Lsi04G009170 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGACAAAAAGTACTACCATGTCTTCTTCTCTGATCTTAAAACTCATCTTACTCAGCCTTTTCTTCAGCCTACTCTCTTCTAACTCTGATTTTGATGATGATGGTAGAAGGGTACAAGACATTATTCAAGTTGGGCCAGTCTACTTTTGATTTAATTTTGATATTTTTTAATTACTTTTTTTTTTTTTTTTTTTGTTATTTTTGTAAAACCTTGTAGATTTATATTGTGTACATGGGGAGCAAGCTAGAGGACCCTGATTCTGCTCATTTGCATCATAGGGCAATGTTGGAAGAAGTTGTTGGCAGGTTAATACTCCTTATTATTTACACTGTTAATTAAAAAACATCAGTCGCCATTCTAATATATTCACTCCAATTTGTTGTTTTGTATGTATTACAAAAAGTACTTTTATGCTTTTTCAGCGATTTTTCTCCAGAATCTTTGATATACACTTACAAGAGAAGTTTTAATGGATTTGCGGTGAAGCTTACCGACGAAGAAGCTCAAAGGATTGTTAGTACGTAATCGTTGTTAAAAAATACTTGCATGCATTCTGAACTATACCATTTGATTTTTTTTTTCAATAATTAATATCATGTACACTTTGTCATAAAACAAACTCTTCTTTCTTTCTTTTCTTTTTTTTTTTTTGAAAAATATTTTTGACTTTTTTCTCTTGGATACATAGTTAAGGTGGGATGGAAAAAAATGGGTGTGTACCCAGCTAGAATGCACCAAAATATATTTTTTTATTCTTTTGTTTCAAATATCATTACAACTGCGTTTGTCATTATTGATTGTTTTATGACTTTTCAATACAACTAATTATAAGTCGTTGTTGACATTTATTATCTATCATTATAAAATTTTCTTTAACAATTTATCATTATTGTCAACAAATTTGTCACACCCCATCCCAAATTAACATATCTAACTTAGAGCATGACATGAAGACATGAAACTCATCATCAATAAAATCGTATAAACCTTAAATGAAGGAAAACCCATCAATGTATGTTTACTGAAAACGGATCACATTTGTATATAAGAAATTTACTAATAAACCCTCCATAATAACCTATTAACAAACTTTAATATGCTCCTTTTTATAACATTTAAAACACACTATAGGAAATCTATAACATAATGTACAAATGTTGATCTAGAGAAGTGGCTATAGGTAAAGTTTTCAGTAAAAAATACGTTAATGGGTTTTCCTTCCTTTAAGTTTTACAGTTTTATTGACGATGAGTTTCATGTTTTCATGTCACACTCTAAGTTAGATAGGTTAATCTGGAGAGGGGCGTGATAAATTACTCAAAAGTTTGATTTTTTTTTATTATTATTTTTATTTTTTATTTATGAAACCTTTATATTGACATTGAGAATCTGTCATAAAAATGTTAATAATGTCAAGAATACCTTATATACGTCATAGGATTACATACAATGACACATATTTATGGTCATTGAGGTTCAACTAATAACAATGTTCCAGTGTCAAATAAATACATCTCATGAAATTTATTAAATGTCAAAGAAATGCTTAATTATAATGATAAAAATTTATTTGTTTGATACATGTCATTAAAATACATTTCCTCCAATTTGGACACAAAATACAAATATGAACTAACAATAGAGTTGGTAACATTAGCTCTTCAAAGTTGTTTATTCTTTTTTTTTTTCAAATATTTTTGAGTTTTTTCAGTCACGTGCGTAGTTGGAGTCTACTGTAAAAAAAATAGGTGTAGTCTAGGATACATCAAGTTATTATTAATTAATCATATTTTTTGTTCATGATTTAGCAGTTCAAAGTTGTTTTATTGTTTCAAAATGTGTATTAAATCACCTGACGAAATGTCTCAGCTAAGGAGGGTGTGGTGTCTGTGTTTCCAAGTGAAAACAACCAACTTCACACGACAAGATCATGGGATTTTCTTGGTTTTCCATCAAATGTTGCTCGCATGAATAAGGTGGAGCAACGTAATCGTTGGAGTTTTCGACAGTGGAATTTGGTCGGACCATCCCAGTTTTAGTGACAAAGGCTACGGTCCTCCTCCAACCAAATGGAAGGGCATTTGCCAATTCTCTGCCAACTTTACTTGCAACAAGTAAACATTTATAAAACACTATATATCCTTATTTAATCTGCGATTTGCACTCAAAATTTTCAATAATTTTATTAATTATCATGAAAATATTTAGAAAAATTATTGGAGCTCGAGCATATCGTAGCAAGAAGACCCTTCCCCCAGGTGACATTAGAAGTCCAATTGATACAAACGGTCATGGAACGCACACTGCGTCGACGGTGGCCGGTGGACTTGTGAACAAAGCAAGTATGAACGGTCTCGGGCTCGCGACAGCGAGAGGAGGGGTCCCCTCTGCACGTATTGCTGTGTACAAAGTATGTTGGTCAGATGAATGTGCCGACGCCGACATGCTTGCAGCATTTGATGATGCCATTGCTGACGGAGTCGATATTATATCCATTTCTGCTGGCGGGAAGTTAACTCAGCCTTATTTTGAACATACCATTTCCATTGGAGCTTTCCATGCATTAAAACGTGGAATATTGACCTCCAGTAAATTGGGTCTCTAGGTTTCAAAACTCACACTTTTAACCTCAGATTTTCACCAAATACTCACTAACTCCAATTAGGGTTAATGTTTATTAATTAATTTAAAAGAATTCCAATCAATTAAGTTGTAGTATTTATCATCACTATTAAAATTAATTTTGTCACACAAGTGCAGCTTGGCAACAAAAATAACTTTCAGGTTGCTTTATTTTTTGCAAATGCATCCATCTTTCTACATCTAATATAATTAATCACACACAAAAGAAAAATTTTAAAATATTTTAAAAAAGAAGTAAAAAAAGTTTTTCATATAGCAAAATAAGATTGAAAAATTGGGTAGGATGCGCAAAAATAGATGTAATGTAGAATGCAAATAACTATTTTTTCGAGAAATATTTACATAATAATTATTTTATATAATTTTTTTAGGTTAAAAATATCGTTTTGGTTCCTATACTTTGAGATTTGTTCAATTTTAGTTTCTATATTTTCAAATGTCTTATATAGGTACCCTCAATAAATCTTAAATTTAGTTTCTATTGCTAGCTTATCGTTGACCTTTTTTTAATAAAAAAAAAATTAGTCCCTATTTTTTGTCTATTGTTGCATTTTTTCCTACAAATTTTGAAAATATATTCATATATTGTATTTTCTTATAAGAAAATTACTACTCTTATTTAACCAATTTTGATAAAAGTTAACTTCGGGAGACTAAATTTACCATTTATTGAAAGTGGGACACTTAAAAATATAAAACTAAAATTGAACAAACTCTAAAGTACAAGGACCAAAATGATATATTAACCATTTTTATATTAAAAAAAATCTAGTAATTTGTTTTAATACTAATAATAAGCTTGTTTTTACATTTTTTTTTTATAGTTAATATGAAAGCTAGTTTAATGAATATAAGACACTATATTATTATCATCTCAAATGTTGATAGTTCAATCTTATATATGTTGAAACACATGCACAATTTGGGTTCTTATTATAAACTTGAAATGCTTTTTTATTCTAATTTTTTATGAAAGTACAGAGGATTTAAGTTAACGCATTCGATGATCTGAAAAATCAATATCTCCTCATTTATGGTGGAGATGTACCAAACAAAGGATCCAATAGCTCCACCTCTAGGTAATCATTTTACTCTCTAATTTATATATGTAAAGATGAATTTGTAGGGTTAAAAAAAACTGAAGTCAATATTATTGAAAATGCAGATTTTGCAAGGAGAACTCAGTGAATCCTAACTTGGTGAAGGGAAAAATCCTTGTTTGTGATGCCCAATTGTCTTCCAAAAAATTTGCTTCCTTGGGTGGCCCAGCCGGCGTCCTTATGCAAGCTTATAGAGATCATGCTGTGTCCTATCCCTTGCCAGCTTCTACTCTCAAGTTAGAAGATGGCAGTAAAATTAAGAGCTACATGACTTCAACTAAGTAA ATGATGACAAAAAGTACTACCATGTCTTCTTCTCTGATCTTAAAACTCATCTTACTCAGCCTTTTCTTCAGCCTACTCTCTTCTAACTCTGATTTTGATGATGATGGTAGAAGGATTTATATTGTGTACATGGGGAGCAAGCTAGAGGACCCTGATTCTGCTCATTTGCATCATAGGGCAATGTTGGAAGAAGTTGTTGGCAGCGATTTTTCTCCAGAATCTTTGATATACACTTACAAGAGAAGTTTTAATGGATTTGCGGTGAAGCTTACCGACGAAGAAGCTCAAAGGATTGTTAGTACTGGAATTTGGTCGGACCATCCCAGTTTTAGTGACAAAGGCTACGGTCCTCCTCCAACCAAATGGAAGGGCATTTGCCAATTCTCTGCCAACTTTACTTGCAACAAAAAAATTATTGGAGCTCGAGCATATCGTAGCAAGAAGACCCTTCCCCCAGGTGACATTAGAAGTCCAATTGATACAAACGGTCATGGAACGCACACTGCGTCGACGGTGGCCGGTGGACTTGTGAACAAAGCAAGTATGAACGGTCTCGGGCTCGCGACAGCGAGAGGAGGGGTCCCCTCTGCACGTATTGCTGTGTACAAAGTATGTTGGTCAGATGAATGTGCCGACGCCGACATGCTTGCAGCATTTGATGATGCCATTGCTGACGGAGTCGATATTATATCCATTTCTGCTGGCGGGAAATTTTGCAAGGAGAACTCAGTGAATCCTAACTTGGTGAAGGGAAAAATCCTTGTTTGTGATGCCCAATTGTCTTCCAAAAAATTTGCTTCCTTGGGTGGCCCAGCCGGCGTCCTTATGCAAGCTTATAGAGATCATGCTGTGTCCTATCCCTTGCCAGCTTCTACTCTCAAGTTAGAAGATGGCAGTAAAATTAAGAGCTACATGACTTCAACTAAGTAA ATGATGACAAAAAGTACTACCATGTCTTCTTCTCTGATCTTAAAACTCATCTTACTCAGCCTTTTCTTCAGCCTACTCTCTTCTAACTCTGATTTTGATGATGATGGTAGAAGGATTTATATTGTGTACATGGGGAGCAAGCTAGAGGACCCTGATTCTGCTCATTTGCATCATAGGGCAATGTTGGAAGAAGTTGTTGGCAGCGATTTTTCTCCAGAATCTTTGATATACACTTACAAGAGAAGTTTTAATGGATTTGCGGTGAAGCTTACCGACGAAGAAGCTCAAAGGATTGTTAGTACTGGAATTTGGTCGGACCATCCCAGTTTTAGTGACAAAGGCTACGGTCCTCCTCCAACCAAATGGAAGGGCATTTGCCAATTCTCTGCCAACTTTACTTGCAACAAAAAAATTATTGGAGCTCGAGCATATCGTAGCAAGAAGACCCTTCCCCCAGGTGACATTAGAAGTCCAATTGATACAAACGGTCATGGAACGCACACTGCGTCGACGGTGGCCGGTGGACTTGTGAACAAAGCAAGTATGAACGGTCTCGGGCTCGCGACAGCGAGAGGAGGGGTCCCCTCTGCACGTATTGCTGTGTACAAAGTATGTTGGTCAGATGAATGTGCCGACGCCGACATGCTTGCAGCATTTGATGATGCCATTGCTGACGGAGTCGATATTATATCCATTTCTGCTGGCGGGAAATTTTGCAAGGAGAACTCAGTGAATCCTAACTTGGTGAAGGGAAAAATCCTTGTTTGTGATGCCCAATTGTCTTCCAAAAAATTTGCTTCCTTGGGTGGCCCAGCCGGCGTCCTTATGCAAGCTTATAGAGATCATGCTGTGTCCTATCCCTTGCCAGCTTCTACTCTCAAGTTAGAAGATGGCAGTAAAATTAAGAGCTACATGACTTCAACTAAGTAA MMTKSTTMSSSLILKLILLSLFFSLLSSNSDFDDDGRRIYIVYMGSKLEDPDSAHLHHRAMLEEVVGSDFSPESLIYTYKRSFNGFAVKLTDEEAQRIVSTGIWSDHPSFSDKGYGPPPTKWKGICQFSANFTCNKKIIGARAYRSKKTLPPGDIRSPIDTNGHGTHTASTVAGGLVNKASMNGLGLATARGGVPSARIAVYKVCWSDECADADMLAAFDDAIADGVDIISISAGGKFCKENSVNPNLVKGKILVCDAQLSSKKFASLGGPAGVLMQAYRDHAVSYPLPASTLKLEDGSKIKSYMTSTK
BLAST of Lsi04G009170 vs. Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 2.4e-71 Identity = 154/311 (49.52%), Postives = 189/311 (60.77%), Query Frame = 1
BLAST of Lsi04G009170 vs. Swiss-Prot
Match: SBT4E_ARATH (Subtilisin-like protease SBT4.14 OS=Arabidopsis thaliana GN=SBT4.14 PE=2 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.0e-40 Identity = 96/192 (50.00%), Postives = 125/192 (65.10%), Query Frame = 1
BLAST of Lsi04G009170 vs. Swiss-Prot
Match: SBT4F_ARATH (Subtilisin-like protease SBT4.15 OS=Arabidopsis thaliana GN=SBT4.15 PE=3 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.9e-40 Identity = 84/141 (59.57%), Postives = 102/141 (72.34%), Query Frame = 1
BLAST of Lsi04G009170 vs. Swiss-Prot
Match: SBT47_ARATH (Subtilisin-like protease SBT4.7 OS=Arabidopsis thaliana GN=SBT4.7 PE=3 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.4e-39 Identity = 81/140 (57.86%), Postives = 96/140 (68.57%), Query Frame = 1
BLAST of Lsi04G009170 vs. Swiss-Prot
Match: SBT4C_ARATH (Subtilisin-like protease SBT4.12 OS=Arabidopsis thaliana GN=SBT4.12 PE=2 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.9e-39 Identity = 79/141 (56.03%), Postives = 97/141 (68.79%), Query Frame = 1
BLAST of Lsi04G009170 vs. TrEMBL
Match: A0A0A0KNZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G187870 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 5.7e-67 Identity = 152/294 (51.70%), Postives = 177/294 (60.20%), Query Frame = 1
BLAST of Lsi04G009170 vs. TrEMBL
Match: A0A0A0KLR4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G187880 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 5.7e-59 Identity = 134/239 (56.07%), Postives = 150/239 (62.76%), Query Frame = 1
BLAST of Lsi04G009170 vs. TrEMBL
Match: A0A0A0KJN5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G141040 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 2.0e-56 Identity = 151/356 (42.42%), Postives = 186/356 (52.25%), Query Frame = 1
BLAST of Lsi04G009170 vs. TrEMBL
Match: A0A0A0KRC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G613580 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 5.9e-56 Identity = 118/219 (53.88%), Postives = 145/219 (66.21%), Query Frame = 1
BLAST of Lsi04G009170 vs. TrEMBL
Match: A0A0A0KLY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G187860 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 8.5e-55 Identity = 105/139 (75.54%), Postives = 118/139 (84.89%), Query Frame = 1
BLAST of Lsi04G009170 vs. TAIR10
Match: AT4G00230.1 (AT4G00230.1 xylem serine peptidase 1) HSP 1 Score: 168.7 bits (426), Expect = 5.6e-42 Identity = 96/192 (50.00%), Postives = 125/192 (65.10%), Query Frame = 1
BLAST of Lsi04G009170 vs. TAIR10
Match: AT5G03620.1 (AT5G03620.1 Subtilisin-like serine endopeptidase family protein) HSP 1 Score: 167.2 bits (422), Expect = 1.6e-41 Identity = 84/141 (59.57%), Postives = 102/141 (72.34%), Query Frame = 1
BLAST of Lsi04G009170 vs. TAIR10
Match: AT5G58820.1 (AT5G58820.1 Subtilisin-like serine endopeptidase family protein) HSP 1 Score: 164.9 bits (416), Expect = 8.1e-41 Identity = 81/140 (57.86%), Postives = 96/140 (68.57%), Query Frame = 1
BLAST of Lsi04G009170 vs. TAIR10
Match: AT5G59090.1 (AT5G59090.1 subtilase 4.12) HSP 1 Score: 164.5 bits (415), Expect = 1.1e-40 Identity = 79/141 (56.03%), Postives = 97/141 (68.79%), Query Frame = 1
BLAST of Lsi04G009170 vs. TAIR10
Match: AT5G58830.1 (AT5G58830.1 Subtilisin-like serine endopeptidase family protein) HSP 1 Score: 163.3 bits (412), Expect = 2.4e-40 Identity = 78/140 (55.71%), Postives = 97/140 (69.29%), Query Frame = 1
BLAST of Lsi04G009170 vs. NCBI nr
Match: gi|659123557|ref|XP_008461721.1| (PREDICTED: LOW QUALITY PROTEIN: cucumisin-like [Cucumis melo]) HSP 1 Score: 271.9 bits (694), Expect = 1.3e-69 Identity = 155/311 (49.84%), Postives = 190/311 (61.09%), Query Frame = 1
BLAST of Lsi04G009170 vs. NCBI nr
Match: gi|778701133|ref|XP_004149947.2| (PREDICTED: cucumisin-like [Cucumis sativus]) HSP 1 Score: 271.6 bits (693), Expect = 1.7e-69 Identity = 158/283 (55.83%), Postives = 183/283 (64.66%), Query Frame = 1
BLAST of Lsi04G009170 vs. NCBI nr
Match: gi|71153243|sp|Q39547.1|CUCM1_CUCME (RecName: Full=Cucumisin; AltName: Allergen=Cuc m 1; Flags: Precursor [Cucumis melo]) HSP 1 Score: 270.4 bits (690), Expect = 3.9e-69 Identity = 154/311 (49.52%), Postives = 189/311 (60.77%), Query Frame = 1
BLAST of Lsi04G009170 vs. NCBI nr
Match: gi|659123579|ref|XP_008461729.1| (PREDICTED: cucumisin-like isoform X1 [Cucumis melo]) HSP 1 Score: 265.8 bits (678), Expect = 9.6e-68 Identity = 154/283 (54.42%), Postives = 179/283 (63.25%), Query Frame = 1
BLAST of Lsi04G009170 vs. NCBI nr
Match: gi|778701136|ref|XP_011654970.1| (PREDICTED: cucumisin-like [Cucumis sativus]) HSP 1 Score: 262.7 bits (670), Expect = 8.1e-67 Identity = 152/294 (51.70%), Postives = 177/294 (60.20%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |