CsGy5G020180 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGAAACTGGAAAAAATAAACAAACTTCCCCTTCTGAAGCTTCAAGTATCTCGGCTACATCGGACGGCGGTGGCAGCGACAGACCATTGTCGACGATGAAGATGGAGATGGTTGTTGCCGAAGAAATCAGCAGTGAGGATCGACAGTCGCAGGAGTCGAACTCACGGCTGTTGTTGGATCTCAAGCTATCTAACAATGAGAATTCTGGTAATAATGGCGCGGCGGAGACGGTGACACCGGTACCGGCAATGACAGCGGGGAATAATTCATCTTCTTCTCAAGGTTATACAACAAATGAATTATCTTCAAATTCAAAAGGTAGGGTTTTTTCATGCAACTTTTGCAAGAGGGAATTTTCCACCTCTCAAGCTCTAGGAGGCCACCAAAATGCACATAAGCAAGAAAGAGCCATGGCCAAGCGCCGCCAAGGAATGGAACTCGGTAGCGGTGCCAATGTCGTTGCTGGGCCATCGTACTTGGCGTCGTACTACAGTCCATATTCCTCCCTCTCGCCTCATCCACTCTACGGATCGTCGCTTGGGAAATCGCTTGGTATACGAGTGGATTCAATGATTCACAAACCGTCTTCGTATCGGTGGCTGGGGTCTCCTACGCTACAGTTTCACGCTGGAGTCGACGGTGGTTGGGCTTCTCGGCCGGTGATGGTGAATAGTAGTAGCAGTAATAATAATAATAACAATAACAATTCAAAGTTATTGGCATTTGAAAGACTAAAGATGGAGGGAATTCAAGCTCACAACGGTGGGTTTCGATTGTCAACTGCTATAAATGCAAATGAATCAACGAGAAGATTTGAAGAAGATGGGACGACTTCGATACCGAGTCTGAATCGTTCCGAGCCACCGGTGTTGAAGATGGATCATCATGTGGAAACAGAAAGCCATGAACTTGATTTAACACTAAGGCTTTAA ATGGCTGAAACTGGAAAAAATAAACAAACTTCCCCTTCTGAAGCTTCAAGTATCTCGGCTACATCGGACGGCGGTGGCAGCGACAGACCATTGTCGACGATGAAGATGGAGATGGTTGTTGCCGAAGAAATCAGCAGTGAGGATCGACAGTCGCAGGAGTCGAACTCACGGCTGTTGTTGGATCTCAAGCTATCTAACAATGAGAATTCTGGTAATAATGGCGCGGCGGAGACGGTGACACCGGTACCGGCAATGACAGCGGGGAATAATTCATCTTCTTCTCAAGGTTATACAACAAATGAATTATCTTCAAATTCAAAAGGTAGGGTTTTTTCATGCAACTTTTGCAAGAGGGAATTTTCCACCTCTCAAGCTCTAGGAGGCCACCAAAATGCACATAAGCAAGAAAGAGCCATGGCCAAGCGCCGCCAAGGAATGGAACTCGGTAGCGGTGCCAATGTCGTTGCTGGGCCATCGTACTTGGCGTCGTACTACAGTCCATATTCCTCCCTCTCGCCTCATCCACTCTACGGATCGTCGCTTGGGAAATCGCTTGGTATACGAGTGGATTCAATGATTCACAAACCGTCTTCGTATCGGTGGCTGGGGTCTCCTACGCTACAGTTTCACGCTGGAGTCGACGGTGGTTGGGCTTCTCGGCCGGTGATGGTGAATAGTAGTAGCAGTAATAATAATAATAACAATAACAATTCAAAGTTATTGGCATTTGAAAGACTAAAGATGGAGGGAATTCAAGCTCACAACGGTGGGTTTCGATTGTCAACTGCTATAAATGCAAATGAATCAACGAGAAGATTTGAAGAAGATGGGACGACTTCGATACCGAGTCTGAATCGTTCCGAGCCACCGGTGTTGAAGATGGATCATCATGTGGAAACAGAAAGCCATGAACTTGATTTAACACTAAGGCTTTAA ATGGCTGAAACTGGAAAAAATAAACAAACTTCCCCTTCTGAAGCTTCAAGTATCTCGGCTACATCGGACGGCGGTGGCAGCGACAGACCATTGTCGACGATGAAGATGGAGATGGTTGTTGCCGAAGAAATCAGCAGTGAGGATCGACAGTCGCAGGAGTCGAACTCACGGCTGTTGTTGGATCTCAAGCTATCTAACAATGAGAATTCTGGTAATAATGGCGCGGCGGAGACGGTGACACCGGTACCGGCAATGACAGCGGGGAATAATTCATCTTCTTCTCAAGGTTATACAACAAATGAATTATCTTCAAATTCAAAAGGTAGGGTTTTTTCATGCAACTTTTGCAAGAGGGAATTTTCCACCTCTCAAGCTCTAGGAGGCCACCAAAATGCACATAAGCAAGAAAGAGCCATGGCCAAGCGCCGCCAAGGAATGGAACTCGGTAGCGGTGCCAATGTCGTTGCTGGGCCATCGTACTTGGCGTCGTACTACAGTCCATATTCCTCCCTCTCGCCTCATCCACTCTACGGATCGTCGCTTGGGAAATCGCTTGGTATACGAGTGGATTCAATGATTCACAAACCGTCTTCGTATCGGTGGCTGGGGTCTCCTACGCTACAGTTTCACGCTGGAGTCGACGGTGGTTGGGCTTCTCGGCCGGTGATGGTGAATAGTAGTAGCAGTAATAATAATAATAACAATAACAATTCAAAGTTATTGGCATTTGAAAGACTAAAGATGGAGGGAATTCAAGCTCACAACGGTGGGTTTCGATTGTCAACTGCTATAAATGCAAATGAATCAACGAGAAGATTTGAAGAAGATGGGACGACTTCGATACCGAGTCTGAATCGTTCCGAGCCACCGGTGTTGAAGATGGATCATCATGTGGAAACAGAAAGCCATGAACTTGATTTAACACTAAGGCTTTAA MAETGKNKQTSPSEASSISATSDGGGSDRPLSTMKMEMVVAEEISSEDRQSQESNSRLLLDLKLSNNENSGNNGAAETVTPVPAMTAGNNSSSSQGYTTNELSSNSKGRVFSCNFCKREFSTSQALGGHQNAHKQERAMAKRRQGMELGSGANVVAGPSYLASYYSPYSSLSPHPLYGSSLGKSLGIRVDSMIHKPSSYRWLGSPTLQFHAGVDGGWASRPVMVNSSSSNNNNNNNNSKLLAFERLKMEGIQAHNGGFRLSTAINANESTRRFEEDGTTSIPSLNRSEPPVLKMDHHVETESHELDLTLRL
BLAST of CsGy5G020180 vs. NCBI nr
Match: XP_011656249.1 (PREDICTED: zinc finger protein 3-like [Cucumis sativus] >KGN51597.1 hypothetical protein Csa_5G583280 [Cucumis sativus]) HSP 1 Score: 557.8 bits (1436), Expect = 2.4e-155 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
BLAST of CsGy5G020180 vs. NCBI nr
Match: XP_008446993.1 (PREDICTED: zinc finger protein 1-like [Cucumis melo]) HSP 1 Score: 399.4 bits (1025), Expect = 1.1e-107 Identity = 243/316 (76.90%), Postives = 254/316 (80.38%), Query Frame = 0
BLAST of CsGy5G020180 vs. NCBI nr
Match: XP_022990350.1 (zinc finger protein GIS-like [Cucurbita maxima]) HSP 1 Score: 362.1 bits (928), Expect = 1.9e-96 Identity = 218/318 (68.55%), Postives = 235/318 (73.90%), Query Frame = 0
BLAST of CsGy5G020180 vs. NCBI nr
Match: XP_023549223.1 (zinc finger protein 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 361.7 bits (927), Expect = 2.5e-96 Identity = 221/316 (69.94%), Postives = 235/316 (74.37%), Query Frame = 0
BLAST of CsGy5G020180 vs. NCBI nr
Match: XP_022957257.1 (zinc finger protein 3-like [Cucurbita moschata]) HSP 1 Score: 342.8 bits (878), Expect = 1.2e-90 Identity = 209/311 (67.20%), Postives = 226/311 (72.67%), Query Frame = 0
BLAST of CsGy5G020180 vs. TAIR10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein) HSP 1 Score: 78.2 bits (191), Expect = 1.0e-14 Identity = 68/204 (33.33%), Postives = 103/204 (50.49%), Query Frame = 0
BLAST of CsGy5G020180 vs. TAIR10
Match: AT1G80730.1 (zinc-finger protein 1) HSP 1 Score: 77.8 bits (190), Expect = 1.3e-14 Identity = 43/90 (47.78%), Postives = 62/90 (68.89%), Query Frame = 0
BLAST of CsGy5G020180 vs. TAIR10
Match: AT5G25160.1 (zinc finger protein 3) HSP 1 Score: 76.6 bits (187), Expect = 2.9e-14 Identity = 46/105 (43.81%), Postives = 65/105 (61.90%), Query Frame = 0
BLAST of CsGy5G020180 vs. TAIR10
Match: AT1G66140.1 (zinc finger protein 4) HSP 1 Score: 72.8 bits (177), Expect = 4.2e-13 Identity = 47/99 (47.47%), Postives = 61/99 (61.62%), Query Frame = 0
BLAST of CsGy5G020180 vs. TAIR10
Match: AT5G01860.1 (C2H2 and C2HC zinc fingers superfamily protein) HSP 1 Score: 71.6 bits (174), Expect = 9.4e-13 Identity = 44/104 (42.31%), Postives = 58/104 (55.77%), Query Frame = 0
BLAST of CsGy5G020180 vs. Swiss-Prot
Match: sp|Q42485|ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.4e-13 Identity = 43/90 (47.78%), Postives = 62/90 (68.89%), Query Frame = 0
BLAST of CsGy5G020180 vs. Swiss-Prot
Match: sp|Q39262|ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 5.3e-13 Identity = 46/105 (43.81%), Postives = 65/105 (61.90%), Query Frame = 0
BLAST of CsGy5G020180 vs. Swiss-Prot
Match: sp|Q39263|ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2) HSP 1 Score: 72.8 bits (177), Expect = 7.6e-12 Identity = 47/99 (47.47%), Postives = 61/99 (61.62%), Query Frame = 0
BLAST of CsGy5G020180 vs. Swiss-Prot
Match: sp|Q9FFX4|KNU_ARATH (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.5e-07 Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 0
BLAST of CsGy5G020180 vs. Swiss-Prot
Match: sp|Q39261|ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.5e-07 Identity = 34/70 (48.57%), Postives = 42/70 (60.00%), Query Frame = 0
BLAST of CsGy5G020180 vs. TrEMBL
Match: tr|A0A0A0KT61|A0A0A0KT61_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G583280 PE=4 SV=1) HSP 1 Score: 557.8 bits (1436), Expect = 1.6e-155 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
BLAST of CsGy5G020180 vs. TrEMBL
Match: tr|A0A1S3BGD7|A0A1S3BGD7_CUCME (zinc finger protein 1-like OS=Cucumis melo OX=3656 GN=LOC103489537 PE=4 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 7.2e-108 Identity = 243/316 (76.90%), Postives = 254/316 (80.38%), Query Frame = 0
BLAST of CsGy5G020180 vs. TrEMBL
Match: tr|A0A2N9IKW2|A0A2N9IKW2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52483 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 5.4e-39 Identity = 129/326 (39.57%), Postives = 172/326 (52.76%), Query Frame = 0
BLAST of CsGy5G020180 vs. TrEMBL
Match: tr|A0A2P5AM38|A0A2P5AM38_9ROSA (Yin/yang transcription factor OS=Trema orientalis OX=63057 GN=TorRG33x02_347000 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 1.5e-33 Identity = 109/265 (41.13%), Postives = 150/265 (56.60%), Query Frame = 0
BLAST of CsGy5G020180 vs. TrEMBL
Match: tr|A0A2I4GZX7|A0A2I4GZX7_9ROSI (zinc finger protein 3-like OS=Juglans regia OX=51240 GN=LOC109012333 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 1.5e-33 Identity = 124/317 (39.12%), Postives = 160/317 (50.47%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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