Lsi04G010110 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G010110
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	WRKY transcription factor, putative
Location	chr04 : 11399783 .. 11406860 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCAAGATTTTTCCATGGAGGAAGTCATTTCTTTGATCCTTCGTGGGTGTTCTTTGGCAAGGCAATTGGAATTCAATGTTTTAAATTTCGGAAATAATAATATTAATGTTCATCAACCTCATTTCATGGCTCGATCTTGTGATGAGATTTTGACTGTTTTTTCCGCCGCCAAGGACCGGCTGAGCACCCATGAACAACGGCCGCCTTTCACGGCGGTGCAACGGGACGTGGGGTTGGAAGAGTGGCTTAGATCTAGTTGCTCTCAAGCTATGGAGTTGACGCAAATGCAGATCAAATCGCTGTCACCATCGTCTGTGGTGGTGGCGGTGCCGGCAGCTGTGGAGGATTCCGGGAAGCTTATGGCAATGGGTTTTTCTTCTTCTTCGACGAAAGCACGAAGACGGTATTGATTTTTAAACTTATGGTTAAAATGATGTATTGTGTGACGAATTCTTGTTTTTAGGGTTTAAATTGAATTTTTTATCTTTAACTTTGAGATGGTAATGGATGTCCGGTCTTTATAAGTTTAAACATCATATTAATTTAAAATTTCTTTATATATATTTTGGTTCATGTATCTGTAACTAATCATCATATAAACTTCAATTATAGTAGGTTGGGAAAAATATCTTTTTAGTTCTAAGTTTTGAGTCTAGTTTTCATTTGATTTCTAATTTTTAATATTAATGTAGTAAAAAAAAATTGAAGTTAAAAGTGTAAATCTTAAAATTTAAAGACCAAATTGAAACAAATTAACTCAAATTTTAAGGGTAAAATTGTAACATTTTGAAACCCAGGAACTAAGTTGAAATATCAAACGTGTAGCATTTTGAAACATAAGAATCAAATGAAAACTAGATTTGAAATTTAGGGACGAAAAAAGTATGTTGGTTAATATTTTCTATTTTTAATAACAATGAACTCGAATATTTATTTTAGATAATTATAATGGGGTCATTTGTATTAGTTTTAATGCCGAAAATATATGTGAAGTGTTAAATTGATAAAAGTTGATTTAGAGATGATGTTTTTTAGGTTTAATTTAACTAAATCACATAGGAACCGAATCAGAACTAAACTTTAAACCACAATAACCAAAGTGGGTAATTTAACCTAAAACTTCAAAAGAAAAAAAGAAAAAAAAGAAAGAAAGAAGATAATAAAGCTCTAAAGTGGATGGAATTGGGTTTGGTAAACATGGGAAAGGGAAGAATTAAATGGGTTTTTCCACCAAGTTAAGTTAAGTATATAAAGTGTACAATGAAAGAGAAGATAATGCTTCTTTTTTCTTTTTTCACTTTGTTCATCATATGATTAATTGTTTAACTTCTGTTTCATACTGTTTCTTTTTAAATACGAGGGTTAGAGAATTCAAACTACACAATGTTTTATGTTAGTTGTGTTATATACTCGCTTTGGCCTTTGATTTTGTTTTTTGGTTTTTGAAACTTTATGTGTTTGATAACTAAACATTTATATATTCCACTAAATTTCTATCAAAAAAAATTCTATTTGATAATCATTTTGGACCCTTTTGATAACTATTTGTTTTGTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAACTTTTGATTATTTTCTTGCAACTGCTTTACCATGGTTTTCATTGTTTTTAATTAAGTTCTTGAATTCTTCATTAAATTTCTAAAAACAACAATAAGATTTTTTTTTAATAAAAAAATACTTTTTCAAAAACATTGCTTGACTTTTTAAAACACTCATAAAAAGTAGATCACAAAATAAAGTAATCAATGGATGAAAATAATAATATTTATAAGCTTAATTTTCAAAAATTAAAAATCCAAAACCAATAATTATCAAATGGAGCCTTATTTGAAATATAAAAAAACCTATGATTAAGGGTTGTTTTCAAATATAGAGAAATGAGTCAAACTATTTACAAATATAGAGTTTATCAACGATAGACCGCGATAGAAGTCTATCGTGATCTATCGTTGATAAATAGAAGAATTTTTCTATATTGTAAATAATTTGATTTTTTTTTATGTTTATAGTAATTTTCCTATAATTCATAAGTTTCTATGTTTTATAATCATTATCAAAAGGAGCCTAATTTTCTTAATTTTCAAATTTGGACTTTATTTTTTATAACATTCTTAAAAACTAGATAAGAAAATAAAAAAAAAATCAATAAGTTGGACGTAATAATACTTATAAGTTTATTAAACTAAAAAAAAATCAAATGGTTATCAAAATCGACTCTAATATATTGAGTATAGAAGATTTGTATGTTGACGTGAAATGGATTTGAACAGAAAAGATGATACGGAGAAGAGGACGGTGAGGGTAGCGGCGCCGCGCATCGGAAACACAGAGCTGCCGCCCGACGACGGCTTCACATGGCGGAAATATGGACAGAAGGAGATTCTTGGCTCTAGGTTTCCCAGGTTTGTTTTTTTATTTTTCTTTTTCTTTTTTTCTTCATTTTACATTTCCTTTTTTTTTTTTTTTCATTTTTCATTTTCTTTTTTTTTTTCTTTTTTTCTTCATTTTACATTTCCTTTTTTTTTTTTTTTCATTTTTCATTTTCTTTTTTTTTTTCTTTTTTTCTTCATTTTACATTTCCTTTTTTTTTTTTTTTCATTTTTCATTTTCTTTTTTTTTTTCTTTTTTTCTTCATTTTACATTTCCTTTTTTTTTTTTTTTCATTTTTCATTTTCTTTTTTTTTTTCTTTTTTTCTTCATTTTACATTTCCTTTTTTTTTTTTTTTGTGTTCCGTTTTTTAGGTTTTGAAAAATGTTTCGCGTGAATTTTTTGGTATCGTTTGATAATAATTAAATTTTGAGTTCTCTATTTTTGAATTTATGTTTGTTTCTTCATATTTCTTTAGTATTAGTGTTTTCACATTCTTAATTAAGTTGATTTTAAAACCTTGTTTTAATTTTTGAAATTAGGCTAAATATTCTAATGTTTATTTGACAACAAAATAATAATAATTATAAGGAAAATGTGAGAAAACAAACACATTTTAAAAATTTTTAAAAAATTATTATCAAATGAAGCTGAAGTTATTACCATTGCACTCTCCAACTCTATTGTTTGTGAATCTTAAATGATAATAAAAGCTATAAATTAGAAAAGTTTGATTGGGGGATTTAATAAGTTTTTGGATAATTTGAGCTGAAATTAAAGTTTGAATGATACGATGGCAAGAACCCTAAGAAATTATTGTTTACAAATTCATAATTTTGGAAGAAGAATAACATCTCATTTATTATTAAAAAAAATAAATTATATGTCATCTTTTGAAAAAACAAAAAACAAACAGAACTTGCATTTTAAAAATGTCAAGCAATTGATTAAATTGTCTACAAAACTTGCATTAACAAAACTTTACTTTCAATTTTTTGTTTACTTGTAAATTGCCTAATTAGGTATCACAATATTTTGAACTATTAAAATTCATTTTCATCCTTACTGCTTAATTGATTAAATTTAAGAATTCTAATTTTTATTTCATCTATAAAAACTAGCACTTCAATATAATTAACATTCTCTATTAAAGTGAGCTTAGTCTAACGATCATTGACATGATATTCCTCCCTAAAGCTCGAATGATCGATCTCTCATCTTCACAATTGTTATAACACACAAAAAAAAAAAAAAAAATCCTCCTTACAACTAAACTAGAGAATTAACTCAAAGTCAATATTAAATCACAAAAATGAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAGCTTTTTAACAAAAATATATAAAATCCAAATACGTCAAAACCTACATAAAAAAAATTAGTGCCTAAGAAGAATAATCTTGAACGTGACATAAAATGCCTAAATTAAGACAAAATATTTATTATTATTATTATTATTATTATTATTATTATTATTATTACATGACCATAAATCACATGAAAAAAATACTATTAGGCTATTCAGTGAGTAACAACAATTCTTACGCATCTAGTAAAAAACCTAAGAAACAAATTCAAATAAATTACAACTAATTAAGGTGATAATTTAGTCTTATATTGAACTTCGTGATTTAATTGAATAAATAAAAATTTCAAACTTAAAAATGAGTACTGAGTAAGATTAATTTTAGGGGAAAAAAAATCTCCATGTTGTTGGTCTTGAACTCCAAACTTTAGTTTTATCAAATTTCATCTTAAACTTAAATAAAGGTTACAATCTAAATATTAACTTACAAAAAAATATTTCAATTTTAACTCGCTAATAAATTTTTCTCTAAATATTATTAAAAAATATTATATAACAAACGTATAAGATGAAATTGATAAATTTTTAGACAAAAATAATATTAGACCTTTTTCTATTGTTAAAATATATGAATTTTGACAAAACTATTCGATGATTAATAATTTTTTTTCATTGGTCAAACTCATTTTGACAAAAAAAAATTAGTTTAAATTAATGAGTTGATGAAGATTTTTTATTGATTTTTTTTTTTTTTTTTTGTGAAAAGTTAGTGCACGAATTTAGTGAAATTTGAAGTGAGGGTAAAAATTGTACTTTTACATTTTTAGGGAAAATGATTTTTTTTAATAAAATATTAGAAATAAAAAACACAAAACGAAAAGATCTAAGGCCCTAAAAAATAATTGTTCTTTTACATTTTTAGGGAAAATGATTTTTTTAAGAAAAAGTTTGTTTTCTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTTTTTTTTTTTGAAAAAAATAAATTATGTTCATAGATTCACTTTGATTATATAAATAATTGAAGGTTTGACTCATTCAATTCAAAACAAAGTGCTTTGTTCTAAATGTTGGACACCTTTTTTGAATTTGTGACTTATTCTTTGGTCAGTAATTCTTCTGCTTTCAAATATATGTGTCTTTTTCTTTAATTAATCTTTCCATGCCTTGTGGAATTTTCATTTCTTCCACCTTCAAATTCAAACTTATTTGATTAACAATTGACATTTAATCTACTAATTTTCTTTTTTAATTATTACTTAATTGCTTTTAGAAGTTGTTTTAAGACAGTATTTAAGGTTAAAAGTAAAATATTTTAATGGTAAGGAGAGTAAGAGTAATTAAATGATTGTTTGATAACTTAATTTGATAATAAGAAATTTGAAATACTGATTTGTGTTTATAACATGTTGTATTTATTAACGTATAAATTCTAAGATATATTTTTTTTTATTAAATTTACTTTTAAACTTCAAATGATAATGTTTTGTAAATTACTTTCCTAGGAAGCAATTCATGAGGTTTAGTTATTAAACCGCTTTAACATTTTATTGATATTTCCTGAAGTATTGTTTTCGTCATTTTTCCATTTGATTAATATTTATCCGTTATTAGAAAACCCTATATAGAAAAGTACTTTTTAAAATACTAATTTAAACCCTAACAAAATAAAATTTTTAGAATTGAAATATTTAGCAAATATTAACGTATGGACACATCACAAAGAAATCAAATATTAGTCAAACTTAAAAAATATCCTTTTTTTTTTTCTTTTTTTAAATATCTCCTACATGCTTTTATCCTTTAAATATGATTAAAAATTCAAAAGTACATAAAAAGAAAATTCAATGTAGTTACAAATTTAATCCTACATAATTTCAATTAGGTCCCTATAATTTTAAAATTTTGAATTTCATTTTTATTATTTAGACATTTCAATTTCATCTTTAAATTTATTTGACAACTTATATTATATATTTTTTGTTACCATATCATATACGTGATACATTTTTTTCATTTGCATGACGATAAGGGTAACATTTTTTGTTTGATTAACAATATGTTAATTGACCCTTTTGTAATTATTAAAAGTGAATAAAAAATAAAAATAGAAGATTTTTTCACTCTAAAAGAGTATTTGAAATCATTTGTGATATATAATCAAATTATATTGTTAAATTAAAACTTTTTAAACTATAATAGTCAAATTAAAATTGAGCTCAAATCATAGACATTAAATAGAAAAACATGTAAGAATATAGGAAGCAAATTAAAATTAAACTAAAAAAACACAAAATATAATTAAATTATATTTAAAAAAAATCCTAAGGGGTAAAAATGTAATTATAGTCATCATCTTCTCCATTTTCCTTTTGCAGAGGCTATTTCAGATGCACCCACCAGAAGCTCTATCACTGCCCGGCCAAAAAGCACGTGCAACGTCTCGACGACGATCCCCACACGTTCGAAGTCACCTACCGCAGCGACCACACGTGCCACATGTCCGCCACCGCCCCCTCTGCTCCGCCACCGCCGCCGCCGGGCGTCGCCGGCGGCCAACAAATATCCCAGTTCCGGCCCCCCTCCGCCGGATGGCTTTCAATGGAGGTCGTCGGTTCTGCTGCAAGTGGGTCGGCCTCCGGCGGTCCGGCAACCGTACGATACGGGAAAGAAATCGCCGATCAGTTTCCGGTGGTGGACCTGGCTGACGTCATGTTCAACTCCGGCACGGGCAGTAGTAATAGTATGGAGTCTATCTTCGCCGCTTACGTGGCGGACGATCACCATCACAAGTGGGAGAAAGACGACAAGAAGAATTAG

mRNA sequence

ATTCAAGATTTTTCCATGGAGGAAGTCATTTCTTTGATCCTTCGTGGGTGTTCTTTGGCAAGGCAATTGGAATTCAATGTTTTAAATTTCGGAAATAATAATATTAATGTTCATCAACCTCATTTCATGGCTCGATCTTGTGATGAGATTTTGACTGTTTTTTCCGCCGCCAAGGACCGGCTGAGCACCCATGAACAACGGCCGCCTTTCACGGCGGTGCAACGGGACGTGGGGTTGGAAGAGTGGCTTAGATCTAGTTGCTCTCAAGCTATGGAGTTGACGCAAATGCAGATCAAATCGCTGTCACCATCGTCTGTGGTGGTGGCGGTGCCGGCAGCTGTGGAGGATTCCGGGAAGCTTATGGCAATGGGTTTTTCTTCTTCTTCGACGAAAGCACGAAGACGAAAAGATGATACGGAGAAGAGGACGGTGAGGGTAGCGGCGCCGCGCATCGGAAACACAGAGCTGCCGCCCGACGACGGCTTCACATGGCGGAAATATGGACAGAAGGAGATTCTTGGCTCTAGGTTTCCCAGAGGCTATTTCAGATGCACCCACCAGAAGCTCTATCACTGCCCGGCCAAAAAGCACGTGCAACGTCTCGACGACGATCCCCACACGTTCGAAGTCACCTACCGCAGCGACCACACGTGCCACATGTCCGCCACCGCCCCCTCTGCTCCGCCACCGCCGCCGCCGGGCGTCGCCGGCGGCCAACAAATATCCCAGTTCCGGCCCCCCTCCGCCGGATGGCTTTCAATGGAGGTCGTCGGTTCTGCTGCAAGTGGGTCGGCCTCCGGCGGTCCGGCAACCGTACGATACGGGAAAGAAATCGCCGATCAGTTTCCGGTGGTGGACCTGGCTGACGTCATGTTCAACTCCGGCACGGGCAGTAGTAATAGTATGGAGTCTATCTTCGCCGCTTACGTGGCGGACGATCACCATCACAAGTGGGAGAAAGACGACAAGAAGAATTAG

Coding sequence (CDS)

ATTCAAGATTTTTCCATGGAGGAAGTCATTTCTTTGATCCTTCGTGGGTGTTCTTTGGCAAGGCAATTGGAATTCAATGTTTTAAATTTCGGAAATAATAATATTAATGTTCATCAACCTCATTTCATGGCTCGATCTTGTGATGAGATTTTGACTGTTTTTTCCGCCGCCAAGGACCGGCTGAGCACCCATGAACAACGGCCGCCTTTCACGGCGGTGCAACGGGACGTGGGGTTGGAAGAGTGGCTTAGATCTAGTTGCTCTCAAGCTATGGAGTTGACGCAAATGCAGATCAAATCGCTGTCACCATCGTCTGTGGTGGTGGCGGTGCCGGCAGCTGTGGAGGATTCCGGGAAGCTTATGGCAATGGGTTTTTCTTCTTCTTCGACGAAAGCACGAAGACGAAAAGATGATACGGAGAAGAGGACGGTGAGGGTAGCGGCGCCGCGCATCGGAAACACAGAGCTGCCGCCCGACGACGGCTTCACATGGCGGAAATATGGACAGAAGGAGATTCTTGGCTCTAGGTTTCCCAGAGGCTATTTCAGATGCACCCACCAGAAGCTCTATCACTGCCCGGCCAAAAAGCACGTGCAACGTCTCGACGACGATCCCCACACGTTCGAAGTCACCTACCGCAGCGACCACACGTGCCACATGTCCGCCACCGCCCCCTCTGCTCCGCCACCGCCGCCGCCGGGCGTCGCCGGCGGCCAACAAATATCCCAGTTCCGGCCCCCCTCCGCCGGATGGCTTTCAATGGAGGTCGTCGGTTCTGCTGCAAGTGGGTCGGCCTCCGGCGGTCCGGCAACCGTACGATACGGGAAAGAAATCGCCGATCAGTTTCCGGTGGTGGACCTGGCTGACGTCATGTTCAACTCCGGCACGGGCAGTAGTAATAGTATGGAGTCTATCTTCGCCGCTTACGTGGCGGACGATCACCATCACAAGTGGGAGAAAGACGACAAGAAGAATTAG

Protein sequence

IQDFSMEEVISLILRGCSLARQLEFNVLNFGNNNINVHQPHFMARSCDEILTVFSAAKDRLSTHEQRPPFTAVQRDVGLEEWLRSSCSQAMELTQMQIKSLSPSSVVVAVPAAVEDSGKLMAMGFSSSSTKARRRKDDTEKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRSDHTCHMSATAPSAPPPPPPGVAGGQQISQFRPPSAGWLSMEVVGSAASGSASGGPATVRYGKEIADQFPVVDLADVMFNSGTGSSNSMESIFAAYVADDHHHKWEKDDKKN

Homology

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BLAST of Lsi04G010110 vs. Swiss-Prot
Match: WRK55_ARATH (WRKY transcription factor 55 OS=Arabidopsis thaliana GN=WRKY55 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.6e-44
Identity = 134/326 (41.10%), Postives = 177/326 (54.29%), Query Frame = 1


Query: 4   FSMEEVISLILRGCSLARQLEFNVLNFGNNNINVHQPHFMARSCDEILTVFSAAKDRL-- 63
           + MEEV+S+I  G  L + LE        +++    P  +  S DEI+  FS A +RL  
Sbjct: 9   YQMEEVMSMIFHGMKLVKSLE--------SSLPEKPPESLLTSLDEIVKTFSDANERLKM 68

Query: 64  ---------STHEQRPPFTAV------QRDVGL--EEWLR---SSCSQAME-LTQMQIKS 123
                    + ++ +P   +V      Q + GL  E WLR   S+ SQ  E + Q Q+ +
Sbjct: 69  LLEIKNSETALNKTKPVIVSVANQMLMQMEPGLMQEYWLRYGGSTSSQGTEAMFQTQLMA 128

Query: 124 LSPSSVVVAVPAAVEDSGKLMAMGFSSSSTKARRRKDDTEKRTVRVAAPRIGNTELPPDD 183
           +        + AAVE SG   A G  SS+ + RRRKD+ E++TV VAA R GNT+LPPDD
Sbjct: 129 VDGGGER-NLTAAVERSG---ASG--SSTPRQRRRKDEGEEQTVLVAALRTGNTDLPPDD 188

Query: 184 GFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRSDHTCHM 243
             TWRKYGQKEILGSRFPR Y+RCTHQKLY+CPAKK VQRL+DDP TF VTYR  HTC+ 
Sbjct: 189 NHTWRKYGQKEILGSRFPRAYYRCTHQKLYNCPAKKQVQRLNDDPFTFRVTYRGSHTCY- 248

Query: 244 SATAPSAPPPPPPGVAGGQQISQFRPPSAGWLSMEVVGSAASGSASGGPATVRYGKEIAD 303
           ++TAP+A    P  +                     + S  +G       +V YG  + D
Sbjct: 249 NSTAPTASSATPSTIP--------------------ISSVTTGH------SVDYGLAVVD 286

Query: 304 QFPVVDLADVMFNSGTGSSNSMESIF 307
                 +ADVMF SG G   +M+ IF
Sbjct: 309 ------MADVMFGSG-GVGTNMDFIF 286

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BLAST of Lsi04G010110 vs. Swiss-Prot
Match: WRK53_ARATH (Probable WRKY transcription factor 53 OS=Arabidopsis thaliana GN=WRKY53 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.0e-19
Identity = 74/241 (30.71%), Postives = 116/241 (48.13%), Query Frame = 1


Query: 4   FSMEEVISLILRGCSLARQLEFNVLNFGNNNINVHQPHFMARSCDEILTVFSAAKDRLST 63
           +  + ++S ++ G   A++L+  +    + + +   P       +EIL      K  +S+
Sbjct: 9   WEQKTLLSELINGFDAAKKLQARLREAPSPSSSFSSPATAVAETNEILV-----KQIVSS 68

Query: 64  HEQRPPFTAVQRDVGLEEWLRSSCSQAMELTQMQIKSLSPSSVVVAVPAAVEDSGKLMAM 123
           +E         R + L  W  S   Q +      +   +P SV  + PA++  S +    
Sbjct: 69  YE---------RSLLLLNWSSSPSVQLIPTPVTVVPVANPGSVPES-PASINGSPRSEEF 128

Query: 124 GFSSSSTKARRRKD---DTEKRT--------VRVAAPRIGNTELPPDDGFTWRKYGQKEI 183
                S+++  R+D   +++KR         VR++  R    E P DD F+WRKYGQK+I
Sbjct: 129 ADGGGSSESHHRQDYIFNSKKRKMLPKWSEKVRISPER--GLEGPQDDVFSWRKYGQKDI 188

Query: 184 LGSRFPRGYFRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRSDHTCHMSATAPSAPPPPP 234
           LG++FPR Y+RCTH+   +C A K VQR D D   FEVTYR  HTC  + T    PP   
Sbjct: 189 LGAKFPRSYYRCTHRSTQNCWATKQVQRSDGDATVFEVTYRGTHTCSQAIT--RTPPLAS 230

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BLAST of Lsi04G010110 vs. Swiss-Prot
Match: WRK70_ARATH (Probable WRKY transcription factor 70 OS=Arabidopsis thaliana GN=WRKY70 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 8.1e-17
Identity = 52/131 (39.69%), Postives = 73/131 (55.73%), Query Frame = 1


Query: 101 LSPSSVVVAVP----AAVEDSGKLMAMGFSSSSTKARRRKDDTEKRTVRVAAPRIGNTEL 160
           +S SS + AV     A+ ++ GK    G S       + K    KR  R     I +T L
Sbjct: 60  ISSSSSLAAVEGSQNASCDNDGKFEDSGDSRKRLGPVKGKRGCYKRKKRSETCTIESTIL 119

Query: 161 PPDDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRSDH 220
             +D F+WRKYGQKEIL ++FPR YFRCTH+    C A K VQ+++ +P  F +TY  +H
Sbjct: 120 --EDAFSWRKYGQKEILNAKFPRSYFRCTHKYTQGCKATKQVQKVELEPKMFSITYIGNH 179

Query: 221 TCHMSATAPSA 228
           TC+ +A  P +
Sbjct: 180 TCNTNAETPKS 188

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BLAST of Lsi04G010110 vs. Swiss-Prot
Match: WRK41_ARATH (Probable WRKY transcription factor 41 OS=Arabidopsis thaliana GN=WRKY41 PE=2 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 1.1e-16
Identity = 59/156 (37.82%), Postives = 80/156 (51.28%), Query Frame = 1


Query: 83  LRSSCSQAMELTQMQIKSLSPSSVVVAVPAAV------EDSGKLMAMGFSSSSTKARRRK 142
           L  S +Q     ++    L+    V   PA++      E+   + +  F+ SS K +   
Sbjct: 63  LNGSTTQHNPTIELAPDPLAHPGKVPGSPASITGNPRSEEFFNVRSKEFNLSSKKRKMLP 122

Query: 143 DDTEKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKK 202
             TE+  VR++  R    E P DD F+WRKYGQK+ILG++FPR Y+RCT +   +C A K
Sbjct: 123 KWTEQ--VRISPER--GLEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYCWATK 182

Query: 203 HVQRLDDDPHTFEVTYRSDHTCHMSATAPSAPPPPP 233
            VQR D DP  FEVTYR  HTC      P      P
Sbjct: 183 QVQRSDGDPTIFEVTYRGTHTCSQGIPLPEKRETKP 214

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BLAST of Lsi04G010110 vs. Swiss-Prot
Match: WRK30_ARATH (Probable WRKY transcription factor 30 OS=Arabidopsis thaliana GN=WRKY30 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.1e-16
Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 1


Query: 159 DDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRSDHTC 218
           DDGF+WRKYGQK+ILG++FPRGY+RCT++K   C A K VQR D++    E++YR  H+C
Sbjct: 113 DDGFSWRKYGQKDILGAKFPRGYYRCTYRKSQGCEATKQVQRSDENQMLLEISYRGIHSC 172

Query: 219 HMSATAPSAPP 230
             +A   +  P
Sbjct: 173 SQAANVGTTMP 183

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BLAST of Lsi04G010110 vs. TrEMBL
Match: A0A140H8T2_MANES (WRKY transcription factor 78 OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 7.5e-78
Identity = 174/329 (52.89%), Postives = 218/329 (66.26%), Query Frame = 1


Query: 6   MEEVISLILRGCSLARQLEFNVLNFGNNNINVHQPHFMARSCDEILTVFSAAKDRLSTHE 65
           M+E ISLIL+G  LA+ LE  V      N+  HQ   M    DEI+ VF +A++RLS+H+
Sbjct: 1   MDEFISLILQGVKLAKDLEPAV-----QNLATHQNQEMISKLDEIIRVFISARERLSSHQ 60

Query: 66  QRPPFTAVQR----DVGLEE-WLRSSCSQAMELTQMQIKSLSPSSVVVAVPA----AVED 125
                   Q+    D  L+E WLR+   +  + +Q+  + +S SS +    A    A+E 
Sbjct: 61  DVSQMLQQQQQPQIDPSLQEYWLRTKMVELFQ-SQLMAERMSSSSGLENKQAEGGLAMEL 120

Query: 126 SGKLMAMGFSSSSTKARRRKDDTEKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSR 185
           SG+ +    SSS+ + RRRKDD +KRT+RV APR+GNTE+PP+DG+TWRKYGQKEILGSR
Sbjct: 121 SGRDVQAMASSSAQRPRRRKDDADKRTMRVPAPRMGNTEIPPEDGYTWRKYGQKEILGSR 180

Query: 186 FPRGYFRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRSDHTCHMSATAPSAPPPPPPGVA 245
           FPRGY+RCTHQKLY CPAKK VQRLDDDP+TFEVTYR DH CHMSATAPS PPP  P + 
Sbjct: 181 FPRGYYRCTHQKLYQCPAKKQVQRLDDDPYTFEVTYRGDHICHMSATAPSVPPPQLPEIT 240

Query: 246 GGQQISQFRPPSAGWLSMEVVGSAASGSASGGPATVRYGKEIADQFPVVDLADVMFNSGT 305
                S        WL   + GS +S  A+ GP+TVRYGKE   +FPV D+ADVMFNSG+
Sbjct: 241 REMTQSAMAAQPPPWLEFSLGGSGSS-MAAAGPSTVRYGKEA--EFPVADMADVMFNSGS 300

Query: 306 GSSNSMESIFAAYVADDHHHKWEKDDKKN 326
            SSNSMESIF  Y+      KWE ++KKN
Sbjct: 301 SSSNSMESIF-TYM----EGKWEPEEKKN 315

[Close]

BLAST of Lsi04G010110 vs. TrEMBL
Match: A0A061FSX1_THECC (WRKY DNA-binding protein 55, putative OS=Theobroma cacao GN=TCM_045555 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.5e-73
Identity = 183/378 (48.41%), Postives = 228/378 (60.32%), Query Frame = 1


Query: 3   DFSMEEVISLILRGCSLARQLEFNVLNFGNNNINVHQPHFMARSCDEILTVFSAAKDRLS 62
           D +MEE  SL+L GC LA+ LE N+ N  N      QP  +++SCD+I+ VF+AAK+RL+
Sbjct: 15  DQTMEETFSLMLHGCKLAKDLESNLGNLAN------QPEILSKSCDDIVKVFAAAKERLN 74

Query: 63  THEQRPPFTAVQR-------------DVGLEEWLRSSC-SQAMELTQMQI---------- 122
             +    FT + R             D  L+EWL+    +QAM++ Q QI          
Sbjct: 75  ADQDPALFTQLLRQSPSSSQQPQQSTDPSLQEWLKYGVITQAMDMIQQQILAGKAPLETN 134

Query: 123 ----KSLSPSSVVVAVPAAVEDSGKLMAM-------GFSSSSTKARR-RKDDTEKRTVRV 182
               K+L   S    +  +V   G++ AM       G SSSS + RR RKDD EK T+ V
Sbjct: 135 EMGGKNLLEGSASAPLKGSV--GGEIQAMELSDSGRGSSSSSQRPRRSRKDDEEKCTMTV 194

Query: 183 AAPRIGNTELPPDDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDDDPH 242
            AP++GNT+LPP+D FTWRKYGQKEILGSR+PR Y+RCTHQKLY+CPAKK VQRLD+D +
Sbjct: 195 PAPQMGNTDLPPEDNFTWRKYGQKEILGSRYPRAYYRCTHQKLYNCPAKKQVQRLDNDFY 254

Query: 243 TFEVTYRSDHTCHMSATAPSAPPPPPPGVAGGQQI------SQFRPPSAG------WLSM 302
           TFEVTY   HTCHMS+TAPS PPPPP       QI      SQ  P S+       WLSM
Sbjct: 255 TFEVTYIGQHTCHMSSTAPSIPPPPPLETGTQDQIMTQAMVSQPTPASSSSVPLGRWLSM 314

Query: 303 EV--VGSAASGSASGG----PATVRYGKEIADQFPVV-DLADVMFNSGTGSSNSMESIFA 326
           E   + SA+ GS SGG     AT RYG+E+   +PVV D+ADVMFNSG+ SSNSME IF 
Sbjct: 315 EFTSLASASCGSGSGGAGGSTATARYGREV--DYPVVADMADVMFNSGSSSSNSMEFIFP 374

[Close]

BLAST of Lsi04G010110 vs. TrEMBL
Match: S5CH76_JATCU (Uncharacterized protein OS=Jatropha curcas GN=WRKY55 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 4.3e-73
Identity = 168/340 (49.41%), Postives = 213/340 (62.65%), Query Frame = 1


Query: 6   MEEVISLILRGCSLARQLEFNVLNFGNNNINVHQPHFMARSCDEILTVFSAAKDRLSTHE 65
           M+E ISLIL G  L+++LE  + N  N          M    DEI+ VF  A++RL+  +
Sbjct: 1   MDEFISLILHGIQLSKELEPTLQNLANKQ------EIMLSKLDEIIRVFVTARERLNAQD 60

Query: 66  Q--------RPPFTAVQRDVGLEE-WLRSSCSQAMELTQMQI----KSLSPSSVVVAVPA 125
                    R      Q D  L E WL+S   + ME+ Q Q+    +S     + +  P+
Sbjct: 61  PSSYSQMLFRESQQPHQVDPSLREYWLKS---KMMEMLQTQLIADQRSSGSGGLEMGSPS 120

Query: 126 ---AVEDSGKLMAMGFSSSSTKARRRKDDTEKRTVRVAAPRIGNTELPPDDGFTWRKYGQ 185
              A+E + K      +SSS + RRRKDD EK+T+RV APR+GNTE+PP+DG+TWRKYGQ
Sbjct: 121 GGLAMEIASKSDVQAVASSSQRPRRRKDDAEKKTIRVPAPRMGNTEIPPEDGYTWRKYGQ 180

Query: 186 KEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRSDHTCHMSATAPSAPP 245
           KEILGSRFPRGY+RCTHQKLY CPAKK VQRLDDDPHTFEVTYR DHTCHMS+TAPS PP
Sbjct: 181 KEILGSRFPRGYYRCTHQKLYQCPAKKQVQRLDDDPHTFEVTYRGDHTCHMSSTAPSVPP 240

Query: 246 PPPPGVAGGQQISQ---FRPPSAGWLSMEVVGSAASGSASG-GPATVRYGKEIADQFPVV 305
                +   Q+++Q    +PP+  WL   + G    GS SG GP+T R+GKE   ++PV 
Sbjct: 241 -----LQITQEMTQNMATQPPA--WLEFTLGGGGGRGSGSGAGPSTARFGKEA--EYPVA 300

Query: 306 DLADVMFNSGTGSSNSMESIFAAYVADDHHHKWEKDDKKN 326
           D+AD MFNSG+ SSNSME IF A        KWE ++KKN
Sbjct: 301 DMADAMFNSGSSSSNSMELIFTAM-----EDKWEPEEKKN 317

[Close]

BLAST of Lsi04G010110 vs. TrEMBL
Match: A0A140H8R0_MANES (WRKY transcription factor 56 OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 8.3e-69
Identity = 159/324 (49.07%), Postives = 209/324 (64.51%), Query Frame = 1


Query: 6   MEEVISLILRGCSLARQLEFNVLNFGNNNINVHQPHFMARSCDEILTVFSAAKDRLSTHE 65
           M E ISLIL+G  LA+ LE  +      N+  H    M  + DEI+ VF +A++RL+ H+
Sbjct: 1   MNEFISLILKGMKLAKDLEPTL-----QNLATHNYQHMLSNLDEIIRVFISARERLNAHQ 60

Query: 66  QRPP--FTAVQR----DVGLEE-WLRSSCSQAMELTQMQIKSLSPSSVVVAVPAA----V 125
             P   F  +Q+    D  L+E WLR+   + ++ +Q++ + +  SS +    AA    +
Sbjct: 61  DLPQMLFRELQQQPQIDPRLQEYWLRTKMME-LQHSQLEAERIGISSGMENKQAAGGTQM 120

Query: 126 EDSGKLMAMGF-------SSSSTKARRRKDDTEKRTVRVAAPRIGNTELPPDDGFTWRKY 185
             +   M +G        SSS+ + RRRKDD E RT+R AAPR+GNTE+PP+DG+TWRKY
Sbjct: 121 GSANLAMELGSRDVQAMASSSTQRQRRRKDDEEYRTIRAAAPRMGNTEIPPEDGYTWRKY 180

Query: 186 GQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRSDHTCHMSATAPSA 245
           GQKEILGSRFPR Y+RCTH KLY CPAKK VQRLDDDP+TFEVTYR DHTCHMS TAPS 
Sbjct: 181 GQKEILGSRFPRSYYRCTHLKLYQCPAKKQVQRLDDDPYTFEVTYRGDHTCHMSDTAPSV 240

Query: 246 PPPPPPGVAGGQQISQ---FRPPSAGWLSMEVVGSAASGSASGGPATVRYGKEIADQFPV 305
           PPP        Q+++Q    +PP    L   + G  + GS+  GP+TVRYGKE+  ++ V
Sbjct: 241 PPP-----VITQEVTQSMAAQPPPR--LQFRLGGGGSGGSSGSGPSTVRYGKEV--EYLV 300

Query: 306 VDLADVMFNSGTGSSNSMESIFAA 309
            D+ADVMFNSG+ SSNSME IF +
Sbjct: 301 ADMADVMFNSGSSSSNSMELIFTS 309

[Close]

BLAST of Lsi04G010110 vs. TrEMBL
Match: F6HC34_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g03130 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 8.3e-69
Identity = 161/377 (42.71%), Postives = 215/377 (57.03%), Query Frame = 1


Query: 6   MEEVISLILRGCSLARQLEFNVLNFGNNNINVHQPHFMARSCDEILTVFSAAKDRLSTHE 65
           MEE +S I+RGC LAR+LE N+ N         QP  +A+SCDEI+ +F  AK+RL+  +
Sbjct: 1   MEETLSHIVRGCKLARELESNIPNLAK------QPRMLAKSCDEIMKIFGTAKERLNAQD 60

Query: 66  QRPPF-------TAVQRDVGLEEWLRSSCSQAME----LTQMQIKSLSPSSVV------- 125
               +       + ++    ++EWL++S  QA++    LT+ ++  + P ++        
Sbjct: 61  DHSAYPYMFAQASGMETSGEMQEWLKTSYLQALQAQYGLTESKVGGIEPVTLSGHPGFEL 120

Query: 126 -----VAVPAAVEDSGKLMAMGFS----SSSTKARRRKDDTEKRTVRVAAPRIGNTELPP 185
                     +    G+  AM  S    S+S + RRRKDD  KR   VAAPRIGNT++PP
Sbjct: 121 GGRDREGSARSTGSGGEFQAMEGSDSGNSNSQRLRRRKDDIRKRKETVAAPRIGNTDIPP 180

Query: 186 DDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRSDHTC 245
           DD FTWRKYGQKEILGS++PR Y+RCTHQKLY+CPAKK VQRL+ DP  F++TY  DHTC
Sbjct: 181 DDNFTWRKYGQKEILGSKYPRSYYRCTHQKLYNCPAKKQVQRLEHDPFMFDITYIDDHTC 240

Query: 246 HMSATAPSAPPPPPPGVAGGQQISQFRPPSAGWLSMEV--VGSAAS-------------- 305
           H SATAPS PPPPP       Q +  + P   WLSME+   G AA+              
Sbjct: 241 HKSATAPSVPPPPPEVTPEMIQATTAQLPMGRWLSMELKPTGEAANAFVDHSQVQMHVDL 300

Query: 306 -------------GSASGGPATVRYGKEIADQFPVVDLADVMFNSGTGSSNSMESIFAAY 326
                        G ++ GP+ VR+G+E   ++PVVDLAD MFNSG+ SSNSM+ +F   
Sbjct: 301 GLGEGSSSSMVGTGGSTAGPSMVRFGREA--EYPVVDLADTMFNSGSSSSNSMDFLFT-- 360

[Close]

BLAST of Lsi04G010110 vs. TAIR10
Match: AT2G40740.1 (AT2G40740.1 WRKY DNA-binding protein 55)

HSP 1 Score: 181.4 bits (459), Expect = 8.8e-46
Identity = 134/326 (41.10%), Postives = 177/326 (54.29%), Query Frame = 1


Query: 4   FSMEEVISLILRGCSLARQLEFNVLNFGNNNINVHQPHFMARSCDEILTVFSAAKDRL-- 63
           + MEEV+S+I  G  L + LE        +++    P  +  S DEI+  FS A +RL  
Sbjct: 9   YQMEEVMSMIFHGMKLVKSLE--------SSLPEKPPESLLTSLDEIVKTFSDANERLKM 68

Query: 64  ---------STHEQRPPFTAV------QRDVGL--EEWLR---SSCSQAME-LTQMQIKS 123
                    + ++ +P   +V      Q + GL  E WLR   S+ SQ  E + Q Q+ +
Sbjct: 69  LLEIKNSETALNKTKPVIVSVANQMLMQMEPGLMQEYWLRYGGSTSSQGTEAMFQTQLMA 128

Query: 124 LSPSSVVVAVPAAVEDSGKLMAMGFSSSSTKARRRKDDTEKRTVRVAAPRIGNTELPPDD 183
           +        + AAVE SG   A G  SS+ + RRRKD+ E++TV VAA R GNT+LPPDD
Sbjct: 129 VDGGGER-NLTAAVERSG---ASG--SSTPRQRRRKDEGEEQTVLVAALRTGNTDLPPDD 188

Query: 184 GFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRSDHTCHM 243
             TWRKYGQKEILGSRFPR Y+RCTHQKLY+CPAKK VQRL+DDP TF VTYR  HTC+ 
Sbjct: 189 NHTWRKYGQKEILGSRFPRAYYRCTHQKLYNCPAKKQVQRLNDDPFTFRVTYRGSHTCY- 248

Query: 244 SATAPSAPPPPPPGVAGGQQISQFRPPSAGWLSMEVVGSAASGSASGGPATVRYGKEIAD 303
           ++TAP+A    P  +                     + S  +G       +V YG  + D
Sbjct: 249 NSTAPTASSATPSTIP--------------------ISSVTTGH------SVDYGLAVVD 286

Query: 304 QFPVVDLADVMFNSGTGSSNSMESIF 307
                 +ADVMF SG G   +M+ IF
Sbjct: 309 ------MADVMFGSG-GVGTNMDFIF 286

[Close]

BLAST of Lsi04G010110 vs. TAIR10
Match: AT4G23810.1 (AT4G23810.1 WRKY family transcription factor)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-20
Identity = 74/241 (30.71%), Postives = 116/241 (48.13%), Query Frame = 1


Query: 4   FSMEEVISLILRGCSLARQLEFNVLNFGNNNINVHQPHFMARSCDEILTVFSAAKDRLST 63
           +  + ++S ++ G   A++L+  +    + + +   P       +EIL      K  +S+
Sbjct: 9   WEQKTLLSELINGFDAAKKLQARLREAPSPSSSFSSPATAVAETNEILV-----KQIVSS 68

Query: 64  HEQRPPFTAVQRDVGLEEWLRSSCSQAMELTQMQIKSLSPSSVVVAVPAAVEDSGKLMAM 123
           +E         R + L  W  S   Q +      +   +P SV  + PA++  S +    
Sbjct: 69  YE---------RSLLLLNWSSSPSVQLIPTPVTVVPVANPGSVPES-PASINGSPRSEEF 128

Query: 124 GFSSSSTKARRRKD---DTEKRT--------VRVAAPRIGNTELPPDDGFTWRKYGQKEI 183
                S+++  R+D   +++KR         VR++  R    E P DD F+WRKYGQK+I
Sbjct: 129 ADGGGSSESHHRQDYIFNSKKRKMLPKWSEKVRISPER--GLEGPQDDVFSWRKYGQKDI 188

Query: 184 LGSRFPRGYFRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRSDHTCHMSATAPSAPPPPP 234
           LG++FPR Y+RCTH+   +C A K VQR D D   FEVTYR  HTC  + T    PP   
Sbjct: 189 LGAKFPRSYYRCTHRSTQNCWATKQVQRSDGDATVFEVTYRGTHTCSQAIT--RTPPLAS 230

[Close]

BLAST of Lsi04G010110 vs. TAIR10
Match: AT3G56400.1 (AT3G56400.1 WRKY DNA-binding protein 70)

HSP 1 Score: 89.4 bits (220), Expect = 4.6e-18
Identity = 52/131 (39.69%), Postives = 73/131 (55.73%), Query Frame = 1


Query: 101 LSPSSVVVAVP----AAVEDSGKLMAMGFSSSSTKARRRKDDTEKRTVRVAAPRIGNTEL 160
           +S SS + AV     A+ ++ GK    G S       + K    KR  R     I +T L
Sbjct: 60  ISSSSSLAAVEGSQNASCDNDGKFEDSGDSRKRLGPVKGKRGCYKRKKRSETCTIESTIL 119

Query: 161 PPDDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRSDH 220
             +D F+WRKYGQKEIL ++FPR YFRCTH+    C A K VQ+++ +P  F +TY  +H
Sbjct: 120 --EDAFSWRKYGQKEILNAKFPRSYFRCTHKYTQGCKATKQVQKVELEPKMFSITYIGNH 179

Query: 221 TCHMSATAPSA 228
           TC+ +A  P +
Sbjct: 180 TCNTNAETPKS 188

[Close]

BLAST of Lsi04G010110 vs. TAIR10
Match: AT4G11070.1 (AT4G11070.1 WRKY family transcription factor)

HSP 1 Score: 89.0 bits (219), Expect = 6.0e-18
Identity = 59/156 (37.82%), Postives = 80/156 (51.28%), Query Frame = 1


Query: 83  LRSSCSQAMELTQMQIKSLSPSSVVVAVPAAV------EDSGKLMAMGFSSSSTKARRRK 142
           L  S +Q     ++    L+    V   PA++      E+   + +  F+ SS K +   
Sbjct: 63  LNGSTTQHNPTIELAPDPLAHPGKVPGSPASITGNPRSEEFFNVRSKEFNLSSKKRKMLP 122

Query: 143 DDTEKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKK 202
             TE+  VR++  R    E P DD F+WRKYGQK+ILG++FPR Y+RCT +   +C A K
Sbjct: 123 KWTEQ--VRISPER--GLEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYCWATK 182

Query: 203 HVQRLDDDPHTFEVTYRSDHTCHMSATAPSAPPPPP 233
            VQR D DP  FEVTYR  HTC      P      P
Sbjct: 183 QVQRSDGDPTIFEVTYRGTHTCSQGIPLPEKRETKP 214

[Close]

BLAST of Lsi04G010110 vs. TAIR10
Match: AT5G24110.1 (AT5G24110.1 WRKY DNA-binding protein 30)

HSP 1 Score: 89.0 bits (219), Expect = 6.0e-18
Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 1


Query: 159 DDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRSDHTC 218
           DDGF+WRKYGQK+ILG++FPRGY+RCT++K   C A K VQR D++    E++YR  H+C
Sbjct: 113 DDGFSWRKYGQKDILGAKFPRGYYRCTYRKSQGCEATKQVQRSDENQMLLEISYRGIHSC 172

Query: 219 HMSATAPSAPP 230
             +A   +  P
Sbjct: 173 SQAANVGTTMP 183

[Close]

BLAST of Lsi04G010110 vs. NCBI nr
Match: gi|659114237|ref|XP_008456967.1| (PREDICTED: WRKY transcription factor 55 [Cucumis melo])

HSP 1 Score: 510.4 bits (1313), Expect = 2.4e-141
Identity = 267/325 (82.15%), Postives = 283/325 (87.08%), Query Frame = 1


Query: 6   MEEVISLILRGCSLARQLEFNVLNFGNNNINVH-QPHFMARSCDEILTVFSAAKDRLSTH 65
           MEE ISLILRGCSLARQLEFNVLN GNNNIN+  Q HFMARSCDEIL VFSAAKDRLS+H
Sbjct: 1   MEEAISLILRGCSLARQLEFNVLNLGNNNINMSDQSHFMARSCDEILGVFSAAKDRLSSH 60

Query: 66  EQRPPFTAVQRDVGLEEWLRSSCSQAMELTQMQIKSLSPSSVVVAVPAAVEDSGKLMAMG 125
           E  PP TAVQ +VGLEEWL+S+CSQAMEL QMQ +S SP S +V VPAAV+DSGKLMAMG
Sbjct: 61  EP-PPLTAVQGEVGLEEWLKSTCSQAMELAQMQTRSPSPPSAIVTVPAAVKDSGKLMAMG 120

Query: 126 F---SSSSTKARRRKDDTEKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFPRGY 185
           F   SSSSTKARRRKDD EKRTVRV APRIGNTELPPDDGFTWRKYGQKEILGSRFPRGY
Sbjct: 121 FSSSSSSSTKARRRKDDMEKRTVRVGAPRIGNTELPPDDGFTWRKYGQKEILGSRFPRGY 180

Query: 186 FRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRSDHTCHMSATAPSAPPPPPPGVAGGQQI 245
           FRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYR DHTCHMSATAPSAPPPPP  +A GQ I
Sbjct: 181 FRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRGDHTCHMSATAPSAPPPPP--LATGQPI 240

Query: 246 SQ-FRPPSAGWLSMEVVGSAASGSASGGPATVRYGKEIADQFPVVDLADVMFNSGTGSSN 305
           SQ   P SA WLSM+VVG   SGS SG P +VRYGKE+ DQF VVD+ADVMFNSGT SSN
Sbjct: 241 SQLIHPASAAWLSMDVVG---SGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSN 300

Query: 306 SMESIFAAYVADDHHHKWEKDDKKN 326
           SM+SIFAAYVA+D  HKWEK+DKKN
Sbjct: 301 SMDSIFAAYVAED--HKWEKEDKKN 317

[Close]

BLAST of Lsi04G010110 vs. NCBI nr
Match: gi|449457464|ref|XP_004146468.1| (PREDICTED: WRKY transcription factor 55 [Cucumis sativus])

HSP 1 Score: 492.7 bits (1267), Expect = 5.1e-136
Identity = 256/323 (79.26%), Postives = 279/323 (86.38%), Query Frame = 1


Query: 7   EEVISLILRGCSLARQLEFNVLNFGNNNINVH-QPHFMARSCDEILTVFSAAKDRLSTHE 66
           E +ISLILRGCSLARQLEFNVLN G+NNIN+  Q HFMARSCDEIL VFSAAKDRL +HE
Sbjct: 3   EAIISLILRGCSLARQLEFNVLNLGSNNINISDQSHFMARSCDEILGVFSAAKDRLGSHE 62

Query: 67  QRPPFTAVQRDVGLEEWLRSSCSQAMELTQMQIKSLSPSSVVVAVPAAVEDSGKLMAMGF 126
             PP T VQ +VGLEEWL+S+CSQAMEL+QMQ+ S SP S +V+VPAAV+DSGKLMAMG 
Sbjct: 63  P-PPLTGVQGEVGLEEWLKSTCSQAMELSQMQMISPSPPSAIVSVPAAVKDSGKLMAMGL 122

Query: 127 ----SSSSTKARRRKDDTEKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFPRGY 186
               SSSSTKARRRKDDTEKRTVRV APRIGNTELPPDDGFTWRKYGQKEILGSRFPRGY
Sbjct: 123 SSSSSSSSTKARRRKDDTEKRTVRVGAPRIGNTELPPDDGFTWRKYGQKEILGSRFPRGY 182

Query: 187 FRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRSDHTCHMSATAPSAPPPPPPGVAGGQQI 246
           FRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYR +HTCHMSATAPSAPPPPP  +   Q I
Sbjct: 183 FRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRGEHTCHMSATAPSAPPPPP--LPTDQPI 242

Query: 247 SQFRPPSAGWLSMEVVGSAASGSASGGPATVRYGKEIADQFPVVDLADVMFNSGTGSSNS 306
           S F  P+A WLSM+VVG   SGS SG P+TVRYGK++ DQF VVD+ADVMFNSGT SSNS
Sbjct: 243 SHFH-PAAPWLSMDVVG---SGSTSGAPSTVRYGKDVGDQFAVVDMADVMFNSGTSSSNS 302

Query: 307 MESIFAAYVADDHHHKWEKDDKK 325
           M+SIFAAYV +D  HKWEK+DKK
Sbjct: 303 MDSIFAAYVGED--HKWEKEDKK 316

[Close]

BLAST of Lsi04G010110 vs. NCBI nr
Match: gi|1003003152|gb|AMO00446.1| (WRKY transcription factor 78 [Manihot esculenta])

HSP 1 Score: 298.9 bits (764), Expect = 1.1e-77
Identity = 174/329 (52.89%), Postives = 218/329 (66.26%), Query Frame = 1


Query: 6   MEEVISLILRGCSLARQLEFNVLNFGNNNINVHQPHFMARSCDEILTVFSAAKDRLSTHE 65
           M+E ISLIL+G  LA+ LE  V      N+  HQ   M    DEI+ VF +A++RLS+H+
Sbjct: 1   MDEFISLILQGVKLAKDLEPAV-----QNLATHQNQEMISKLDEIIRVFISARERLSSHQ 60

Query: 66  QRPPFTAVQR----DVGLEE-WLRSSCSQAMELTQMQIKSLSPSSVVVAVPA----AVED 125
                   Q+    D  L+E WLR+   +  + +Q+  + +S SS +    A    A+E 
Sbjct: 61  DVSQMLQQQQQPQIDPSLQEYWLRTKMVELFQ-SQLMAERMSSSSGLENKQAEGGLAMEL 120

Query: 126 SGKLMAMGFSSSSTKARRRKDDTEKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSR 185
           SG+ +    SSS+ + RRRKDD +KRT+RV APR+GNTE+PP+DG+TWRKYGQKEILGSR
Sbjct: 121 SGRDVQAMASSSAQRPRRRKDDADKRTMRVPAPRMGNTEIPPEDGYTWRKYGQKEILGSR 180

Query: 186 FPRGYFRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRSDHTCHMSATAPSAPPPPPPGVA 245
           FPRGY+RCTHQKLY CPAKK VQRLDDDP+TFEVTYR DH CHMSATAPS PPP  P + 
Sbjct: 181 FPRGYYRCTHQKLYQCPAKKQVQRLDDDPYTFEVTYRGDHICHMSATAPSVPPPQLPEIT 240

Query: 246 GGQQISQFRPPSAGWLSMEVVGSAASGSASGGPATVRYGKEIADQFPVVDLADVMFNSGT 305
                S        WL   + GS +S  A+ GP+TVRYGKE   +FPV D+ADVMFNSG+
Sbjct: 241 REMTQSAMAAQPPPWLEFSLGGSGSS-MAAAGPSTVRYGKEA--EFPVADMADVMFNSGS 300

Query: 306 GSSNSMESIFAAYVADDHHHKWEKDDKKN 326
            SSNSMESIF  Y+      KWE ++KKN
Sbjct: 301 SSSNSMESIF-TYM----EGKWEPEEKKN 315

[Close]

BLAST of Lsi04G010110 vs. NCBI nr
Match: gi|590570537|ref|XP_007011366.1| (WRKY DNA-binding protein 55, putative [Theobroma cacao])

HSP 1 Score: 284.6 bits (727), Expect = 2.1e-73
Identity = 183/378 (48.41%), Postives = 228/378 (60.32%), Query Frame = 1


Query: 3   DFSMEEVISLILRGCSLARQLEFNVLNFGNNNINVHQPHFMARSCDEILTVFSAAKDRLS 62
           D +MEE  SL+L GC LA+ LE N+ N  N      QP  +++SCD+I+ VF+AAK+RL+
Sbjct: 15  DQTMEETFSLMLHGCKLAKDLESNLGNLAN------QPEILSKSCDDIVKVFAAAKERLN 74

Query: 63  THEQRPPFTAVQR-------------DVGLEEWLRSSC-SQAMELTQMQI---------- 122
             +    FT + R             D  L+EWL+    +QAM++ Q QI          
Sbjct: 75  ADQDPALFTQLLRQSPSSSQQPQQSTDPSLQEWLKYGVITQAMDMIQQQILAGKAPLETN 134

Query: 123 ----KSLSPSSVVVAVPAAVEDSGKLMAM-------GFSSSSTKARR-RKDDTEKRTVRV 182
               K+L   S    +  +V   G++ AM       G SSSS + RR RKDD EK T+ V
Sbjct: 135 EMGGKNLLEGSASAPLKGSV--GGEIQAMELSDSGRGSSSSSQRPRRSRKDDEEKCTMTV 194

Query: 183 AAPRIGNTELPPDDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDDDPH 242
            AP++GNT+LPP+D FTWRKYGQKEILGSR+PR Y+RCTHQKLY+CPAKK VQRLD+D +
Sbjct: 195 PAPQMGNTDLPPEDNFTWRKYGQKEILGSRYPRAYYRCTHQKLYNCPAKKQVQRLDNDFY 254

Query: 243 TFEVTYRSDHTCHMSATAPSAPPPPPPGVAGGQQI------SQFRPPSAG------WLSM 302
           TFEVTY   HTCHMS+TAPS PPPPP       QI      SQ  P S+       WLSM
Sbjct: 255 TFEVTYIGQHTCHMSSTAPSIPPPPPLETGTQDQIMTQAMVSQPTPASSSSVPLGRWLSM 314

Query: 303 EV--VGSAASGSASGG----PATVRYGKEIADQFPVV-DLADVMFNSGTGSSNSMESIFA 326
           E   + SA+ GS SGG     AT RYG+E+   +PVV D+ADVMFNSG+ SSNSME IF 
Sbjct: 315 EFTSLASASCGSGSGGAGGSTATARYGREV--DYPVVADMADVMFNSGSSSSNSMEFIFP 374

[Close]

BLAST of Lsi04G010110 vs. NCBI nr
Match: gi|802778371|ref|XP_012091129.1| (PREDICTED: WRKY transcription factor 55 [Jatropha curcas])

HSP 1 Score: 283.1 bits (723), Expect = 6.1e-73
Identity = 168/340 (49.41%), Postives = 213/340 (62.65%), Query Frame = 1


Query: 6   MEEVISLILRGCSLARQLEFNVLNFGNNNINVHQPHFMARSCDEILTVFSAAKDRLSTHE 65
           M+E ISLIL G  L+++LE  + N  N          M    DEI+ VF  A++RL+  +
Sbjct: 1   MDEFISLILHGIQLSKELEPTLQNLANKQ------EIMLSKLDEIIRVFVTARERLNAQD 60

Query: 66  Q--------RPPFTAVQRDVGLEE-WLRSSCSQAMELTQMQI----KSLSPSSVVVAVPA 125
                    R      Q D  L E WL+S   + ME+ Q Q+    +S     + +  P+
Sbjct: 61  PSSYSQMLFRESQQPHQVDPSLREYWLKS---KMMEMLQTQLIADQRSSGSGGLEMGSPS 120

Query: 126 ---AVEDSGKLMAMGFSSSSTKARRRKDDTEKRTVRVAAPRIGNTELPPDDGFTWRKYGQ 185
              A+E + K      +SSS + RRRKDD EK+T+RV APR+GNTE+PP+DG+TWRKYGQ
Sbjct: 121 GGLAMEIASKSDVQAVASSSQRPRRRKDDAEKKTIRVPAPRMGNTEIPPEDGYTWRKYGQ 180

Query: 186 KEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRSDHTCHMSATAPSAPP 245
           KEILGSRFPRGY+RCTHQKLY CPAKK VQRLDDDPHTFEVTYR DHTCHMS+TAPS PP
Sbjct: 181 KEILGSRFPRGYYRCTHQKLYQCPAKKQVQRLDDDPHTFEVTYRGDHTCHMSSTAPSVPP 240

Query: 246 PPPPGVAGGQQISQ---FRPPSAGWLSMEVVGSAASGSASG-GPATVRYGKEIADQFPVV 305
                +   Q+++Q    +PP+  WL   + G    GS SG GP+T R+GKE   ++PV 
Sbjct: 241 -----LQITQEMTQNMATQPPA--WLEFTLGGGGGRGSGSGAGPSTARFGKEA--EYPVA 300

Query: 306 DLADVMFNSGTGSSNSMESIFAAYVADDHHHKWEKDDKKN 326
           D+AD MFNSG+ SSNSME IF A        KWE ++KKN
Sbjct: 301 DMADAMFNSGSSSSNSMELIFTAM-----EDKWEPEEKKN 317

The following BLAST results are available for this feature:

BLAST of Lsi04G010110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WRK55_ARATH	1.6e-44	41.10	WRKY transcription factor 55 OS=Arabidopsis thaliana GN=WRKY55 PE=2 SV=1	[more]
WRK53_ARATH	3.0e-19	30.71	Probable WRKY transcription factor 53 OS=Arabidopsis thaliana GN=WRKY53 PE=1 SV=...	[more]
WRK70_ARATH	8.1e-17	39.69	Probable WRKY transcription factor 70 OS=Arabidopsis thaliana GN=WRKY70 PE=2 SV=...	[more]
WRK41_ARATH	1.1e-16	37.82	Probable WRKY transcription factor 41 OS=Arabidopsis thaliana GN=WRKY41 PE=2 SV=...	[more]
WRK30_ARATH	1.1e-16	52.11	Probable WRKY transcription factor 30 OS=Arabidopsis thaliana GN=WRKY30 PE=2 SV=...	[more]

BLAST of Lsi04G010110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A140H8T2_MANES	7.5e-78	52.89	WRKY transcription factor 78 OS=Manihot esculenta PE=2 SV=1	[more]
A0A061FSX1_THECC	1.5e-73	48.41	WRKY DNA-binding protein 55, putative OS=Theobroma cacao GN=TCM_045555 PE=4 SV=1	[more]
S5CH76_JATCU	4.3e-73	49.41	Uncharacterized protein OS=Jatropha curcas GN=WRKY55 PE=4 SV=1	[more]
A0A140H8R0_MANES	8.3e-69	49.07	WRKY transcription factor 56 OS=Manihot esculenta PE=2 SV=1	[more]
F6HC34_VITVI	8.3e-69	42.71	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g03130 PE=4 SV=...	[more]

BLAST of Lsi04G010110 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G40740.1	8.8e-46	41.10	WRKY DNA-binding protein 55	[more]
AT4G23810.1	1.7e-20	30.71	WRKY family transcription factor	[more]
AT3G56400.1	4.6e-18	39.69	WRKY DNA-binding protein 70	[more]
AT4G11070.1	6.0e-18	37.82	WRKY family transcription factor	[more]
AT5G24110.1	6.0e-18	52.11	WRKY DNA-binding protein 30	[more]

BLAST of Lsi04G010110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114237\|ref\|XP_008456967.1\|	2.4e-141	82.15	PREDICTED: WRKY transcription factor 55 [Cucumis melo]	[more]
gi\|449457464\|ref\|XP_004146468.1\|	5.1e-136	79.26	PREDICTED: WRKY transcription factor 55 [Cucumis sativus]	[more]
gi\|1003003152\|gb\|AMO00446.1\|	1.1e-77	52.89	WRKY transcription factor 78 [Manihot esculenta]	[more]
gi\|590570537\|ref\|XP_007011366.1\|	2.1e-73	48.41	WRKY DNA-binding protein 55, putative [Theobroma cacao]	[more]
gi\|802778371\|ref\|XP_012091129.1\|	6.1e-73	49.41	PREDICTED: WRKY transcription factor 55 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR003657	WRKY_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G010110.1	Lsi04G010110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	GENE3D	G3DSA:2.20.25.80		coord: 154..220 score: 6.9
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 159..219 score: 5.0
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 158..220 score: 2.6
IPR003657	WRKY domain	PROFILE	PS50811	WRKY	coord: 159..221 score: 20
IPR003657	WRKY domain	unknown	SSF118290	WRKY DNA-binding domain	coord: 156..220 score: 9.68
None	No IPR available	PANTHER	PTHR31282	FAMILY NOT NAMED	coord: 5..306 score: 1.8
None	No IPR available	PANTHER	PTHR31282:SF1	WRKY TRANSCRIPTION FACTOR 38-RELATED	coord: 5..306 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G010110	Csa5G223050	Cucumber (Chinese Long) v2	culsiB369
Lsi04G010110	CSPI05G11650	Wild cucumber (PI 183967)	cpilsiB373
Lsi04G010110	Cucsa.143840	Cucumber (Gy14) v1	cgylsiB232
Lsi04G010110	CmaCh04G000980	Cucurbita maxima (Rimu)	cmalsiB671
Lsi04G010110	CmoCh04G000970	Cucurbita moschata (Rifu)	cmolsiB663
Lsi04G010110	Cla007306	Watermelon (97103) v1	lsiwmB306
Lsi04G010110	MELO3C020163	Melon (DHL92) v3.5.1	lsimeB282
Lsi04G010110	ClCG07G005220	Watermelon (Charleston Gray)	lsiwcgB297
Lsi04G010110	MELO3C020162.2	Melon (DHL92) v3.6.1	lsimedB300
Lsi04G010110	Cla97C07G133570	Watermelon (97103) v2	lsiwmbB298
Lsi04G010110	Bhi07G000406	Wax gourd	lsiwgoB381
Lsi04G010110	CsGy5G008910	Cucumber (Gy14) v2	cgyblsiB338
Lsi04G010110	Carg24467	Silver-seed gourd	carlsiB828
Lsi04G010110	CsaV3_5G011060	Cucumber (Chinese Long) v3	cuclsiB394

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G010110	Bottle gourd (USVL1VR-Ls)	lsilsiB128
Lsi04G010110	Cucurbita maxima (Rimu)	cmalsiB672
Lsi04G010110	Cucurbita moschata (Rifu)	cmolsiB662
Lsi04G010110	Cucurbita pepo (Zucchini)	cpelsiB149
Lsi04G010110	Cucurbita pepo (Zucchini)	cpelsiB354
Lsi04G010110	Cucurbita pepo (Zucchini)	cpelsiB355
Lsi04G010110	Silver-seed gourd	carlsiB242
Lsi04G010110	Silver-seed gourd	carlsiB605
Lsi04G010110	Watermelon (97103) v2	lsiwmbB270