Lsi04G004710 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi04G004710
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionRegulator of chromosome condensation (RCC1) family protein
Locationchr04 : 4415272 .. 4420175 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTAGGTACAGAATTGATATTTTTCCAAAAAAAAAAAAAAATTATGAGTTTTGGTTGAATTAGTTAAGGGTTGATTTGTGTTGATAAACTTTAATGTTGTGGAAAAAGCTGTATTTTCGTTATGACTGATGTTGGAGAATGCACAATCATTTAGGGTATGTTTGGGATGCCAAAATCACTTTTTTCCTTGTCAAAATCATTTTTTTTTTTTTTATAAAAAGTTGATGTTTGGCACTCACATAAAATTGATTTTTTAAAAATTTAAAATCACTAAAAATTGATTTTGTAGGTATCAGTTTATTGGTGATTTGGTTGGGGTGATTATTAGGGAATCAAATAAAAAATTTAGAACACCAAATTTGCCCCTCATATTAAAGGATAGGATTAAGCCCTAATCCATTTCTTCCTTCTCTTTCAGCCGATACATCCTCTCTCTCGTGTCCGTCGCTTGGTTCCATTAACTATTCGTGGTAGTGCTGATTTCAGTAAGTTTTTGTTTTTTGTAATTTTCTTTTCACATGGATGAGCTTCAATTTTTAGCAGTTTTTGTTGCTTTTTCACGGTATCATTCCTTAGTTTTTTGTTACTATTTACTCTGTTCCTTTCGTGGCTTTTCCTCTTTATATGAACAATTTTTTTGGGATATTTCAATCATTGTCTTCGATCATTGTTGATTTTTTTTAGTCTCTCTACTTTTCTGATGGAGCGGGAGAAAATTGCAAGACTTCTTATATCTCAGTTAATGTTTTTGTTATACAGTTTGTATTTCAATAGATAATATCTAGTTTAAGTATTTTGTAATGATACAAAAATTTCTAGATTGGATGAGATATATGTTTTGAATTTTTTTTTGTTTTTATTATGTGTATTTTTCTTACCTCACATATCAATTATGTATACAATAATTTAAAATTAAAATAAATTAATAAAATTAGATATTTTTATAATTATTTTTTAAAACAAAAATCCAAATATAAAATACCCTTTTTAGTAATTTGGTAATTTTAAAATTACTTTTAAAACCAAACATGGTAAATTCAAAATCACTTTTATATATTTGAAAATCACTTAAAAAGTTTGGAACCAAACATAGGTTTGATTGTTTAAAAATCAATTTTATAAAATCAAATTGTTCCAAAATCTCTATCACTAAAATCACCACTCCAACTATCACTCCCAAACACACCCTTAGTCATTTGTCCCCATTATTGAAAATAATGAAGGACGACTCTTTGTTATAGTATATATTGACATGTTAATTGTTTATGGAATGTGAGTGTGAGAGTACTATTGTTGGATAACCTTAATTTTATACTCACTAAAATTGTGAAATATAGTATGGATAGTTAAATTAAGGTGATCGCCAAAATGAGCTTAGTTCTAATTGGCATAAGGGTTGTTCATGGGTTCGGTTGGGTTGGGTTGAAACATCTTTTAGATCCAACCAATTGTTTGAGTTGTGTAAGTTTCTTCAACAGAAATAACCCTGATTAAGTAATGAATCAAACTCAACCCAACCCAATCCAACCATGAAATATTCATGTTGTATTGTTCGAGTTATTCGGGTCAATTATTTAAACTTTTGTTCTAAAAATAAATGAAATGTTTAATATGTAAATACTTTATTTAATTATCATCATATATTAAATTAAGATTAAAAACTCAATTTCCATTTATATTAAGAAAATTTTCTTTTCAAGGTGTTTAAAAAATATTTTAAAGAATTGTTATAAAAATAAATTATCCAAAAATAAATAAATAAAATATGTAGATATTATCGTATCATAAGTATAAAAGAAAAAAATAAATAAAACTTTCAAAATTTATAATATATTAGGATTGATTTATGTTATTTTAGCATAATCCATGAACCATCACATCCCATTAAATTTTCGGATTGGGTTGGATTAACTTTTCAAGAATTTTTTTAACACCTTTAATTGGCGTTACATCTCTCCTCGGAAGTTGGAGGTTAGATGTCTCATGAGTTGTTTGTATTTGTGCTAAAATAAATTAAATTAAATTAAGGTCATCAAAAGAGAAGAATGGAACTCAAGAAAAAAAGGGAGAAAAAATCCAATCAGATGAATATTGTTGGTAGTTCATTCGCAACGCAGATTGAACTCACTGCCAAACTCGGCTGCCTCATCCAAGTAAATTTTCGTCTTTCATCTCGGCGCTGGTCCATACTCCTCAGTCCTCCGCCGGAAAACTTTACCGGAGCAAATTACTTTAAGAAAAACGACAGCCCTAAATTAAGATTAGCCCTTCGTTAGTTGCAGAATTGATCCATGAACTGATCTCCAATTAATGGAAGACAACGTCGAGCAAGAGATATGGAGTTGGGGGGCAGGAACCGACGCCCAGCTCGGCACCGGGCGACTCGAGGACGACAATCTCCCTCAACTCCTCCGAACACCGACACTCTCCTCCGTCCCCGCCATCTCATCCCTGTCCTGCGGCGGCGCTCATGTCATCGCTTTGACTGCCGGTATCCGATCCTCCTCCACCATAAAAGGGTTCCTCCAATGCCTCTGTCTTGTTCTTTCCCATCCTTTTATTTTCCTTCAAGCATTCTGTGTTAATATTATAGGAATAAACGAGTAAATATGTTGTAAATTTTCAGTTTAAGCTTTATGAATTTGATAGTGACTCAAAACCCGGATTCGAATTCCTGTACTGCTCATTTACTCTCTAATTAGTATCAATACTTCCGGGAGTGTAAAAGAATATAACCAAAATAATAAATATACTGTAACTTATGAATTAAAGAATTTAAGCTTTTGATTTAGTGGTACTAATGTTTTTGAAGGTGGTGGGGTGCTTACATGGGGAAGAGGCAATTCAGGGCAGTTAGGGCTAGGAGACATGGCAAGCAGCTTAAACCCTAAGCCAGTGATGGGGTTGGGAAGCTACTTCATAACCCACATTTCTGCAGGCTGGAGCCATTCTGGTTTTGTTTCAGGTCAGAATATTAATTATTGGTTCTTCTTCTTTATGAAGTCTTGCATTACATCTTTCAGTAGAACCCTGTTTCCATTTTTCTGGTTTTTTTTTTGTTGTAGATAAGGGAAAGCTTTATACTTGTGGAGATGGCTCATTTGGGCAGTTAGGGCATGGAGATTACCAGTCACGTTGCTTCCCTGATGAGGTCCTGTTTTTCTCTGATAAACATGTTGATCAGATTGCATGTGGGATGCGCCACTCTCTTGCATTGGTGAAAGGTACAGAAAATTTGATGATGATAATGGAACTGCCATTGTTCTACCTTATTCTTTGCCAATGGAACTGCCATTGTTTTTCTCTGGTTTATTCTTTGCTAATGGAACTGCCATCTGATCACTCTGTTTTTCTCTGGTTTATTCTTTGCTAATGGAACTGCCATTGTTCTACCTTCTCTATATCTATATCTAGGGTTGTCAAGAATTTTGTATGTTCTGCCATTGTTTTGATGTCAATGCAGTCCATCTGAAAATTTGATGATGATAATGCAGGTTGTTCTGGTGAACAAGTTTATGGATTTGGAGCTGGGAAACGAGGTCAATTGGGTATCTCCAAGAAGATTCAGAATATTAATCTTCCCATACTTTCTTCCGAATTGGAAGCTGCTGAAATAGTTGGCGTAGCTGCTGGTGGAGATCACAGTGCTGCTCTATCCGGTGAGTTGCATCGAATTTTCTTTGTATCCATATTGATTCCTCCAGTAAATTTGAAATTTTGGCATCAGTACAGTGAGCCATGTAAGGGCATGCAGCCAATTTGAATTGCATGGGCAACACCAATTTAGAATGACTTTCTAAGTGCTTAAAAAAGTGTTTTTAGGATCTATTAAGGGCATTCAACCTAACAGTTGTTATGTGTTGGCTGCTATTGCTTAAGCTGATGGGCATCTCTACACTTGGGGAAGGGGATTCAAAAGCAAATCAGACGCATATTCTCCTCAACCTCTACATTCGCCTTTGTTGTTCAGTAAAGTTGCTCTTGGATGGAATCATGCACTAGTTTTAACTGGTATTAACATTCATTTCACTTCTTATCTGATTGAATAGTAAATCCACCAGTACGCTTTCAGTTTTACCAGGATTAGATAATCTTCTTGTTAAGTGGCACCATCCCTATCGTGAACAGTTGAGGGAGAACTTTATATGCTTGGTGGAAAACATCACGGAGCGCTGAGTGATTCTGAAATGCTAAATGCGACAATGTCTCTGCCTGGTAAAGAAATTAACTTTATTATTTGCCTTCATAACGAGCAAACCGTTCGAGTTCTTACATGAGTTGTTTGCTGATTACCACTTGATATGTGGATTTTCATTGTATTGCAGGTGATTCTGAGGAAGATAACTTCCGACCAGTCCCTGCTCTTAGTGGAATAAAGGTCTTGGATATTGCAGCCGGAGCCGAGCATTCTGCAATCATTACAGGCATGGTTTTGCAAAGTTGTTGGTTAATATCATTTTTGGTTGCCCTCCTCATATTGTTCGAGTTTTATTGATCATGCAGAGGATGGAGCTGTAAAGACTTGGGGTTGGGGGGAGCATGGTCAGCTGGGTTTGGGAGATACATGTGACCACACCAATCCACAAACGGTGAATCTTAACCTCAAACTTGAGAGTACTGCTTTTGATGTCAAAGTCTATTGTGGCAGTGGCTTTACAGTGGCTGTTGCAACATCCCATGCTGCTTCAAATCTCCCCAATTGAAAAACTGCATTGCTCCTTGGAGATAACTCCAGTGAGCTAACTGGTAGCTGATCTGCCATTGTATGATTTCAAACTTTATGATTTGATATGTAAATTATGAGGGAAAAAAGGGAGGATTGCAACAAAAGCAATATTTACATTAGCCATCGCAGGTTGAAATGAATCTTCAACATTCTTTATTGAGCTAATTGAGTCTCGTGG

mRNA sequence

GTTAGGTACAGAATTGATATTTTTCCAAAAAAAAAAAAAAATTATGAGTTTTGGTTGAATTAGTTAAGGGTTGATTTGTGTTGATAAACTTTAATGTTGTGGAAAAAGCTGTATTTTCGTTATGACTGATGTTGGAGAATGCACAATCATTTAGGGTATGTTTGGGATGCCAAAATCACTTTTTTCCTTGTCAAAATCATTTTTTTTTTTTTTATAAAAAGTTGATGTTTGGCACTCACATAAAATTGATTTTTTAAAAATTTAAAATCACTAAAAATTGATTTTGTAGGTATCAGTTTATTGGTGATTTGGTTGGGGTGATTATTAGGGAATCAAATAAAAAATTTAGAACACCAAATTTGCCCCTCATATTAAAGGATAGGATTAAGCCCTAATCCATTTCTTCCTTCTCTTTCAGCCGATACATCCTCTCTCTCGTGTCCGTCGCTTGGTTCCATTAACTATTCGTGGTAGTGCTGATTTCAGTCATCAAAAGAGAAGAATGGAACTCAAGAAAAAAAGGGAGAAAAAATCCAATCAGATGAATATTGTTGGTAGTTCATTCGCAACGCAGATTGAACTCACTGCCAAACTCGGCTGCCTCATCCAAGTAAATTTTCGTCTTTCATCTCGGCGCTGGTCCATACTCCTCAGTCCTCCGCCGGAAAACTTTACCGGAGCAAATTACTTTAAGAAAAACGACAGCCCTAAATTAAGATTAGCCCTTCGTTAGTTGCAGAATTGATCCATGAACTGATCTCCAATTAATGGAAGACAACGTCGAGCAAGAGATATGGAGTTGGGGGGCAGGAACCGACGCCCAGCTCGGCACCGGGCGACTCGAGGACGACAATCTCCCTCAACTCCTCCGAACACCGACACTCTCCTCCGTCCCCGCCATCTCATCCCTGTCCTGCGGCGGCGCTCATGTCATCGCTTTGACTGCCGGTATCCGATCCTCCTCCACCATAAAAGGTTTAAGCTTTATGAATTTGATAGTGACTCAAAACCCGGATTCGAATTCCTGTGGTGGGGTGCTTACATGGGGAAGAGGCAATTCAGGGCAGTTAGGGCTAGGAGACATGGCAAGCAGCTTAAACCCTAAGCCAGTGATGGGGTTGGGAAGCTACTTCATAACCCACATTTCTGCAGGCTGGAGCCATTCTGGTTTTGTTTCAGATAAGGGAAAGCTTTATACTTGTGGAGATGGCTCATTTGGGCAGTTAGGGCATGGAGATTACCAGTCACGTTGCTTCCCTGATGAGGTCCTGTTTTTCTCTGATAAACATGTTGATCAGATTGCATGTGGGATGCGCCACTCTCTTGCATTGGTGAAAGGTTGTTCTGGTGAACAAGTTTATGGATTTGGAGCTGGGAAACGAGGTCAATTGGGTATCTCCAAGAAGATTCAGAATATTAATCTTCCCATACTTTCTTCCGAATTGGAAGCTGCTGAAATAGTTGGCGTAGCTGCTGGTGGAGATCACAGTGCTGCTCTATCCGTTGAGGGAGAACTTTATATGCTTGGTGGAAAACATCACGGAGCGCTGAGTGATTCTGAAATGCTAAATGCGACAATGTCTCTGCCTGGTGATTCTGAGGAAGATAACTTCCGACCAGTCCCTGCTCTTAGTGGAATAAAGGTCTTGGATATTGCAGCCGGAGCCGAGCATTCTGCAATCATTACAGGCATGGTTTTGCAAAAGGATGGAGCTGTAAAGACTTGGGGTTGGGGGGAGCATGGTCAGCTGGGTTTGGGAGATACATGTGACCACACCAATCCACAAACGGTGAATCTTAACCTCAAACTTGAGAGTACTGCTTTTGATGTCAAAGTCTATTGTGGCAGTGGCTTTACAGTGGCTGTTGCAACATCCCATGCTGCTTCAAATCTCCCCAATTGAAAAACTGCATTGCTCCTTGGAGATAACTCCAGTGAGCTAACTGGTAGCTGATCTGCCATTGTATGATTTCAAACTTTATGATTTGATATGTAAATTATGAGGGAAAAAAGGGAGGATTGCAACAAAAGCAATATTTACATTAGCCATCGCAGGTTGAAATGAATCTTCAACATTCTTTATTGAGCTAATTGAGTCTCGTGG

Coding sequence (CDS)

ATGGAAGACAACGTCGAGCAAGAGATATGGAGTTGGGGGGCAGGAACCGACGCCCAGCTCGGCACCGGGCGACTCGAGGACGACAATCTCCCTCAACTCCTCCGAACACCGACACTCTCCTCCGTCCCCGCCATCTCATCCCTGTCCTGCGGCGGCGCTCATGTCATCGCTTTGACTGCCGGTATCCGATCCTCCTCCACCATAAAAGGTTTAAGCTTTATGAATTTGATAGTGACTCAAAACCCGGATTCGAATTCCTGTGGTGGGGTGCTTACATGGGGAAGAGGCAATTCAGGGCAGTTAGGGCTAGGAGACATGGCAAGCAGCTTAAACCCTAAGCCAGTGATGGGGTTGGGAAGCTACTTCATAACCCACATTTCTGCAGGCTGGAGCCATTCTGGTTTTGTTTCAGATAAGGGAAAGCTTTATACTTGTGGAGATGGCTCATTTGGGCAGTTAGGGCATGGAGATTACCAGTCACGTTGCTTCCCTGATGAGGTCCTGTTTTTCTCTGATAAACATGTTGATCAGATTGCATGTGGGATGCGCCACTCTCTTGCATTGGTGAAAGGTTGTTCTGGTGAACAAGTTTATGGATTTGGAGCTGGGAAACGAGGTCAATTGGGTATCTCCAAGAAGATTCAGAATATTAATCTTCCCATACTTTCTTCCGAATTGGAAGCTGCTGAAATAGTTGGCGTAGCTGCTGGTGGAGATCACAGTGCTGCTCTATCCGTTGAGGGAGAACTTTATATGCTTGGTGGAAAACATCACGGAGCGCTGAGTGATTCTGAAATGCTAAATGCGACAATGTCTCTGCCTGGTGATTCTGAGGAAGATAACTTCCGACCAGTCCCTGCTCTTAGTGGAATAAAGGTCTTGGATATTGCAGCCGGAGCCGAGCATTCTGCAATCATTACAGGCATGGTTTTGCAAAAGGATGGAGCTGTAAAGACTTGGGGTTGGGGGGAGCATGGTCAGCTGGGTTTGGGAGATACATGTGACCACACCAATCCACAAACGGTGAATCTTAACCTCAAACTTGAGAGTACTGCTTTTGATGTCAAAGTCTATTGTGGCAGTGGCTTTACAGTGGCTGTTGCAACATCCCATGCTGCTTCAAATCTCCCCAATTGA

Protein sequence

MEDNVEQEIWSWGAGTDAQLGTGRLEDDNLPQLLRTPTLSSVPAISSLSCGGAHVIALTAGIRSSSTIKGLSFMNLIVTQNPDSNSCGGVLTWGRGNSGQLGLGDMASSLNPKPVMGLGSYFITHISAGWSHSGFVSDKGKLYTCGDGSFGQLGHGDYQSRCFPDEVLFFSDKHVDQIACGMRHSLALVKGCSGEQVYGFGAGKRGQLGISKKIQNINLPILSSELEAAEIVGVAAGGDHSAALSVEGELYMLGGKHHGALSDSEMLNATMSLPGDSEEDNFRPVPALSGIKVLDIAAGAEHSAIITGMVLQKDGAVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAFDVKVYCGSGFTVAVATSHAASNLPN
Homology
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BLAST of Lsi04G004710 vs. Swiss-Prot
Match: HERC1_HUMAN (Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 5.7e-30
Identity = 88/289 (30.45%), Postives = 138/289 (47.75%), Query Frame = 1 

Query: 66   STIKGLSFMNLIVTQNPDSNSC-----GGVLTWGRGNSGQLGLGDMASSLNPKPVMGLGS 125
            S ++G     L+ +   D +S      G V +WG G+ G+LG G+      P+ +  L  
Sbjct: 4074 SALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG 4133

Query: 126  YFITHISAGWSHSGFVSDKGKLYTCGDGSFGQLGHGDYQSRCFPDEVLFFSDKHVDQIAC 185
              +  +S G+ HS  V+  GKL+T G+G +G+LG G+  ++  P+ V       + Q+AC
Sbjct: 4134 EEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVAC 4193

Query: 186  GMRHSLALVKGCSGEQVYGFGAGKRGQLGISKKIQNINLPILSSELEAAEIVGVAAGGDH 245
            G+ H+LA+     G  V+ FG G  G+LG+       + P     L    I  VA G   
Sbjct: 4194 GLNHTLAV--SADGSMVWAFGDGDYGKLGLGNSTAK-SSPQKIDVLCGIGIKKVACGTQF 4253

Query: 246  SAALSVEGELYMLGGKHHGALSDSEMLNATMSLPGDSEEDNFRP--VPALSGIKVLDIAA 305
            S AL+ +G +Y  G             +  + LP     ++ RP  +P L+G+ + D+A 
Sbjct: 4254 SVALTKDGHVYTFG------------QDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV 4313

Query: 306  GAEHSAIITGMVLQKDGAVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLK 348
            GAEH+     + L  +G V  WG    GQLGLG T +H    T+   L+
Sbjct: 4314 GAEHT-----LALASNGDVYAWGSNSEGQLGLGHT-NHVREPTLVTGLQ 4341

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BLAST of Lsi04G004710 vs. Swiss-Prot
Match: UVR8_ARATH (Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.1e-28
Identity = 100/361 (27.70%), Postives = 157/361 (43.49%), Query Frame = 1 

Query: 9   IWSWGAGTDAQLGTGRLEDDNLPQLLRTPTLSSVPAISSLSCGGAHVIALTAGIRSSSTI 68
           + SWG G D QLG G  ED   P  L   +      I S++CG  H +A           
Sbjct: 36  VCSWGRGEDGQLGHGDAEDRPSPTQL---SALDGHQIVSVTCGADHTVAY---------- 95

Query: 69  KGLSFMNLIVTQNPDSNSCGGVLTWGRGNSGQLGLGDMASSLNPKPVMGLGSYFITHISA 128
                          S S   V +WG G+ G+LG G+ +    P P+  L    I  I+ 
Sbjct: 96  ---------------SQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIAC 155

Query: 129 GWSHSGFVSDKGKLYTCGDGSFGQLGHGDYQSRCFPDEVLFFSDKHVDQIACGMRHSLAL 188
           G SH   V+ +G++ + G    GQLG GD +    P ++  F    +  +A G  H+ A+
Sbjct: 156 GDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV 215

Query: 189 VKGCSGEQVYGFGAGKRGQLGISKKIQNINLPILSSELEAAEIVGVAAGGDHSAALSVEG 248
            +      +YG+G G+ G LG+  +   + +P   +     ++  VA G  H+ ++S  G
Sbjct: 216 TE---DGDLYGWGWGRYGNLGLGDRTDRL-VPERVTSTGGEKMSMVACGWRHTISVSYSG 275

Query: 249 ELYMLGGKHHGALSDSEMLNATMSLPGDSEEDNFRP--VPALSGIKVLDIAAGAEHSAII 308
            LY  G   +G L   ++            ED+  P  + ALS   +  I+ G  H+   
Sbjct: 276 ALYTYGWSKYGQLGHGDL------------EDHLIPHKLEALSNSFISQISGGWRHT--- 335

Query: 309 TGMVLQKDGAVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAFDVKVYCGSGFTVA 368
             M L  DG +  WGW + GQ+G+G+  D  +P    + ++       V+V CG   T+A
Sbjct: 336 --MALTSDGKLYGWGWNKFGQVGVGNNLDQCSP----VQVRFPDDQKVVQVSCGWRHTLA 343

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BLAST of Lsi04G004710 vs. Swiss-Prot
Match: HERC2_DROME (Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster GN=HERC2 PE=1 SV=3)

HSP 1 Score: 127.1 bits (318), Expect = 4.1e-28
Identity = 106/368 (28.80%), Postives = 164/368 (44.57%), Query Frame = 1 

Query: 8    EIWSWGAGTDAQLGTGRLEDDNLPQLLRTPTLSSVPAISSLSCGGAHVIALTAGIRSSST 67
            ++++ G GT+ +LG G   +  LP  L       V  ++  S GG H +ALT        
Sbjct: 3039 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHS-GGKHALALTLD------ 3098

Query: 68   IKGLSFMNLIVTQNPDSNSCGGVLTWGRGNSGQLGLGDMASSLNPKPVMGLGSYFITHIS 127
                                G V +WG G  G+LG G+  +   P+ V  L +  I  ++
Sbjct: 3099 --------------------GKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVA 3158

Query: 128  AGWSHSGFVSDKGKLYTCGDGSFGQLGHGDYQSRCFPDEVLFFSDKHVDQIACGMRHSLA 187
             G SHS  +S +G+LYT G G +G+LGHGD  ++  P  V   + + V Q+ACG R +  
Sbjct: 3159 CGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQT 3218

Query: 188  LVKGCSGEQVYGFGAGKRGQLGISKKIQNINLPILSSELEAAEIVGVAAGGDHSAALSVE 247
            L     G  V+ +G G  G+LG     +  + P     L    +V +  G   S AL+  
Sbjct: 3219 LALTEDG-AVFSWGDGDFGKLGRGGS-EGSDTPHEIERLSGIGVVQIECGAQFSLALTRA 3278

Query: 248  GELYMLGGKHHGALSDSEMLNATMSLPGDSEEDNFRPVPALSGIKVLDIAAGAEHSAIIT 307
            GE++  G   +  L             GD      +P+  L G +V+ +A GA H   +T
Sbjct: 3279 GEVWTWGKGDYYRLGHG----------GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVT 3338

Query: 308  GMVLQKDGAVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAFDVKVYCGSGFTVAV 367
                   G V  WG  +HGQ G G+T  +  P  V   + L++  F  +V CGS  ++A 
Sbjct: 3339 DA-----GQVYAWGDNDHGQQGSGNTFVNKKPALV---IGLDA-VFVNRVACGSSHSIAW 3358

Query: 368  ATSHAASN 376
               +A+S+
Sbjct: 3399 GLPNASSD 3358

[Close]
BLAST of Lsi04G004710 vs. Swiss-Prot
Match: HERC3_HUMAN (Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.3e-28
Identity = 88/283 (31.10%), Postives = 135/283 (47.70%), Query Frame = 1 

Query: 90  VLTWGRGNSGQLGLGDMASSLNPKP-VMG-LGSYFITHISAGWSHSGFVSDKGKLYTCGD 149
           +L WG  + GQ G+      +  +P V G +    +  ++ G +HS F+ + G++YTCG 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 150 GSFGQLGHGDYQSRCFPDEVLFFSDKHVDQIACGMRHSLALVKGCSGEQVYGFGAGKRGQ 209
            + GQLGH    ++  P+++   +D+H+  +ACG  HSLAL       Q++ +GAG  GQ
Sbjct: 61  NTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLAL---SDRGQLFSWGAGSDGQ 120

Query: 210 LGISKKIQNINLPILSSELEAAEIVGVAAGGDHSAALSVEGELYMLGGKHHGALSDSEML 269
           LG+     ++ +P L  +L    I+ V+ G  H  AL+ +G+ +  G   HG       L
Sbjct: 121 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG------QL 180

Query: 270 NATMSLPGDSEEDNFRPVPALSGIKVLDIAAGAEHSAIITGMVLQKDGAVKTWGWGEHGQ 329
                 P  +     R   +L GI +  +AAG  HS       L   GAV  WG    GQ
Sbjct: 181 GLGKEFPSQASPQRVR---SLEGIPLAQVAAGGAHS-----FALSLSGAVFGWGMNNAGQ 240

Query: 330 LGLGDTCDHTNPQTVNLNLKLESTAFDVKVYCGSGFTVAVATS 371
           LGL D  D  +P     ++KL  T   V + CG   T  +  S
Sbjct: 241 LGLSDEKDRESP----CHVKLLRTQKVVYISCGEEHTAVLTKS 260

[Close]
BLAST of Lsi04G004710 vs. Swiss-Prot
Match: HERC6_HUMAN (Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6 PE=2 SV=2)

HSP 1 Score: 123.2 bits (308), Expect = 5.9e-27
Identity = 94/278 (33.81%), Postives = 138/278 (49.64%), Query Frame = 1 

Query: 90  VLTWGRGNSGQLGLGDMASSLNPKPVMGLGSYFITHISAGWSHSGFVSDKGKLYTCGDGS 149
           VL+ G  + GQLG         P+P+  L +  +  +S G  HS  V  KG+++  G GS
Sbjct: 44  VLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGS 103

Query: 150 FGQLGHGDYQSRCF-PDEVLFFSDKHVDQIACGMRHSLALVKGCSGEQVYGFGAGKRGQL 209
            GQLG G+++   F P +++  +D  + Q++CG  HSLAL K     QV+ +G    GQL
Sbjct: 104 EGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK---DSQVFSWGKNSHGQL 163

Query: 210 GISKKIQNINLPILSSELEAAEIVGVAAGGDHSAALSVEGELYMLGGKHHGALSDSEMLN 269
           G+ K+  +   P     LE   +  VAAGG HS ALS+ G  +  G    G L+ S    
Sbjct: 164 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALS---- 223

Query: 270 ATMSLPGDSEEDNFRPVPALSGIKVLDIAAGAEHSAIITGMVLQKDGAVKTWGWGEHGQL 329
              ++P  S +     V AL  + V+ I+ G  H+A++T     +DG V T+G    GQL
Sbjct: 224 -GRNVPVQSNKP--LSVGALKNLGVVYISCGDAHTAVLT-----QDGKVFTFGDNRSGQL 283

Query: 330 GLGDTCDHTNPQTVNLNLKLESTAFDVKVYCGSGFTVA 367
           G   T +   PQ V     L S     ++ CGS  T+A
Sbjct: 284 GYSPTPEKRGPQLVERIDGLVS-----QIDCGSYHTLA 301

[Close]
BLAST of Lsi04G004710 vs. TrEMBL
Match: A0A0A0KVU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604210 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 5.8e-106
Identity = 215/328 (65.55%), Postives = 235/328 (71.65%), Query Frame = 1 

Query: 1   MEDNVEQEIWSWGAGTDAQLGTGRLEDDNLPQLLRTPTLSSVPAISSLSCGGAHVIALTA 60
           MED+VEQE+WSWGAGTDAQLGTGRLED+NLPQL+RTP+LSS PAIS LSCGGAHVIALTA
Sbjct: 7   MEDDVEQELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVIALTA 66

Query: 61  GIRSSSTIKGLSFMNLIVTQNPDSNSCGGVLTWGRGNSGQLGLGDMASSLNPKPVMGLGS 120
           G                          GGVLTWGRGNSGQLGLGDM SSL+PKPVM LGS
Sbjct: 67  G--------------------------GGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGS 126

Query: 121 YFITHISAGWSHSGFVSDKGKLYTCGDGSFGQLGHGDYQSRCFPDEVLFFSDKHVDQIAC 180
           YFITH+SAGWSHSGFVSD+GKLYTCGDGSFGQLGHGDYQ RCFP+EVLFFSDKHVD+IAC
Sbjct: 127 YFITHVSAGWSHSGFVSDEGKLYTCGDGSFGQLGHGDYQLRCFPEEVLFFSDKHVDKIAC 186

Query: 181 GMRHSLALVKGCSGEQVYGFGAGKRGQLGISKKIQNINLPILSSELEAAEIVGVAAGGDH 240
           GMRHSLALVK      VYGFGAGKRGQLGISKKIQ +NLPILSS LEAAEIVG+AAGGDH
Sbjct: 187 GMRHSLALVK------VYGFGAGKRGQLGISKKIQTVNLPILSSNLEAAEIVGIAAGGDH 246

Query: 241 SAALSVEGELYMLGGKHHGALSDSEMLNATMSLPGDSEEDNFRPVPALSGIKVLDIAAGA 300
           SAALS EG LY  G    G  S S++  +   LP  S                  +A G 
Sbjct: 247 SAALSAEGHLYTWG---RGFKSTSDVY-SPQHLPSPSSFSK--------------VALGW 279

Query: 301 EHSAIITGMVLQKDGAVKTWGWGEHGQL 329
            H+     +VL  +G +   G   HG L
Sbjct: 307 NHA-----LVLTDEGELYMLGGKHHGAL 279

[Close]
BLAST of Lsi04G004710 vs. TrEMBL
Match: A0A103XSI8_CYNCS (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II OS=Cynara cardunculus var. scolymus GN=Ccrd_001806 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 2.1e-87
Identity = 187/374 (50.00%), Postives = 236/374 (63.10%), Query Frame = 1 

Query: 1   MEDNVEQEIWSWGAGTDAQLGTGRLEDDNLPQLLRTPTLSSVPAISSLSCGGAHVIALTA 60
           ++D  E+E+WSWGAGT+ QLGTG+L+D+++PQLL  P LSS   +S LSCGGAHVIALT 
Sbjct: 7   VDDTEEKEVWSWGAGTEGQLGTGKLQDEHIPQLL--PILSS---LSLLSCGGAHVIALTP 66

Query: 61  GIRSSSTIKGLSFMNLIVTQNPDSNSCGGVLTWGRGNSGQLGLGDMASSLNPKPVMGLGS 120
           G                            VLTWGRG SGQLG G++ +SL PKPV  L +
Sbjct: 67  GKL--------------------------VLTWGRGTSGQLGHGNLVNSLEPKPVDLLNN 126

Query: 121 YFITHISAGWSHSGFVSDKGKLYTCGDGSFGQLGHGDYQSRCFPDEVLFFSDKHVDQIAC 180
           Y ITH+SAGW+HSGFVS+ G LYTCGDGSFGQLG GDY+S+  P +V  F+ +HV+QIAC
Sbjct: 127 YNITHVSAGWNHSGFVSESGHLYTCGDGSFGQLGLGDYRSQNCPIKVSCFAFRHVEQIAC 186

Query: 181 GMRHSLALVKGCSGEQVYGFGAGKRGQLGIS-KKIQNINLPILSSELEAAEIVGVAAGGD 240
           GMRHSLAL+KG  G+QVYGFG+GKRGQLG S +KI++I+LP   S LE   +  ++A GD
Sbjct: 187 GMRHSLALLKGEHGDQVYGFGSGKRGQLGTSNEKIKSISLPQSVSGLEEVNVSSISANGD 246

Query: 241 HSAALSVEGELYMLGGKHHGALSDSEMLNATMSLPGDSEED-NFRPVPALSGIKVLDIAA 300
           HSAALS +G LY  G +  G   D    N  +S    ++    +     L+    + +  
Sbjct: 247 HSAALSADGHLYTWG-RGFGGTPDVSCPNRVISPFSFTQATLGWNHALVLTDEGEVLMLG 306

Query: 301 GAEHSAIITGM---VLQKDGAVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAFDV 360
           G+ H          +  ++G V TWGWGEHGQLGLG T DHT+PQ V L   +       
Sbjct: 307 GSHHGVHNNPQKENLANQNGVVMTWGWGEHGQLGLGCTSDHTSPQVVRLGENIAHKHMTS 348

Query: 361 KVYCGSGFTVAVAT 370
           KVYCGSGFT  V T
Sbjct: 367 KVYCGSGFTFVVRT 348

[Close]
BLAST of Lsi04G004710 vs. TrEMBL
Match: A0A022QIZ8_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a008743mg PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 5.6e-85
Identity = 181/380 (47.63%), Postives = 235/380 (61.84%), Query Frame = 1 

Query: 2   EDNVEQEIWSWGAGTDAQLGTGRLEDDNLPQLLRTPTLSSVPAISSLSCGGAHVIALTAG 61
           E + EQ+IWSWGAGTD QL TG L+D++ PQLLR P  SS+  ++SLSCGGAHVIAL++G
Sbjct: 9   ESDDEQDIWSWGAGTDGQLATGILQDEHTPQLLR-PLSSSLGLVTSLSCGGAHVIALSSG 68

Query: 62  IRSSSTIKGLSFMNLIVTQNPDSNSCGGVLTWGRGNSGQLGLGDMASSLNPKPVMGLGSY 121
                                     G VLTWGRG SGQLG G+M + L+PK V      
Sbjct: 69  --------------------------GRVLTWGRGTSGQLGHGEMVNCLHPKLVNAFQDS 128

Query: 122 FITHISAGWSHSGFVSDKGKLYTCGDGSFGQLGHGDYQSRCFPDEVLFFSDKHVDQIACG 181
            +TH+SAGW+HSGFV + G ++TCGDGSFGQLGHGDY+S+  P  V +F  K V+Q+ACG
Sbjct: 129 VVTHVSAGWNHSGFVLENGAVFTCGDGSFGQLGHGDYKSQNLPLRVSYFVSKRVEQVACG 188

Query: 182 MRHSLALVKGCSGEQVYGFGAGKRGQLGIS-KKIQNINLPILSSELEAAEIVGVAAGGDH 241
           MRHSL L+KG S  +VYGFG GKRGQLGIS +K+++ +LP ++  L   EIV ++A GDH
Sbjct: 189 MRHSLVLLKGNSENRVYGFGLGKRGQLGISTEKVKSTSLPQITIGLTNLEIVNISANGDH 248

Query: 242 SAALSVEGELYMLGGKHHGALSDSEM----------------LNATMSLPGDSEEDNFRP 301
           SAAL+ +G LY  G +     SD  +                 N  + L   S+E+    
Sbjct: 249 SAALTADGSLYTWG-RGFSCASDESIPRLFEAAVTVDEVALGWNHALLLTRKSKEE---- 308

Query: 302 VPALSGIKVLDIAAGAEHSAIITGMVLQKDGAVKTWGWGEHGQLGLGDTCDHTNPQTVNL 361
           +  +   KVL IAAGAEHS ++T      +G + TWGWGEHGQLGLG T D  +PQ V+L
Sbjct: 309 IMPIIEKKVLQIAAGAEHSVLVTD-----NGLIMTWGWGEHGQLGLGGTDDQVSPQVVSL 351

Query: 362 NLKLESTAFDVKVYCGSGFT 365
                +     +V+CGSGF+
Sbjct: 369 GNTSATKHAACRVFCGSGFS 351

[Close]
BLAST of Lsi04G004710 vs. TrEMBL
Match: A0A067JES3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21709 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.6e-79
Identity = 170/330 (51.52%), Postives = 207/330 (62.73%), Query Frame = 1 

Query: 2   EDNVE--QEIWSWGAGTDAQLGTGRLEDDNLPQLLRTPTLSSVPAISSLSCGGAHVIALT 61
           E+N E  Q +WSWGAGTD QLGTG+LED+ LPQLL  P+LSS   IS L+CGGAHVIAL 
Sbjct: 17  EENKELHQRVWSWGAGTDGQLGTGKLEDELLPQLLHFPSLSSAGPISKLACGGAHVIALN 76

Query: 62  AGIRSSSTIKGLSFMNLIVTQNPDSNSCGGVLTWGRGNSGQLGLGDMASSLNPKPVMGLG 121
           AG                          G VL+WGRG SGQLG GD+ SSL PKPV  L 
Sbjct: 77  AG--------------------------GKVLSWGRGTSGQLGHGDILSSLYPKPVNFLD 136

Query: 122 SYFITHISAGWSHSGFVSDKGKLYTCGDGSFGQLGHGDYQSRCFPDEVLFFSDKHVDQIA 181
            Y ITH+SAGWSHSGFVSD G L+TCGDGSFGQLGHGDY S   P +V +F+++HV+QIA
Sbjct: 137 GYVITHVSAGWSHSGFVSDTGCLFTCGDGSFGQLGHGDYNSHTAPVKVSYFANRHVEQIA 196

Query: 182 CGMRHSLALVKGCSGEQVYGFGAGKRGQLGISK-KIQNINLPILSSELEAAEIVGVAAGG 241
           CGMRHSL L+K C G QVYGFG+GKRGQLGISK KI+++NLP L+   E  EI+ + A G
Sbjct: 197 CGMRHSLVLLKDCVGNQVYGFGSGKRGQLGISKDKIKSVNLPQLTCGFEHIEIISINANG 256

Query: 242 DHSAALSVEGELYMLGGKHHGALSDSEMLNATMSLPGDSEEDNFRPVPALSGIKVLDIAA 301
           DHSAA + +G L++ G                   PG+S  D   P   +S ++++ +A 
Sbjct: 257 DHSAAFTADGHLFVWG----------------RGFPGNS--DISTPQCLVSSLRLIKVAL 297

Query: 302 GAEHSAIITGMVLQKDGAVKTWGWGEHGQL 329
           G  H+  +T      DG V   G   HG L
Sbjct: 317 GWNHALTLTA-----DGEVFILGGDRHGAL 297

[Close]
BLAST of Lsi04G004710 vs. TrEMBL
Match: A0A061E5D2_THECC (Regulator of chromosome condensation family protein isoform 1 OS=Theobroma cacao GN=TCM_009957 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.1e-77
Identity = 171/350 (48.86%), Postives = 214/350 (61.14%), Query Frame = 1 

Query: 6   EQEIWSWGAGTDAQLGTGRLEDDNLPQLLRTPTLSSVPAISSLSCGGAHVIALTAGIRSS 65
           E+++WSWGAGTD QLGT RL+D++LPQLL  P+LSS   +S L+CGGAHV+ALT G    
Sbjct: 21  EEQLWSWGAGTDGQLGTARLQDEHLPQLLNLPSLSSAGPVSILACGGAHVVALTYG---- 80

Query: 66  STIKGLSFMNLIVTQNPDSNSCGGVLTWGRGNSGQLGLGDMASSL-NPKPVMGLGSYFIT 125
                                 G VLTWGRGNSGQLG G+M ++L  PKPVM L SYFIT
Sbjct: 81  ----------------------GKVLTWGRGNSGQLGHGEMVNTLLAPKPVMSLESYFIT 140

Query: 126 HISAGWSHSGFVSDKGKLYTCGDGSFGQLGHGDYQSRCFPDEVLFFSDKHVDQIACGMRH 185
            +SAGWSHSGFVSD+G  +TCGDGSFGQLGHGDY+S C P +V FF +KHV+QIACGMRH
Sbjct: 141 QVSAGWSHSGFVSDEGCAFTCGDGSFGQLGHGDYRSHCSPVKVSFFVNKHVEQIACGMRH 200

Query: 186 SLALVKGCSGEQVYGFGAGKRGQLGI-SKKIQNINLPILSSELEAAEIVGVAAGGDHSAA 245
           SL L+K  SG Q+YGFG+GKRGQLG+   +I++IN P  +   +  +I+ + A GDHSAA
Sbjct: 201 SLVLLKDNSGNQLYGFGSGKRGQLGVPMDRIKSINTPQFTCGFDDVKIISIGANGDHSAA 260

Query: 246 LSVEGELYMLGGKHHGALSDSEMLNATMSLPGDSEEDNFRPVPALSGIKVLDIAAGAEHS 305
           LS EG+LY + G+  GA SD         +P         P P LS         G  H+
Sbjct: 261 LSAEGQLY-IWGRGFGATSD-------FLIP------QHIPSPLLS-----KAVLGWNHA 312

Query: 306 AIITGMVLQKDGAVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAF 354
                ++L  DG V   G   HG L        +NP+ +N +  L    F
Sbjct: 321 -----LILSDDGEVYMLGGSHHGVL--------SNPEKMNPSKHLSGNPF 312

[Close]
BLAST of Lsi04G004710 vs. TAIR10
Match: AT1G27060.1 (AT1G27060.1 Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 238.0 bits (606), Expect = 9.2e-63
Identity = 137/307 (44.63%), Postives = 185/307 (60.26%), Query Frame = 1 

Query: 2   EDNVEQEIWSWGAGTDAQLGTGRLEDDNLPQLLRTPTLSSVPAISSLSCGGAHVIALTAG 61
           ++  E+++WSWGAGTD QLGT +L+D+ LPQLL   +L+S+P+IS L+CGGAHVIALT+G
Sbjct: 10  DEEEEEQVWSWGAGTDGQLGTTKLQDELLPQLL---SLTSLPSISMLACGGAHVIALTSG 69

Query: 62  IRSSSTIKGLSFMNLIVTQNPDSNSCGGVLTWGRGNSGQLGLGDMASSLNPKPVMGLGSY 121
                                     G V TWGRG+SGQLG GD+ +   PK V      
Sbjct: 70  --------------------------GKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDS 129

Query: 122 FITHISAGWSHSGFVSDKGKLYTCGDGSFGQLGHGDYQSRCFPDEVLFFSDKHVDQIACG 181
            IT  +AGWSHSGFVSD G ++TCG+GSFGQLGHGD  S   P +V  F++  V  +ACG
Sbjct: 130 VITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACG 189

Query: 182 MRHSLALVKGCSGEQVYGFGAGKRGQLGISK-KIQNINLPILSSELEAAEIVGVAAGGDH 241
           MRHSL L    +G QV GFG+GKRGQLG S  +I+++NLP + S L+  E+V ++A GDH
Sbjct: 190 MRHSLVLF---AGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDH 249

Query: 242 SAALSVEGELYMLGGKHHGALSDSEMLNATMSLPGDSEEDNFRPVPALSGIKVLDIAAGA 301
           SAA+S +G+ +  G    G       ++A  SLP              S +   ++A G 
Sbjct: 250 SAAISADGQFFSWGRGFCGGPD----VHAPQSLP--------------SPLSFREVAVGW 266

Query: 302 EHSAIIT 308
            H+ ++T
Sbjct: 310 NHALLLT 266

[Close]
BLAST of Lsi04G004710 vs. TAIR10
Match: AT5G12350.1 (AT5G12350.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 133.7 bits (335), Expect = 2.5e-31
Identity = 119/415 (28.67%), Postives = 183/415 (44.10%), Query Frame = 1 

Query: 8   EIWSWGAGT-DAQLGTGRLE---------DDNLPQLLRTPTLSSVPAISSLSCGGAHVIA 67
           +++ WG G  +  LG G            D  LP+ L +  +  V    +++CGG H + 
Sbjct: 266 DVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDV---QNIACGGQHAVL 325

Query: 68  LT---------------------AGIRSSSTIKGLSFMNLIVTQNPDSNSC-----GGVL 127
           +T                     + I+    I  L+  N+ +    + +SC     G + 
Sbjct: 326 VTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLY 385

Query: 128 TWGRGNSGQLGLGDMASSLNPKPV-MGLGSYFITHISAGWSHSGFVSDKGKLYTCGDGSF 187
           TWG+G+ G LG G+  S   PK V   L    ++ I+ G  H+  V+  G+L+T GDG+F
Sbjct: 386 TWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTF 445

Query: 188 GQLGHGDYQSRCFPDEVLFFSDKHVDQIACGMRHSLALVK---------GCSGEQVYGFG 247
           G LGHGD +S   P EV         + ACG+ H+ A+V+          CS  +++ +G
Sbjct: 446 GVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 505

Query: 248 AGKRGQLGISKKIQNINLPILSSELEAAEIVGVAAGGDHSAALSVEGELYMLGGKHHGAL 307
            G +G+LG   K   + +P   + L       VA G   + AL+  G +Y +G   +G L
Sbjct: 506 DGDKGRLGHGNKEPKL-VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQL 565

Query: 308 SDSEMLNATMSLPGDSEEDNFRPVPALSGIKVLDIAAGAEHSAIITGMVLQKDGAVKTWG 367
            +S           D +  N R    L    V +IA GA H A++T         V TWG
Sbjct: 566 GNSH---------ADGKTPN-RVEGKLHKSFVEEIACGAYHVAVLTSRT-----EVYTWG 625

Query: 368 WGEHGQLGLGDTCDHTNPQTVNLNLKLESTAFDVKVYCGSGFTVAVATSHAASNL 377
            G +G+LG GD  D  +P  V  +LK +       + CG+ FT AV     AS +
Sbjct: 626 KGSNGRLGHGDVDDRNSPTLVE-SLKDKQVK---SIACGTNFTAAVCIHRWASGM 657

[Close]
BLAST of Lsi04G004710 vs. TAIR10
Match: AT5G19420.2 (AT5G19420.2 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-29
Identity = 116/415 (27.95%), Postives = 181/415 (43.61%), Query Frame = 1 

Query: 8   EIWSWGAGT-DAQLGTGR------LE---DDNLPQLLRTPTLSSVPAISSLSCGGAHVIA 67
           +++ WG G  +  LG G       LE   D  LP+ L +  +  V    +++CGG H + 
Sbjct: 304 DVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDV---QNIACGGQHAVL 363

Query: 68  LT---------------------AGIRSSSTIKGLSFMNLIVTQNPDSNSC-----GGVL 127
           +T                     + ++    I  L+  N+ +    + +SC     G + 
Sbjct: 364 VTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLY 423

Query: 128 TWGRGNSGQLGLGDMASSLNPKPVMGL-GSYFITHISAGWSHSGFVSDKGKLYTCGDGSF 187
           TWG+G+ G LG G+  S   PK V  L     ++ I+ G  H+  V+  G+L+T GDG+F
Sbjct: 424 TWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTF 483

Query: 188 GQLGHGDYQSRCFPDEVLFFSDKHVDQIACGMRHSLALVK---------GCSGEQVYGFG 247
           G LGHGD +S   P EV         + ACG+ H+ A+V+          CS  +++ +G
Sbjct: 484 GVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 543

Query: 248 AGKRGQLGISKKIQNINLPILSSELEAAEIVGVAAGGDHSAALSVEGELYMLGGKHHGAL 307
            G + +LG   K   + +P   + L       VA G   + AL+  G +Y +G   +G L
Sbjct: 544 DGDKSRLGHGDKEPKL-VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQL 603

Query: 308 SDSEMLNATMSLPGDSEEDNFRPVPALSGIKVLDIAAGAEHSAIITGMVLQKDGAVKTWG 367
            +        +        +F          V +IA GA H A++T         V TWG
Sbjct: 604 GNPHADGKVPTRVDGKLHKSF----------VEEIACGAYHVAVLTSRT-----EVYTWG 663

Query: 368 WGEHGQLGLGDTCDHTNPQTVNLNLKLESTAFDVKVYCGSGFTVAVATSHAASNL 377
            G +G+LG GD  D  +P  V  +LK +       + CGS FT AV     AS +
Sbjct: 664 KGSNGRLGHGDADDRNSPTLVE-SLKDKQVK---SIACGSNFTAAVCLHKWASGM 695

[Close]
BLAST of Lsi04G004710 vs. TAIR10
Match: AT5G42140.1 (AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-29
Identity = 111/371 (29.92%), Postives = 166/371 (44.74%), Query Frame = 1 

Query: 8   EIWSWGAGTDAQLGTGRLEDDNLPQLLRTPTLSSVPAISSLSCGGAHVIALTAGIRSSST 67
           E+++WG  +  +LG G  +D   PQL+ +   +S+  ++   CG  H  A+T        
Sbjct: 292 EVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVA---CGEFHTCAVTM------- 351

Query: 68  IKGLSFMNLIVTQNPDSNSCGGVLTWGRG--NSGQLGLGDMASSLNPKPVMG-LGSYFIT 127
                               G + TWG G  N+G LG G   S   PK + G L    I 
Sbjct: 352 -------------------TGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIA 411

Query: 128 HISAGWSHSGFVSDKGKLYTCGDGSFGQLGHGDYQSRCFPDEVLFFSDKHVDQIACGMRH 187
            +S G  H+  ++  G+L+T GDG+FG LGHGD ++  +P EV   S      +ACG+ H
Sbjct: 412 SVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWH 471

Query: 188 SLALVK--------GCSGEQVYGFGAGKRGQLGISKKIQNINLPILSSELEAAEIVGVAA 247
           + A+V+          S  +++ +G G + +LG   K   +  P   S L       VA 
Sbjct: 472 AAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLK-PTCVSALIDHTFHRVAC 531

Query: 248 GGDHSAALSVEGELYMLGGKHHGALSDSEMLNATMSLPGDSEEDNFRPVPALSGIKVLDI 307
           G   +  L+  G++Y +G   +G L +    NA   LP   E+        L+   V +I
Sbjct: 532 GHSLTVGLTTSGKVYTMGSTVYGQLGNP---NADGKLPCLVED-------KLTKDCVEEI 591

Query: 308 AAGAEHSAIITGMVLQKDGAVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAFDVK 367
           A GA H A++T         V TWG G +G+LG GD  D   P  V+  LK         
Sbjct: 592 ACGAYHVAVLTSR-----NEVFTWGKGANGRLGHGDVEDRKAPTLVDA-LKERHVK---N 613

[Close]
BLAST of Lsi04G004710 vs. TAIR10
Match: AT5G63860.1 (AT5G63860.1 Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 127.5 bits (319), Expect = 1.8e-29
Identity = 100/361 (27.70%), Postives = 157/361 (43.49%), Query Frame = 1 

Query: 9   IWSWGAGTDAQLGTGRLEDDNLPQLLRTPTLSSVPAISSLSCGGAHVIALTAGIRSSSTI 68
           + SWG G D QLG G  ED   P  L   +      I S++CG  H +A           
Sbjct: 36  VCSWGRGEDGQLGHGDAEDRPSPTQL---SALDGHQIVSVTCGADHTVAY---------- 95

Query: 69  KGLSFMNLIVTQNPDSNSCGGVLTWGRGNSGQLGLGDMASSLNPKPVMGLGSYFITHISA 128
                          S S   V +WG G+ G+LG G+ +    P P+  L    I  I+ 
Sbjct: 96  ---------------SQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIAC 155

Query: 129 GWSHSGFVSDKGKLYTCGDGSFGQLGHGDYQSRCFPDEVLFFSDKHVDQIACGMRHSLAL 188
           G SH   V+ +G++ + G    GQLG GD +    P ++  F    +  +A G  H+ A+
Sbjct: 156 GDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV 215

Query: 189 VKGCSGEQVYGFGAGKRGQLGISKKIQNINLPILSSELEAAEIVGVAAGGDHSAALSVEG 248
            +      +YG+G G+ G LG+  +   + +P   +     ++  VA G  H+ ++S  G
Sbjct: 216 TE---DGDLYGWGWGRYGNLGLGDRTDRL-VPERVTSTGGEKMSMVACGWRHTISVSYSG 275

Query: 249 ELYMLGGKHHGALSDSEMLNATMSLPGDSEEDNFRP--VPALSGIKVLDIAAGAEHSAII 308
            LY  G   +G L   ++            ED+  P  + ALS   +  I+ G  H+   
Sbjct: 276 ALYTYGWSKYGQLGHGDL------------EDHLIPHKLEALSNSFISQISGGWRHT--- 335

Query: 309 TGMVLQKDGAVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAFDVKVYCGSGFTVA 368
             M L  DG +  WGW + GQ+G+G+  D  +P    + ++       V+V CG   T+A
Sbjct: 336 --MALTSDGKLYGWGWNKFGQVGVGNNLDQCSP----VQVRFPDDQKVVQVSCGWRHTLA 343

[Close]
BLAST of Lsi04G004710 vs. NCBI nr
Match: gi|778705281|ref|XP_011655664.1| (PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Cucumis sativus])

HSP 1 Score: 422.5 bits (1085), Expect = 7.5e-115
Identity = 242/381 (63.52%), Postives = 266/381 (69.82%), Query Frame = 1 

Query: 1   MEDNVEQEIWSWGAGTDAQLGTGRLEDDNLPQLLRTPTLSSVPAISSLSCGGAHVIALTA 60
           MED+VEQE+WSWGAGTDAQLGTGRLED+NLPQL+RTP+LSS PAIS LSCGGAHVIALTA
Sbjct: 7   MEDDVEQELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVIALTA 66

Query: 61  GIRSSSTIKGLSFMNLIVTQNPDSNSCGGVLTWGRGNSGQLGLGDMASSLNPKPVMGLGS 120
           G                          GGVLTWGRGNSGQLGLGDM SSL+PKPVM LGS
Sbjct: 67  G--------------------------GGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGS 126

Query: 121 YFITHISAGWSHSGFVSDKG--KLYTCGDGSFGQLGHGD-YQSRCFPDEVLFFSDKHVDQ 180
           YFITH+SAGWSHSGFVS     ++Y  G G  GQLG     Q+   P          +  
Sbjct: 127 YFITHVSAGWSHSGFVSGSSGEQVYGFGAGKRGQLGISKKIQTVNLPILSSNLEAAEIVG 186

Query: 181 IACGMRHSLALVKGCSGEQVYGFGAGKRGQLGISKKIQNINLPILSSELEAAEIVGVAAG 240
           IA G  HS AL    +   +Y +G   RG    S      +LP  SS  +      VA G
Sbjct: 187 IAAGGDHSAAL---SAEGHLYTWG---RGFKSTSDVYSPQHLPSPSSFSK------VALG 246

Query: 241 GDHSAALSVEGELYMLGGKHHGALSDSEMLNATMSLPGDSEEDNFRPVPALSGIKVLDIA 300
            +H+  L+ EGELYMLGGKHHGALSDSEMLN+  SLPGDS EDNF+ VPALSGIKVLDIA
Sbjct: 247 WNHALVLTDEGELYMLGGKHHGALSDSEMLNSMKSLPGDSREDNFQAVPALSGIKVLDIA 306

Query: 301 AGAEHSAIITGMVLQKDGAVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAFDVKV 360
           AGAEHS I+T     +DG VKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTA+DVKV
Sbjct: 307 AGAEHSVIVT-----EDGGVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAYDVKV 340

Query: 361 YCGSGFTVAVATSHAASNLPN 379
           YCGSGFTVAVAT    SNLPN
Sbjct: 367 YCGSGFTVAVAT----SNLPN 340

[Close]
BLAST of Lsi04G004710 vs. NCBI nr
Match: gi|778705277|ref|XP_011655663.1| (PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Cucumis sativus])

HSP 1 Score: 408.3 bits (1048), Expect = 1.5e-110
Identity = 220/328 (67.07%), Postives = 240/328 (73.17%), Query Frame = 1 

Query: 1   MEDNVEQEIWSWGAGTDAQLGTGRLEDDNLPQLLRTPTLSSVPAISSLSCGGAHVIALTA 60
           MED+VEQE+WSWGAGTDAQLGTGRLED+NLPQL+RTP+LSS PAIS LSCGGAHVIALTA
Sbjct: 7   MEDDVEQELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVIALTA 66

Query: 61  GIRSSSTIKGLSFMNLIVTQNPDSNSCGGVLTWGRGNSGQLGLGDMASSLNPKPVMGLGS 120
           G                          GGVLTWGRGNSGQLGLGDM SSL+PKPVM LGS
Sbjct: 67  G--------------------------GGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGS 126

Query: 121 YFITHISAGWSHSGFVSDKGKLYTCGDGSFGQLGHGDYQSRCFPDEVLFFSDKHVDQIAC 180
           YFITH+SAGWSHSGFVSD+GKLYTCGDGSFGQLGHGDYQ RCFP+EVLFFSDKHVD+IAC
Sbjct: 127 YFITHVSAGWSHSGFVSDEGKLYTCGDGSFGQLGHGDYQLRCFPEEVLFFSDKHVDKIAC 186

Query: 181 GMRHSLALVKGCSGEQVYGFGAGKRGQLGISKKIQNINLPILSSELEAAEIVGVAAGGDH 240
           GMRHSLALVKG SGEQVYGFGAGKRGQLGISKKIQ +NLPILSS LEAAEIVG+AAGGDH
Sbjct: 187 GMRHSLALVKGSSGEQVYGFGAGKRGQLGISKKIQTVNLPILSSNLEAAEIVGIAAGGDH 246

Query: 241 SAALSVEGELYMLGGKHHGALSDSEMLNATMSLPGDSEEDNFRPVPALSGIKVLDIAAGA 300
           SAALS EG LY  G    G  S S++  +   LP  S                  +A G 
Sbjct: 247 SAALSAEGHLYTWG---RGFKSTSDVY-SPQHLPSPSSFSK--------------VALGW 285

Query: 301 EHSAIITGMVLQKDGAVKTWGWGEHGQL 329
            H+     +VL  +G +   G   HG L
Sbjct: 307 NHA-----LVLTDEGELYMLGGKHHGAL 285

[Close]
BLAST of Lsi04G004710 vs. NCBI nr
Match: gi|659090975|ref|XP_008446302.1| (PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Cucumis melo])

HSP 1 Score: 406.0 bits (1042), Expect = 7.3e-110
Identity = 219/327 (66.97%), Postives = 239/327 (73.09%), Query Frame = 1 

Query: 2   EDNVEQEIWSWGAGTDAQLGTGRLEDDNLPQLLRTPTLSSVPAISSLSCGGAHVIALTAG 61
           ED+VEQE+WSWGAGTD QLGTGRLED++LPQL+RTP+LSSVPAIS LSCGGAHVIALTAG
Sbjct: 8   EDDVEQEMWSWGAGTDGQLGTGRLEDNHLPQLVRTPSLSSVPAISFLSCGGAHVIALTAG 67

Query: 62  IRSSSTIKGLSFMNLIVTQNPDSNSCGGVLTWGRGNSGQLGLGDMASSLNPKPVMGLGSY 121
                                     GGVLTWGRGNSGQLGLGDM SSL+PKPVM LGSY
Sbjct: 68  --------------------------GGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSY 127

Query: 122 FITHISAGWSHSGFVSDKGKLYTCGDGSFGQLGHGDYQSRCFPDEVLFFSDKHVDQIACG 181
            IT +SAGWSHSGFVSD+GKLYTCGDGSFGQLGHGDY  RCFPDEVLFFSDKHVDQIACG
Sbjct: 128 IITQVSAGWSHSGFVSDEGKLYTCGDGSFGQLGHGDYHLRCFPDEVLFFSDKHVDQIACG 187

Query: 182 MRHSLALVKGCSGEQVYGFGAGKRGQLGISKKIQNINLPILSSELEAAEIVGVAAGGDHS 241
           MRHSLALVKGCSGEQVYGFGAGKRGQLGISKKIQ +NLPILSSELEAAEIVG+AAGGDHS
Sbjct: 188 MRHSLALVKGCSGEQVYGFGAGKRGQLGISKKIQTVNLPILSSELEAAEIVGIAAGGDHS 247

Query: 242 AALSVEGELYMLGGKHHGALSDSEMLNATMSLPGDSEEDNFRPVPALSGIKVLDIAAGAE 301
           AALS EG LY  G    G  S+S++  +   LP  S                  +A G  
Sbjct: 248 AALSTEGHLYTWG---RGFKSNSDVY-SPQHLPSPSSFSK--------------VALGWN 285

Query: 302 HSAIITGMVLQKDGAVKTWGWGEHGQL 329
           H+     +VL  +G +   G   HG L
Sbjct: 308 HA-----LVLTDEGELYMLGGKHHGAL 285

[Close]
BLAST of Lsi04G004710 vs. NCBI nr
Match: gi|659090977|ref|XP_008446303.1| (PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Cucumis melo])

HSP 1 Score: 406.0 bits (1042), Expect = 7.3e-110
Identity = 219/327 (66.97%), Postives = 239/327 (73.09%), Query Frame = 1 

Query: 2   EDNVEQEIWSWGAGTDAQLGTGRLEDDNLPQLLRTPTLSSVPAISSLSCGGAHVIALTAG 61
           ED+VEQE+WSWGAGTD QLGTGRLED++LPQL+RTP+LSSVPAIS LSCGGAHVIALTAG
Sbjct: 8   EDDVEQEMWSWGAGTDGQLGTGRLEDNHLPQLVRTPSLSSVPAISFLSCGGAHVIALTAG 67

Query: 62  IRSSSTIKGLSFMNLIVTQNPDSNSCGGVLTWGRGNSGQLGLGDMASSLNPKPVMGLGSY 121
                                     GGVLTWGRGNSGQLGLGDM SSL+PKPVM LGSY
Sbjct: 68  --------------------------GGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSY 127

Query: 122 FITHISAGWSHSGFVSDKGKLYTCGDGSFGQLGHGDYQSRCFPDEVLFFSDKHVDQIACG 181
            IT +SAGWSHSGFVSD+GKLYTCGDGSFGQLGHGDY  RCFPDEVLFFSDKHVDQIACG
Sbjct: 128 IITQVSAGWSHSGFVSDEGKLYTCGDGSFGQLGHGDYHLRCFPDEVLFFSDKHVDQIACG 187

Query: 182 MRHSLALVKGCSGEQVYGFGAGKRGQLGISKKIQNINLPILSSELEAAEIVGVAAGGDHS 241
           MRHSLALVKGCSGEQVYGFGAGKRGQLGISKKIQ +NLPILSSELEAAEIVG+AAGGDHS
Sbjct: 188 MRHSLALVKGCSGEQVYGFGAGKRGQLGISKKIQTVNLPILSSELEAAEIVGIAAGGDHS 247

Query: 242 AALSVEGELYMLGGKHHGALSDSEMLNATMSLPGDSEEDNFRPVPALSGIKVLDIAAGAE 301
           AALS EG LY  G    G  S+S++  +   LP  S                  +A G  
Sbjct: 248 AALSTEGHLYTWG---RGFKSNSDVY-SPQHLPSPSSFSK--------------VALGWN 285

Query: 302 HSAIITGMVLQKDGAVKTWGWGEHGQL 329
           H+     +VL  +G +   G   HG L
Sbjct: 308 HA-----LVLTDEGELYMLGGKHHGAL 285

[Close]
BLAST of Lsi04G004710 vs. NCBI nr
Match: gi|659090979|ref|XP_008446304.1| (PREDICTED: ultraviolet-B receptor UVR8 isoform X3 [Cucumis melo])

HSP 1 Score: 400.2 bits (1027), Expect = 4.0e-108
Identity = 229/374 (61.23%), Postives = 259/374 (69.25%), Query Frame = 1 

Query: 2   EDNVEQEIWSWGAGTDAQLGTGRLEDDNLPQLLRTPTLSSVPAISSLSCGGAHVIALTAG 61
           ED+VEQE+WSWGAGTD QLGTGRLED++LPQL+RTP+LSSVPAIS LSCGGAHVIALTAG
Sbjct: 8   EDDVEQEMWSWGAGTDGQLGTGRLEDNHLPQLVRTPSLSSVPAISFLSCGGAHVIALTAG 67

Query: 62  IRSSSTIKGLSFMNLIVTQNPDSNSCGGVLTWGRGNSGQLGLGDMASSLNPKPVMGLGSY 121
                                     GGVLTWGRGNSGQLGLGDM SSL+PKPVM LGSY
Sbjct: 68  --------------------------GGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSY 127

Query: 122 FITHISAGWSHSGFVSDKG--KLYTCGDGSFGQLGHGD-YQSRCFPDEVLFFSDKHVDQI 181
            IT +SAGWSHSGFVS     ++Y  G G  GQLG     Q+   P          +  I
Sbjct: 128 IITQVSAGWSHSGFVSGCSGEQVYGFGAGKRGQLGISKKIQTVNLPILSSELEAAEIVGI 187

Query: 182 ACGMRHSLALVKGCSGEQVYGFGAGKRGQLGISKKIQNINLPILSSELEAAEIVGVAAGG 241
           A G  HS AL    +   +Y +G G +    +    Q++  P   S+        VA G 
Sbjct: 188 AAGGDHSAAL---STEGHLYTWGRGFKSNSDVYSP-QHLPSPSSFSK--------VALGW 247

Query: 242 DHSAALSVEGELYMLGGKHHGALSDSEMLNATMSLP-GDSEEDNFRPVPALSGIKVLDIA 301
           +H+  L+ EGELYMLGGKHHGALSDSEMLNA   LP GD +EDNF+ +PALSGIKVLDIA
Sbjct: 248 NHALVLTDEGELYMLGGKHHGALSDSEMLNAMKFLPAGDFKEDNFQAIPALSGIKVLDIA 307

Query: 302 AGAEHSAIITGMVLQKDGAVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAFDVKV 361
           AGAEHS I+T     +DG VKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTA+DVKV
Sbjct: 308 AGAEHSVIVT-----EDGGVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAYDVKV 338

Query: 362 YCGSGFTVAVATSH 372
           YCGSGFTVAVATS+
Sbjct: 368 YCGSGFTVAVATSN 338

The following BLAST results are available for this feature:
BLAST of Lsi04G004710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HERC1_HUMAN5.7e-3030.45Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2[more]
UVR8_ARATH3.1e-2827.70Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1[more]
HERC2_DROME4.1e-2828.80Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster GN=HERC2 P... [more]
HERC3_HUMAN5.3e-2831.10Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3 PE=1 SV=1[more]
HERC6_HUMAN5.9e-2733.81Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6 PE=2 SV=2[more]
BLAST of Lsi04G004710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVU0_CUCSA5.8e-10665.55Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604210 PE=4 SV=1[more]
A0A103XSI8_CYNCS2.1e-8750.00Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II OS=Cy... [more]
A0A022QIZ8_ERYGU5.6e-8547.63Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a008743mg PE=4 SV=1[more]
A0A067JES3_JATCU1.6e-7951.52Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21709 PE=4 SV=1[more]
A0A061E5D2_THECC1.1e-7748.86Regulator of chromosome condensation family protein isoform 1 OS=Theobroma cacao... [more]
BLAST of Lsi04G004710 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G27060.19.2e-6344.63 Regulator of chromosome condensation (RCC1) family protein[more]
AT5G12350.12.5e-3128.67 Regulator of chromosome condensation (RCC1) family with FYVE zinc fi... [more]
AT5G19420.21.3e-2927.95 Regulator of chromosome condensation (RCC1) family with FYVE zinc fi... [more]
AT5G42140.11.3e-2929.92 Regulator of chromosome condensation (RCC1) family with FYVE zinc fi... [more]
AT5G63860.11.8e-2927.70 Regulator of chromosome condensation (RCC1) family protein[more]
BLAST of Lsi04G004710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778705281|ref|XP_011655664.1|7.5e-11563.52PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Cucumis sativus][more]
gi|778705277|ref|XP_011655663.1|1.5e-11067.07PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Cucumis sativus][more]
gi|659090975|ref|XP_008446302.1|7.3e-11066.97PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Cucumis melo][more]
gi|659090977|ref|XP_008446303.1|7.3e-11066.97PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Cucumis melo][more]
gi|659090979|ref|XP_008446304.1|4.0e-10861.23PREDICTED: ultraviolet-B receptor UVR8 isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G004710.1Lsi04G004710.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 88..104
score: 3.7E-16coord: 126..142
score: 3.7E-16coord: 9..25
score: 3.7E-16coord: 237..255
score: 3.7E-16coord: 142..156
score: 3.7E-16coord: 310..331
score: 3.7
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 196..244
score: 1.2E-9coord: 314..367
score: 2.2E-9coord: 8..58
score: 5.7E-8coord: 88..135
score: 3.3E-12coord: 139..188
score: 6.3
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 234..244
score: -coord: 178..188
scor
IPR000408Regulator of chromosome condensation, RCC1PROFILEPS50012RCC1_3coord: 248..309
score: 8.514coord: 315..370
score: 11.77coord: 7..61
score: 13.68coord: 195..247
score: 14.806coord: 88..139
score: 14.243coord: 140..191
score: 14
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3DG3DSA:2.130.10.30coord: 7..369
score: 1.5
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIunknownSSF50985RCC1/BLIP-IIcoord: 7..60
score: 4.84E-67coord: 87..370
score: 4.84
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 2..60
score: 8.7E-129coord: 87..368
score: 8.7E
NoneNo IPR availablePANTHERPTHR22870:SF190SUBFAMILY NOT NAMEDcoord: 87..368
score: 8.7E-129coord: 2..60
score: 8.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi04G004710Csa5G604210Cucumber (Chinese Long) v2culsiB368
Lsi04G004710CSPI05G23350Wild cucumber (PI 183967)cpilsiB372
Lsi04G004710Cucsa.285430Cucumber (Gy14) v1cgylsiB465
Lsi04G004710CmaCh18G011830Cucurbita maxima (Rimu)cmalsiB379
Lsi04G004710CmoCh18G012050Cucurbita moschata (Rifu)cmolsiB364
Lsi04G004710Cla010149Watermelon (97103) v1lsiwmB312
Lsi04G004710MELO3C012059Melon (DHL92) v3.5.1lsimeB281
Lsi04G004710ClCG05G024660Watermelon (Charleston Gray)lsiwcgB283
Lsi04G004710MELO3C012059.2Melon (DHL92) v3.6.1lsimedB297
Lsi04G004710Cla97C05G106770Watermelon (97103) v2lsiwmbB284
Lsi04G004710Bhi07G001317Wax gourdlsiwgoB380
Lsi04G004710Cp4.1LG09g01440Cucurbita pepo (Zucchini)cpelsiB032
Lsi04G004710CsGy5G022850Cucumber (Gy14) v2cgyblsiB337
Lsi04G004710Carg17239Silver-seed gourdcarlsiB091
Lsi04G004710CsaV3_5G032270Cucumber (Chinese Long) v3cuclsiB393
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G004710Bottle gourd (USVL1VR-Ls)lsilsiB097
Lsi04G004710Bottle gourd (USVL1VR-Ls)lsilsiB139
Lsi04G004710Cucumber (Gy14) v1cgylsiB119
Lsi04G004710Cucurbita maxima (Rimu)cmalsiB678
Lsi04G004710Cucurbita moschata (Rifu)cmolsiB671
Lsi04G004710Cucurbita pepo (Zucchini)cpelsiB360
Lsi04G004710Wild cucumber (PI 183967)cpilsiB050
Lsi04G004710Cucumber (Chinese Long) v2culsiB051
Lsi04G004710Melon (DHL92) v3.5.1lsimeB289
Lsi04G004710Watermelon (Charleston Gray)lsiwcgB274
Lsi04G004710Watermelon (Charleston Gray)lsiwcgB304
Lsi04G004710Watermelon (97103) v1lsiwmB323
Lsi04G004710Melon (DHL92) v3.6.1lsimedB303
Lsi04G004710Melon (DHL92) v3.6.1lsimedB308
Lsi04G004710Silver-seed gourdcarlsiB764
Lsi04G004710Cucumber (Chinese Long) v3cuclsiB061
Lsi04G004710Cucumber (Chinese Long) v3cuclsiB057
Lsi04G004710Watermelon (97103) v2lsiwmbB261
Lsi04G004710Wax gourdlsiwgoB377
Lsi04G004710Wax gourdlsiwgoB408