Lsi04G007520 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi04G007520
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionZinc finger protein 3
Locationchr04 : 7003295 .. 7004212 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGAAACTGGAAAAGATAATCGAAATTGCCCTTCTGAAGCTTCTAGTATCTCCGCCACGTCCGACGGCGGACCGGTGAAGATGAAGATGGAGATGGTTGTTGCCGATGAAATCGACGGTGGTGATCGGCAGTCGGAGGAGTCGAACTCACGGTTGTTGTTGGATCTCAAGCTTTCTAACAATATTGAGAATTCCGGCAATGGCGCGCCGGAGATTTTGAACTCCAAGAAGATAGTACCGACGGCTGCGGTGGCGGTGGCGGTGACGGTGGATTCTTCTTCTTCTCAAGGTCATACAAATAATGAATTATCTTCAAATTCAAAATCTAGGGTTTTTTCATGCAACTTTTGCAAGAGGGAATTTTCCACCTCCCAAGCCCTAGGAGGCCACCAAAATGCACACAAGCAAGAAAGAGCCATGGCCAAGCGCCGGCAAGGAATGGAACTCGGAAGCGGCGCCAATGTTGTCGGGCCACCGTACTTGTCGTCGTACTATAGTCCATATTCTACCCTCTCGCCTCATCCACTCTACGGATCGTCGCTCGGGAAATCGCTCGGAATACGGATGGATTCAATGATTCATAAACCATCGTATCGGTGGCTCGGGTCTCCCGCGCTACAGTTTCACGGCGGAGTAGATGGTGCTTGGGCTTCCCGGCCGGTGGTGGTGAATAGTAATAATAATAACAATTCAAAATTATTGGCGTTTGAAAGGCTAAAGATGGAGGGAATTCAAGCTCATAATGGTGGATTTCGATTGTCATCCGCGATCAATAATGCAACTGAATCAATGAGAAGATTTGAAGAAGATGGAACGATTTCGATACCGAATTTGAGTCGTTCTGAGCCGCCGGTGTTGAAGATGGATCATCATGTGGAAGAAAGCCATGAACTTGATTTATCACTCAAGCTTTAG

mRNA sequence

ATGGCTGAAACTGGAAAAGATAATCGAAATTGCCCTTCTGAAGCTTCTAGTATCTCCGCCACGTCCGACGGCGGACCGGTGAAGATGAAGATGGAGATGGTTGTTGCCGATGAAATCGACGGTGGTGATCGGCAGTCGGAGGAGTCGAACTCACGGTTGTTGTTGGATCTCAAGCTTTCTAACAATATTGAGAATTCCGGCAATGGCGCGCCGGAGATTTTGAACTCCAAGAAGATAGTACCGACGGCTGCGGTGGCGGTGGCGGTGACGGTGGATTCTTCTTCTTCTCAAGGTCATACAAATAATGAATTATCTTCAAATTCAAAATCTAGGGTTTTTTCATGCAACTTTTGCAAGAGGGAATTTTCCACCTCCCAAGCCCTAGGAGGCCACCAAAATGCACACAAGCAAGAAAGAGCCATGGCCAAGCGCCGGCAAGGAATGGAACTCGGAAGCGGCGCCAATGTTGTCGGGCCACCGTACTTGTCGTCGTACTATAGTCCATATTCTACCCTCTCGCCTCATCCACTCTACGGATCGTCGCTCGGGAAATCGCTCGGAATACGGATGGATTCAATGATTCATAAACCATCGTATCGGTGGCTCGGGTCTCCCGCGCTACAGTTTCACGGCGGAGTAGATGGTGCTTGGGCTTCCCGGCCGGTGGTGGTGAATAGTAATAATAATAACAATTCAAAATTATTGGCGTTTGAAAGGCTAAAGATGGAGGGAATTCAAGCTCATAATGGTGGATTTCGATTGTCATCCGCGATCAATAATGCAACTGAATCAATGAGAAGATTTGAAGAAGATGGAACGATTTCGATACCGAATTTGAGTCGTTCTGAGCCGCCGGTGTTGAAGATGGATCATCATGTGGAAGAAAGCCATGAACTTGATTTATCACTCAAGCTTTAG

Coding sequence (CDS)

ATGGCTGAAACTGGAAAAGATAATCGAAATTGCCCTTCTGAAGCTTCTAGTATCTCCGCCACGTCCGACGGCGGACCGGTGAAGATGAAGATGGAGATGGTTGTTGCCGATGAAATCGACGGTGGTGATCGGCAGTCGGAGGAGTCGAACTCACGGTTGTTGTTGGATCTCAAGCTTTCTAACAATATTGAGAATTCCGGCAATGGCGCGCCGGAGATTTTGAACTCCAAGAAGATAGTACCGACGGCTGCGGTGGCGGTGGCGGTGACGGTGGATTCTTCTTCTTCTCAAGGTCATACAAATAATGAATTATCTTCAAATTCAAAATCTAGGGTTTTTTCATGCAACTTTTGCAAGAGGGAATTTTCCACCTCCCAAGCCCTAGGAGGCCACCAAAATGCACACAAGCAAGAAAGAGCCATGGCCAAGCGCCGGCAAGGAATGGAACTCGGAAGCGGCGCCAATGTTGTCGGGCCACCGTACTTGTCGTCGTACTATAGTCCATATTCTACCCTCTCGCCTCATCCACTCTACGGATCGTCGCTCGGGAAATCGCTCGGAATACGGATGGATTCAATGATTCATAAACCATCGTATCGGTGGCTCGGGTCTCCCGCGCTACAGTTTCACGGCGGAGTAGATGGTGCTTGGGCTTCCCGGCCGGTGGTGGTGAATAGTAATAATAATAACAATTCAAAATTATTGGCGTTTGAAAGGCTAAAGATGGAGGGAATTCAAGCTCATAATGGTGGATTTCGATTGTCATCCGCGATCAATAATGCAACTGAATCAATGAGAAGATTTGAAGAAGATGGAACGATTTCGATACCGAATTTGAGTCGTTCTGAGCCGCCGGTGTTGAAGATGGATCATCATGTGGAAGAAAGCCATGAACTTGATTTATCACTCAAGCTTTAG

Protein sequence

MAETGKDNRNCPSEASSISATSDGGPVKMKMEMVVADEIDGGDRQSEESNSRLLLDLKLSNNIENSGNGAPEILNSKKIVPTAAVAVAVTVDSSSSQGHTNNELSSNSKSRVFSCNFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGANVVGPPYLSSYYSPYSTLSPHPLYGSSLGKSLGIRMDSMIHKPSYRWLGSPALQFHGGVDGAWASRPVVVNSNNNNNSKLLAFERLKMEGIQAHNGGFRLSSAINNATESMRRFEEDGTISIPNLSRSEPPVLKMDHHVEESHELDLSLKL
Homology
[Close]
BLAST of Lsi04G007520 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.5e-14
Identity = 61/165 (36.97%), Postives = 85/165 (51.52%), Query Frame = 1 

Query: 93  SSSSQGHTNNELSSNSKSRVFSCNFCKREFSTSQALGGHQNAHKQERAMAKRRQGME--- 152
           SSSS  H  ++    +  RVFSCN+C+R+F +SQALGGHQNAHK+ER +AKR Q  +   
Sbjct: 48  SSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTL 107

Query: 153 --LGSGANVVGPPYLSSYYSPYSTLSPHPLYGSSLGKS-LGIRMDSMIHKPSYRWLGSPA 212
             L S A   G        S +++++  PL+GS   +S LGI+  S IHKPS+  LG   
Sbjct: 108 SSLPSSAFAFG----HGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPSF--LGRQT 167

Query: 213 LQFHGGVDGAWASRPVV-----------VNSNNNNNSKLLAFERL 241
                    +   +P +           V  NNN+N      ER+
Sbjct: 168 TSLSHVFKQSIHQKPTIGKMLPEKFHLEVAGNNNSNMVAAKLERI 206

[Close]
BLAST of Lsi04G007520 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.3e-13
Identity = 65/210 (30.95%), Postives = 104/210 (49.52%), Query Frame = 1 

Query: 102 NELSSNSKSRVFSCNFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGANVVGPPY 161
           NE +++++ ++FSCN+C+R F +SQALGGHQNAHK+ER +AKR  G  + + A+  G PY
Sbjct: 50  NESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKR--GQRMAASASAFGHPY 109

Query: 162 LSSYYSPYSTLSPHPLYGS-SLGKSLGIRMDSMIHK-PSYRWLGSPALQFHGGVDGAWAS 221
                      SP P +G  +  +SLGI+  S+ HK  SY   G      +G ++  W+ 
Sbjct: 110 ---------GFSPLPFHGQYNNHRSLGIQAHSISHKLSSYNGFGG----HYGQIN--WSR 169

Query: 222 RPVVVNSNNNNNSKLLAFERLKMEGIQAHNGGFRLSSAINNATESMRRFEEDGTI--SIP 281
            P            +  F          H+    ++ ++N+ + ++      G +    P
Sbjct: 170 LPFDQQPAIGKFPSMDNFH-------HHHHQMMMMAPSVNSRSNNIDSPSNTGRVLEGSP 229

Query: 282 NLSR--SEPPVLKMDHHVEESHELDLSLKL 306
            L +   +  +L    H EE  +LDLSLKL
Sbjct: 230 TLEQWHGDKGLLLSTSHHEEQQKLDLSLKL 235

[Close]
BLAST of Lsi04G007520 vs. Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 2.5e-12
Identity = 58/152 (38.16%), Postives = 80/152 (52.63%), Query Frame = 1 

Query: 55  LDLKLSNNIENSGNGAPEILNSKKIVPTAAVAVAVTVDSSSSQGHTNNELSSNSKSRVFS 114
           + L LS +  N+ N   ++ +S   +P ++        S SS      +   +   RVFS
Sbjct: 34  ISLNLSLSFNNNNNNNLDLESSSLTLPLSST-------SESSNPEQQQQQQPSVSKRVFS 93

Query: 115 CNFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGANVVGPPYLSSYYSPYST--- 174
           CN+C+R+F +SQALGGHQNAHK+ER +AKR   M L   A V      SS Y+  +T   
Sbjct: 94  CNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGL---AGVFPGRGSSSNYAAAATAAA 153

Query: 175 LSPHPLYGSSLG-----KSLGIRMDSMIHKPS 199
           LS  PL+GS  G     ++LGIR  S  H  S
Sbjct: 154 LSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVS 175

[Close]
BLAST of Lsi04G007520 vs. Swiss-Prot
Match: KNU_ARATH (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.0e-09
Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = 1 

Query: 94  SSSQGHTNNELSSNSKSRVFSCNFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSG 153
           SSS+ H+ +  +  +  R+F C +C R+F TSQALGGHQNAHK+ERA A+R  G+   S 
Sbjct: 19  SSSKRHSFSSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRNLGVLANS- 78

Query: 154 ANVVGPPYL---SSYYSPYSTLSPHPLYGSSLG 184
                PP L   +++  PY     +P  GS+ G
Sbjct: 79  -----PPILDDNNTFLRPYPCFYQNPFQGSTSG 105

[Close]
BLAST of Lsi04G007520 vs. Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.3e-08
Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 1 

Query: 111 RVFSCNFCKREFSTSQALGGHQNAHKQERAMAKRRQGM 149
           RVFSCN+C+R+F +SQALGGHQNAHK+ER MAKR   M
Sbjct: 57  RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHM 94

[Close]
BLAST of Lsi04G007520 vs. TrEMBL
Match: A0A0A0KT61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G583280 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.0e-121
Identity = 249/319 (78.06%), Postives = 268/319 (84.01%), Query Frame = 1 

Query: 1   MAETGKDNRNCPSEASSISATSDGG----PVK-MKMEMVVADEIDGGDRQSEESNSRLLL 60
           MAETGK+ +  PSEASSISATSDGG    P+  MKMEMVVA+EI   DRQS+ESNSRLLL
Sbjct: 1   MAETGKNKQTSPSEASSISATSDGGGSDRPLSTMKMEMVVAEEISSEDRQSQESNSRLLL 60

Query: 61  DLKLSNNIENSGNGAPEILNSKKIVPTAAVAVAVTVDSSSSQGHTNNELSSNSKSRVFSC 120
           DLKLSNN  +  NGA E +       T   A+    +SSSSQG+T NELSSNSK RVFSC
Sbjct: 61  DLKLSNNENSGNNGAAETV-------TPVPAMTAGNNSSSSQGYTTNELSSNSKGRVFSC 120

Query: 121 NFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGANVV-GPPYLSSYYSPYSTLSP 180
           NFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGANVV GP YL+SYYSPYS+LSP
Sbjct: 121 NFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGANVVAGPSYLASYYSPYSSLSP 180

Query: 181 HPLYGSSLGKSLGIRMDSMIHKP-SYRWLGSPALQFHGGVDGAWASRPVVVNS------N 240
           HPLYGSSLGKSLGIR+DSMIHKP SYRWLGSP LQFH GVDG WASRPV+VNS      N
Sbjct: 181 HPLYGSSLGKSLGIRVDSMIHKPSSYRWLGSPTLQFHAGVDGGWASRPVMVNSSSSNNNN 240

Query: 241 NNNNSKLLAFERLKMEGIQAHNGGFRLSSAINNATESMRRFEEDGTISIPNLSRSEPPVL 300
           NNNNSKLLAFERLKMEGIQAHNGGFRLS+AI NA ES RRFEEDGT SIP+L+RSEPPVL
Sbjct: 241 NNNNSKLLAFERLKMEGIQAHNGGFRLSTAI-NANESTRRFEEDGTTSIPSLNRSEPPVL 300

Query: 301 KMDHHVE-ESHELDLSLKL 306
           KMDHHVE ESHELDL+L+L
Sbjct: 301 KMDHHVETESHELDLTLRL 311

[Close]
BLAST of Lsi04G007520 vs. TrEMBL
Match: M5X448_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024870mg PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.8e-36
Identity = 142/355 (40.00%), Postives = 182/355 (51.27%), Query Frame = 1 

Query: 1   MAETGKDNR-NCPSEASSISATSDGGPV-----------KMKM---EMVVADEIDGGDRQ 60
           MAE  +  R +  SEAS+ISA SDG P            KMKM   E +V D+ D  D Q
Sbjct: 1   MAEESRVERLSSTSEASNISAASDGPPPTQKDGPENLDQKMKMKLKEKIVIDDSDDDDTQ 60

Query: 61  ----------------SEESNSRLLLDLKLSNNIENSGNGAPEILNSKKIVPTAAVAVAV 120
                           S   +SRL LDLKL N+    G+G+   L          +++  
Sbjct: 61  QPRQQPPPPPVVRSSSSPSPSSRLRLDLKLCNDNSARGSGSTSRLE---------LSLFN 120

Query: 121 TVDSSSSQGHTNNELSSNSKS---RVFSCNFCKREFSTSQALGGHQNAHKQERAMAKRRQ 180
           T +  SS   ++N +SS+ K    RVF+CNFCKREFSTSQALGGHQNAHKQERA+AKRRQ
Sbjct: 121 TSNPGSSNPGSSNPVSSDDKRSQPRVFTCNFCKREFSTSQALGGHQNAHKQERALAKRRQ 180

Query: 181 GMELGSGANVVGPPYLSSYYSPYSTLSPHPLYGSSLGKSLGIRMDSMIHKPSYRWLGSPA 240
           G     G  +   P+  SYY+PYS+ S   LYG S  +SLG+RMDSMIHKPSY W  +P 
Sbjct: 181 GGLENMGGVLGHSPF--SYYNPYSSFSSPSLYG-SFNRSLGVRMDSMIHKPSYPWSSTPG 240

Query: 241 LQFHGGVDGAWASRPVVVNSNNNNNSKLLAFERLKMEGIQAHNGGFRLSSAINNATESMR 300
               G   GAW+SR        N  S +   +RL +EG+ A+     L    +  T S  
Sbjct: 241 FGRFGHGSGAWSSR---AGGLLNFQSTI---DRLNLEGLHANAPSGILG---HPGTSSAP 300

Query: 301 RFEED--------GTIS--------IPNLSRSEPPVLKMDHHVEESHELDLSLKL 306
           RF+++        G+ S        + +L R EPP    D     +  LDLSLKL
Sbjct: 301 RFDQEISAVRNFGGSSSNFGINRPFLGDLIRREPPTSDTD-----AAGLDLSLKL 329

[Close]
BLAST of Lsi04G007520 vs. TrEMBL
Match: W9R0J0_9ROSA (Zinc finger protein 1 OS=Morus notabilis GN=L484_024006 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.4e-35
Identity = 132/328 (40.24%), Postives = 166/328 (50.61%), Query Frame = 1 

Query: 5   GKDNRNCPSEASSISATSDGGPVKMKMEMVVADEIDGGDRQSEESNSRLLLDLKLSNNIE 64
           G     CPSEASSISA SDG   K  M M +  +      Q   S+SRLLLDLKLSN  +
Sbjct: 4   GLGTEACPSEASSISAASDGDENKKMMIMKMKMKEPEVPEQVPGSSSRLLLDLKLSNG-K 63

Query: 65  NSGNGAPEILNSKKIVPTAAVAVAVTVDSSSSQGHTNNELSSNSKSRVFSCNFCKREFST 124
           + G    E+     + P + +   +   S             N ++RVFSCNFCKREFST
Sbjct: 64  SIGGSKLELNLFDTLSPGSGLKSNINEPSDEK----------NEQTRVFSCNFCKREFST 123

Query: 125 SQALGGHQNAHKQERAMAKRRQGMELGSGANVVGPPYLSSYYSPYSTLSP--HPLYGSSL 184
           SQALGGHQNAHKQERA+AKRRQG++LG+ ++   P     YY  YS+ SP    LYGS+ 
Sbjct: 124 SQALGGHQNAHKQERALAKRRQGIDLGALSSSHYP-----YYPYYSSFSPAHSNLYGSNF 183

Query: 185 GKSLGIRMDSMIHKP--SYRWLGSPALQFHGGVD----GAWASRPVVVNSNNNNNSKLLA 244
             SLG+RMDSMIHKP  +Y W GS    +  G +      W+ +   +NS+   +     
Sbjct: 184 RSSLGVRMDSMIHKPNSAYSWSGSATGGYRYGHEIAGTSTWSRQAAAMNSHRPID----- 243

Query: 245 FERLKMEGIQAHN--GGFRLSSAINNATESMRRFEEDG-----------------TISIP 304
             RL  +G QA N  GG  L   I     S  R EE+G                  I   
Sbjct: 244 -HRLSTDGFQARNIGGGLGLGGNITCGVTS-SRIEENGALRNNFGVSGTNVGVNPAIGGA 303

Query: 305 NLSRSEPPVLKMDHHVEESHELDLSLKL 306
           +L R     LK +H  +    LDLSLKL
Sbjct: 304 DLGRRGVEPLKKNHS-DAPAGLDLSLKL 307

[Close]
BLAST of Lsi04G007520 vs. TrEMBL
Match: A5B9E5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006325 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.1e-33
Identity = 127/298 (42.62%), Postives = 159/298 (53.36%), Query Frame = 1 

Query: 1   MAETGKDNRNCPSEASSISATSDGGPVK-------MKMEMVVADEIDGGDRQSEESNSRL 60
           M   G D++ CPSE SSISATS+G P K       +KM+  V++E      +  E+ S L
Sbjct: 176 MEALGVDHQ-CPSEGSSISATSEGTPTKDGERAKKVKMKGKVSEE-----ERKTETGSNL 235

Query: 61  LLDLKLSNNIENSGNGAPEILNSKKIVPTAAVAVAVTVDSSSSQGHTNNELSSNSKSRVF 120
           LLDL+LSN+            +SK       + +  ++ ++SS   T        + RVF
Sbjct: 236 LLDLRLSND------------DSK-----VDLNLCNSLRTASSPERTVMVREKQPERRVF 295

Query: 121 SCNFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGANVVGPPYLSSYYSPYSTLS 180
           SCNFCKREFSTSQALGGHQNAHKQERA+AKRRQGM++       G P+   Y  PYS++ 
Sbjct: 296 SCNFCKREFSTSQALGGHQNAHKQERAIAKRRQGMDMPG----FGHPHF-HYNYPYSSIP 355

Query: 181 PHPLYGSSLGKSLGIRMDSMIHKPSYRWLGS-----PALQF-HGGVDGAWASRPVVVNSN 240
           P PLYG S  +SLG+RMDSMIHKP Y W        P  +F HGG    W  RP      
Sbjct: 356 PVPLYG-SFNRSLGVRMDSMIHKPPYPWTPQPPPPPPGYRFGHGG----WL-RP------ 415

Query: 241 NNNNSKLLAFER--LKMEGIQAHNGGFRLSSAINNATESMRRFEE-DGTISIPNLSRS 283
            N  S   AFE   ++ E    H GG         +T    RFEE DG IS   +S S
Sbjct: 416 -NMMSPQSAFEHRIMRREDFHMHGGG-----VFGASTGPSSRFEESDGAISSLGVSNS 427

[Close]
BLAST of Lsi04G007520 vs. TrEMBL
Match: A0A061FQI6_THECC (C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao GN=TCM_044725 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 5.3e-33
Identity = 124/311 (39.87%), Postives = 162/311 (52.09%), Query Frame = 1 

Query: 11  CPSEASSISATSDGGPVKMKMEMVVADEIDGGDRQSEESNSRLLLDLKLSNNIENSGNGA 70
           CPSEASSISAT +G         V  ++++   + SE S   +LLDLKL ++        
Sbjct: 56  CPSEASSISATLEG---------VTPNKVNEAAKASESSLG-ILLDLKLFSD-------- 115

Query: 71  PEILNSKKIVPTAAVAVAVTVDSSSSQG--HTNNELSSNSKSRVFSCNFCKREFSTSQAL 130
            + L   KI       ++ T   S   G   T  E  S+  +RVFSCN+CKREFSTSQAL
Sbjct: 116 -DSLCKPKIELNLFNPMSPTSSHSKDSGDHQTLREKRSDDSNRVFSCNYCKREFSTSQAL 175

Query: 131 GGHQNAHKQERAMAKRRQGMELGSGANVVG-PPYLSSYYSPYSTLSPHPLYGSSLGKSLG 190
           GGHQNAHKQERA+AKRRQGM++    N  G PPY    Y+PYST+SPHP YGS     LG
Sbjct: 176 GGHQNAHKQERALAKRRQGMDV----NGFGFPPY---PYNPYSTISPHPFYGSLNRSPLG 235

Query: 191 IRMDSMIHKPSYRWLGSPALQFHGGVDGAWASRPVVVNSNNNNNSKLLAFERLKMEGIQA 250
           +R+DSMIHKPSY W         G     W+S+ ++       +      ERL M     
Sbjct: 236 VRLDSMIHKPSYPWTSIGGFHHLG---HGWSSQAILTPPRPTIS------ERLSM----- 295

Query: 251 HNGGFRLSSAINNATESMRRFEEDGT------ISIPNLSRSE-------PPVLKMDHHVE 306
           +NGGF +S        S  RF+E G       IS  N++ ++        P         
Sbjct: 296 NNGGFGIS-----GPSSSSRFQETGAPCSFSDISQANVATNKAARSDYLQPSNPSGSDNN 321

[Close]
BLAST of Lsi04G007520 vs. TAIR10
Match: AT1G80730.1 (AT1G80730.1 zinc-finger protein 1)

HSP 1 Score: 80.5 bits (197), Expect = 2.0e-15
Identity = 61/165 (36.97%), Postives = 85/165 (51.52%), Query Frame = 1 

Query: 93  SSSSQGHTNNELSSNSKSRVFSCNFCKREFSTSQALGGHQNAHKQERAMAKRRQGME--- 152
           SSSS  H  ++    +  RVFSCN+C+R+F +SQALGGHQNAHK+ER +AKR Q  +   
Sbjct: 48  SSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTL 107

Query: 153 --LGSGANVVGPPYLSSYYSPYSTLSPHPLYGSSLGKS-LGIRMDSMIHKPSYRWLGSPA 212
             L S A   G        S +++++  PL+GS   +S LGI+  S IHKPS+  LG   
Sbjct: 108 SSLPSSAFAFG----HGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPSF--LGRQT 167

Query: 213 LQFHGGVDGAWASRPVV-----------VNSNNNNNSKLLAFERL 241
                    +   +P +           V  NNN+N      ER+
Sbjct: 168 TSLSHVFKQSIHQKPTIGKMLPEKFHLEVAGNNNSNMVAAKLERI 206

[Close]
BLAST of Lsi04G007520 vs. TAIR10
Match: AT5G25160.1 (AT5G25160.1 zinc finger protein 3)

HSP 1 Score: 78.6 bits (192), Expect = 7.6e-15
Identity = 65/210 (30.95%), Postives = 104/210 (49.52%), Query Frame = 1 

Query: 102 NELSSNSKSRVFSCNFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGANVVGPPY 161
           NE +++++ ++FSCN+C+R F +SQALGGHQNAHK+ER +AKR  G  + + A+  G PY
Sbjct: 50  NESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKR--GQRMAASASAFGHPY 109

Query: 162 LSSYYSPYSTLSPHPLYGS-SLGKSLGIRMDSMIHK-PSYRWLGSPALQFHGGVDGAWAS 221
                      SP P +G  +  +SLGI+  S+ HK  SY   G      +G ++  W+ 
Sbjct: 110 ---------GFSPLPFHGQYNNHRSLGIQAHSISHKLSSYNGFGG----HYGQIN--WSR 169

Query: 222 RPVVVNSNNNNNSKLLAFERLKMEGIQAHNGGFRLSSAINNATESMRRFEEDGTI--SIP 281
            P            +  F          H+    ++ ++N+ + ++      G +    P
Sbjct: 170 LPFDQQPAIGKFPSMDNFH-------HHHHQMMMMAPSVNSRSNNIDSPSNTGRVLEGSP 229

Query: 282 NLSR--SEPPVLKMDHHVEESHELDLSLKL 306
            L +   +  +L    H EE  +LDLSLKL
Sbjct: 230 TLEQWHGDKGLLLSTSHHEEQQKLDLSLKL 235

[Close]
BLAST of Lsi04G007520 vs. TAIR10
Match: AT5G10970.1 (AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 76.3 bits (186), Expect = 3.8e-14
Identity = 90/305 (29.51%), Postives = 137/305 (44.92%), Query Frame = 1 

Query: 10  NCPSEASSISATSDGGPVKMK---MEMVVADEIDGGDRQSEESNSRLLLDLKLSNNIENS 69
           +C   AS+    SD   + ++   ++ V A E D  D   +E    + LDL L+   ++S
Sbjct: 14  SCIISASTSLQFSDSPKLSLENYNIDTVAAQEED--DHDQKEGVEGIKLDLMLAG-YDSS 73

Query: 70  GNGAPEILNSKKIVPTAAVAVAVTVDSSSSQGHTNNELSSNSKSRVFSCNFCKREFSTSQ 129
                + LN    + T  V       + S  G T+ E       ++FSCN+C+R F +SQ
Sbjct: 74  QPQLNQELNLLDCLETGVV-------TPSFNGSTSTE------QKLFSCNYCQRTFYSSQ 133

Query: 130 ALGGHQNAHKQERAMAKRRQGMELGSGANVVGPPYLSSYYSPYSTLSPHPLYGSSLGKSL 189
           ALGGHQNAHK+ER +AKR Q M   + A   G PY           +P P +G    ++L
Sbjct: 134 ALGGHQNAHKRERTLAKRGQRM---ASAAAFGHPY---------GFAPVPFHGQYSNRTL 193

Query: 190 GIRMDSMIHKPSYRWLGSPALQFHGGVDGA--WASRPVVVNSNNNNNSKLLAFERLKMEG 249
           GI+  SM HKPS       +   +GG  G   W+  P+V            A  +L    
Sbjct: 194 GIQAHSMSHKPS-------SYNVYGGEYGQINWSRIPLVQQP---------AIAKLTSTE 253

Query: 250 IQAHNGGFRLSSAINNATESMRRFEEDGTISI----PNLSRSEPPVLKMDHHVEESHELD 306
              ++    ++  + +  E++ RF+  G I +      L +    +LK     E+   LD
Sbjct: 254 NHYNHHQMMIAPPLTSTCENIGRFDV-GRIPVEFPTSELWQRGEELLKPAEE-EKQKNLD 272

[Close]
BLAST of Lsi04G007520 vs. TAIR10
Match: AT1G66140.1 (AT1G66140.1 zinc finger protein 4)

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-13
Identity = 58/152 (38.16%), Postives = 80/152 (52.63%), Query Frame = 1 

Query: 55  LDLKLSNNIENSGNGAPEILNSKKIVPTAAVAVAVTVDSSSSQGHTNNELSSNSKSRVFS 114
           + L LS +  N+ N   ++ +S   +P ++        S SS      +   +   RVFS
Sbjct: 34  ISLNLSLSFNNNNNNNLDLESSSLTLPLSST-------SESSNPEQQQQQQPSVSKRVFS 93

Query: 115 CNFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGANVVGPPYLSSYYSPYST--- 174
           CN+C+R+F +SQALGGHQNAHK+ER +AKR   M L   A V      SS Y+  +T   
Sbjct: 94  CNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGL---AGVFPGRGSSSNYAAAATAAA 153

Query: 175 LSPHPLYGSSLG-----KSLGIRMDSMIHKPS 199
           LS  PL+GS  G     ++LGIR  S  H  S
Sbjct: 154 LSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVS 175

[Close]
BLAST of Lsi04G007520 vs. TAIR10
Match: AT5G01860.1 (AT5G01860.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 1.9e-13
Identity = 50/102 (49.02%), Postives = 63/102 (61.76%), Query Frame = 1 

Query: 96  SQGHTNNELSSNSKSRVFSCNFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGAN 155
           ++  T NE    +K+RVF+C FCK+EFSTSQALGGHQNAHKQER++AKRR+ +E      
Sbjct: 54  NESSTRNE----AKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRRKEIE------ 113

Query: 156 VVGPPYLSSYYS-PYSTLSPHPLYGSSLGKSLGIRMDSMIHK 197
            +  P LS Y   P S LS      SS    LG+R +  I K
Sbjct: 114 -INYPELSIYSQYPPSGLS---FSSSSSQYDLGVRYNPNIAK 141

[Close]
BLAST of Lsi04G007520 vs. NCBI nr
Match: gi|659092286|ref|XP_008446993.1| (PREDICTED: zinc finger protein 1-like [Cucumis melo])

HSP 1 Score: 444.9 bits (1143), Expect = 1.1e-121
Identity = 252/318 (79.25%), Postives = 266/318 (83.65%), Query Frame = 1 

Query: 1   MAETGKDNRNCPSEASSISATSDGGP------VKMKMEMVVA-DEIDGGDRQSEESNSRL 60
           MAETGK  +N PSEASSISATSDGG         MKMEMVVA DEI   DRQS+ESNSRL
Sbjct: 1   MAETGKSKQNSPSEASSISATSDGGGSSDRPMATMKMEMVVATDEISSEDRQSQESNSRL 60

Query: 61  LLDLKLSNNIENSGNGAPEILNSKKIVPTAAVAVAVTVDSSSSQGHTNNELSSNSKSRVF 120
           LLDLKLSNN  NSGNG      + +   T   A     +SSSSQGHT+NELSSNSK RVF
Sbjct: 61  LLDLKLSNNENNSGNGT-----AAERTMTPVPATTAGNNSSSSQGHTSNELSSNSKGRVF 120

Query: 121 SCNFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGANVV-GPPYLSSYYSPYSTL 180
           SCNFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGANVV GP YL+SYYSPYS+L
Sbjct: 121 SCNFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGANVVAGPSYLASYYSPYSSL 180

Query: 181 SPHPLYGSSLGKSLGIRMDSMIHKP-SYRWLGSPALQFHGGVDGAWASRPVVV--NSNNN 240
           SPHPLYGSSLGKSLGIRMDSMIHKP SYRWLGSP LQFH GVDG WASRPV+V  N+NNN
Sbjct: 181 SPHPLYGSSLGKSLGIRMDSMIHKPSSYRWLGSPTLQFHAGVDGGWASRPVIVNTNNNNN 240

Query: 241 NNSKLLAFERLKMEGIQAHNGGFRLSSAINNATESMRRFEEDGTISIPNLSR-SEPPVLK 300
           NNSKLL FERLKMEGIQAHNGGFRLS+AI NA ES RRFEEDGTISIP+L R SEPPVLK
Sbjct: 241 NNSKLLTFERLKMEGIQAHNGGFRLSTAI-NANESTRRFEEDGTISIPSLDRNSEPPVLK 300

Query: 301 MDHHVE-ESHELDLSLKL 306
           MDHHVE E+HELDL+LKL
Sbjct: 301 MDHHVETENHELDLTLKL 312

[Close]
BLAST of Lsi04G007520 vs. NCBI nr
Match: gi|778708625|ref|XP_011656249.1| (PREDICTED: zinc finger protein 3-like [Cucumis sativus])

HSP 1 Score: 444.5 bits (1142), Expect = 1.5e-121
Identity = 249/319 (78.06%), Postives = 268/319 (84.01%), Query Frame = 1 

Query: 1   MAETGKDNRNCPSEASSISATSDGG----PVK-MKMEMVVADEIDGGDRQSEESNSRLLL 60
           MAETGK+ +  PSEASSISATSDGG    P+  MKMEMVVA+EI   DRQS+ESNSRLLL
Sbjct: 1   MAETGKNKQTSPSEASSISATSDGGGSDRPLSTMKMEMVVAEEISSEDRQSQESNSRLLL 60

Query: 61  DLKLSNNIENSGNGAPEILNSKKIVPTAAVAVAVTVDSSSSQGHTNNELSSNSKSRVFSC 120
           DLKLSNN  +  NGA E +       T   A+    +SSSSQG+T NELSSNSK RVFSC
Sbjct: 61  DLKLSNNENSGNNGAAETV-------TPVPAMTAGNNSSSSQGYTTNELSSNSKGRVFSC 120

Query: 121 NFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGANVV-GPPYLSSYYSPYSTLSP 180
           NFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGANVV GP YL+SYYSPYS+LSP
Sbjct: 121 NFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGANVVAGPSYLASYYSPYSSLSP 180

Query: 181 HPLYGSSLGKSLGIRMDSMIHKP-SYRWLGSPALQFHGGVDGAWASRPVVVNS------N 240
           HPLYGSSLGKSLGIR+DSMIHKP SYRWLGSP LQFH GVDG WASRPV+VNS      N
Sbjct: 181 HPLYGSSLGKSLGIRVDSMIHKPSSYRWLGSPTLQFHAGVDGGWASRPVMVNSSSSNNNN 240

Query: 241 NNNNSKLLAFERLKMEGIQAHNGGFRLSSAINNATESMRRFEEDGTISIPNLSRSEPPVL 300
           NNNNSKLLAFERLKMEGIQAHNGGFRLS+AI NA ES RRFEEDGT SIP+L+RSEPPVL
Sbjct: 241 NNNNSKLLAFERLKMEGIQAHNGGFRLSTAI-NANESTRRFEEDGTTSIPSLNRSEPPVL 300

Query: 301 KMDHHVE-ESHELDLSLKL 306
           KMDHHVE ESHELDL+L+L
Sbjct: 301 KMDHHVETESHELDLTLRL 311

[Close]
BLAST of Lsi04G007520 vs. NCBI nr
Match: gi|1009118903|ref|XP_015876096.1| (PREDICTED: zinc finger protein 3-like [Ziziphus jujuba])

HSP 1 Score: 162.9 bits (411), Expect = 8.7e-37
Identity = 130/333 (39.04%), Postives = 181/333 (54.35%), Query Frame = 1 

Query: 1   MAETGKDNRNCPSEASSISATSDG----------------GPVKMKMEMVVADEIDGGDR 60
           M E G     CPSEASSISA SDG                  +K+K +++V    D  DR
Sbjct: 1   MEEIG-GGETCPSEASSISAASDGTTTPCQNHHAHNKKIMNNMKLKEKLLVKSSSDINDR 60

Query: 61  ---QSEESNSRLLLDLKLSNNIENSGNGAPEILNSKKIVPTAAVAVAVTVDSSSSQGHTN 120
              Q+ E +SR+LLDLKL N+    G  + ++           + +  ++++     H N
Sbjct: 61  VERQNPELSSRVLLDLKLCNDESLRGGSSSKL----------ELNLFNSMNNQHVSSHAN 120

Query: 121 NELSSN-------SKSRVFSCNFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGA 180
           N  SS+       S+SRVFSCNFCKREFSTSQALGGHQNAHKQERA+AKRRQGM++G+  
Sbjct: 121 NNESSDETTREKRSESRVFSCNFCKREFSTSQALGGHQNAHKQERALAKRRQGMDVGA-- 180

Query: 181 NVVGPPYLSSYYSPYSTLSPHPLYGSSLGKSLGIRMDSMIHKP-SYRWLGSPALQFHG-- 240
              G P+    Y PYS++S HPL+G S  +S+G+RM+SMIHKP +Y+W      +F+   
Sbjct: 181 --FGHPHFP--YYPYSSISSHPLFG-SFNRSIGVRMESMIHKPNAYQWPTQAGYRFNNHS 240

Query: 241 ------GVDGAWASRPVVVNSNNNNNSKLLAFERLKMEGIQAH---NGGFRL--SSAINN 294
                 GV G    R  ++N          + +RL +EG Q +    GG  L  +SA NN
Sbjct: 241 GGGVGVGVGGVGWGRQAIMNPQP-------SIDRLTLEGFQNNQIGGGGLGLAGTSASNN 300

[Close]
BLAST of Lsi04G007520 vs. NCBI nr
Match: gi|596035123|ref|XP_007219628.1| (hypothetical protein PRUPE_ppa024870mg [Prunus persica])

HSP 1 Score: 161.4 bits (407), Expect = 2.5e-36
Identity = 142/355 (40.00%), Postives = 182/355 (51.27%), Query Frame = 1 

Query: 1   MAETGKDNR-NCPSEASSISATSDGGPV-----------KMKM---EMVVADEIDGGDRQ 60
           MAE  +  R +  SEAS+ISA SDG P            KMKM   E +V D+ D  D Q
Sbjct: 1   MAEESRVERLSSTSEASNISAASDGPPPTQKDGPENLDQKMKMKLKEKIVIDDSDDDDTQ 60

Query: 61  ----------------SEESNSRLLLDLKLSNNIENSGNGAPEILNSKKIVPTAAVAVAV 120
                           S   +SRL LDLKL N+    G+G+   L          +++  
Sbjct: 61  QPRQQPPPPPVVRSSSSPSPSSRLRLDLKLCNDNSARGSGSTSRLE---------LSLFN 120

Query: 121 TVDSSSSQGHTNNELSSNSKS---RVFSCNFCKREFSTSQALGGHQNAHKQERAMAKRRQ 180
           T +  SS   ++N +SS+ K    RVF+CNFCKREFSTSQALGGHQNAHKQERA+AKRRQ
Sbjct: 121 TSNPGSSNPGSSNPVSSDDKRSQPRVFTCNFCKREFSTSQALGGHQNAHKQERALAKRRQ 180

Query: 181 GMELGSGANVVGPPYLSSYYSPYSTLSPHPLYGSSLGKSLGIRMDSMIHKPSYRWLGSPA 240
           G     G  +   P+  SYY+PYS+ S   LYG S  +SLG+RMDSMIHKPSY W  +P 
Sbjct: 181 GGLENMGGVLGHSPF--SYYNPYSSFSSPSLYG-SFNRSLGVRMDSMIHKPSYPWSSTPG 240

Query: 241 LQFHGGVDGAWASRPVVVNSNNNNNSKLLAFERLKMEGIQAHNGGFRLSSAINNATESMR 300
               G   GAW+SR        N  S +   +RL +EG+ A+     L    +  T S  
Sbjct: 241 FGRFGHGSGAWSSR---AGGLLNFQSTI---DRLNLEGLHANAPSGILG---HPGTSSAP 300

Query: 301 RFEED--------GTIS--------IPNLSRSEPPVLKMDHHVEESHELDLSLKL 306
           RF+++        G+ S        + +L R EPP    D     +  LDLSLKL
Sbjct: 301 RFDQEISAVRNFGGSSSNFGINRPFLGDLIRREPPTSDTD-----AAGLDLSLKL 329

[Close]
BLAST of Lsi04G007520 vs. NCBI nr
Match: gi|703097065|ref|XP_010096015.1| (Zinc finger protein 1 [Morus notabilis])

HSP 1 Score: 156.0 bits (393), Expect = 1.1e-34
Identity = 132/328 (40.24%), Postives = 166/328 (50.61%), Query Frame = 1 

Query: 5   GKDNRNCPSEASSISATSDGGPVKMKMEMVVADEIDGGDRQSEESNSRLLLDLKLSNNIE 64
           G     CPSEASSISA SDG   K  M M +  +      Q   S+SRLLLDLKLSN  +
Sbjct: 4   GLGTEACPSEASSISAASDGDENKKMMIMKMKMKEPEVPEQVPGSSSRLLLDLKLSNG-K 63

Query: 65  NSGNGAPEILNSKKIVPTAAVAVAVTVDSSSSQGHTNNELSSNSKSRVFSCNFCKREFST 124
           + G    E+     + P + +   +   S             N ++RVFSCNFCKREFST
Sbjct: 64  SIGGSKLELNLFDTLSPGSGLKSNINEPSDEK----------NEQTRVFSCNFCKREFST 123

Query: 125 SQALGGHQNAHKQERAMAKRRQGMELGSGANVVGPPYLSSYYSPYSTLSP--HPLYGSSL 184
           SQALGGHQNAHKQERA+AKRRQG++LG+ ++   P     YY  YS+ SP    LYGS+ 
Sbjct: 124 SQALGGHQNAHKQERALAKRRQGIDLGALSSSHYP-----YYPYYSSFSPAHSNLYGSNF 183

Query: 185 GKSLGIRMDSMIHKP--SYRWLGSPALQFHGGVD----GAWASRPVVVNSNNNNNSKLLA 244
             SLG+RMDSMIHKP  +Y W GS    +  G +      W+ +   +NS+   +     
Sbjct: 184 RSSLGVRMDSMIHKPNSAYSWSGSATGGYRYGHEIAGTSTWSRQAAAMNSHRPID----- 243

Query: 245 FERLKMEGIQAHN--GGFRLSSAINNATESMRRFEEDG-----------------TISIP 304
             RL  +G QA N  GG  L   I     S  R EE+G                  I   
Sbjct: 244 -HRLSTDGFQARNIGGGLGLGGNITCGVTS-SRIEENGALRNNFGVSGTNVGVNPAIGGA 303

Query: 305 NLSRSEPPVLKMDHHVEESHELDLSLKL 306
           +L R     LK +H  +    LDLSLKL
Sbjct: 304 DLGRRGVEPLKKNHS-DAPAGLDLSLKL 307

The following BLAST results are available for this feature:
BLAST of Lsi04G007520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZFP1_ARATH3.5e-1436.97Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1[more]
ZFP3_ARATH1.3e-1330.95Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1[more]
ZFP4_ARATH2.5e-1238.16Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2[more]
KNU_ARATH2.0e-0941.94Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1[more]
ZFP7_ARATH1.3e-0873.68Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1[more]
BLAST of Lsi04G007520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KT61_CUCSA1.0e-12178.06Uncharacterized protein OS=Cucumis sativus GN=Csa_5G583280 PE=4 SV=1[more]
M5X448_PRUPE1.8e-3640.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024870mg PE=4 SV=1[more]
W9R0J0_9ROSA7.4e-3540.24Zinc finger protein 1 OS=Morus notabilis GN=L484_024006 PE=4 SV=1[more]
A5B9E5_VITVI3.1e-3342.62Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006325 PE=4 SV=1[more]
A0A061FQI6_THECC5.3e-3339.87C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao GN=T... [more]
BLAST of Lsi04G007520 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80730.12.0e-1536.97 zinc-finger protein 1[more]
AT5G25160.17.6e-1530.95 zinc finger protein 3[more]
AT5G10970.13.8e-1429.51 C2H2 and C2HC zinc fingers superfamily protein[more]
AT1G66140.11.4e-1338.16 zinc finger protein 4[more]
AT5G01860.11.9e-1349.02 C2H2 and C2HC zinc fingers superfamily protein[more]
BLAST of Lsi04G007520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659092286|ref|XP_008446993.1|1.1e-12179.25PREDICTED: zinc finger protein 1-like [Cucumis melo][more]
gi|778708625|ref|XP_011656249.1|1.5e-12178.06PREDICTED: zinc finger protein 3-like [Cucumis sativus][more]
gi|1009118903|ref|XP_015876096.1|8.7e-3739.04PREDICTED: zinc finger protein 3-like [Ziziphus jujuba][more]
gi|596035123|ref|XP_007219628.1|2.5e-3640.00hypothetical protein PRUPE_ppa024870mg [Prunus persica][more]
gi|703097065|ref|XP_010096015.1|1.1e-3440.24Zinc finger protein 1 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR007087Zinc finger, C2H2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G007520.1Lsi04G007520.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 115..135
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 113..140
score: 11
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 106..139
score: 3.
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 110..140
score: 2.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi04G007520Csa5G583280Cucumber (Chinese Long) v2culsiB368
Lsi04G007520CSPI05G20680Wild cucumber (PI 183967)cpilsiB372
Lsi04G007520Cucsa.076450Cucumber (Gy14) v1cgylsiB076
Lsi04G007520CmaCh04G012920Cucurbita maxima (Rimu)cmalsiB676
Lsi04G007520CmoCh18G008370Cucurbita moschata (Rifu)cmolsiB366
Lsi04G007520CmoCh04G013600Cucurbita moschata (Rifu)cmolsiB669
Lsi04G007520Cla022901Watermelon (97103) v1lsiwmB339
Lsi04G007520MELO3C011792Melon (DHL92) v3.5.1lsimeB281
Lsi04G007520ClCG11G012970Watermelon (Charleston Gray)lsiwcgB264
Lsi04G007520MELO3C011792.2Melon (DHL92) v3.6.1lsimedB297
Lsi04G007520Cla97C11G218870Watermelon (97103) v2lsiwmbB271
Lsi04G007520Bhi07G000959Wax gourdlsiwgoB391
Lsi04G007520Cp4.1LG01g09830Cucurbita pepo (Zucchini)cpelsiB358
Lsi04G007520Cp4.1LG09g04720Cucurbita pepo (Zucchini)cpelsiB033
Lsi04G007520CsGy5G020180Cucumber (Gy14) v2cgyblsiB337
Lsi04G007520Carg14433Silver-seed gourdcarlsiB663
Lsi04G007520CsaV3_5G029450Cucumber (Chinese Long) v3cuclsiB393
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G007520Silver-seed gourdcarlsiB662
Lsi04G007520Silver-seed gourdcarlsiB765
Lsi04G007520Cucurbita maxima (Rimu)cmalsiB380
Lsi04G007520Cucurbita maxima (Rimu)cmalsiB384
Lsi04G007520Cucurbita maxima (Rimu)cmalsiB670
Lsi04G007520Cucurbita moschata (Rifu)cmolsiB369
Lsi04G007520Cucurbita moschata (Rifu)cmolsiB661
Lsi04G007520Cucurbita pepo (Zucchini)cpelsiB031