATAGAAAGTTTCTATATAAATCTGAATATACGGAAACTGAAGTGTTGGAATTAGGATCTGAGAAGCCAATCATTAGCCCAATGAAGGAAAGTTCTCCTTGGAAATATATGGGGTGCCTCACTTAGAATGGCAGCACCAAAGCACTATCCTAGGGTGAGAGGGAACATTGCAAAGAGAAGTTGATTTCTCAGCTTAGTCCTGTAACCCCTTTCAATGGTTTCATAAAATAGATTCGTCGTTTCGTTTCTATCTTTGAAGGACTAGTGATGGTAGAGATTATATTGTCTTTCATTGCTATGATAAACTTGAAAAGACATGTAAGATCAAGTACTGGGTGGTCGTCGAATCGTCACTGGATTTGAAAAATAGATGAATCTAATATGTAACAGCATAAGTCATACACAATGTTATGAGTCTATGACAATAGGAAAGACAAGAATGCGAATTGATAAACAAAACAAAAAAGTAAAGGCACAAAGATTGGTAACCCAGCTCAGTGCAATATCACCTACGTTTGGGGGCAGTGTGCCCGTTAGAAAGAGTTCAGTGATTACGATGAAGTAGTTATATGTTAAAGATCTTCTCCAAGGACTCTCATACACCCTACTCTTAGTGAATAATTTAAGTTCCCCCTAAGCTTGAGATTCCCTCTCTTGTTACACTAACACTCTTTCCACATCTTGTTTGAAACACACTTCAAATAATTTATTTAAGCTGTCCTAAGTATGAGATCCCCACAACATAAACACACTTAGACTCCTCTAAGTGTACAATAATCTTGTATTTGTGTACTGAAGCAACCAATAGGAGCAGACTTCTACAGCCAAGCCTTTCAAAACACTTGGCAACATCTTCCCAGAAAGTTCTATATCTCAGGGCTCTCACACTACAAACTTTTTATCCAAAAGAGGGGCTAACCCTAAAACAAGGTAAACAACCTTATATATATGAGCAGCTATGAAGATAACAACAGAAACGAAAAATATCTTCATCAAGAAAAAGAATGGAAAGTTGCTCCTGCGAATCAAAAAGACAAATAAGGAAAAAAAAAATCTTTCCAAACAAAGATTGCTTAGACGACAATAGAGCTCCTGACAAACCCAGGAACAAACTGCACAACATTTTGTCTGTAACAAAAAATTCAGCCAACTCAAGTGCAATAAGAGGATCCATCAAATACCTTGAAGCTTTCTCTCATGCCTTCTCATTTCTACTTTTTCAGCTACTGATTACTTTATTATATATCAACTGAATTCAATTTGATCTTGGTGATTGTGGTTTCCTTAATTATGTGTATTGATGTTCATCAGAAGTTGCAAGTCACTTACAAGAACGTTTCACGATTCTCATTTTCGAAGGTCAGAAAATCGACGTCCTTCTGTGGGACGTATGGCACAATGAGAGGAATTGCAAAGGAGAGAAGACCAGGATTGTCTTTCTCACTTGCAGCTACAGGCAGCAACCAGGTAGACACAGACACCAATGAGAAGGGTTCTGGAATTACTGGAAGAACTCTTTCTAATGACAATTCCTCAGCTTCGAGTCAATCACCTTCAGATGCTTCAGCAGAGAATGGAATCTCTCAACTCAATGTTACCAATGAGTCTTCTTCTCAATCACCTGAGGCTTCCAACGGACAAGTATTGTCTTCAGAACAGAATGTAGATACAGGTTCATCACCTGATTTACAATCCACAAAAAAATCTCCATTAACTGCAAGAGAAAGACTAAGGGCAGCTCGTGTTCTTAACCGTTACAACGAATCAAAGACCTCCAAGTCTGACATGGGCAGCAAAGTATTGGAAGCGATACGAGAGAGTGATCGTGGGAAGAAAAGGTCGAGGCTTCCAGAAGCGCCTACTAATTTGTTCGATGATAGCAAGCGAGGGATGCCAAAACCAGGCTGGACGTTTCAGTTCCCGGGCGGTTCGGATCTTTTTGTCATTGCCTTTTCGTTCGTTTTCATTAGTACAGTGATGTTTGCTACCACCTACATTGTGTGGAAAGTTGGTGCAATTCATTTTAATGAGTACTGAAGTGGACTGCAAAGAGGTCAATCTCTCAAAAAGCTGCCCCCTATCCTGCTAGAAATAGTTCTTTGATCTTCTTTTGCTATATGGTACACTTGGATGCTCATCTTTTGCTAGATGCCATACTCAGTAATGCTTGCATAGTCTTGAATGTACAAAAGCTTTTTGCTCAACATTTTGATTAGTGTAATATTGATTTTGTTTTTGAATCTTTGGACTCGTTTGATATCATTTGGAAAATTATGTAAAAATAAGTTGCAGATTAGATTATCGTTTTG

mRNA sequence

ATGAAGAAGTTGCAAGTCACTTACAAGAACGTTTCACGATTCTCATTTTCGAAGGTCAGAAAATCGACGTCCTTCTGTGGGACGTATGGCACAATGAGAGGAATTGCAAAGGAGAGAAGACCAGGATTGTCTTTCTCACTTGCAGCTACAGGCAGCAACCAGGTAGACACAGACACCAATGAGAAGGGTTCTGGAATTACTGGAAGAACTCTTTCTAATGACAATTCCTCAGCTTCGAGTCAATCACCTTCAGATGCTTCAGCAGAGAATGGAATCTCTCAACTCAATGTTACCAATGAGTCTTCTTCTCAATCACCTGAGGCTTCCAACGGACAAGTATTGTCTTCAGAACAGAATGTAGATACAGGTTCATCACCTGATTTACAATCCACAAAAAAATCTCCATTAACTGCAAGAGAAAGACTAAGGGCAGCTCGTGTTCTTAACCGTTACAACGAATCAAAGACCTCCAAGTCTGACATGGGCAGCAAAGTATTGGAAGCGATACGAGAGAGTGATCGTGGGAAGAAAAGGTCGAGGCTTCCAGAAGCGCCTACTAATTTGTTCGATGATAGCAAGCGAGGGATGCCAAAACCAGGCTGGACGTTTCAGTTCCCGGGCGGTTCGGATCTTTTTGTCATTGCCTTTTCGTTCGTTTTCATTAGTACAGTGATGTTTGCTACCACCTACATTGTGTGGAAAGTTGGTGCAATTCATTTTAATGAGTACTGAAGTGGACTGCAAAGAGGTCAATCTCTCAAAAAGCTGCCCCCTATCCTGCTAGAAATAGTTCTTTGATCTTCTTTTGCTATATGGTACACTTGGATGCTCATCTTTTGCTAGATGCCATACTCAGTAATGCTTGCATAGTCTTGAATGTACAAAAGCTTTTTGCTCAACATTTTGATTAGTGTAATATTGATTTTGTTTTTGAATCTTTGGACTCGTTTGATATCATTTGGAAAATTATGTAAAAATAAGTTGCAGATTAGATTATCGTTTTG

Coding sequence (CDS)

ATGAAGAAGTTGCAAGTCACTTACAAGAACGTTTCACGATTCTCATTTTCGAAGGTCAGAAAATCGACGTCCTTCTGTGGGACGTATGGCACAATGAGAGGAATTGCAAAGGAGAGAAGACCAGGATTGTCTTTCTCACTTGCAGCTACAGGCAGCAACCAGGTAGACACAGACACCAATGAGAAGGGTTCTGGAATTACTGGAAGAACTCTTTCTAATGACAATTCCTCAGCTTCGAGTCAATCACCTTCAGATGCTTCAGCAGAGAATGGAATCTCTCAACTCAATGTTACCAATGAGTCTTCTTCTCAATCACCTGAGGCTTCCAACGGACAAGTATTGTCTTCAGAACAGAATGTAGATACAGGTTCATCACCTGATTTACAATCCACAAAAAAATCTCCATTAACTGCAAGAGAAAGACTAAGGGCAGCTCGTGTTCTTAACCGTTACAACGAATCAAAGACCTCCAAGTCTGACATGGGCAGCAAAGTATTGGAAGCGATACGAGAGAGTGATCGTGGGAAGAAAAGGTCGAGGCTTCCAGAAGCGCCTACTAATTTGTTCGATGATAGCAAGCGAGGGATGCCAAAACCAGGCTGGACGTTTCAGTTCCCGGGCGGTTCGGATCTTTTTGTCATTGCCTTTTCGTTCGTTTTCATTAGTACAGTGATGTTTGCTACCACCTACATTGTGTGGAAAGTTGGTGCAATTCATTTTAATGAGTACTGA

Protein sequence

MKKLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY

Homology

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BLAST of Lsi04G010900 vs. TrEMBL
Match: A0A0A0KM52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G209990 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 1.0e-103
Identity = 212/241 (87.97%), Postives = 219/241 (90.87%), Query Frame = 1


Query: 3   KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEK 62
           KLQVTYKNVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEK
Sbjct: 15  KLQVTYKNVSRSSFPNVRKSTSICGTYYTTRGIAKERRRGLSLSLAATGSNQVDTNTNEK 74

Query: 63  GSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDT 122
           GS ITGRTLSND+SSA SQ PS+ASAENGISQLNV NESSSQ  EASNGQ+LSSEQN DT
Sbjct: 75  GSEITGRTLSNDDSSALSQPPSNASAENGISQLNVNNESSSQLSEASNGQILSSEQNSDT 134

Query: 123 GSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLP 182
            SSPD Q TKKS LTARERLRAARVL+RYNESKTSKSDM SKVLEAIRESDRGKKRSRLP
Sbjct: 135 SSSPDSQFTKKSSLTARERLRAARVLSRYNESKTSKSDMSSKVLEAIRESDRGKKRSRLP 194

Query: 183 EAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNE 242
           EAPTNLFDDSKRGMPKPGWTFQFPGGSDLF I FSFVFIS+VMFATTY+VWKVGAIHFNE
Sbjct: 195 EAPTNLFDDSKRGMPKPGWTFQFPGGSDLFFIVFSFVFISSVMFATTYVVWKVGAIHFNE 254

Query: 243 Y 244
           Y
Sbjct: 255 Y 255

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BLAST of Lsi04G010900 vs. TrEMBL
Match: A0A061FK95_THECC (Differentiation-associated protein 1, putative isoform 1 OS=Theobroma cacao GN=TCM_042476 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 9.3e-57
Identity = 143/246 (58.13%), Postives = 178/246 (72.36%), Query Frame = 1


Query: 3   KLQVTYKNVSRFSFS----KVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTD 62
           KLQ  Y++ SR S      K    T     YG+ RG  +++R GL  S+A   S+++  +
Sbjct: 14  KLQAKYQHASRSSAGASALKANPITFPLQIYGS-RGHIQQKRWGLCLSVA--DSDRLAAN 73

Query: 63  TNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQ 122
           ++ KGSG   R +S++  +A   +  D+   NG+ + N  NES S++ E SNG ++SS  
Sbjct: 74  SSVKGSGDAERPVSDNQVAALKPTLLDSPRGNGLLETNADNESPSETSETSNGSMVSSNL 133

Query: 123 NVDTGSSPDLQST-KKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKK 182
             +   SP LQST KK+PLTA+ERLRAARVL+RY ESK SKS+MGSKVL+A+RESD+GKK
Sbjct: 134 KQEAPLSPGLQSTTKKAPLTAKERLRAARVLSRYAESKPSKSEMGSKVLDALRESDKGKK 193

Query: 183 RSRLPEAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGA 242
           RSRLPEAPTNLFDDSKRG+PK G TFQFPGGSDLF+I FSFVFISTVMF TTYIVWKVGA
Sbjct: 194 RSRLPEAPTNLFDDSKRGLPKQGLTFQFPGGSDLFLIIFSFVFISTVMFTTTYIVWKVGA 253

Query: 243 IHFNEY 244
           IHFNEY
Sbjct: 254 IHFNEY 256

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BLAST of Lsi04G010900 vs. TrEMBL
Match: A5ACP1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005430 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.7e-56
Identity = 144/245 (58.78%), Postives = 172/245 (70.20%), Query Frame = 1


Query: 4   LQVTYKNVSR----FSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDT 63
           LQ  Y++VSR     S  KV  S+S  G + + R I  +R       L    S+QV  +T
Sbjct: 479 LQAKYQHVSRSPVGVSLLKVTPSSSSLGVFESKRSIKHKRWDS---GLLVADSDQVAGET 538

Query: 64  NEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQN 123
           +EK SG      S D   A + S  D +A NG  Q N+ NES  Q+ EAS G  +SS+  
Sbjct: 539 SEKSSGSVD---SEDQVLAVNPSSLDYAAGNGQFQTNIVNESEPQTFEASKGSTVSSDLK 598

Query: 124 VDTGSSPDLQST-KKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKR 183
            +TGSSPD QS  K+SPLTARERLRAARVL+RY E+ +SKS++GSKVL+A+R SD+GK+R
Sbjct: 599 QNTGSSPDSQSKPKRSPLTARERLRAARVLSRYTETTSSKSELGSKVLDALRASDKGKRR 658

Query: 184 SRLPEAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAI 243
           S LPEAPTNLFDDSKRG+PK G TFQFPGG DLF+IAFSFVFISTVMFATTYIVWK GAI
Sbjct: 659 SGLPEAPTNLFDDSKRGLPKQGLTFQFPGGVDLFIIAFSFVFISTVMFATTYIVWKAGAI 717

[Close]

BLAST of Lsi04G010900 vs. TrEMBL
Match: D7T4M3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g01340 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.7e-56
Identity = 144/245 (58.78%), Postives = 172/245 (70.20%), Query Frame = 1


Query: 4   LQVTYKNVSR----FSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDT 63
           LQ  Y++VSR     S  KV  S+S  G + + R I  +R       L    S+QV  +T
Sbjct: 15  LQAKYQHVSRSPVGVSLLKVTPSSSSLGVFESKRSIKHKRWDS---GLLVADSDQVAGET 74

Query: 64  NEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQN 123
           +EK SG      S D   A + S  D +A NG  Q N+ NES  Q+ EAS G  +SS+  
Sbjct: 75  SEKSSGSVD---SEDQVLAVNPSSLDYAAGNGQFQTNIVNESEPQTFEASKGSTVSSDLK 134

Query: 124 VDTGSSPDLQST-KKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKR 183
            +TGSSPD QS  K+SPLTARERLRAARVL+RY E+ +SKS++GSKVL+A+R SD+GK+R
Sbjct: 135 QNTGSSPDSQSKPKRSPLTARERLRAARVLSRYTETTSSKSELGSKVLDALRASDKGKRR 194

Query: 184 SRLPEAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAI 243
           S LPEAPTNLFDDSKRG+PK G TFQFPGG DLF+IAFSFVFISTVMFATTYIVWK GAI
Sbjct: 195 SGLPEAPTNLFDDSKRGLPKQGLTFQFPGGVDLFIIAFSFVFISTVMFATTYIVWKAGAI 253

[Close]

BLAST of Lsi04G010900 vs. TrEMBL
Match: A0A061FKZ1_THECC (Differentiation-associated protein 1, putative isoform 2 OS=Theobroma cacao GN=TCM_042476 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 7.9e-56
Identity = 141/245 (57.55%), Postives = 177/245 (72.24%), Query Frame = 1


Query: 4   LQVTYKNVSRFSFS----KVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDT 63
           L+  Y++ SR S      K    T     YG+ RG  +++R GL  S+A   S+++  ++
Sbjct: 13  LKAKYQHASRSSAGASALKANPITFPLQIYGS-RGHIQQKRWGLCLSVA--DSDRLAANS 72

Query: 64  NEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQN 123
           + KGSG   R +S++  +A   +  D+   NG+ + N  NES S++ E SNG ++SS   
Sbjct: 73  SVKGSGDAERPVSDNQVAALKPTLLDSPRGNGLLETNADNESPSETSETSNGSMVSSNLK 132

Query: 124 VDTGSSPDLQST-KKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKR 183
            +   SP LQST KK+PLTA+ERLRAARVL+RY ESK SKS+MGSKVL+A+RESD+GKKR
Sbjct: 133 QEAPLSPGLQSTTKKAPLTAKERLRAARVLSRYAESKPSKSEMGSKVLDALRESDKGKKR 192

Query: 184 SRLPEAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAI 243
           SRLPEAPTNLFDDSKRG+PK G TFQFPGGSDLF+I FSFVFISTVMF TTYIVWKVGAI
Sbjct: 193 SRLPEAPTNLFDDSKRGLPKQGLTFQFPGGSDLFLIIFSFVFISTVMFTTTYIVWKVGAI 252

[Close]

BLAST of Lsi04G010900 vs. TAIR10
Match: AT3G56010.1 (AT3G56010.1 unknown protein)

HSP 1 Score: 149.8 bits (377), Expect = 2.1e-36
Identity = 93/174 (53.45%), Postives = 120/174 (68.97%), Query Frame = 1


Query: 72  SNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDTGSSPDLQST 131
           +NDNS  ++   S +S+++        N+  S+S E+SNG                  + 
Sbjct: 54  TNDNSVTTTSVDSSSSSDS--------NKPVSESVESSNG------------------TA 113

Query: 132 KKSPLTARERLRAARVLNRYNES--KTSKSDMGSKVLEAIRESDRGKKRSR-LPEAPTNL 191
           KK+PLTARERLRAARVL+RY E+  K SK  MGS++L+ ++ESD+  KR   LPEAPTN+
Sbjct: 114 KKAPLTARERLRAARVLSRYTEATPKPSKPKMGSQLLDVLKESDKKSKRKPGLPEAPTNM 173

Query: 192 FDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNE 243
            DDS+RGMPK G TF  PGGSD+ +IAFSFVFISTVMFATT++VWK+GAIHFNE
Sbjct: 174 LDDSRRGMPKSGLTFDLPGGSDILIIAFSFVFISTVMFATTFLVWKLGAIHFNE 201

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BLAST of Lsi04G010900 vs. NCBI nr
Match: gi|659109647|ref|XP_008454805.1| (PREDICTED: uncharacterized protein DDB_G0271670 isoform X1 [Cucumis melo])

HSP 1 Score: 386.3 bits (991), Expect = 3.8e-104
Identity = 214/241 (88.80%), Postives = 219/241 (90.87%), Query Frame = 1


Query: 3   KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEK 62
           K QVTY+NVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEK
Sbjct: 15  KWQVTYENVSRSSFPNVRKSTSLCGTYCTTRGIAKERRRGLSLSLAATGSNQVDTNTNEK 74

Query: 63  GSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDT 122
           GS ITGRTLSNDNSSA SQSPS+AS+ENGISQLNV NESSSQ  EASNGQVLSS QN DT
Sbjct: 75  GSEITGRTLSNDNSSALSQSPSNASSENGISQLNVNNESSSQLSEASNGQVLSSVQNPDT 134

Query: 123 GSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLP 182
            SSPD QSTKKSPLTARERLRAARVL+RYNESKTSKSDMGSKVLEAIRESDRGKKRSRLP
Sbjct: 135 SSSPDPQSTKKSPLTARERLRAARVLSRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLP 194

Query: 183 EAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNE 242
           EAP NLFDDSKRGMPKPGWTFQFPGGSDLF I FSFVFISTVMFATTYIVWKVG IHFNE
Sbjct: 195 EAPINLFDDSKRGMPKPGWTFQFPGGSDLFFIVFSFVFISTVMFATTYIVWKVGGIHFNE 254

Query: 243 Y 244
           Y
Sbjct: 255 Y 255

[Close]

BLAST of Lsi04G010900 vs. NCBI nr
Match: gi|659109649|ref|XP_008454806.1| (PREDICTED: sericin-2 isoform X2 [Cucumis melo])

HSP 1 Score: 385.6 bits (989), Expect = 6.5e-104
Identity = 213/239 (89.12%), Postives = 218/239 (91.21%), Query Frame = 1


Query: 5   QVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGS 64
           QVTY+NVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEKGS
Sbjct: 16  QVTYENVSRSSFPNVRKSTSLCGTYCTTRGIAKERRRGLSLSLAATGSNQVDTNTNEKGS 75

Query: 65  GITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDTGS 124
            ITGRTLSNDNSSA SQSPS+AS+ENGISQLNV NESSSQ  EASNGQVLSS QN DT S
Sbjct: 76  EITGRTLSNDNSSALSQSPSNASSENGISQLNVNNESSSQLSEASNGQVLSSVQNPDTSS 135

Query: 125 SPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEA 184
           SPD QSTKKSPLTARERLRAARVL+RYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEA
Sbjct: 136 SPDPQSTKKSPLTARERLRAARVLSRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEA 195

Query: 185 PTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY 244
           P NLFDDSKRGMPKPGWTFQFPGGSDLF I FSFVFISTVMFATTYIVWKVG IHFNEY
Sbjct: 196 PINLFDDSKRGMPKPGWTFQFPGGSDLFFIVFSFVFISTVMFATTYIVWKVGGIHFNEY 254

[Close]

BLAST of Lsi04G010900 vs. NCBI nr
Match: gi|449460896|ref|XP_004148180.1| (PREDICTED: uncharacterized protein LOC101222663 isoform X1 [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 1.5e-103
Identity = 212/241 (87.97%), Postives = 219/241 (90.87%), Query Frame = 1


Query: 3   KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEK 62
           KLQVTYKNVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEK
Sbjct: 15  KLQVTYKNVSRSSFPNVRKSTSICGTYYTTRGIAKERRRGLSLSLAATGSNQVDTNTNEK 74

Query: 63  GSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDT 122
           GS ITGRTLSND+SSA SQ PS+ASAENGISQLNV NESSSQ  EASNGQ+LSSEQN DT
Sbjct: 75  GSEITGRTLSNDDSSALSQPPSNASAENGISQLNVNNESSSQLSEASNGQILSSEQNSDT 134

Query: 123 GSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLP 182
            SSPD Q TKKS LTARERLRAARVL+RYNESKTSKSDM SKVLEAIRESDRGKKRSRLP
Sbjct: 135 SSSPDSQFTKKSSLTARERLRAARVLSRYNESKTSKSDMSSKVLEAIRESDRGKKRSRLP 194

Query: 183 EAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNE 242
           EAPTNLFDDSKRGMPKPGWTFQFPGGSDLF I FSFVFIS+VMFATTY+VWKVGAIHFNE
Sbjct: 195 EAPTNLFDDSKRGMPKPGWTFQFPGGSDLFFIVFSFVFISSVMFATTYVVWKVGAIHFNE 254

Query: 243 Y 244
           Y
Sbjct: 255 Y 255

[Close]

BLAST of Lsi04G010900 vs. NCBI nr
Match: gi|778701328|ref|XP_011655002.1| (PREDICTED: uncharacterized protein LOC101222663 isoform X2 [Cucumis sativus])

HSP 1 Score: 382.9 bits (982), Expect = 4.2e-103
Identity = 211/240 (87.92%), Postives = 218/240 (90.83%), Query Frame = 1


Query: 4   LQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKG 63
           LQVTYKNVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEKG
Sbjct: 15  LQVTYKNVSRSSFPNVRKSTSICGTYYTTRGIAKERRRGLSLSLAATGSNQVDTNTNEKG 74

Query: 64  SGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDTG 123
           S ITGRTLSND+SSA SQ PS+ASAENGISQLNV NESSSQ  EASNGQ+LSSEQN DT 
Sbjct: 75  SEITGRTLSNDDSSALSQPPSNASAENGISQLNVNNESSSQLSEASNGQILSSEQNSDTS 134

Query: 124 SSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPE 183
           SSPD Q TKKS LTARERLRAARVL+RYNESKTSKSDM SKVLEAIRESDRGKKRSRLPE
Sbjct: 135 SSPDSQFTKKSSLTARERLRAARVLSRYNESKTSKSDMSSKVLEAIRESDRGKKRSRLPE 194

Query: 184 APTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY 243
           APTNLFDDSKRGMPKPGWTFQFPGGSDLF I FSFVFIS+VMFATTY+VWKVGAIHFNEY
Sbjct: 195 APTNLFDDSKRGMPKPGWTFQFPGGSDLFFIVFSFVFISSVMFATTYVVWKVGAIHFNEY 254

[Close]

BLAST of Lsi04G010900 vs. NCBI nr
Match: gi|590561822|ref|XP_007008920.1| (Differentiation-associated protein 1, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 228.4 bits (581), Expect = 1.3e-56
Identity = 143/246 (58.13%), Postives = 178/246 (72.36%), Query Frame = 1


Query: 3   KLQVTYKNVSRFSFS----KVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTD 62
           KLQ  Y++ SR S      K    T     YG+ RG  +++R GL  S+A   S+++  +
Sbjct: 14  KLQAKYQHASRSSAGASALKANPITFPLQIYGS-RGHIQQKRWGLCLSVA--DSDRLAAN 73

Query: 63  TNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQ 122
           ++ KGSG   R +S++  +A   +  D+   NG+ + N  NES S++ E SNG ++SS  
Sbjct: 74  SSVKGSGDAERPVSDNQVAALKPTLLDSPRGNGLLETNADNESPSETSETSNGSMVSSNL 133

Query: 123 NVDTGSSPDLQST-KKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKK 182
             +   SP LQST KK+PLTA+ERLRAARVL+RY ESK SKS+MGSKVL+A+RESD+GKK
Sbjct: 134 KQEAPLSPGLQSTTKKAPLTAKERLRAARVLSRYAESKPSKSEMGSKVLDALRESDKGKK 193

Query: 183 RSRLPEAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGA 242
           RSRLPEAPTNLFDDSKRG+PK G TFQFPGGSDLF+I FSFVFISTVMF TTYIVWKVGA
Sbjct: 194 RSRLPEAPTNLFDDSKRGLPKQGLTFQFPGGSDLFLIIFSFVFISTVMFTTTYIVWKVGA 253

Query: 243 IHFNEY 244
           IHFNEY
Sbjct: 254 IHFNEY 256

The following BLAST results are available for this feature:

BLAST of Lsi04G010900 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi04G010900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM52_CUCSA	1.0e-103	87.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G209990 PE=4 SV=1	[more]
A0A061FK95_THECC	9.3e-57	58.13	Differentiation-associated protein 1, putative isoform 1 OS=Theobroma cacao GN=T...	[more]
A5ACP1_VITVI	2.7e-56	58.78	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005430 PE=4 SV=1	[more]
D7T4M3_VITVI	2.7e-56	58.78	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g01340 PE=4 SV=...	[more]
A0A061FKZ1_THECC	7.9e-56	57.55	Differentiation-associated protein 1, putative isoform 2 OS=Theobroma cacao GN=T...	[more]

BLAST of Lsi04G010900 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G56010.1	2.1e-36	53.45	unknown protein	[more]

BLAST of Lsi04G010900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659109647\|ref\|XP_008454805.1\|	3.8e-104	88.80	PREDICTED: uncharacterized protein DDB_G0271670 isoform X1 [Cucumis melo]	[more]
gi\|659109649\|ref\|XP_008454806.1\|	6.5e-104	89.12	PREDICTED: sericin-2 isoform X2 [Cucumis melo]	[more]
gi\|449460896\|ref\|XP_004148180.1\|	1.5e-103	87.97	PREDICTED: uncharacterized protein LOC101222663 isoform X1 [Cucumis sativus]	[more]
gi\|778701328\|ref\|XP_011655002.1\|	4.2e-103	87.92	PREDICTED: uncharacterized protein LOC101222663 isoform X2 [Cucumis sativus]	[more]
gi\|590561822\|ref\|XP_007008920.1\|	1.3e-56	58.13	Differentiation-associated protein 1, putative isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009058	biosynthetic process
biological_process	GO:1901135	carbohydrate derivative metabolic process
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0044281	small molecule metabolic process
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0044710	single-organism metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G010900.1	Lsi04G010900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37233	FAMILY NOT NAMED	coord: 33..243 score: 7.8
None	No IPR available	PANTHER	PTHR37233:SF1	SUBFAMILY NOT NAMED	coord: 33..243 score: 7.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G010900	Csa5G209990	Cucumber (Chinese Long) v2	culsiB369
Lsi04G010900	CSPI05G10820	Wild cucumber (PI 183967)	cpilsiB373
Lsi04G010900	Cucsa.368400	Cucumber (Gy14) v1	cgylsiB597
Lsi04G010900	CmoCh04G001410	Cucurbita moschata (Rifu)	cmolsiB663
Lsi04G010900	Cla004363	Watermelon (97103) v1	lsiwmB306
Lsi04G010900	MELO3C018364	Melon (DHL92) v3.5.1	lsimeB285
Lsi04G010900	ClCG07G004350	Watermelon (Charleston Gray)	lsiwcgB297
Lsi04G010900	MELO3C018364.2	Melon (DHL92) v3.6.1	lsimedB299
Lsi04G010900	Cla97C07G132810	Watermelon (97103) v2	lsiwmbB298
Lsi04G010900	Bhi07G000491	Wax gourd	lsiwgoB381
Lsi04G010900	Cp4.1LG01g05580	Cucurbita pepo (Zucchini)	cpelsiB355
Lsi04G010900	CsGy5G008150	Cucumber (Gy14) v2	cgyblsiB338
Lsi04G010900	Carg18379	Silver-seed gourd	carlsiB081
Lsi04G010900	CsaV3_5G010290	Cucumber (Chinese Long) v3	cuclsiB394

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G010900	Cucurbita maxima (Rimu)	cmalsiB671
Lsi04G010900	Cucurbita maxima (Rimu)	cmalsiB672
Lsi04G010900	Cucurbita moschata (Rifu)	cmolsiB662
Lsi04G010900	Cucurbita pepo (Zucchini)	cpelsiB354
Lsi04G010900	Silver-seed gourd	carlsiB605