Lsi04G007860 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi04G007860
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionGRAM domain-containing protein / ABA-responsive protein-related
Locationchr04 : 7394056 .. 7395103 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCAAGTTCAATGATCAGAGAGCTTGGAAGAAAAGGTTACAGATTTGTTAATGGAATCCTTGAACATGGTAAACATGATTTGCTTTTTTCTTCATTTGAGAAAGAATCTCTCTCTGAATTTTACTTTCTTTCCTAGCTGATTATAATGATGAAATGATTGATTGGATTGGATTGTCCTCTTTTGTTTATCTCCCTAGAAATGCTAGAAACTTCCATTTCTCGATAAATGCAATGCATATACGAATAATGAATTGTTGTAGGTCGATATGAACATGATTCAACTAGTTAAAGCAAATATTACTACATGATTACAAAGTCTGTCCTACAGAGCGTTAAAAACCAAAAACGAAAGCATTACTCGTCTCTCTTTCTATGTAAACAGAGATTGACATTGATTCTTCCTGCATTGATAATAATGTATATATTAAAAATATATACTCGATTCGAAGGATTAAAAATGATTGACAGTTACATTGGAATGACGACGTGCAGTTAAACTGTCGCCGAACATCGCCAAAACCGTTAAGGGGAAGCTGTGGTTGGGGACAAAACTTGTCCAGTTTGGAGGAAGTGAGAAGATTTTTCAGAAGATGTTCAATCTCAGACAAGGAGACAAGCTGCTGAGTTCTGCACAATGTTATTTGTCAACCACAGCAGGTCCCATAGCAGGTCTCCTCTTTGTCTCCACCCATGTAGTTGCCTTCTGCAGTGACAGACCAATCATAATTTCTTCTCCACAAGGAGAACTAGGCAGATTGTTTTACAAAGTACATAATAATTCCTTTAACATTTACATTTGACTGTTTTTCCTCTTTCTATCTCTCTCTCTCTCTGCCTGGTTGCTAAGTTTTTTCTACAATGCTTATTTCCTCAGGTTATGATCCCAGTGAAGAAGGTGAAGAGAGTTAACCAAAGAAACAATGTAAGCAATCCATCAAAAAAGTACATTCAAGTGGTGACTGTGGATGATTTTGACTTCTGGTTTATGGGTTTTTTGAATTATGAGAAAGCAGTTAAGTTCCTCCAAAAGGGGGTTTTTTCTAAGGAT

mRNA sequence

CTCAAGTTCAATGATCAGAGAGCTTGGAAGAAAAGGTTACAGATTTGTTAATGGAATCCTTGAACATGCTGATTATAATGATGAAATGATTGATTGGATTGGATTGTCCTCTTTTGTTTATCTCCCTAGAAATGCTAGAAACTTCCATTTCTCGATAAATGCAATGCATATACGAATAATGAATTGTTGTAGCAAATATTACTACATGATTACAAAGTCTGTCCTACAGAGCGTTAAAAACCAAAAACGAAAGCATTACTCGTCTCTCTTTCTATGTAAACAGAGATTGACATTGATTCTTCCTGCATTGATAATAATGTATATATTAAAAATATATACTCGATTCGAAGGATTAAAAATGATTGACATTAAACTGTCGCCGAACATCGCCAAAACCGTTAAGGGGAAGCTGTGGTTGGGGACAAAACTTGTCCAGTTTGGAGGAAGTGAGAAGATTTTTCAGAAGATGTTCAATCTCAGACAAGGAGACAAGCTGCTGAGTTCTGCACAATGTTATTTGTCAACCACAGCAGGTCCCATAGCAGGTCTCCTCTTTGTCTCCACCCATGTAGTTGCCTTCTGCAGTGACAGACCAATCATAATTTCTTCTCCACAAGGAGAACTAGGCAGATTGTTTTACAAAGTTATGATCCCAGTGAAGAAGGTGAAGAGAGTTAACCAAAGAAACAATGTAAGCAATCCATCAAAAAAGTACATTCAAGTGGTGACTGTGGATGATTTTGACTTCTGGTTTATGGGTTTTTTGAATTATGAGAAAGCAGTTAAGTTCCTCCAAAAGGGGGTTTTTTCTAAGGAT

Coding sequence (CDS)

ATGATCAGAGAGCTTGGAAGAAAAGGTTACAGATTTGTTAATGGAATCCTTGAACATGCTGATTATAATGATGAAATGATTGATTGGATTGGATTGTCCTCTTTTGTTTATCTCCCTAGAAATGCTAGAAACTTCCATTTCTCGATAAATGCAATGCATATACGAATAATGAATTGTTGTAGCAAATATTACTACATGATTACAAAGTCTGTCCTACAGAGCGTTAAAAACCAAAAACGAAAGCATTACTCGTCTCTCTTTCTATGTAAACAGAGATTGACATTGATTCTTCCTGCATTGATAATAATGTATATATTAAAAATATATACTCGATTCGAAGGATTAAAAATGATTGACATTAAACTGTCGCCGAACATCGCCAAAACCGTTAAGGGGAAGCTGTGGTTGGGGACAAAACTTGTCCAGTTTGGAGGAAGTGAGAAGATTTTTCAGAAGATGTTCAATCTCAGACAAGGAGACAAGCTGCTGAGTTCTGCACAATGTTATTTGTCAACCACAGCAGGTCCCATAGCAGGTCTCCTCTTTGTCTCCACCCATGTAGTTGCCTTCTGCAGTGACAGACCAATCATAATTTCTTCTCCACAAGGAGAACTAGGCAGATTGTTTTACAAAGTTATGATCCCAGTGAAGAAGGTGAAGAGAGTTAACCAAAGAAACAATGTAAGCAATCCATCAAAAAAGTACATTCAAGTGGTGACTGTGGATGATTTTGACTTCTGGTTTATGGGTTTTTTGAATTATGAGAAAGCAGTTAAGTTCCTCCAAAAGGGGGTTTTTTCTAAGGAT

Protein sequence

MIRELGRKGYRFVNGILEHADYNDEMIDWIGLSSFVYLPRNARNFHFSINAMHIRIMNCCSKYYYMITKSVLQSVKNQKRKHYSSLFLCKQRLTLILPALIIMYILKIYTRFEGLKMIDIKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVVTVDDFDFWFMGFLNYEKAVKFLQKGVFSKD
Homology
[Close]
BLAST of Lsi04G007860 vs. Swiss-Prot
Match: GEML4_ARATH (GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.4e-43
Identity = 82/145 (56.55%), Postives = 111/145 (76.55%), Query Frame = 1 

Query: 121 KLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAGL 180
           K+ P + +TVK KL LG +++Q GG EKIF+++F + +G+KL    QCYLSTTAGPIAGL
Sbjct: 68  KIRPKLTETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGL 127

Query: 181 LFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVVT 240
           LF+S+  +AFCS+R I + SPQG++ R+ YKV IP+ K+ RVNQ  N   PS+KY++VVT
Sbjct: 128 LFISSKKMAFCSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVT 187

Query: 241 VDDFDFWFMGFLNYEKAVKFLQKGV 266
           VD FDFWFMGFL+Y+KA   L+K +
Sbjct: 188 VDGFDFWFMGFLSYQKAFNCLEKAL 212

[Close]
BLAST of Lsi04G007860 vs. Swiss-Prot
Match: GEML8_ARATH (Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.2e-43
Identity = 81/145 (55.86%), Postives = 111/145 (76.55%), Query Frame = 1 

Query: 121 KLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAGL 180
           KL P + +TVK KL LG +++Q GG EKI++++F +   +KL  + QCYLSTTAGPIAGL
Sbjct: 69  KLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAGL 128

Query: 181 LFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVVT 240
           LF+S+  +AFCS+R I ++SPQGEL R+ YKV IP+ K+  VNQ  N + PS+KY++VVT
Sbjct: 129 LFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQNTTKPSQKYLEVVT 188

Query: 241 VDDFDFWFMGFLNYEKAVKFLQKGV 266
           VD FDFWFMGFL+Y+KA   L++ +
Sbjct: 189 VDGFDFWFMGFLSYQKAFNCLEQAL 213

[Close]
BLAST of Lsi04G007860 vs. Swiss-Prot
Match: GEML6_ARATH (GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2)

HSP 1 Score: 174.1 bits (440), Expect = 2.1e-42
Identity = 79/145 (54.48%), Postives = 110/145 (75.86%), Query Frame = 1 

Query: 121 KLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAGL 180
           KL P + +TVK KL LG K++Q GG EKI++++F +   +KL  + QCYLSTTAGPIAGL
Sbjct: 69  KLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGL 128

Query: 181 LFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVVT 240
           LF+S+  +AFCS+R I ++SPQG L R+ YKV IP+ K+  VNQ  N   PS+KY+++VT
Sbjct: 129 LFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPLCKINGVNQSQNTKKPSQKYLEIVT 188

Query: 241 VDDFDFWFMGFLNYEKAVKFLQKGV 266
           +D+FDFWFMGF++Y+KA   L+K +
Sbjct: 189 IDNFDFWFMGFVSYQKAFNCLEKAL 213

[Close]
BLAST of Lsi04G007860 vs. Swiss-Prot
Match: GEML7_ARATH (GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-40
Identity = 77/145 (53.10%), Postives = 109/145 (75.17%), Query Frame = 1 

Query: 121 KLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAGL 180
           KL P + +TVK KL LG K++Q GG EKI++++F +   +KL  + QCYLSTT G IAGL
Sbjct: 61  KLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAYQCYLSTTEGSIAGL 120

Query: 181 LFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVVT 240
           LF+S+  +AFCS+R I ++SPQG+L R+ YKV IP+ K+  VNQ  N   PS++Y++VVT
Sbjct: 121 LFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQNTKKPSQRYLEVVT 180

Query: 241 VDDFDFWFMGFLNYEKAVKFLQKGV 266
           VD++DFWFMGF++Y+KA   L+K +
Sbjct: 181 VDNYDFWFMGFVSYQKAFNCLEKAL 205

[Close]
BLAST of Lsi04G007860 vs. Swiss-Prot
Match: GEML1_ARATH (GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 9.0e-30
Identity = 63/148 (42.57%), Postives = 98/148 (66.22%), Query Frame = 1 

Query: 120 IKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAG 179
           +K  P++A     ++  GTK++  GG EK+F++ F+    +KLL +  CYLST+AGP+ G
Sbjct: 110 LKTGPSVADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLG 169

Query: 180 LLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVV 239
           ++++STH +AF SD P+     +  L   +YKV++P  ++K VN   +  N S KYIQV+
Sbjct: 170 VMYLSTHKLAFSSDNPLSYKEGEQTLWS-YYKVVLPANQLKAVNPSTSRVNTSDKYIQVI 229

Query: 240 TVDDFDFWFMGFLNYEKAVKFLQKGVFS 268
           ++D+ +FWFMGF+ YE AVK LQ+ V S
Sbjct: 230 SIDNHEFWFMGFVTYESAVKSLQEAVQS 256

[Close]
BLAST of Lsi04G007860 vs. TrEMBL
Match: A0A0A0KPM0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577990 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 5.8e-68
Identity = 126/146 (86.30%), Postives = 137/146 (93.84%), Query Frame = 1 

Query: 120 IKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAG 179
           +KLSPNIAKTVKGKLWLGTKL+QFGGSE IF KMFNL  GDKLL+SA CYLSTTAGPIAG
Sbjct: 20  VKLSPNIAKTVKGKLWLGTKLLQFGGSENIFHKMFNLEHGDKLLNSAHCYLSTTAGPIAG 79

Query: 180 LLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVV 239
           L+FVSTHVVAFCSDRPIIISSP GE+G++FYKVMIPV KVKRVNQRNNV+NP+KKYIQVV
Sbjct: 80  LIFVSTHVVAFCSDRPIIISSPHGEIGKIFYKVMIPVNKVKRVNQRNNVNNPAKKYIQVV 139

Query: 240 TVDDFDFWFMGFLNYEKAVKFLQKGV 266
           TVDDFDFWFMGFLN+EKA KF+Q GV
Sbjct: 140 TVDDFDFWFMGFLNHEKAFKFIQNGV 165

[Close]
BLAST of Lsi04G007860 vs. TrEMBL
Match: M5Y243_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026708mg PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.0e-48
Identity = 92/146 (63.01%), Postives = 120/146 (82.19%), Query Frame = 1 

Query: 120 IKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAG 179
           ++L P I +TVKGKL LG K++Q GG EK+F+  F++R G+KLL  +QCYLSTTAGPIAG
Sbjct: 75  VRLGPKITETVKGKLSLGAKIIQVGGLEKVFKHAFSVRAGEKLLKVSQCYLSTTAGPIAG 134

Query: 180 LLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVV 239
           LLF+ST  +AFCS+R I +SSP GEL R+ YKV+IPV K+KRVNQ  NV  PS+KYI++V
Sbjct: 135 LLFISTDKIAFCSERSIKLSSPNGELIRVHYKVVIPVNKIKRVNQSENVKKPSEKYIEIV 194

Query: 240 TVDDFDFWFMGFLNYEKAVKFLQKGV 266
           TVD+FDFWFMGFLNY+K +K+L++ +
Sbjct: 195 TVDNFDFWFMGFLNYQKTLKYLEEAI 220

[Close]
BLAST of Lsi04G007860 vs. TrEMBL
Match: A0A0B2RYU1_GLYSO (GEM-like protein 4 OS=Glycine soja GN=glysoja_013574 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.3e-48
Identity = 105/224 (46.88%), Postives = 145/224 (64.73%), Query Frame = 1 

Query: 42  ARNFHFSINAMHIRIMNCCSKYYYMITKSVLQSVKNQKRKHYSSLFLCKQRLTLILPALI 101
           A  +H   ++    + + C KY    +KS+ +S +N+   H+ S FL + R         
Sbjct: 16  ASTYHVGKSSKRYLLPDSCGKY----SKSITKSKQNRAPFHHKSGFLQRFRE-------- 75

Query: 102 IMYILKIYTRFEGLKMIDIKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDK 161
                             ++L P I  TVKGKL +G +++Q GG EK+F ++F++R+G+K
Sbjct: 76  -----------------HVRLGPKITDTVKGKLSMGARILQVGGVEKVFMQLFSVREGEK 135

Query: 162 LLSSAQCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKR 221
           LL ++QCYLSTT+GPIAGLLF+STH VAFCSDR I ISSP GE  R+ YKV IP+ K+K 
Sbjct: 136 LLKASQCYLSTTSGPIAGLLFISTHKVAFCSDRSIKISSPNGEDVRVHYKVSIPLTKIKS 195

Query: 222 VNQRNNVSNPSKKYIQVVTVDDFDFWFMGFLNYEKAVKFLQKGV 266
           VN+  NV  PS+KYI++VTVDDFDFWFMGF NY+KA++ LQ+ V
Sbjct: 196 VNKSQNVEKPSQKYIEIVTVDDFDFWFMGFFNYQKALRCLQQAV 210

[Close]
BLAST of Lsi04G007860 vs. TrEMBL
Match: I1LF97_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G286800 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.3e-48
Identity = 105/224 (46.88%), Postives = 145/224 (64.73%), Query Frame = 1 

Query: 42  ARNFHFSINAMHIRIMNCCSKYYYMITKSVLQSVKNQKRKHYSSLFLCKQRLTLILPALI 101
           A  +H   ++    + + C KY    +KS+ +S +N+   H+ S FL + R         
Sbjct: 16  ASTYHVGKSSKRYLLPDSCGKY----SKSITKSKQNRAPFHHKSGFLQRFRE-------- 75

Query: 102 IMYILKIYTRFEGLKMIDIKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDK 161
                             ++L P I  TVKGKL +G +++Q GG EK+F ++F++R+G+K
Sbjct: 76  -----------------HVRLGPKITDTVKGKLSMGARILQVGGVEKVFMQLFSVREGEK 135

Query: 162 LLSSAQCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKR 221
           LL ++QCYLSTT+GPIAGLLF+STH VAFCSDR I ISSP GE  R+ YKV IP+ K+K 
Sbjct: 136 LLKASQCYLSTTSGPIAGLLFISTHKVAFCSDRSIKISSPNGEDVRVHYKVSIPLTKIKS 195

Query: 222 VNQRNNVSNPSKKYIQVVTVDDFDFWFMGFLNYEKAVKFLQKGV 266
           VN+  NV  PS+KYI++VTVDDFDFWFMGF NY+KA++ LQ+ V
Sbjct: 196 VNKSQNVEKPSQKYIEIVTVDDFDFWFMGFFNYQKALRCLQQAV 210

[Close]
BLAST of Lsi04G007860 vs. TrEMBL
Match: A0A061E267_THECC (GRAM domain-containing protein / ABA-responsive protein-related OS=Theobroma cacao GN=TCM_007675 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.0e-48
Identity = 92/146 (63.01%), Postives = 121/146 (82.88%), Query Frame = 1 

Query: 120 IKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAG 179
           ++L P I +TVKGKL LG +++Q GG EKIF+++F++R+G+KLL + QCYLSTTAGPIAG
Sbjct: 78  VRLGPKITETVKGKLSLGARILQVGGVEKIFKRLFSVREGEKLLKACQCYLSTTAGPIAG 137

Query: 180 LLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVV 239
           LLFVS+  VAFCS+R I I SP+GEL R+ YKV+IP++K+K VNQ  N+  PS+KYI++V
Sbjct: 138 LLFVSSEKVAFCSERSIKIPSPKGELPRVHYKVLIPLEKIKGVNQSENIKKPSQKYIEMV 197

Query: 240 TVDDFDFWFMGFLNYEKAVKFLQKGV 266
           TVD FDFWFMGFLNY KA K+LQ+ +
Sbjct: 198 TVDGFDFWFMGFLNYRKAFKYLQQAI 223

[Close]
BLAST of Lsi04G007860 vs. TAIR10
Match: AT5G08350.1 (AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 177.9 bits (450), Expect = 8.1e-45
Identity = 82/145 (56.55%), Postives = 111/145 (76.55%), Query Frame = 1 

Query: 121 KLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAGL 180
           K+ P + +TVK KL LG +++Q GG EKIF+++F + +G+KL    QCYLSTTAGPIAGL
Sbjct: 68  KIRPKLTETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGL 127

Query: 181 LFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVVT 240
           LF+S+  +AFCS+R I + SPQG++ R+ YKV IP+ K+ RVNQ  N   PS+KY++VVT
Sbjct: 128 LFISSKKMAFCSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVT 187

Query: 241 VDDFDFWFMGFLNYEKAVKFLQKGV 266
           VD FDFWFMGFL+Y+KA   L+K +
Sbjct: 188 VDGFDFWFMGFLSYQKAFNCLEKAL 212

[Close]
BLAST of Lsi04G007860 vs. TAIR10
Match: AT5G23370.1 (AT5G23370.1 GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 176.4 bits (446), Expect = 2.4e-44
Identity = 81/145 (55.86%), Postives = 111/145 (76.55%), Query Frame = 1 

Query: 121 KLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAGL 180
           KL P + +TVK KL LG +++Q GG EKI++++F +   +KL  + QCYLSTTAGPIAGL
Sbjct: 69  KLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAGL 128

Query: 181 LFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVVT 240
           LF+S+  +AFCS+R I ++SPQGEL R+ YKV IP+ K+  VNQ  N + PS+KY++VVT
Sbjct: 129 LFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQNTTKPSQKYLEVVT 188

Query: 241 VDDFDFWFMGFLNYEKAVKFLQKGV 266
           VD FDFWFMGFL+Y+KA   L++ +
Sbjct: 189 VDGFDFWFMGFLSYQKAFNCLEQAL 213

[Close]
BLAST of Lsi04G007860 vs. TAIR10
Match: AT5G23350.1 (AT5G23350.1 GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-43
Identity = 79/145 (54.48%), Postives = 110/145 (75.86%), Query Frame = 1 

Query: 121 KLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAGL 180
           KL P + +TVK KL LG K++Q GG EKI++++F +   +KL  + QCYLSTTAGPIAGL
Sbjct: 131 KLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGL 190

Query: 181 LFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVVT 240
           LF+S+  +AFCS+R I ++SPQG L R+ YKV IP+ K+  VNQ  N   PS+KY+++VT
Sbjct: 191 LFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPLCKINGVNQSQNTKKPSQKYLEIVT 250

Query: 241 VDDFDFWFMGFLNYEKAVKFLQKGV 266
           +D+FDFWFMGF++Y+KA   L+K +
Sbjct: 251 IDNFDFWFMGFVSYQKAFNCLEKAL 275

[Close]
BLAST of Lsi04G007860 vs. TAIR10
Match: AT5G23360.1 (AT5G23360.1 GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 168.3 bits (425), Expect = 6.4e-42
Identity = 77/145 (53.10%), Postives = 109/145 (75.17%), Query Frame = 1 

Query: 121 KLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAGL 180
           KL P + +TVK KL LG K++Q GG EKI++++F +   +KL  + QCYLSTT G IAGL
Sbjct: 61  KLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAYQCYLSTTEGSIAGL 120

Query: 181 LFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVVT 240
           LF+S+  +AFCS+R I ++SPQG+L R+ YKV IP+ K+  VNQ  N   PS++Y++VVT
Sbjct: 121 LFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQNTKKPSQRYLEVVT 180

Query: 241 VDDFDFWFMGFLNYEKAVKFLQKGV 266
           VD++DFWFMGF++Y+KA   L+K +
Sbjct: 181 VDNYDFWFMGFVSYQKAFNCLEKAL 205

[Close]
BLAST of Lsi04G007860 vs. TAIR10
Match: AT1G28200.1 (AT1G28200.1 FH interacting protein 1)

HSP 1 Score: 132.1 bits (331), Expect = 5.1e-31
Identity = 63/148 (42.57%), Postives = 98/148 (66.22%), Query Frame = 1 

Query: 120 IKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAG 179
           +K  P++A     ++  GTK++  GG EK+F++ F+    +KLL +  CYLST+AGP+ G
Sbjct: 110 LKTGPSVADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLG 169

Query: 180 LLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVV 239
           ++++STH +AF SD P+     +  L   +YKV++P  ++K VN   +  N S KYIQV+
Sbjct: 170 VMYLSTHKLAFSSDNPLSYKEGEQTLWS-YYKVVLPANQLKAVNPSTSRVNTSDKYIQVI 229

Query: 240 TVDDFDFWFMGFLNYEKAVKFLQKGVFS 268
           ++D+ +FWFMGF+ YE AVK LQ+ V S
Sbjct: 230 SIDNHEFWFMGFVTYESAVKSLQEAVQS 256

[Close]
BLAST of Lsi04G007860 vs. NCBI nr
Match: gi|659090209|ref|XP_008445893.1| (PREDICTED: GEM-like protein 4 [Cucumis melo])

HSP 1 Score: 269.6 bits (688), Expect = 5.8e-69
Identity = 129/146 (88.36%), Postives = 138/146 (94.52%), Query Frame = 1 

Query: 120 IKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAG 179
           +KLSPNIAKTVKGKLWLGTKLVQFGGSEKIF KMFNL QGDKLL+SA CYLSTTAGPIAG
Sbjct: 20  VKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFHKMFNLEQGDKLLNSAHCYLSTTAGPIAG 79

Query: 180 LLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVV 239
           L+FVSTHVVAFCSDRPIIISSP GE+G++FYKVMIPV KVKRVNQRNN +NP+KKYIQVV
Sbjct: 80  LVFVSTHVVAFCSDRPIIISSPHGEVGKVFYKVMIPVNKVKRVNQRNNENNPAKKYIQVV 139

Query: 240 TVDDFDFWFMGFLNYEKAVKFLQKGV 266
           TVDDFDFWFMGFLNYEK  KF+QKGV
Sbjct: 140 TVDDFDFWFMGFLNYEKTFKFIQKGV 165

[Close]
BLAST of Lsi04G007860 vs. NCBI nr
Match: gi|449458799|ref|XP_004147134.1| (PREDICTED: GEM-like protein 4 [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 8.4e-68
Identity = 126/146 (86.30%), Postives = 137/146 (93.84%), Query Frame = 1 

Query: 120 IKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAG 179
           +KLSPNIAKTVKGKLWLGTKL+QFGGSE IF KMFNL  GDKLL+SA CYLSTTAGPIAG
Sbjct: 20  VKLSPNIAKTVKGKLWLGTKLLQFGGSENIFHKMFNLEHGDKLLNSAHCYLSTTAGPIAG 79

Query: 180 LLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVV 239
           L+FVSTHVVAFCSDRPIIISSP GE+G++FYKVMIPV KVKRVNQRNNV+NP+KKYIQVV
Sbjct: 80  LIFVSTHVVAFCSDRPIIISSPHGEIGKIFYKVMIPVNKVKRVNQRNNVNNPAKKYIQVV 139

Query: 240 TVDDFDFWFMGFLNYEKAVKFLQKGV 266
           TVDDFDFWFMGFLN+EKA KF+Q GV
Sbjct: 140 TVDDFDFWFMGFLNHEKAFKFIQNGV 165

[Close]
BLAST of Lsi04G007860 vs. NCBI nr
Match: gi|596296327|ref|XP_007227154.1| (hypothetical protein PRUPE_ppa026708mg [Prunus persica])

HSP 1 Score: 201.8 bits (512), Expect = 1.5e-48
Identity = 92/146 (63.01%), Postives = 120/146 (82.19%), Query Frame = 1 

Query: 120 IKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAG 179
           ++L P I +TVKGKL LG K++Q GG EK+F+  F++R G+KLL  +QCYLSTTAGPIAG
Sbjct: 75  VRLGPKITETVKGKLSLGAKIIQVGGLEKVFKHAFSVRAGEKLLKVSQCYLSTTAGPIAG 134

Query: 180 LLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVV 239
           LLF+ST  +AFCS+R I +SSP GEL R+ YKV+IPV K+KRVNQ  NV  PS+KYI++V
Sbjct: 135 LLFISTDKIAFCSERSIKLSSPNGELIRVHYKVVIPVNKIKRVNQSENVKKPSEKYIEIV 194

Query: 240 TVDDFDFWFMGFLNYEKAVKFLQKGV 266
           TVD+FDFWFMGFLNY+K +K+L++ +
Sbjct: 195 TVDNFDFWFMGFLNYQKTLKYLEEAI 220

[Close]
BLAST of Lsi04G007860 vs. NCBI nr
Match: gi|356536443|ref|XP_003536747.1| (PREDICTED: GEM-like protein 4 [Glycine max])

HSP 1 Score: 200.7 bits (509), Expect = 3.3e-48
Identity = 105/224 (46.88%), Postives = 145/224 (64.73%), Query Frame = 1 

Query: 42  ARNFHFSINAMHIRIMNCCSKYYYMITKSVLQSVKNQKRKHYSSLFLCKQRLTLILPALI 101
           A  +H   ++    + + C KY    +KS+ +S +N+   H+ S FL + R         
Sbjct: 16  ASTYHVGKSSKRYLLPDSCGKY----SKSITKSKQNRAPFHHKSGFLQRFRE-------- 75

Query: 102 IMYILKIYTRFEGLKMIDIKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDK 161
                             ++L P I  TVKGKL +G +++Q GG EK+F ++F++R+G+K
Sbjct: 76  -----------------HVRLGPKITDTVKGKLSMGARILQVGGVEKVFMQLFSVREGEK 135

Query: 162 LLSSAQCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKR 221
           LL ++QCYLSTT+GPIAGLLF+STH VAFCSDR I ISSP GE  R+ YKV IP+ K+K 
Sbjct: 136 LLKASQCYLSTTSGPIAGLLFISTHKVAFCSDRSIKISSPNGEDVRVHYKVSIPLTKIKS 195

Query: 222 VNQRNNVSNPSKKYIQVVTVDDFDFWFMGFLNYEKAVKFLQKGV 266
           VN+  NV  PS+KYI++VTVDDFDFWFMGF NY+KA++ LQ+ V
Sbjct: 196 VNKSQNVEKPSQKYIEIVTVDDFDFWFMGFFNYQKALRCLQQAV 210

[Close]
BLAST of Lsi04G007860 vs. NCBI nr
Match: gi|645228617|ref|XP_008221081.1| (PREDICTED: GEM-like protein 4 [Prunus mume])

HSP 1 Score: 200.3 bits (508), Expect = 4.3e-48
Identity = 92/146 (63.01%), Postives = 119/146 (81.51%), Query Frame = 1 

Query: 120 IKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFQKMFNLRQGDKLLSSAQCYLSTTAGPIAG 179
           +KL P I +TVKGKL LG K++Q GG EK+F+  F++R G+KLL ++QCYLSTTAGPIAG
Sbjct: 79  VKLGPKITETVKGKLSLGAKIIQVGGLEKVFKHAFSVRSGEKLLKASQCYLSTTAGPIAG 138

Query: 180 LLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVKRVNQRNNVSNPSKKYIQVV 239
           LLF+ST  +AFCS+R I +SS  GEL RL YKV+IPV K+KRVNQ  NV  PS+KYI++V
Sbjct: 139 LLFISTDKIAFCSERSIKLSSSNGELIRLHYKVVIPVNKIKRVNQSENVKKPSQKYIEIV 198

Query: 240 TVDDFDFWFMGFLNYEKAVKFLQKGV 266
           TVD+FDFWFMG LNY+K +K+L++ +
Sbjct: 199 TVDNFDFWFMGILNYQKTLKYLEEAI 224

The following BLAST results are available for this feature:
BLAST of Lsi04G007860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GEML4_ARATH1.4e-4356.55GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1[more]
GEML8_ARATH4.2e-4355.86Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1[more]
GEML6_ARATH2.1e-4254.48GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2[more]
GEML7_ARATH1.1e-4053.10GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1[more]
GEML1_ARATH9.0e-3042.57GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1[more]
BLAST of Lsi04G007860 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPM0_CUCSA5.8e-6886.30Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577990 PE=4 SV=1[more]
M5Y243_PRUPE1.0e-4863.01Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026708mg PE=4 SV=1[more]
A0A0B2RYU1_GLYSO2.3e-4846.88GEM-like protein 4 OS=Glycine soja GN=glysoja_013574 PE=4 SV=1[more]
I1LF97_SOYBN2.3e-4846.88Uncharacterized protein OS=Glycine max GN=GLYMA_10G286800 PE=4 SV=1[more]
A0A061E267_THECC3.0e-4863.01GRAM domain-containing protein / ABA-responsive protein-related OS=Theobroma cac... [more]
BLAST of Lsi04G007860 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G08350.18.1e-4556.55 GRAM domain-containing protein / ABA-responsive protein-related[more]
AT5G23370.12.4e-4455.86 GRAM domain-containing protein / ABA-responsive protein-related[more]
AT5G23350.11.2e-4354.48 GRAM domain-containing protein / ABA-responsive protein-related[more]
AT5G23360.16.4e-4253.10 GRAM domain-containing protein / ABA-responsive protein-related[more]
AT1G28200.15.1e-3142.57 FH interacting protein 1[more]
BLAST of Lsi04G007860 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090209|ref|XP_008445893.1|5.8e-6988.36PREDICTED: GEM-like protein 4 [Cucumis melo][more]
gi|449458799|ref|XP_004147134.1|8.4e-6886.30PREDICTED: GEM-like protein 4 [Cucumis sativus][more]
gi|596296327|ref|XP_007227154.1|1.5e-4863.01hypothetical protein PRUPE_ppa026708mg [Prunus persica][more]
gi|356536443|ref|XP_003536747.1|3.3e-4846.88PREDICTED: GEM-like protein 4 [Glycine max][more]
gi|645228617|ref|XP_008221081.1|4.3e-4863.01PREDICTED: GEM-like protein 4 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004182GRAM
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G007860.1Lsi04G007860.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004182GRAM domainPFAMPF02893GRAMcoord: 149..224
score: 1.6
IPR004182GRAM domainSMARTSM00568gram2001ccoord: 148..226
score: 1.2
NoneNo IPR availablePANTHERPTHR31969FAMILY NOT NAMEDcoord: 120..263
score: 1.7
NoneNo IPR availablePANTHERPTHR31969:SF1GEM-LIKE PROTEIN 4-RELATEDcoord: 120..263
score: 1.7