Cp4.1LG01g05580 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTATTGATATTCACCAGAAGTTGCAAGCCACTTACGAGAACATTTCGAGATCCACATTTCCGAAGGTCAGCAAATTGACATCCTTGTATGCAACGTATGGCACAACAAGAGGAATTGCAAAGGAGAGAAGACAAAGACTGTCTCGCTCTCTTGCAGCTACAGGCAGCAACCAGGTAGACACAGACACCAATGAGAAGAGTGCTGGAATTACTGGAAGAACTCCTTCTGATAACATTTCCTCAGCTGTGAGTCAATCGCCTTCAGATGAGAATAGAAATCCTCAACTAAACGTTAACAATGAGGAGTCTTCTTCTCAATCTTCTGAAGCTTCCAATGAACAAGTAATGTCTTCAGATGCAAGTTCATCTCCTGATCCACAATCCACAAGAAAATCTCCTCTAACTGCAAGAGAAAGATTAAGGGCAGCCCGTGTTCTTAGCCGTTACAACGAATCAAAGACCACCAAATCAGACATGGGCAGCAAAGTATTGGAAGCGTTACGAGAGAGTGATCGTGGGAAGAAAAGGTCGAGGCTTCCCGAAGCGCCTACTAATTTGTTTGATGACAGCAAGCGAGGGATGCCAAAAGCAGGCTTGACTTTTCAGTTCCCTGGGGGTTCAGATCTGCTCGTCATTGCCTTCTCGTTCGTTTTCATTAGCACAGTAATGTTTGCTACCACTTACATTGTGTGGAAAGTTGGTGCAATCCATTTTAATGAGTACTGA ATGCCTATTGATATTCACCAGAAGTTGCAAGCCACTTACGAGAACATTTCGAGATCCACATTTCCGAAGGTCAGCAAATTGACATCCTTGTATGCAACGTATGGCACAACAAGAGGAATTGCAAAGGAGAGAAGACAAAGACTGTCTCGCTCTCTTGCAGCTACAGGCAGCAACCAGGTAGACACAGACACCAATGAGAAGAGTGCTGGAATTACTGGAAGAACTCCTTCTGATAACATTTCCTCAGCTGTGAGTCAATCGCCTTCAGATGAGAATAGAAATCCTCAACTAAACGTTAACAATGAGGAGTCTTCTTCTCAATCTTCTGAAGCTTCCAATGAACAAGTAATGTCTTCAGATGCAAGTTCATCTCCTGATCCACAATCCACAAGAAAATCTCCTCTAACTGCAAGAGAAAGATTAAGGGCAGCCCGTGTTCTTAGCCGTTACAACGAATCAAAGACCACCAAATCAGACATGGGCAGCAAAGTATTGGAAGCGTTACGAGAGAGTGATCGTGGGAAGAAAAGGTCGAGGCTTCCCGAAGCGCCTACTAATTTGTTTGATGACAGCAAGCGAGGGATGCCAAAAGCAGGCTTGACTTTTCAGTTCCCTGGGGGTTCAGATCTGCTCGTCATTGCCTTCTCGTTCGTTTTCATTAGCACAGTAATGTTTGCTACCACTTACATTGTGTGGAAAGTTGGTGCAATCCATTTTAATGAGTACTGA ATGCCTATTGATATTCACCAGAAGTTGCAAGCCACTTACGAGAACATTTCGAGATCCACATTTCCGAAGGTCAGCAAATTGACATCCTTGTATGCAACGTATGGCACAACAAGAGGAATTGCAAAGGAGAGAAGACAAAGACTGTCTCGCTCTCTTGCAGCTACAGGCAGCAACCAGGTAGACACAGACACCAATGAGAAGAGTGCTGGAATTACTGGAAGAACTCCTTCTGATAACATTTCCTCAGCTGTGAGTCAATCGCCTTCAGATGAGAATAGAAATCCTCAACTAAACGTTAACAATGAGGAGTCTTCTTCTCAATCTTCTGAAGCTTCCAATGAACAAGTAATGTCTTCAGATGCAAGTTCATCTCCTGATCCACAATCCACAAGAAAATCTCCTCTAACTGCAAGAGAAAGATTAAGGGCAGCCCGTGTTCTTAGCCGTTACAACGAATCAAAGACCACCAAATCAGACATGGGCAGCAAAGTATTGGAAGCGTTACGAGAGAGTGATCGTGGGAAGAAAAGGTCGAGGCTTCCCGAAGCGCCTACTAATTTGTTTGATGACAGCAAGCGAGGGATGCCAAAAGCAGGCTTGACTTTTCAGTTCCCTGGGGGTTCAGATCTGCTCGTCATTGCCTTCTCGTTCGTTTTCATTAGCACAGTAATGTTTGCTACCACTTACATTGTGTGGAAAGTTGGTGCAATCCATTTTAATGAGTACTGA MPIDIHQKLQATYENISRSTFPKVSKLTSLYATYGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEKSAGITGRTPSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDPQSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNLFDDSKRGMPKAGLTFQFPGGSDLLVIAFSFVFISTVMFATTYIVWKVGAIHFNEY
BLAST of Cp4.1LG01g05580 vs. TrEMBL
Match: A0A0A0KM52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G209990 PE=4 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 5.8e-83 Identity = 187/242 (77.27%), Postives = 205/242 (84.71%), Query Frame = 1
BLAST of Cp4.1LG01g05580 vs. TrEMBL
Match: A0A061FK95_THECC (Differentiation-associated protein 1, putative isoform 1 OS=Theobroma cacao GN=TCM_042476 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 7.6e-51 Identity = 143/246 (58.13%), Postives = 178/246 (72.36%), Query Frame = 1
BLAST of Cp4.1LG01g05580 vs. TrEMBL
Match: A0A061FKZ1_THECC (Differentiation-associated protein 1, putative isoform 2 OS=Theobroma cacao GN=TCM_042476 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 8.4e-50 Identity = 141/245 (57.55%), Postives = 177/245 (72.24%), Query Frame = 1
BLAST of Cp4.1LG01g05580 vs. TrEMBL
Match: V4TBR5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032544mg PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 1.1e-49 Identity = 137/231 (59.31%), Postives = 166/231 (71.86%), Query Frame = 1
BLAST of Cp4.1LG01g05580 vs. TrEMBL
Match: A0A067FZN6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025569mg PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 1.1e-49 Identity = 137/231 (59.31%), Postives = 166/231 (71.86%), Query Frame = 1
BLAST of Cp4.1LG01g05580 vs. TAIR10
Match: AT3G56010.1 (AT3G56010.1 unknown protein) HSP 1 Score: 152.1 bits (383), Expect = 4.3e-37 Identity = 95/155 (61.29%), Postives = 116/155 (74.84%), Query Frame = 1
BLAST of Cp4.1LG01g05580 vs. NCBI nr
Match: gi|659109647|ref|XP_008454805.1| (PREDICTED: uncharacterized protein DDB_G0271670 isoform X1 [Cucumis melo]) HSP 1 Score: 326.6 bits (836), Expect = 3.6e-86 Identity = 194/242 (80.17%), Postives = 207/242 (85.54%), Query Frame = 1
BLAST of Cp4.1LG01g05580 vs. NCBI nr
Match: gi|659109649|ref|XP_008454806.1| (PREDICTED: sericin-2 isoform X2 [Cucumis melo]) HSP 1 Score: 325.5 bits (833), Expect = 8.0e-86 Identity = 193/240 (80.42%), Postives = 206/240 (85.83%), Query Frame = 1
BLAST of Cp4.1LG01g05580 vs. NCBI nr
Match: gi|449460896|ref|XP_004148180.1| (PREDICTED: uncharacterized protein LOC101222663 isoform X1 [Cucumis sativus]) HSP 1 Score: 315.5 bits (807), Expect = 8.3e-83 Identity = 187/242 (77.27%), Postives = 205/242 (84.71%), Query Frame = 1
BLAST of Cp4.1LG01g05580 vs. NCBI nr
Match: gi|778701328|ref|XP_011655002.1| (PREDICTED: uncharacterized protein LOC101222663 isoform X2 [Cucumis sativus]) HSP 1 Score: 313.5 bits (802), Expect = 3.1e-82 Identity = 186/241 (77.18%), Postives = 204/241 (84.65%), Query Frame = 1
BLAST of Cp4.1LG01g05580 vs. NCBI nr
Match: gi|590561822|ref|XP_007008920.1| (Differentiation-associated protein 1, putative isoform 1 [Theobroma cacao]) HSP 1 Score: 208.8 bits (530), Expect = 1.1e-50 Identity = 143/246 (58.13%), Postives = 178/246 (72.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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