CmaCh04G000980 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G000980
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionWRKY transcription factor 55
LocationCma_Chr04 : 487467 .. 489639 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTAAATCCGGGCATGGAGGAGGCCCTTTCTTTGATTCTTCGAGGGTGTTCCTTGGCCAGAGATTTTGAATCCAATCCTTTAAATTTCCGCAATAATATTAACTTCCTCGCTCGTTTTTGTGATGAGATTTTGGGTGTTTTCTCCGCCGCCAAGGAGCGCCTCAGTGGCCCTCAAAACCAGTGGCTCAGGACCAGTACCTCCCAACCTATGGACTTGCCGCGGATTCAGATGAGGCCGCCGCCGTTCGAGGATTCCGGGAATCTACCGGCAATGGGTTTTGGTTCTTCTTCTTATTCTTCCACGTCAACCAAGGCTCGAAGACGGTATTGGTTAAATTATGAATTCTTTATTCATCGAAACTAAAAGTCAAAAAGTAAAAGTAAAAGAGATTGTTTTTTTGTGAAATGGGTTTAACCAGAAAAGATGGAATGGCGAAGAGGACGGTGAGAGTGGCGGCGCCGCGCATCGGAAACACAGAGCTGCCACCGGACGACGGTTTCACATGGCGTAAGTATGGACAGAAGGAGATTCTTGGCTCCAGGTTTCCCAGGTTTGTTTTGTTACTAATTTAATTACGTTGCTAACTTCGGCTTAAGATTTTAATTAATTATTGAAATTAAAATCATAACAACACAAATAATTCAAAAAAAAGTGAAATTATTATTCACAAACACATATTTCAATGGAATTCGAATAACTTCATTTATTATTAAAAGTTTTCATTTTAACAAATAATAAACCAAAAAGTAAATAAAACCCTTTTTTTTCCGAGAATTTGTAATCATAAGCTTTTGATTTTAATCTTTTGTTTAATTCTTAACACAAAATTAGCCCATTTATACAAAATCAAGTAAATATATTATTTACTACCAAAATGTACAATATTCGATGTGAAATCCCACAATCGGTTGTAAAGTATAGAAACCTCTCTCTAGATGACACACGTTTAAAAATTGAAGACAATATGTAATGAACCAAAGTGGATAATATGTACTAGCGGTAACCTCAAGCTGTTACAAATGTTATTAGAGTTAGAAACTAGGCGGTGTGCCAACGAAGACGCTGACCCCCAATGAAGTGAAACCTCACCCAATGAAGTGAAACCTCACCCAATGAAGTGGACAATATCTACTAACAACTCTTACCATCCAACTACATTAAAAAAAAAAAAAAAAAATCAATATAAAATAATAATAATTCAAATTAACTAACTAAATAAAAATTACAAGTTGTAAGTTTATATTTATTCTTTGGAAATTTAAAATTTATAAAACGATTTTTTTTTTTAAAACAAAGATTTTTTTTTAAGTAAAACAAAAAAAATTATTTTTTTAATTTGGTAGGGGAAATTGATTTATAAAATAATCGAAGGTTTGACCGATTTAATTGAAAACAAATGTGGGACACCTTTGTTGAATTTCTGACTCATTCTTCGGTCAATAATTCTTCAATATTAATTTTTTGTTTATTATTAAATGTCTTTATCTATTATTAATAAACCCTTTCTATTTTCAAATTTTAATTTTATTTGATTAACCAATCACATTTAACTAACTAATTTCAATATCATATTTTAATTGGTGGTTTAAATATTTAATTTTCACAGTAATTAAATTTATATAAAAAAACAGAATTAATTTTATGATTTTAACAAAAATAAATAAATAAAATGTTGCAGAGGCTACTTCAGATGCACCCACCAGAAGCTCTACCACTGCCCAGCCAAGAAGCACGTGCAGCGCCTCGATCACGATCCCCACACGTTCGAAGTCGCCTACCTTGGTGACCACACGTGCCACATGTCCGCCACCGCCCCCTCCGCTCCACCACCGCCATCGACGCTGCCGGAAGTTGCCGGGCTACACATGACCCAGTACCCTCCCCCCTCCTCCGGATGGCTTTCGATGGAGTACGGGGGTCCGGCCACCATCCGGTCCAGCAAAGACGTCGGCGATCAGTTCCCGGTGTTGGACATGGTGGACGCCATGTTCAACTCCGGCACCGGCAGCAGTAATAGTGTAGACTCCATCTTCGGCGCTAATGTGGGGGAAGAACATCAGCATCACAAGTGGGAGAAAGACAACAAGAAAAATTAGTACAATTATTTTTCAAATTACAATTTTTGGTCTCTCATATTTTGTTTTAAAATATTCTTAATAAGCTCCAT

mRNA sequence

ATGGAGGTAAATCCGGGCATGGAGGAGGCCCTTTCTTTGATTCTTCGAGGGTGTTCCTTGGCCAGAGATTTTGAATCCAATCCTTTAAATTTCCGCAATAATATTAACTTCCTCGCTCGTTTTTGTGATGAGATTTTGGGTGTTTTCTCCGCCGCCAAGGAGCGCCTCAGTGGCCCTCAAAACCAGTGGCTCAGGACCAGTACCTCCCAACCTATGGACTTGCCGCGGATTCAGATGAGGCCGCCGCCGTTCGAGGATTCCGGGAATCTACCGGCAATGGGTTTTGGTTCTTCTTCTTATTCTTCCACGTCAACCAAGGCTCGAAGACGAAAAGATGGAATGGCGAAGAGGACGGTGAGAGTGGCGGCGCCGCGCATCGGAAACACAGAGCTGCCACCGGACGACGGTTTCACATGGCGTAAGTATGGACAGAAGGAGATTCTTGGCTCCAGGTTTCCCAGAGGCTACTTCAGATGCACCCACCAGAAGCTCTACCACTGCCCAGCCAAGAAGCACGTGCAGCGCCTCGATCACGATCCCCACACGTTCGAAGTCGCCTACCTTGGTGACCACACGTGCCACATGTCCGCCACCGCCCCCTCCGCTCCACCACCGCCATCGACGCTGCCGGAAGTTGCCGGGCTACACATGACCCAGTACCCTCCCCCCTCCTCCGGATGGCTTTCGATGGAGTACGGGGGTCCGGCCACCATCCGGTCCAGCAAAGACGTCGGCGATCAGTTCCCGGTGTTGGACATGGTGGACGCCATGTTCAACTCCGGCACCGGCAGCAGTAATAGTGTAGACTCCATCTTCGGCGCTAATGTGGGGGAAGAACATCAGCATCACAAGTGGGAGAAAGACAACAAGAAAAATTAGTACAATTATTTTTCAAATTACAATTTTTGGTCTCTCATATTTTGTTTTAAAATATTCTTAATAAGCTCCAT

Coding sequence (CDS)

ATGGAGGTAAATCCGGGCATGGAGGAGGCCCTTTCTTTGATTCTTCGAGGGTGTTCCTTGGCCAGAGATTTTGAATCCAATCCTTTAAATTTCCGCAATAATATTAACTTCCTCGCTCGTTTTTGTGATGAGATTTTGGGTGTTTTCTCCGCCGCCAAGGAGCGCCTCAGTGGCCCTCAAAACCAGTGGCTCAGGACCAGTACCTCCCAACCTATGGACTTGCCGCGGATTCAGATGAGGCCGCCGCCGTTCGAGGATTCCGGGAATCTACCGGCAATGGGTTTTGGTTCTTCTTCTTATTCTTCCACGTCAACCAAGGCTCGAAGACGAAAAGATGGAATGGCGAAGAGGACGGTGAGAGTGGCGGCGCCGCGCATCGGAAACACAGAGCTGCCACCGGACGACGGTTTCACATGGCGTAAGTATGGACAGAAGGAGATTCTTGGCTCCAGGTTTCCCAGAGGCTACTTCAGATGCACCCACCAGAAGCTCTACCACTGCCCAGCCAAGAAGCACGTGCAGCGCCTCGATCACGATCCCCACACGTTCGAAGTCGCCTACCTTGGTGACCACACGTGCCACATGTCCGCCACCGCCCCCTCCGCTCCACCACCGCCATCGACGCTGCCGGAAGTTGCCGGGCTACACATGACCCAGTACCCTCCCCCCTCCTCCGGATGGCTTTCGATGGAGTACGGGGGTCCGGCCACCATCCGGTCCAGCAAAGACGTCGGCGATCAGTTCCCGGTGTTGGACATGGTGGACGCCATGTTCAACTCCGGCACCGGCAGCAGTAATAGTGTAGACTCCATCTTCGGCGCTAATGTGGGGGAAGAACATCAGCATCACAAGTGGGAGAAAGACAACAAGAAAAATTAG

Protein sequence

MEVNPGMEEALSLILRGCSLARDFESNPLNFRNNINFLARFCDEILGVFSAAKERLSGPQNQWLRTSTSQPMDLPRIQMRPPPFEDSGNLPAMGFGSSSYSSTSTKARRRKDGMAKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDHDPHTFEVAYLGDHTCHMSATAPSAPPPPSTLPEVAGLHMTQYPPPSSGWLSMEYGGPATIRSSKDVGDQFPVLDMVDAMFNSGTGSSNSVDSIFGANVGEEHQHHKWEKDNKKN
Homology
[Close]
BLAST of CmaCh04G000980 vs. Swiss-Prot
Match: WRK55_ARATH (WRKY transcription factor 55 OS=Arabidopsis thaliana GN=WRKY55 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.8e-39
Identity = 121/308 (39.29%), Postives = 149/308 (48.38%), Query Frame = 1 

Query: 7   MEEALSLILRGCSLARDFESNPLNFRNNINFLARFCDEILGVFSAAKERLSG-------- 66
           MEE +S+I  G  L +  ES+ L  +   + L    DEI+  FS A ERL          
Sbjct: 11  MEEVMSMIFHGMKLVKSLESS-LPEKPPESLLTSL-DEIVKTFSDANERLKMLLEIKNSE 70

Query: 67  -------------------------PQNQWLRT--STSQPMDLPRIQMRPPPFEDSG--N 126
                                     Q  WLR   STS        Q +    +  G  N
Sbjct: 71  TALNKTKPVIVSVANQMLMQMEPGLMQEYWLRYGGSTSSQGTEAMFQTQLMAVDGGGERN 130

Query: 127 LPAMGFGSSSYSSTSTKARRRKDGMAKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILG 186
           L A    S +  S++ + RRRKD   ++TV VAA R GNT+LPPDD  TWRKYGQKEILG
Sbjct: 131 LTAAVERSGASGSSTPRQRRRKDEGEEQTVLVAALRTGNTDLPPDDNHTWRKYGQKEILG 190

Query: 187 SRFPRGYFRCTHQKLYHCPAKKHVQRLDHDPHTFEVAYLGDHTCHMSATAPSAPPPPSTL 246
           SRFPR Y+RCTHQKLY+CPAKK VQRL+ DP TF V Y G HTC+ S    ++   PST+
Sbjct: 191 SRFPRAYYRCTHQKLYNCPAKKQVQRLNDDPFTFRVTYRGSHTCYNSTAPTASSATPSTI 250

Query: 247 P--EVAGLHMTQYPPPSSGWLSMEYGGPATIRSSKDVGDQFPVLDMVDAMFNSGTGSSNS 276
           P   V   H            S++YG                V+DM D MF SG G   +
Sbjct: 251 PISSVTTGH------------SVDYG--------------LAVVDMADVMFGSG-GVGTN 289

[Close]
BLAST of CmaCh04G000980 vs. Swiss-Prot
Match: WRK53_ARATH (Probable WRKY transcription factor 53 OS=Arabidopsis thaliana GN=WRKY53 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.6e-18
Identity = 47/93 (50.54%), Postives = 57/93 (61.29%), Query Frame = 1 

Query: 119 VRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDH 178
           VR++  R    E P DD F+WRKYGQK+ILG++FPR Y+RCTH+   +C A K VQR D 
Sbjct: 145 VRISPER--GLEGPQDDVFSWRKYGQKDILGAKFPRSYYRCTHRSTQNCWATKQVQRSDG 204

Query: 179 DPHTFEVAYLGDHTCHMSATAPSAPPPPSTLPE 212
           D   FEV Y G HTC  + T      PP   PE
Sbjct: 205 DATVFEVTYRGTHTCSQAITR----TPPLASPE 231

[Close]
BLAST of CmaCh04G000980 vs. Swiss-Prot
Match: WRK70_ARATH (Probable WRKY transcription factor 70 OS=Arabidopsis thaliana GN=WRKY70 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 8.6e-18
Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 1 

Query: 111 KDGMAKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAK 170
           K G  KR  R     I +T L  +D F+WRKYGQKEIL ++FPR YFRCTH+    C A 
Sbjct: 99  KRGCYKRKKRSETCTIESTIL--EDAFSWRKYGQKEILNAKFPRSYFRCTHKYTQGCKAT 158

Query: 171 KHVQRLDHDPHTFEVAYLGDHTCHMSATAPSA 203
           K VQ+++ +P  F + Y+G+HTC+ +A  P +
Sbjct: 159 KQVQKVELEPKMFSITYIGNHTCNTNAETPKS 188

[Close]
BLAST of CmaCh04G000980 vs. Swiss-Prot
Match: WRK41_ARATH (Probable WRKY transcription factor 41 OS=Arabidopsis thaliana GN=WRKY41 PE=2 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-17
Identity = 51/136 (37.50%), Postives = 70/136 (51.47%), Query Frame = 1 

Query: 75  PRIQMRPPPFEDSGNLPAMGFG------SSSYSSTSTK----ARRRKDGMAKRTVRVAAP 134
           P I++ P P    G +P           S  + +  +K    + +++  + K T +V   
Sbjct: 72  PTIELAPDPLAHPGKVPGSPASITGNPRSEEFFNVRSKEFNLSSKKRKMLPKWTEQVRIS 131

Query: 135 RIGNTELPPDDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDHDPHTFE 194
                E P DD F+WRKYGQK+ILG++FPR Y+RCT +   +C A K VQR D DP  FE
Sbjct: 132 PERGLEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYCWATKQVQRSDGDPTIFE 191

Query: 195 VAYLGDHTCHMSATAP 201
           V Y G HTC      P
Sbjct: 192 VTYRGTHTCSQGIPLP 207

[Close]
BLAST of CmaCh04G000980 vs. Swiss-Prot
Match: WRK46_ARATH (Probable WRKY transcription factor 46 OS=Arabidopsis thaliana GN=WRKY46 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.2e-16
Identity = 40/67 (59.70%), Postives = 48/67 (71.64%), Query Frame = 1 

Query: 134 DDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDHDPHTFEVAYLGDHTC 193
           DDG  WRKYGQKEI GS+ PR Y+RCTH+    C A K VQ+ D DP  FEV YLG+HTC
Sbjct: 104 DDGHCWRKYGQKEIHGSKNPRAYYRCTHRFTQDCLAVKQVQKSDTDPSLFEVKYLGNHTC 163

Query: 194 HMSATAP 201
           + + T+P
Sbjct: 164 N-NITSP 169

[Close]
BLAST of CmaCh04G000980 vs. TrEMBL
Match: A0A140H8T2_MANES (WRKY transcription factor 78 OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 7.2e-64
Identity = 155/329 (47.11%), Postives = 189/329 (57.45%), Query Frame = 1 

Query: 7   MEEALSLILRGCSLARDFESNPLNFRNNINF-LARFCDEILGVFSAAKERLSGPQN---- 66
           M+E +SLIL+G  LA+D E    N   + N  +    DEI+ VF +A+ERLS  Q+    
Sbjct: 1   MDEFISLILQGVKLAKDLEPAVQNLATHQNQEMISKLDEIIRVFISARERLSSHQDVSQM 60

Query: 67  ---------------QWLRTSTSQPMDLPRIQMRPPPFEDSGNLP--------AMGFGSS 126
                           WLRT     ++L + Q+       S  L         AM     
Sbjct: 61  LQQQQQPQIDPSLQEYWLRTKM---VELFQSQLMAERMSSSSGLENKQAEGGLAMELSGR 120

Query: 127 SY----SSTSTKARRRKDGMAKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFPR 186
                 SS++ + RRRKD   KRT+RV APR+GNTE+PP+DG+TWRKYGQKEILGSRFPR
Sbjct: 121 DVQAMASSSAQRPRRRKDDADKRTMRVPAPRMGNTEIPPEDGYTWRKYGQKEILGSRFPR 180

Query: 187 GYFRCTHQKLYHCPAKKHVQRLDHDPHTFEVAYLGDHTCHMSATAPSAPPP--PSTLPEV 246
           GY+RCTHQKLY CPAKK VQRLD DP+TFEV Y GDH CHMSATAPS PPP  P    E+
Sbjct: 181 GYYRCTHQKLYQCPAKKQVQRLDDDPYTFEVTYRGDHICHMSATAPSVPPPQLPEITREM 240

Query: 247 AGLHMTQYPPPSSGWL---------SMEYGGPATIRSSKDVGDQFPVLDMVDAMFNSGTG 293
               M   PPP   WL         SM   GP+T+R  K+   +FPV DM D MFNSG+ 
Sbjct: 241 TQSAMAAQPPP---WLEFSLGGSGSSMAAAGPSTVRYGKEA--EFPVADMADVMFNSGSS 300

[Close]
BLAST of CmaCh04G000980 vs. TrEMBL
Match: S5CH76_JATCU (Uncharacterized protein OS=Jatropha curcas GN=WRKY55 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 4.4e-61
Identity = 150/330 (45.45%), Postives = 186/330 (56.36%), Query Frame = 1 

Query: 7   MEEALSLILRGCSLARDFESNPLNFRNNINFLARFCDEILGVFSAAKERLSGPQ----NQ 66
           M+E +SLIL G  L+++ E    N  N    +    DEI+ VF  A+ERL+       +Q
Sbjct: 1   MDEFISLILHGIQLSKELEPTLQNLANKQEIMLSKLDEIIRVFVTARERLNAQDPSSYSQ 60

Query: 67  WLRTSTSQP----------------MDLPRIQM-RPPPFEDSGNLP--------AMGFGS 126
            L   + QP                M++ + Q+        SG L         AM   S
Sbjct: 61  MLFRESQQPHQVDPSLREYWLKSKMMEMLQTQLIADQRSSGSGGLEMGSPSGGLAMEIAS 120

Query: 127 SS----YSSTSTKARRRKDGMAKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFP 186
            S     +S+S + RRRKD   K+T+RV APR+GNTE+PP+DG+TWRKYGQKEILGSRFP
Sbjct: 121 KSDVQAVASSSQRPRRRKDDAEKKTIRVPAPRMGNTEIPPEDGYTWRKYGQKEILGSRFP 180

Query: 187 RGYFRCTHQKLYHCPAKKHVQRLDHDPHTFEVAYLGDHTCHMSATAPSAPPPPSTLPEVA 246
           RGY+RCTHQKLY CPAKK VQRLD DPHTFEV Y GDHTCHMS+TAPS PP   T  +  
Sbjct: 181 RGYYRCTHQKLYQCPAKKQVQRLDDDPHTFEVTYRGDHTCHMSSTAPSVPPLQIT--QEM 240

Query: 247 GLHMTQYPPPSSGWLSMEYG-----------GPATIRSSKDVGDQFPVLDMVDAMFNSGT 293
             +M   PP    WL    G           GP+T R  K+   ++PV DM DAMFNSG+
Sbjct: 241 TQNMATQPP---AWLEFTLGGGGGRGSGSGAGPSTARFGKEA--EYPVADMADAMFNSGS 300

[Close]
BLAST of CmaCh04G000980 vs. TrEMBL
Match: A0A067FN25_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018407mg PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 3.7e-60
Identity = 148/357 (41.46%), Postives = 194/357 (54.34%), Query Frame = 1 

Query: 7   MEEALSLILRGCSLARDFESNPLNFRNNINFLARFCDEILGVFSAAKERLSGPQN----- 66
           MEE  SLIL GC LA+D E+N  N  N    ++R CDEI+  F AAKERL+   +     
Sbjct: 1   MEEIFSLILNGCKLAKDLEANLPNIANQPETISRSCDEIIKSFCAAKERLNAAHHHQAPA 60

Query: 67  ----------------------------QWLRTSTSQPMDLPRIQ------------MRP 126
                                       +WLR+S +Q M L + Q            M  
Sbjct: 61  ALFYPPAAAAETLFHEQQQQQIIDASLQEWLRSSVTQTMSLIQTQHFVGRTPFDIGEMGA 120

Query: 127 PPFEDSG--------------NLPAMGFGSSSYSSTSTKARRRKDGMAKRTVRVAAPRIG 186
              E +               N+  M    SS +S+S++ R R+ G A RT  V AP+IG
Sbjct: 121 NEMEGTSTTRLRSFGGGHHHHNVQPMDVSDSSRASSSSQPRHRRSGNA-RTTTVPAPQIG 180

Query: 187 NTELPPDDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDHDPHTFEVAY 246
           NTE+PP+DG+TWRKYGQKEIL S++PR Y+RCTHQKLY CPAKK VQRLD DP TFEVAY
Sbjct: 181 NTEIPPEDGYTWRKYGQKEILNSKYPRSYYRCTHQKLYKCPAKKQVQRLDDDPSTFEVAY 240

Query: 247 LGDHTCHMSATAPSAPPPPSTLPEVAGL----HMTQYPPPSSG----WLSMEY------- 289
            GDHTCHMSATAPS  P  S+     G+     +T   P S+     WL+M+        
Sbjct: 241 YGDHTCHMSATAPSMVPASSSAEITQGMTTQQRVTVQQPSSTSNIGRWLTMDVAAGGSST 300

[Close]
BLAST of CmaCh04G000980 vs. TrEMBL
Match: B9S4B3_RICCO (WRKY transcription factor, putative OS=Ricinus communis GN=RCOM_0688810 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 8.3e-60
Identity = 140/328 (42.68%), Postives = 183/328 (55.79%), Query Frame = 1 

Query: 7   MEEALSLILRGCSLARDFESNPLNFRNNINFLARFCDEILGVFSAAKERLSGPQNQ---- 66
           M+E +SLIL G  LA+D E +  N     + L++  DEI+ VF  A++ L+   +     
Sbjct: 1   MDEFISLILHGVKLAKDLEPSLQNLATQQDMLSKL-DEIIRVFITARKMLNAQDSSSHHQ 60

Query: 67  -------------------WLRTSTSQPM---DLPRIQMRPPPFE--DSGNLPAMGFGSS 126
                              WLRT +   +     P ++ +  P    D   +P    GS+
Sbjct: 61  MLFRELQQQPNQVDQTIQDWLRTKSIMELFQTQAPLLEKKSSPGGGIDIDTVPTELGGST 120

Query: 127 SY----SSTSTKARRRKDGMAKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFPR 186
                 SS+  + RRRKD   KRT+RV APR+GNTE+PP+DG+TWRKYGQKEIL S +PR
Sbjct: 121 GVQAMASSSLQRPRRRKDDGEKRTMRVPAPRMGNTEIPPEDGYTWRKYGQKEILASNYPR 180

Query: 187 GYFRCTHQKLYHCPAKKHVQRLDHDPHTFEVAYLGDHTCHMSATAPSAPPPPSTLPEVAG 246
           GY+RCTHQKLYHCPAKK VQRLD DP+TFEV Y GDHTCHMS+TAPS PPPP    E+  
Sbjct: 181 GYYRCTHQKLYHCPAKKQVQRLDDDPYTFEVTYRGDHTCHMSSTAPSIPPPPEFSQEMMQ 240

Query: 247 LHMTQYPPPSSGWLSMEYGGPATIRSSKDVG----------DQFPVLDMVDAMFNSGTGS 293
                +PPP   WL    G   +  SS   G           +FPV D+ D MFNSG+ S
Sbjct: 241 TMAAHHPPP---WLEFSLGAGGSGGSSSSTGAGPSTTTTTVHEFPVADLADVMFNSGSSS 300

[Close]
BLAST of CmaCh04G000980 vs. TrEMBL
Match: A0A140H8R0_MANES (WRKY transcription factor 56 OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.8e-57
Identity = 140/314 (44.59%), Postives = 173/314 (55.10%), Query Frame = 1 

Query: 7   MEEALSLILRGCSLARDFESNPLNFR-NNINFLARFCDEILGVFSAAKERLSGPQN---- 66
           M E +SLIL+G  LA+D E    N   +N   +    DEI+ VF +A+ERL+  Q+    
Sbjct: 1   MNEFISLILKGMKLAKDLEPTLQNLATHNYQHMLSNLDEIIRVFISARERLNAHQDLPQM 60

Query: 67  -----------------QWLRTSTSQPMDLPRIQMRPPPFEDSGNLP------------- 126
                             WLRT     M+L   Q+       S  +              
Sbjct: 61  LFRELQQQPQIDPRLQEYWLRTKM---MELQHSQLEAERIGISSGMENKQAAGGTQMGSA 120

Query: 127 --AMGFGSSSY----SSTSTKARRRKDGMAKRTVRVAAPRIGNTELPPDDGFTWRKYGQK 186
             AM  GS       SS++ + RRRKD    RT+R AAPR+GNTE+PP+DG+TWRKYGQK
Sbjct: 121 NLAMELGSRDVQAMASSSTQRQRRRKDDEEYRTIRAAAPRMGNTEIPPEDGYTWRKYGQK 180

Query: 187 EILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDHDPHTFEVAYLGDHTCHMSATAPSAPPP 246
           EILGSRFPR Y+RCTH KLY CPAKK VQRLD DP+TFEV Y GDHTCHMS TAPS PPP
Sbjct: 181 EILGSRFPRSYYRCTHLKLYQCPAKKQVQRLDDDPYTFEVTYRGDHTCHMSDTAPSVPPP 240

Query: 247 PSTLPEVAGLHMTQYPPP-------SSGWLSMEYGGPATIRSSKDVGDQFPVLDMVDAMF 273
              + +     M   PPP         G       GP+T+R  K+V  ++ V DM D MF
Sbjct: 241 --VITQEVTQSMAAQPPPRLQFRLGGGGSGGSSGSGPSTVRYGKEV--EYLVADMADVMF 300

[Close]
BLAST of CmaCh04G000980 vs. TAIR10
Match: AT2G40740.1 (AT2G40740.1 WRKY DNA-binding protein 55)

HSP 1 Score: 164.5 bits (415), Expect = 1.0e-40
Identity = 121/308 (39.29%), Postives = 149/308 (48.38%), Query Frame = 1 

Query: 7   MEEALSLILRGCSLARDFESNPLNFRNNINFLARFCDEILGVFSAAKERLSG-------- 66
           MEE +S+I  G  L +  ES+ L  +   + L    DEI+  FS A ERL          
Sbjct: 11  MEEVMSMIFHGMKLVKSLESS-LPEKPPESLLTSL-DEIVKTFSDANERLKMLLEIKNSE 70

Query: 67  -------------------------PQNQWLRT--STSQPMDLPRIQMRPPPFEDSG--N 126
                                     Q  WLR   STS        Q +    +  G  N
Sbjct: 71  TALNKTKPVIVSVANQMLMQMEPGLMQEYWLRYGGSTSSQGTEAMFQTQLMAVDGGGERN 130

Query: 127 LPAMGFGSSSYSSTSTKARRRKDGMAKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILG 186
           L A    S +  S++ + RRRKD   ++TV VAA R GNT+LPPDD  TWRKYGQKEILG
Sbjct: 131 LTAAVERSGASGSSTPRQRRRKDEGEEQTVLVAALRTGNTDLPPDDNHTWRKYGQKEILG 190

Query: 187 SRFPRGYFRCTHQKLYHCPAKKHVQRLDHDPHTFEVAYLGDHTCHMSATAPSAPPPPSTL 246
           SRFPR Y+RCTHQKLY+CPAKK VQRL+ DP TF V Y G HTC+ S    ++   PST+
Sbjct: 191 SRFPRAYYRCTHQKLYNCPAKKQVQRLNDDPFTFRVTYRGSHTCYNSTAPTASSATPSTI 250

Query: 247 P--EVAGLHMTQYPPPSSGWLSMEYGGPATIRSSKDVGDQFPVLDMVDAMFNSGTGSSNS 276
           P   V   H            S++YG                V+DM D MF SG G   +
Sbjct: 251 PISSVTTGH------------SVDYG--------------LAVVDMADVMFGSG-GVGTN 289

[Close]
BLAST of CmaCh04G000980 vs. TAIR10
Match: AT4G23810.1 (AT4G23810.1 WRKY family transcription factor)

HSP 1 Score: 92.8 bits (229), Expect = 3.7e-19
Identity = 47/93 (50.54%), Postives = 57/93 (61.29%), Query Frame = 1 

Query: 119 VRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDH 178
           VR++  R    E P DD F+WRKYGQK+ILG++FPR Y+RCTH+   +C A K VQR D 
Sbjct: 145 VRISPER--GLEGPQDDVFSWRKYGQKDILGAKFPRSYYRCTHRSTQNCWATKQVQRSDG 204

Query: 179 DPHTFEVAYLGDHTCHMSATAPSAPPPPSTLPE 212
           D   FEV Y G HTC  + T      PP   PE
Sbjct: 205 DATVFEVTYRGTHTCSQAITR----TPPLASPE 231

[Close]
BLAST of CmaCh04G000980 vs. TAIR10
Match: AT3G56400.1 (AT3G56400.1 WRKY DNA-binding protein 70)

HSP 1 Score: 92.4 bits (228), Expect = 4.8e-19
Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 1 

Query: 111 KDGMAKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAK 170
           K G  KR  R     I +T L  +D F+WRKYGQKEIL ++FPR YFRCTH+    C A 
Sbjct: 99  KRGCYKRKKRSETCTIESTIL--EDAFSWRKYGQKEILNAKFPRSYFRCTHKYTQGCKAT 158

Query: 171 KHVQRLDHDPHTFEVAYLGDHTCHMSATAPSA 203
           K VQ+++ +P  F + Y+G+HTC+ +A  P +
Sbjct: 159 KQVQKVELEPKMFSITYIGNHTCNTNAETPKS 188

[Close]
BLAST of CmaCh04G000980 vs. TAIR10
Match: AT4G11070.1 (AT4G11070.1 WRKY family transcription factor)

HSP 1 Score: 91.7 bits (226), Expect = 8.3e-19
Identity = 51/136 (37.50%), Postives = 70/136 (51.47%), Query Frame = 1 

Query: 75  PRIQMRPPPFEDSGNLPAMGFG------SSSYSSTSTK----ARRRKDGMAKRTVRVAAP 134
           P I++ P P    G +P           S  + +  +K    + +++  + K T +V   
Sbjct: 72  PTIELAPDPLAHPGKVPGSPASITGNPRSEEFFNVRSKEFNLSSKKRKMLPKWTEQVRIS 131

Query: 135 RIGNTELPPDDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDHDPHTFE 194
                E P DD F+WRKYGQK+ILG++FPR Y+RCT +   +C A K VQR D DP  FE
Sbjct: 132 PERGLEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYCWATKQVQRSDGDPTIFE 191

Query: 195 VAYLGDHTCHMSATAP 201
           V Y G HTC      P
Sbjct: 192 VTYRGTHTCSQGIPLP 207

[Close]
BLAST of CmaCh04G000980 vs. TAIR10
Match: AT2G46400.1 (AT2G46400.1 WRKY DNA-binding protein 46)

HSP 1 Score: 86.3 bits (212), Expect = 3.5e-17
Identity = 40/67 (59.70%), Postives = 48/67 (71.64%), Query Frame = 1 

Query: 134 DDGFTWRKYGQKEILGSRFPRGYFRCTHQKLYHCPAKKHVQRLDHDPHTFEVAYLGDHTC 193
           DDG  WRKYGQKEI GS+ PR Y+RCTH+    C A K VQ+ D DP  FEV YLG+HTC
Sbjct: 104 DDGHCWRKYGQKEIHGSKNPRAYYRCTHRFTQDCLAVKQVQKSDTDPSLFEVKYLGNHTC 163

Query: 194 HMSATAP 201
           + + T+P
Sbjct: 164 N-NITSP 169

[Close]
BLAST of CmaCh04G000980 vs. NCBI nr
Match: gi|659114237|ref|XP_008456967.1| (PREDICTED: WRKY transcription factor 55 [Cucumis melo])

HSP 1 Score: 370.5 bits (950), Expect = 2.6e-99
Identity = 206/325 (63.38%), Postives = 231/325 (71.08%), Query Frame = 1 

Query: 7   MEEALSLILRGCSLARDFESNPLNF-RNNIN------FLARFCDEILGVFSAAKERLSGP 66
           MEEA+SLILRGCSLAR  E N LN   NNIN      F+AR CDEILGVFSAAK+RLS  
Sbjct: 1   MEEAISLILRGCSLARQLEFNVLNLGNNNINMSDQSHFMARSCDEILGVFSAAKDRLSSH 60

Query: 67  Q-------------NQWLRTSTSQPMDLPRIQMRPPP-----------FEDSGNLPAMGF 126
           +              +WL+++ SQ M+L ++Q R P             +DSG L AMGF
Sbjct: 61  EPPPLTAVQGEVGLEEWLKSTCSQAMELAQMQTRSPSPPSAIVTVPAAVKDSGKLMAMGF 120

Query: 127 GSSSYSSTSTKARRRKDGMAKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFPRG 186
            SS  SS+STKARRRKD M KRTVRV APRIGNTELPPDDGFTWRKYGQKEILGSRFPRG
Sbjct: 121 SSS--SSSSTKARRRKDDMEKRTVRVGAPRIGNTELPPDDGFTWRKYGQKEILGSRFPRG 180

Query: 187 YFRCTHQKLYHCPAKKHVQRLDHDPHTFEVAYLGDHTCHMSATAPSAPPPPSTLPEVAGL 246
           YFRCTHQKLYHCPAKKHVQRLD DPHTFEV Y GDHTCHMSATAPSAPPPP   P   G 
Sbjct: 181 YFRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRGDHTCHMSATAPSAPPPP---PLATGQ 240

Query: 247 HMTQ-YPPPSSGWLSMEY-------GGPATIRSSKDVGDQFPVLDMVDAMFNSGTGSSNS 293
            ++Q   P S+ WLSM+        G P ++R  K+VGDQF V+DM D MFNSGT SSNS
Sbjct: 241 PISQLIHPASAAWLSMDVVGSGSKSGAPCSVRYGKEVGDQFAVVDMADVMFNSGTSSSNS 300

[Close]
BLAST of CmaCh04G000980 vs. NCBI nr
Match: gi|449457464|ref|XP_004146468.1| (PREDICTED: WRKY transcription factor 55 [Cucumis sativus])

HSP 1 Score: 359.8 bits (922), Expect = 4.6e-96
Identity = 202/324 (62.35%), Postives = 227/324 (70.06%), Query Frame = 1 

Query: 7   MEEAL-SLILRGCSLARDFESNPLNF-RNNIN------FLARFCDEILGVFSAAKERLSG 66
           MEEA+ SLILRGCSLAR  E N LN   NNIN      F+AR CDEILGVFSAAK+RL  
Sbjct: 1   MEEAIISLILRGCSLARQLEFNVLNLGSNNINISDQSHFMARSCDEILGVFSAAKDRLGS 60

Query: 67  PQ-------------NQWLRTSTSQPMDLPRIQMRPPP-----------FEDSGNLPAMG 126
            +              +WL+++ SQ M+L ++QM  P             +DSG L AMG
Sbjct: 61  HEPPPLTGVQGEVGLEEWLKSTCSQAMELSQMQMISPSPPSAIVSVPAAVKDSGKLMAMG 120

Query: 127 FGSSSYSSTSTKARRRKDGMAKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFPR 186
             SSS SS+STKARRRKD   KRTVRV APRIGNTELPPDDGFTWRKYGQKEILGSRFPR
Sbjct: 121 LSSSS-SSSSTKARRRKDDTEKRTVRVGAPRIGNTELPPDDGFTWRKYGQKEILGSRFPR 180

Query: 187 GYFRCTHQKLYHCPAKKHVQRLDHDPHTFEVAYLGDHTCHMSATAPSAPPPPSTLPEVAG 246
           GYFRCTHQKLYHCPAKKHVQRLD DPHTFEV Y G+HTCHMSATAPSAPPPP    +   
Sbjct: 181 GYFRCTHQKLYHCPAKKHVQRLDDDPHTFEVTYRGEHTCHMSATAPSAPPPPPLPTDQPI 240

Query: 247 LHMTQYPPPSSGWLSMEY-------GGPATIRSSKDVGDQFPVLDMVDAMFNSGTGSSNS 292
            H      P++ WLSM+        G P+T+R  KDVGDQF V+DM D MFNSGT SSNS
Sbjct: 241 SHFH----PAAPWLSMDVVGSGSTSGAPSTVRYGKDVGDQFAVVDMADVMFNSGTSSSNS 300

[Close]
BLAST of CmaCh04G000980 vs. NCBI nr
Match: gi|1003003152|gb|AMO00446.1| (WRKY transcription factor 78 [Manihot esculenta])

HSP 1 Score: 252.3 bits (643), Expect = 1.0e-63
Identity = 155/329 (47.11%), Postives = 189/329 (57.45%), Query Frame = 1 

Query: 7   MEEALSLILRGCSLARDFESNPLNFRNNINF-LARFCDEILGVFSAAKERLSGPQN---- 66
           M+E +SLIL+G  LA+D E    N   + N  +    DEI+ VF +A+ERLS  Q+    
Sbjct: 1   MDEFISLILQGVKLAKDLEPAVQNLATHQNQEMISKLDEIIRVFISARERLSSHQDVSQM 60

Query: 67  ---------------QWLRTSTSQPMDLPRIQMRPPPFEDSGNLP--------AMGFGSS 126
                           WLRT     ++L + Q+       S  L         AM     
Sbjct: 61  LQQQQQPQIDPSLQEYWLRTKM---VELFQSQLMAERMSSSSGLENKQAEGGLAMELSGR 120

Query: 127 SY----SSTSTKARRRKDGMAKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFPR 186
                 SS++ + RRRKD   KRT+RV APR+GNTE+PP+DG+TWRKYGQKEILGSRFPR
Sbjct: 121 DVQAMASSSAQRPRRRKDDADKRTMRVPAPRMGNTEIPPEDGYTWRKYGQKEILGSRFPR 180

Query: 187 GYFRCTHQKLYHCPAKKHVQRLDHDPHTFEVAYLGDHTCHMSATAPSAPPP--PSTLPEV 246
           GY+RCTHQKLY CPAKK VQRLD DP+TFEV Y GDH CHMSATAPS PPP  P    E+
Sbjct: 181 GYYRCTHQKLYQCPAKKQVQRLDDDPYTFEVTYRGDHICHMSATAPSVPPPQLPEITREM 240

Query: 247 AGLHMTQYPPPSSGWL---------SMEYGGPATIRSSKDVGDQFPVLDMVDAMFNSGTG 293
               M   PPP   WL         SM   GP+T+R  K+   +FPV DM D MFNSG+ 
Sbjct: 241 TQSAMAAQPPP---WLEFSLGGSGSSMAAAGPSTVRYGKEA--EFPVADMADVMFNSGSS 300

[Close]
BLAST of CmaCh04G000980 vs. NCBI nr
Match: gi|802778371|ref|XP_012091129.1| (PREDICTED: WRKY transcription factor 55 [Jatropha curcas])

HSP 1 Score: 243.0 bits (619), Expect = 6.3e-61
Identity = 150/330 (45.45%), Postives = 186/330 (56.36%), Query Frame = 1 

Query: 7   MEEALSLILRGCSLARDFESNPLNFRNNINFLARFCDEILGVFSAAKERLSGPQ----NQ 66
           M+E +SLIL G  L+++ E    N  N    +    DEI+ VF  A+ERL+       +Q
Sbjct: 1   MDEFISLILHGIQLSKELEPTLQNLANKQEIMLSKLDEIIRVFVTARERLNAQDPSSYSQ 60

Query: 67  WLRTSTSQP----------------MDLPRIQM-RPPPFEDSGNLP--------AMGFGS 126
            L   + QP                M++ + Q+        SG L         AM   S
Sbjct: 61  MLFRESQQPHQVDPSLREYWLKSKMMEMLQTQLIADQRSSGSGGLEMGSPSGGLAMEIAS 120

Query: 127 SS----YSSTSTKARRRKDGMAKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFP 186
            S     +S+S + RRRKD   K+T+RV APR+GNTE+PP+DG+TWRKYGQKEILGSRFP
Sbjct: 121 KSDVQAVASSSQRPRRRKDDAEKKTIRVPAPRMGNTEIPPEDGYTWRKYGQKEILGSRFP 180

Query: 187 RGYFRCTHQKLYHCPAKKHVQRLDHDPHTFEVAYLGDHTCHMSATAPSAPPPPSTLPEVA 246
           RGY+RCTHQKLY CPAKK VQRLD DPHTFEV Y GDHTCHMS+TAPS PP   T  +  
Sbjct: 181 RGYYRCTHQKLYQCPAKKQVQRLDDDPHTFEVTYRGDHTCHMSSTAPSVPPLQIT--QEM 240

Query: 247 GLHMTQYPPPSSGWLSMEYG-----------GPATIRSSKDVGDQFPVLDMVDAMFNSGT 293
             +M   PP    WL    G           GP+T R  K+   ++PV DM DAMFNSG+
Sbjct: 241 TQNMATQPP---AWLEFTLGGGGGRGSGSGAGPSTARFGKEA--EYPVADMADAMFNSGS 300

[Close]
BLAST of CmaCh04G000980 vs. NCBI nr
Match: gi|645256749|ref|XP_008234092.1| (PREDICTED: WRKY transcription factor 55 [Prunus mume])

HSP 1 Score: 241.9 bits (616), Expect = 1.4e-60
Identity = 151/350 (43.14%), Postives = 191/350 (54.57%), Query Frame = 1 

Query: 8   EEALSLILRGCSLARDFESNPLNFRNNINFLARFCDEILGVFSAAKERLSGPQ------- 67
           E  +SLIL+ C LARD ESN  N  N  N L+   DEI   F  A+ER+ G         
Sbjct: 3   ETTISLILQACELARDLESNLHNLANQPNLLSNSLDEITKKFVTARERVYGQDPSTSSSL 62

Query: 68  -----------------NQWLRTSTSQPMDLPRIQMRPPPFEDSGN-----LPAMGFGSS 127
                             +WLR+S +  +   + + +     D  +     L AM   S+
Sbjct: 63  HNMLTLVHQQQIGTSHVQEWLRSSYATQLVADQKEAKIGGCIDDDDAEVKGLQAMDIVSA 122

Query: 128 S----YSSTSTKARRRKDGMAKRTVRVAAPRIGNTELPPDDGFTWRKYGQKEILGSRFPR 187
           S     SS+S +ARRRKD      + V APRIGNTE+PP+DGFTWRKYGQKEI+GSRFPR
Sbjct: 123 SDTNIASSSSQRARRRKDQGLISKITVPAPRIGNTEIPPEDGFTWRKYGQKEIMGSRFPR 182

Query: 188 GYFRCTHQKLYHCPAKKHVQRLDHDPHTFEVAYLGDHTCHMSATAPSAPPPPS------- 247
            Y+RCTHQKLY+CPAKK VQRL++DP TFEV Y G+HTCHMSATAPS PPP +       
Sbjct: 183 SYYRCTHQKLYNCPAKKQVQRLNNDPLTFEVMYRGEHTCHMSATAPSIPPPSAEHHNATQ 242

Query: 248 -TLPEVAGLHMTQYPPPSSGWLSMEY------------------------GGPATIRSSK 293
            ++ +      T  PP +S WLSM++                        G   T R  K
Sbjct: 243 ESMAQTLATTTTADPPTASLWLSMDFNPIRGGGGSSSRIIGGDHGGGDGVGTSTTTRYGK 302

The following BLAST results are available for this feature:
BLAST of CmaCh04G000980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WRK55_ARATH1.8e-3939.29WRKY transcription factor 55 OS=Arabidopsis thaliana GN=WRKY55 PE=2 SV=1[more]
WRK53_ARATH6.6e-1850.54Probable WRKY transcription factor 53 OS=Arabidopsis thaliana GN=WRKY53 PE=1 SV=... [more]
WRK70_ARATH8.6e-1846.74Probable WRKY transcription factor 70 OS=Arabidopsis thaliana GN=WRKY70 PE=2 SV=... [more]
WRK41_ARATH1.5e-1737.50Probable WRKY transcription factor 41 OS=Arabidopsis thaliana GN=WRKY41 PE=2 SV=... [more]
WRK46_ARATH6.2e-1659.70Probable WRKY transcription factor 46 OS=Arabidopsis thaliana GN=WRKY46 PE=2 SV=... [more]
BLAST of CmaCh04G000980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A140H8T2_MANES7.2e-6447.11WRKY transcription factor 78 OS=Manihot esculenta PE=2 SV=1[more]
S5CH76_JATCU4.4e-6145.45Uncharacterized protein OS=Jatropha curcas GN=WRKY55 PE=4 SV=1[more]
A0A067FN25_CITSI3.7e-6041.46Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018407mg PE=4 SV=1[more]
B9S4B3_RICCO8.3e-6042.68WRKY transcription factor, putative OS=Ricinus communis GN=RCOM_0688810 PE=4 SV=... [more]
A0A140H8R0_MANES3.8e-5744.59WRKY transcription factor 56 OS=Manihot esculenta PE=2 SV=1[more]
BLAST of CmaCh04G000980 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G40740.11.0e-4039.29 WRKY DNA-binding protein 55[more]
AT4G23810.13.7e-1950.54 WRKY family transcription factor[more]
AT3G56400.14.8e-1946.74 WRKY DNA-binding protein 70[more]
AT4G11070.18.3e-1937.50 WRKY family transcription factor[more]
AT2G46400.13.5e-1759.70 WRKY DNA-binding protein 46[more]
BLAST of CmaCh04G000980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114237|ref|XP_008456967.1|2.6e-9963.38PREDICTED: WRKY transcription factor 55 [Cucumis melo][more]
gi|449457464|ref|XP_004146468.1|4.6e-9662.35PREDICTED: WRKY transcription factor 55 [Cucumis sativus][more]
gi|1003003152|gb|AMO00446.1|1.0e-6347.11WRKY transcription factor 78 [Manihot esculenta][more]
gi|802778371|ref|XP_012091129.1|6.3e-6145.45PREDICTED: WRKY transcription factor 55 [Jatropha curcas][more]
gi|645256749|ref|XP_008234092.1|1.4e-6043.14PREDICTED: WRKY transcription factor 55 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003657WRKY_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G000980.1CmaCh04G000980.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003657WRKY domainGENE3DG3DSA:2.20.25.80coord: 129..195
score: 2.6
IPR003657WRKY domainPFAMPF03106WRKYcoord: 134..194
score: 1.2
IPR003657WRKY domainSMARTSM00774WRKY_clscoord: 133..195
score: 5.7
IPR003657WRKY domainPROFILEPS50811WRKYcoord: 134..196
score: 20
IPR003657WRKY domainunknownSSF118290WRKY DNA-binding domaincoord: 131..195
score: 8.76
NoneNo IPR availablePANTHERPTHR31282FAMILY NOT NAMEDcoord: 7..272
score: 8.9
NoneNo IPR availablePANTHERPTHR31282:SF1WRKY TRANSCRIPTION FACTOR 38-RELATEDcoord: 7..272
score: 8.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G000980Cucsa.143840Cucumber (Gy14) v1cgycmaB0401
CmaCh04G000980Cla007306Watermelon (97103) v1cmawmB691
CmaCh04G000980MELO3C020163Melon (DHL92) v3.5.1cmameB643
CmaCh04G000980ClCG07G005220Watermelon (Charleston Gray)cmawcgB674
CmaCh04G000980CSPI05G11650Wild cucumber (PI 183967)cmacpiB757
CmaCh04G000980CmoCh04G000970Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G000980Lsi04G010110Bottle gourd (USVL1VR-Ls)cmalsiB671
CmaCh04G000980Cp4.1LG01g05890Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G000980MELO3C020162.2Melon (DHL92) v3.6.1cmamedB743
CmaCh04G000980CsaV3_5G011060Cucumber (Chinese Long) v3cmacucB0883
CmaCh04G000980Cla97C07G133570Watermelon (97103) v2cmawmbB781
CmaCh04G000980Bhi07G000406Wax gourdcmawgoB0890
CmaCh04G000980CsGy5G008910Cucumber (Gy14) v2cgybcmaB674
CmaCh04G000980Carg24467Silver-seed gourdcarcmaB1249
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G000980Cucurbita maxima (Rimu)cmacmaB531
CmaCh04G000980Cucumber (Gy14) v1cgycmaB0493
CmaCh04G000980Cucurbita moschata (Rifu)cmacmoB730
CmaCh04G000980Wild cucumber (PI 183967)cmacpiB740
CmaCh04G000980Cucumber (Chinese Long) v2cmacuB747
CmaCh04G000980Cucurbita pepo (Zucchini)cmacpeB722
CmaCh04G000980Bottle gourd (USVL1VR-Ls)cmalsiB660
CmaCh04G000980Cucumber (Gy14) v2cgybcmaB660
CmaCh04G000980Silver-seed gourdcarcmaB0949
CmaCh04G000980Cucumber (Chinese Long) v3cmacucB0873
CmaCh04G000980Cucumber (Chinese Long) v3cmacucB0894
CmaCh04G000980Watermelon (97103) v2cmawmbB729