Carg17239 (gene) Silver-seed gourd

Overview
NameCarg17239
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionultraviolet-B receptor UVR8 isoform X1
LocationCucurbita_argyrosperma_scaffold_135 : 114064 .. 116825 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGACGACGGCGAGCAAGAGATATGGAGTTGGGGGGCAGGAACCGACGGGCAGCTGGGCACCGGGCGGCTCGAGGATGAGACCCTCCCTCAACTCCTCCGGATTCCGTCACTCTCCTCTGGCGCCGTCGTCTCATCCGTGTCCTGCGGCGGCGCTCATGTCATCGCTTTGACTGCTGGTATCCGATTCTCTTCTTTCCCATCCTTTTGTTGGCCTTAATGCAAATTTCTATGAGTTCATATTAAGGTTTTCAGTTTGGTGGTAATTCAACTGGGTGCTTATGTTTTGTAAGGAGGAGGGGTGCTTACATGGGGAAGAGGCAATTCAGGGCAGTTGGGGCTAGGGGACATGGTGAGCAGCTTAGAACCTAAGCCAGTGGTGGGGTTGGAAGGCTGCTTCATAACCCATGTCTCTGCGGGATGGAGCCATTCTGGGTTTGTTTCAGGTTGGCTTATTGTTGGTTCCTTCCTTGTGAAAGCTTGGTTTACAACATGTTGTTTTCATTTTTGTGGTTTTCTGTTGTAGATGAGGGAAAGGTTTATAGTTGTGGGGATGGCTCATTTGGGCAGTTAGGACATGGGGACTTCCAGTCACGTTGCTTCCCTGATGAACTCTTGTTTTTCTCTGATAAACATGTTGATCAGATTGCATGTGGGATGCGCCACTCGCTTGCATTGGTGAAAGGTATTGAAAAGTATGTACCAACATAATCATCATTGTAATGTAATGTTTCAGTGTGAAGATTGGTTTCCTTGGATCCTCGTGTTCTTGTGATTGTACTTTTAAGCTTTTTTAAGCTTTCTGTAACCGCTGAAATCCACCGTTAGCTAATATTGTCCTTTTTAGAGCTTTCTCCTGTGGACTTCGCCTCAAGGTTATAAAACATGTATGCTAGGGGAAGTTTCCACACCCTTACATGGAATGTTTCGTTCTCCTCCCCAACGATCGGGGTCCAGCGTCCTTACTGGCACTCGTTCCCTTCTTCAATCGATGTGGGACCCCTCAATCCACCCCCTTCGAGGCCTAGTGTCCTTGCTGGCACACTGTCTCATGCCTATCCCCTTTGGGGCTCAGCCTCCTTGCACTCGTTCCTTTCTCCAATTGATGTGAGATCCCCCAATGCATACTCCTTCGAGGTCTAGTGTCCATGATATATATACAATAGTGACTTTAGGTTAAGTAGAAAATCTACCTTCGCTAACGGAACTTCCATTGTAATTACTATCTGGGGTTGGGAATCATTTTTGTATGTTTTGCCTCTCCTTTTCATTCATCAGATGAAATTATTAATCCAAGCTGTAGAGGTCGAATCTGTTGGCTTCTTAGGAAACAATGATGAATAGCTTCAACGTTCGTTGATAGCTTTCTAAGTCTTTGATTCAAAATTTGATGACGCAGGTTGTTGTGGTGCTCAAGTTTATGGATTTGGAGCTGGGAAGCGAGGTCAATTGGGCATCTCCAACAAGATTCAATCTGTTAATCTTCCCGCTCTGTCTTCAGAATTGGAAGCTGCTGAAATAGTTGGCATAGCTGCAGCTGGAGATCACAGTGCTGCGTTGTCCAGTAAGTTACATTTACAGAGTCTGTTAAGAACATTCTGCCTAACCCCTGTTAATTTCCCATCTCTTCGTTCTGTATTGGCTATTACTTTAGCTGATGGGCGTCTCTTTACGTGGGGACGAGGATTCGGAACGAATTCGGACGCATTTTCTCCTCAATATCTACCTTCACCATTGTCGTTCAGGAAAGTTGCTCTTGGATGGAACCATGCACTACTTTTAACTGGTATTGACATTCAGTTCACTTCTTATTTGGATTATGTATATGCGATGATCTTCTGCTTGTTAAGTGGCAACCATGGCTATCTTGAACAGATGAAGGGGAACTTTATATGCTTGGTGGCAAACATCACGGGACCTTGAGCGATTCTGAAAGGCTCAATGCCACGAATTCTCTGCCCGGTAATCAAATTAACTTGTCTATTTTGACTCATTAAGTAACCTTGTATAACCGCCCAAGCTCCCCGCTAGTAGATATTGTCCTCTTTAAGATTTCCCTTTCGAGCTTCCCCTCAAGGTTTTTAAAGGTTTCCACACACTTATAAATCGCACTCCTCCACTTGTCATCCACAAACTCGGTGATCCTAGAGGAAACTCGGTGATCCTTGGATGAGTTACTTGCTGATTACCACTTGATATGGGATTCTCATTGTATATCAGGCGCTACAGAGGAAGACAATTTCCGAGCAGTCTGTGGAATAAAAATCTTGGACATTGCAGCCGGGGCCGAGCATTCTGTAGTCGTTACAGGCATGGTTTTCCAAAGTTGTTGGTTAAAACCATTTAGGTGAGCCCTACTCACATGTCTAAATCTTATTGATTGCAGAGGATGGAGCTGTAAAGACATGGGGTTGGGGGGAGCATGGTCAGCTGGGTTTGGGAGACACATGTGACCACACCAACCCACAAACAGTTACTCTGCGCCACAAACTTGAGAGTGCTGCTTTCGATGTCAAAGTTTACTCTGGCAGCGGCTTTACTGTTGCCATTACAACGCCCCATGCGGCTGCAAAGCTCACCAATTGAAACTGCATGTCATTGTATGATTTTAACTGCTAATGGAATATTACATTTCACCATCACAGGCTGAAATAAAACATCAACGATTATATTGAGCTAACTGATTCCGGGGAAGTAATTGTTATCTATTTTACCTATATTTTTACATCAGCGAGAAATGCAAATACGTGGGGGAGACAG

mRNA sequence

ATGGAAGACGACGGCGAGCAAGAGATATGGAGTTGGGGGGCAGGAACCGACGGGCAGCTGGGCACCGGGCGGCTCGAGGATGAGACCCTCCCTCAACTCCTCCGGATTCCGTCACTCTCCTCTGGCGCCGTCGTCTCATCCGTGTCCTGCGGCGGCGCTCATGTCATCGCTTTGACTGCTGGAGGAGGGGTGCTTACATGGGGAAGAGGCAATTCAGGGCAGTTGGGGCTAGGGGACATGGTGAGCAGCTTAGAACCTAAGCCAGTGGTGGGGTTGGAAGGCTGCTTCATAACCCATGTCTCTGCGGGATGGAGCCATTCTGGGTTTGTTTCAGATGAGGGAAAGGTTTATAGTTGTGGGGATGGCTCATTTGGGCAGTTAGGACATGGGGACTTCCAGTCACGTTGCTTCCCTGATGAACTCTTGTTTTTCTCTGATAAACATGTTGATCAGATTGCATGTGGGATGCGCCACTCGCTTGCATTGGTGAAAGGTTGTTGTGGTGCTCAAGTTTATGGATTTGGAGCTGGGAAGCGAGGTCAATTGGGCATCTCCAACAAGATTCAATCTGTTAATCTTCCCGCTCTGTCTTCAGAATTGGAAGCTGCTGAAATAGTTGGCATAGCTGCAGCTGGAGATCACAGTGCTGCGTTGTCCAGTAAGTTACATTTACAGAGTCTGTTAAGAACATTCTGCCTAACCCCTGTTAATTTCCCATCTCTTCGTTCTGTATTGGCTATTACTTTAGCTGATGGGCGTCTCTTTACGTGGGGACGAGGATTCGGAACGAATTCGGACGCATTTTCTCCTCAATATCTACCTTCACCATTGTCGTTCAGGAAAGTTGCTCTTGGATGGAACCATGCACTACTTTTAACTGGCGCTACAGAGGAAGACAATTTCCGAGCAGTCTGTGGAATAAAAATCTTGGACATTGCAGCCGGGGCCGAGCATTCTGTAGTCGTTACAGGCATGGTTTTCCAAAAGGATGGAGCTGTAAAGACATGGGGTTGGGGGGAGCATGGTCAGCTGGGTTTGGGAGACACATGTGACCACACCAACCCACAAACAGTTACTCTGCGCCACAAACTTGAGAGTGCTGCTTTCGATGTCAAAGTTTACTCTGGCAGCGGCTTTACTGTTGCCATTACAACGCCCCATGCGGCTGCAAAGCTCACCAATTGAAACTGCATGTCATTGTATGATTTTAACTGCTAATGGAATATTACATTTCACCATCACAGGCTGAAATAAAACATCAACGATTATATTGAGCTAACTGATTCCGGGGAAGTAATTGTTATCTATTTTACCTATATTTTTACATCAGCGAGAAATGCAAATACGTGGGGGAGACAG

Coding sequence (CDS)

ATGGAAGACGACGGCGAGCAAGAGATATGGAGTTGGGGGGCAGGAACCGACGGGCAGCTGGGCACCGGGCGGCTCGAGGATGAGACCCTCCCTCAACTCCTCCGGATTCCGTCACTCTCCTCTGGCGCCGTCGTCTCATCCGTGTCCTGCGGCGGCGCTCATGTCATCGCTTTGACTGCTGGAGGAGGGGTGCTTACATGGGGAAGAGGCAATTCAGGGCAGTTGGGGCTAGGGGACATGGTGAGCAGCTTAGAACCTAAGCCAGTGGTGGGGTTGGAAGGCTGCTTCATAACCCATGTCTCTGCGGGATGGAGCCATTCTGGGTTTGTTTCAGATGAGGGAAAGGTTTATAGTTGTGGGGATGGCTCATTTGGGCAGTTAGGACATGGGGACTTCCAGTCACGTTGCTTCCCTGATGAACTCTTGTTTTTCTCTGATAAACATGTTGATCAGATTGCATGTGGGATGCGCCACTCGCTTGCATTGGTGAAAGGTTGTTGTGGTGCTCAAGTTTATGGATTTGGAGCTGGGAAGCGAGGTCAATTGGGCATCTCCAACAAGATTCAATCTGTTAATCTTCCCGCTCTGTCTTCAGAATTGGAAGCTGCTGAAATAGTTGGCATAGCTGCAGCTGGAGATCACAGTGCTGCGTTGTCCAGTAAGTTACATTTACAGAGTCTGTTAAGAACATTCTGCCTAACCCCTGTTAATTTCCCATCTCTTCGTTCTGTATTGGCTATTACTTTAGCTGATGGGCGTCTCTTTACGTGGGGACGAGGATTCGGAACGAATTCGGACGCATTTTCTCCTCAATATCTACCTTCACCATTGTCGTTCAGGAAAGTTGCTCTTGGATGGAACCATGCACTACTTTTAACTGGCGCTACAGAGGAAGACAATTTCCGAGCAGTCTGTGGAATAAAAATCTTGGACATTGCAGCCGGGGCCGAGCATTCTGTAGTCGTTACAGGCATGGTTTTCCAAAAGGATGGAGCTGTAAAGACATGGGGTTGGGGGGAGCATGGTCAGCTGGGTTTGGGAGACACATGTGACCACACCAACCCACAAACAGTTACTCTGCGCCACAAACTTGAGAGTGCTGCTTTCGATGTCAAAGTTTACTCTGGCAGCGGCTTTACTGTTGCCATTACAACGCCCCATGCGGCTGCAAAGCTCACCAATTGA

Protein sequence

MEDDGEQEIWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTAGGGVLTWGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCGDGSFGQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRGQLGISNKIQSVNLPALSSELEAAEIVGIAAAGDHSAALSSKLHLQSLLRTFCLTPVNFPSLRSVLAITLADGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALLLTGATEEDNFRAVCGIKILDIAAGAEHSVVVTGMVFQKDGAVKTWGWGEHGQLGLGDTCDHTNPQTVTLRHKLESAAFDVKVYSGSGFTVAITTPHAAAKLTN
Homology
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BLAST of Carg17239 vs. NCBI nr
Match: XP_022944970.1 (ultraviolet-B receptor UVR8 isoform X1 [Cucurbita moschata])

HSP 1 Score: 684.1 bits (1764), Expect = 2.8e-193
Identity = 352/423 (83.22%), Postives = 355/423 (83.92%), Query Frame = 0 

Query: 1   MEDDGEQEIWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTA 60
           MEDDGEQEIWSWGAGTDGQLGTGRLEDETLPQLLRI SLSSGAVVSSVSCGGAHVIALTA
Sbjct: 1   MEDDGEQEIWSWGAGTDGQLGTGRLEDETLPQLLRIASLSSGAVVSSVSCGGAHVIALTA 60

Query: 61  GGGVLTWGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCG 120
           GGGVLTWGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCG
Sbjct: 61  GGGVLTWGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCG 120

Query: 121 DGSFGQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRG 180
           DGSFGQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRG
Sbjct: 121 DGSFGQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRG 180

Query: 181 QLGISNKIQSVNLPALSSELEAAEIVGIAAAGDHSAALSSKLHLQSLLRTFCLTPVNFPS 240
           QLGISNKIQSVNLP LSSELEAAEIVGIAAAGDHSAALS+                    
Sbjct: 181 QLGISNKIQSVNLPVLSSELEAAEIVGIAAAGDHSAALST-------------------- 240

Query: 241 LRSVLAITLADGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALLLT------- 300
                     DGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHAL+LT       
Sbjct: 241 ----------DGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALVLTDEGELYM 300

Query: 301 ----------------------GATEEDNFRAVCGIKILDIAAGAEHSVVVTGMVFQKDG 360
                                 GATEEDNFRAVCGIKILDIAAGAEHS VVT     +DG
Sbjct: 301 LGGKHHGTLSDSERLNVTNSLPGATEEDNFRAVCGIKILDIAAGAEHSAVVT-----EDG 360

Query: 361 AVKTWGWGEHGQLGLGDTCDHTNPQTVTLRHKLESAAFDVKVYSGSGFTVAITTPHAAAK 395
           AVKTWGWGEHGQLGLGDTCDHTNPQTVTLR KLESAAFDVKVYSGSGFTVAITTPHAAAK
Sbjct: 361 AVKTWGWGEHGQLGLGDTCDHTNPQTVTLRRKLESAAFDVKVYSGSGFTVAITTPHAAAK 388

[Close]
BLAST of Carg17239 vs. NCBI nr
Match: XP_023542275.1 (ultraviolet-B receptor UVR8 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 679.1 bits (1751), Expect = 9.0e-192
Identity = 352/424 (83.02%), Postives = 355/424 (83.73%), Query Frame = 0 

Query: 1   MEDDGEQEIWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTA 60
           MEDDGEQEIWSWGAGTDGQLGTGRLEDET PQLLRIPSLSSGAVVSSVSCGGAHVIALTA
Sbjct: 1   MEDDGEQEIWSWGAGTDGQLGTGRLEDETRPQLLRIPSLSSGAVVSSVSCGGAHVIALTA 60

Query: 61  GGGVLTWGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCG 120
           GGGVLTWGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCG
Sbjct: 61  GGGVLTWGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCG 120

Query: 121 DGSFGQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRG 180
           DGSFGQLGHGDFQSRCFPDELLFFSDK+VDQIACGMRHSLALVKGCCGAQVYGFGAGKRG
Sbjct: 121 DGSFGQLGHGDFQSRCFPDELLFFSDKYVDQIACGMRHSLALVKGCCGAQVYGFGAGKRG 180

Query: 181 QLGISNKIQSVNLPALSSELEAAEIVGIAAAGDHSAALSSKLHLQSLLRTFCLTPVNFPS 240
           QLGISNKIQSVNLP LSS LEAAEIVGIAAAGDHSAALS+                    
Sbjct: 181 QLGISNKIQSVNLPVLSSALEAAEIVGIAAAGDHSAALST-------------------- 240

Query: 241 LRSVLAITLADGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALLLT------- 300
                     DGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALLLT       
Sbjct: 241 ----------DGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALLLTDEGELYM 300

Query: 301 ----------------------GATEEDNFRAVCGIKILDIAAGAEHSVVVTGMVFQKDG 360
                                 GATEEDNFRAVCGIKILDIAAGAEHSVVVT     +DG
Sbjct: 301 LGGKHHGTLSDSERLNATNSLPGATEEDNFRAVCGIKILDIAAGAEHSVVVT-----EDG 360

Query: 361 AVKTWGWGEHGQLGLGDTCDHTNPQTVTLRHKLES-AAFDVKVYSGSGFTVAITTPHAAA 395
           AVKTWGWGEHGQLGLGDTCDHTNPQTVTLRHKLES AAFDVKVYSGSGFTVAIT PHAAA
Sbjct: 361 AVKTWGWGEHGQLGLGDTCDHTNPQTVTLRHKLESAAAFDVKVYSGSGFTVAITRPHAAA 389

[Close]
BLAST of Carg17239 vs. NCBI nr
Match: XP_022967996.1 (ultraviolet-B receptor UVR8 [Cucurbita maxima])

HSP 1 Score: 660.6 bits (1703), Expect = 3.3e-186
Identity = 344/425 (80.94%), Postives = 350/425 (82.35%), Query Frame = 0 

Query: 1   MEDDGEQEIWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTA 60
           ++ DGEQEIWSWGAGTDGQLGTGRLEDE LPQLLRIPSLSSGAVVSSVSCGGAHVIALTA
Sbjct: 56  IDADGEQEIWSWGAGTDGQLGTGRLEDEILPQLLRIPSLSSGAVVSSVSCGGAHVIALTA 115

Query: 61  GGGVLTWGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCG 120
           GGGVLTWGRGNSGQLGLGDMVSSLEPKPV+GLEGCFITHVSAGWSHSGFVSDEGKVYSCG
Sbjct: 116 GGGVLTWGRGNSGQLGLGDMVSSLEPKPVMGLEGCFITHVSAGWSHSGFVSDEGKVYSCG 175

Query: 121 DGSFGQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRG 180
           DGSFGQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRG
Sbjct: 176 DGSFGQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRG 235

Query: 181 QLGISNKIQSVNLPALSSELEAAEIVGIAAAGDHSAALSSKLHLQSLLRTFCLTPVNFPS 240
           QLGIS KIQSVNLP LSSELEAAEIVGIAAAGDHSAALS+                    
Sbjct: 236 QLGISKKIQSVNLPVLSSELEAAEIVGIAAAGDHSAALST-------------------- 295

Query: 241 LRSVLAITLADGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALLLT------- 300
                     DGRLFTWGRGF TNSDAFSPQYLPSPLSFRKVALGWNHAL+LT       
Sbjct: 296 ----------DGRLFTWGRGFRTNSDAFSPQYLPSPLSFRKVALGWNHALVLTDEGELYM 355

Query: 301 ----------------------GATEEDNFRAV--CGIKILDIAAGAEHSVVVTGMVFQK 360
                                 GAT EDNFRAV   GIKILDIAAGAEHSVVVT     +
Sbjct: 356 LGGKHHGTLSDSEKLNATNSLPGATNEDNFRAVPAGGIKILDIAAGAEHSVVVT-----E 415

Query: 361 DGAVKTWGWGEHGQLGLGDTCDHTNPQTVTLRHKLESAAFDVKVYSGSGFTVAITTPHAA 395
           DGAVKTWGWGEHGQLGLGDTCDHTNPQTV LRHKLESA FDVKVYSGSGFTVAITTPHAA
Sbjct: 416 DGAVKTWGWGEHGQLGLGDTCDHTNPQTVFLRHKLESADFDVKVYSGSGFTVAITTPHAA 445

[Close]
BLAST of Carg17239 vs. NCBI nr
Match: XP_011655663.1 (PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Cucumis sativus])

HSP 1 Score: 554.3 bits (1427), Expect = 3.4e-154
Identity = 286/417 (68.59%), Postives = 312/417 (74.82%), Query Frame = 0 

Query: 1   MEDDGEQEIWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTA 60
           MEDD EQE+WSWGAGTD QLGTGRLED  LPQL+R PSLSS   +S +SCGGAHVIALTA
Sbjct: 7   MEDDVEQELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVIALTA 66

Query: 61  GGGVLTWGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCG 120
           GGGVLTWGRGNSGQLGLGDM+SSL PKPV+ L   FITHVSAGWSHSGFVSDEGK+Y+CG
Sbjct: 67  GGGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSYFITHVSAGWSHSGFVSDEGKLYTCG 126

Query: 121 DGSFGQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRG 180
           DGSFGQLGHGD+Q RCFP+E+LFFSDKHVD+IACGMRHSLALVKG  G QVYGFGAGKRG
Sbjct: 127 DGSFGQLGHGDYQLRCFPEEVLFFSDKHVDKIACGMRHSLALVKGSSGEQVYGFGAGKRG 186

Query: 181 QLGISNKIQSVNLPALSSELEAAEIVGIAAAGDHSAALSSKLHLQSLLRTFCLTPVNFPS 240
           QLGIS KIQ+VNLP LSS LEAAEIVGIAA GDHSAALS                     
Sbjct: 187 QLGISKKIQTVNLPILSSNLEAAEIVGIAAGGDHSAALS--------------------- 246

Query: 241 LRSVLAITLADGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALLLT------- 300
                    A+G L+TWGRGF + SD +SPQ+LPSP SF KVALGWNHAL+LT       
Sbjct: 247 ---------AEGHLYTWGRGFKSTSDVYSPQHLPSPSSFSKVALGWNHALVLTDEGELYM 306

Query: 301 ----------------------GATEEDNFRAV---CGIKILDIAAGAEHSVVVTGMVFQ 360
                                 G + EDNF+AV    GIK+LDIAAGAEHSV+VT     
Sbjct: 307 LGGKHHGALSDSEMLNSMKSLPGDSREDNFQAVPALSGIKVLDIAAGAEHSVIVT----- 366

Query: 361 KDGAVKTWGWGEHGQLGLGDTCDHTNPQTVTLRHKLESAAFDVKVYSGSGFTVAITT 386
           +DG VKTWGWGEHGQLGLGDTCDHTNPQTV L  KLES A+DVKVY GSGFTVA+ T
Sbjct: 367 EDGGVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAYDVKVYCGSGFTVAVAT 388

[Close]
BLAST of Carg17239 vs. NCBI nr
Match: XP_008446303.1 (PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Cucumis melo])

HSP 1 Score: 553.5 bits (1425), Expect = 5.7e-154
Identity = 286/416 (68.75%), Postives = 312/416 (75.00%), Query Frame = 0 

Query: 2   EDDGEQEIWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTAG 61
           EDD EQE+WSWGAGTDGQLGTGRLED  LPQL+R PSLSS   +S +SCGGAHVIALTAG
Sbjct: 8   EDDVEQEMWSWGAGTDGQLGTGRLEDNHLPQLVRTPSLSSVPAISFLSCGGAHVIALTAG 67

Query: 62  GGVLTWGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCGD 121
           GGVLTWGRGNSGQLGLGDM+SSL PKPV+ L    IT VSAGWSHSGFVSDEGK+Y+CGD
Sbjct: 68  GGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSYIITQVSAGWSHSGFVSDEGKLYTCGD 127

Query: 122 GSFGQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRGQ 181
           GSFGQLGHGD+  RCFPDE+LFFSDKHVDQIACGMRHSLALVKGC G QVYGFGAGKRGQ
Sbjct: 128 GSFGQLGHGDYHLRCFPDEVLFFSDKHVDQIACGMRHSLALVKGCSGEQVYGFGAGKRGQ 187

Query: 182 LGISNKIQSVNLPALSSELEAAEIVGIAAAGDHSAALSSKLHLQSLLRTFCLTPVNFPSL 241
           LGIS KIQ+VNLP LSSELEAAEIVGIAA GDHSAALS+                     
Sbjct: 188 LGISKKIQTVNLPILSSELEAAEIVGIAAGGDHSAALST--------------------- 247

Query: 242 RSVLAITLADGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALLLT-------- 301
                    +G L+TWGRGF +NSD +SPQ+LPSP SF KVALGWNHAL+LT        
Sbjct: 248 ---------EGHLYTWGRGFKSNSDVYSPQHLPSPSSFSKVALGWNHALVLTDEGELYML 307

Query: 302 ---------------------GATEEDNFRAV---CGIKILDIAAGAEHSVVVTGMVFQK 361
                                G  +EDNF+A+    GIK+LDIAAGAEHSV+VT     +
Sbjct: 308 GGKHHGALSDSEMLNAMKFLPGDFKEDNFQAIPALSGIKVLDIAAGAEHSVIVT-----E 367

Query: 362 DGAVKTWGWGEHGQLGLGDTCDHTNPQTVTLRHKLESAAFDVKVYSGSGFTVAITT 386
           DG VKTWGWGEHGQLGLGDTCDHTNPQTV L  KLES A+DVKVY GSGFTVA+ T
Sbjct: 368 DGGVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAYDVKVYCGSGFTVAVAT 388

[Close]
BLAST of Carg17239 vs. TAIR10
Match: AT1G27060.1 (Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 365.2 bits (936), Expect = 5.2e-101
Identity = 204/408 (50.00%), Postives = 264/408 (64.71%), Query Frame = 0 

Query: 2   EDDGEQEIWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTAG 61
           +++ E+++WSWGAGTDGQLGT +L+DE LPQLL + SL S   +S ++CGGAHVIALT+G
Sbjct: 10  DEEEEEQVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPS---ISMLACGGAHVIALTSG 69

Query: 62  GGVLTWGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCGD 121
           G V TWGRG+SGQLG GD+++   PK V   +   IT  +AGWSHSGFVSD G +++CG+
Sbjct: 70  GKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGN 129

Query: 122 GSFGQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRGQ 181
           GSFGQLGHGD  S   P ++  F++  V  +ACGMRHSL L     G QV GFG+GKRGQ
Sbjct: 130 GSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLF---AGNQVCGFGSGKRGQ 189

Query: 182 LGI-SNKIQSVNLPALSSELEAAEIVGIAAAGDHSAALSSKLHLQSLLRTFCLTPVNFPS 241
           LG  S++I+SVNLP + S L+  E+V I+A GDHSAA+S                     
Sbjct: 190 LGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAIS--------------------- 249

Query: 242 LRSVLAITLADGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALLLT------- 301
                    ADG+ F+WGRGF    D  +PQ LPSPLSFR+VA+GWNHALLLT       
Sbjct: 250 ---------ADGQFFSWGRGFCGGPDVHAPQSLPSPLSFREVAVGWNHALLLTVDGEVFK 309

Query: 302 -GAT----------EEDNFRAVC-------GIKILDIAAGAEHSVVVTGMVFQKDGAVKT 361
            G+T          + D+  A+        G+K++ IAAGAEHS  VT     ++G VKT
Sbjct: 310 LGSTLNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVT-----ENGEVKT 369

Query: 362 WGWGEHGQLGLGDTCDHTNPQTVTLRHKLESAAFDVKVYSGSGFTVAI 384
           WGWGEHGQLGLG+T D T+P+ V+L   ++    ++KVY GSGFT A+
Sbjct: 370 WGWGEHGQLGLGNTNDQTSPELVSL-GSIDLRTKEIKVYCGSGFTYAV 375

[Close]
BLAST of Carg17239 vs. TAIR10
Match: AT5G63860.1 (Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-28
Identity = 72/216 (33.33%), Postives = 112/216 (51.85%), Query Frame = 0 

Query: 6   EQEIWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTAGGGVL 65
           E E+ SWG   +GQLG G  ED  +PQ ++      G  +  V+ G  H  A+T  G + 
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ---AFEGIRIKMVAAGAEHTAAVTEDGDLY 197

Query: 66  TWGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCGDGSFG 125
            WG G  G LGLGD    L P+ V    G  ++ V+ GW H+  VS  G +Y+ G   +G
Sbjct: 198 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 257

Query: 126 QLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRGQLGIS 185
           QLGHGD +    P +L   S+  + QI+ G RH++AL       ++YG+G  K GQ+G+ 
Sbjct: 258 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTS---DGKLYGWGWNKFGQVGVG 317

Query: 186 NKIQSVNLPALSSELEAAEIVGIAAAGDHSAALSSK 222
           N +   + P      +  ++V ++    H+ A++ +
Sbjct: 318 NNLDQCS-PVQVRFPDDQKVVQVSCGWRHTLAVTER 346

[Close]
BLAST of Carg17239 vs. TAIR10
Match: AT5G12350.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-26
Identity = 109/387 (28.17%), Postives = 171/387 (44.19%), Query Frame = 0 

Query: 8   EIWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTAGGGVLTW 67
           E +SWG  ++G+LG G   D  + Q   I +L++   +  V+CG  H  A+T  G + TW
Sbjct: 328 ESFSWGEESEGRLGHG--VDSNIQQPKLIDALNT-TNIELVACGEFHSCAVTLSGDLYTW 387

Query: 68  GRGNSGQLGLGDMVSSLEPKPV-VGLEGCFITHVSAGWSHSGFVSDEGKVYSCGDGSFGQ 127
           G+G+ G LG G+ VS   PK V   LEG  ++ ++ G  H+  V+  G++++ GDG+FG 
Sbjct: 388 GKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGV 447

Query: 128 LGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVK---------GCCGAQVYGFGAG 187
           LGHGD +S   P E+         + ACG+ H+ A+V+          C   +++ +G G
Sbjct: 448 LGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 507

Query: 188 KRGQLGISNKIQSVNLPALSSELEAAEIVGIAAAGDHSAALSSKLHLQSLLRTFCLTPVN 247
            +G+LG  NK   + +P   + L       +A     + AL++                 
Sbjct: 508 DKGRLGHGNKEPKL-VPTCVAALVEPNFCQVACGHSLTVALTT----------------- 567

Query: 248 FPSLRSVLAITLADGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALLLTGATE 307
                         G ++T G          SP Y           LG +HA    G T 
Sbjct: 568 -------------SGHVYTMG----------SPVY---------GQLGNSHA---DGKTP 627

Query: 308 EDNFRAVCGIKILDIAAGAEHSVVVTGMVFQKDGAVKTWGWGEHGQLGLGDTCDHTNPQT 367
                 +    + +IA GA H  V+T         V TWG G +G+LG GD  D  +P  
Sbjct: 628 NRVEGKLHKSFVEEIACGAYHVAVLTSRT-----EVYTWGKGSNGRLGHGDVDDRNSPTL 648

Query: 368 V-TLRHKLESAAFDVKVYSGSGFTVAI 384
           V +L+ K   +     +  G+ FT A+
Sbjct: 688 VESLKDKQVKS-----IACGTNFTAAV 648

[Close]
BLAST of Carg17239 vs. TAIR10
Match: AT3G47660.1 (Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-26
Identity = 108/383 (28.20%), Postives = 164/383 (42.82%), Query Frame = 0 

Query: 8   EIWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTAGGGVLTW 67
           +++SWG  + G+LG G       P+L+      +G+ V    CG  H  A+TA G +  W
Sbjct: 319 QMYSWGEESGGRLGHGVCSYVPHPKLI---DEFNGSTVELADCGEFHTCAVTASGDLYAW 378

Query: 68  GRG--NSGQLGLGDMVSSLEPKPVVG-LEGCFITHVSAGWSHSGFVSDEGKVYSCGDGSF 127
           G G  N+G LGLG   S  +P  ++G +EG ++  +S G  H+ FV+ EGK+++ GDG+F
Sbjct: 379 GDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTF 438

Query: 128 GQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALV----KGCCGAQVYGFGAGKRG 187
           G LGHGD  S   P E+   +     + ACG+ HS A+V    +     +++ +G G  G
Sbjct: 439 GALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDG 498

Query: 188 QLGISNKIQSVNLPALSSELEAAEIVGIAAAGDHSAALSSKLHLQSLLRTFCLTPVNFPS 247
           +LG    I+   +P+  +EL+      +A     + ALS    + ++           PS
Sbjct: 499 RLG-HGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQVYAM-------GTADPS 558

Query: 248 LRSVLAITLADGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALLLTGATEEDN 307
              V A +  +G L   G+ F                  ++VA G++H  +L    E   
Sbjct: 559 HDIVRAPSCIEGGL---GKSF-----------------VQEVACGFHHIAVLNSKAE--- 618

Query: 308 FRAVCGIKILDIAAGAEHSVVVTGMVFQKDGAVKTWGWGEHGQLGLGDTCDHTNPQTVTL 367
                                           V TWG G +GQLG GDT     P  V  
Sbjct: 619 --------------------------------VYTWGKGSNGQLGHGDTEYRCMPTLV-- 631

Query: 368 RHKLESAAFDVKVYSGSGFTVAI 384
             K        KV  GS +T  I
Sbjct: 679 --KALKGKQVRKVVCGSNYTATI 631

[Close]
BLAST of Carg17239 vs. TAIR10
Match: AT3G23270.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 115.9 bits (289), Expect = 5.5e-26
Identity = 111/389 (28.53%), Postives = 168/389 (43.19%), Query Frame = 0 

Query: 8   EIWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTAGGGVLTW 67
           E+++WG    G+LG G   D + P+L+   +L++   +  V+CG  H   ++  G + +W
Sbjct: 271 EVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTN---IDFVACGEYHTCVVSTSGDLFSW 330

Query: 68  GRG--NSGQLGLGDMVSSLEPKPVVG-LEGCFITHVSAGWSHSGFVSDEGKVYSCGDGSF 127
           G G  N G LG G  +S   PK V G LEG  +  V+ G  HS   +  GK+++ GDG+F
Sbjct: 331 GDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAF 390

Query: 128 GQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVK-------GCCGAQVYGFGAG 187
           G LGHG+ +S  +P E+   +     ++AC + H+ A+V+            +++ +G G
Sbjct: 391 GVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDG 450

Query: 188 KRGQLGISNKIQSVNLPALSSELEAAEIVGIAAAGDHSAALSSKLHLQSLLRTFCLTPVN 247
            + +LG  NK ++  LP   S L       IA     + AL++                 
Sbjct: 451 DKNRLGHGNK-ETYLLPTCVSSLIDYNFHKIACGHTFTVALTT----------------- 510

Query: 248 FPSLRSVLAITLADGRLFTW-GRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALLLTGAT 307
                         G +FT  G   G   ++ S   LP  +  R V              
Sbjct: 511 -------------SGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLV-------------- 570

Query: 308 EEDNFRAVCGIKILDIAAGAEHSVVVTGMVFQKDGAVKTWGWGEHGQLGLGDTCDHTNPQ 367
                    G  + +IA GA H  V+T         V TWG G +G+LG GDT D   P 
Sbjct: 571 ---------GEFVEEIACGAHHVAVLTSR-----SEVFTWGKGANGRLGHGDTEDKRTPT 591

Query: 368 TV-TLRHKLESAAFDVKVYS-GSGFTVAI 384
            V  LR +       VK  S GS FT +I
Sbjct: 631 LVEALRDR------HVKSLSCGSNFTSSI 591

[Close]
BLAST of Carg17239 vs. Swiss-Prot
Match: sp|Q15751|HERC1_HUMAN (Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 3.7e-27
Identity = 99/350 (28.29%), Postives = 153/350 (43.71%), Query Frame = 0 

Query: 13   GAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSV--SCGG-AHVIALTAGGGVLTWGR 72
            G G+ G+LG G  +D     +L + S   G VV+ +  SCG   H +ALT  G V +WG 
Sbjct: 4052 GEGSYGRLGQGNSDD---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4111

Query: 73   GNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCGDGSFGQLGH 132
            G+ G+LG G+      P+ +  L+G  +  +S G+ HS  V+ +GK+++ G+G +G+LG 
Sbjct: 4112 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4171

Query: 133  GDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRGQLGISNKIQ 192
            G+  ++  P+ +       + Q+ACG+ H+LA+     G+ V+ FG G  G+LG+ N   
Sbjct: 4172 GNTSNKKLPERVTALEGYQIGQVACGLNHTLAV--SADGSMVWAFGDGDYGKLGLGNS-T 4231

Query: 193  SVNLPALSSELEAAEIVGIAAAGDHSAALSSKLHLQSLLRTFCLTPVNFPSLRSVLAITL 252
            + + P     L    I  +A     S AL+   H+                       T 
Sbjct: 4232 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHV----------------------YTF 4291

Query: 253  ADGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALLLTGATEEDNFRAVCGIKI 312
               RL     G   N +   PQ +P                             + G+ I
Sbjct: 4292 GQDRLIGLPEGRARNHN--RPQQIP----------------------------VLAGVII 4338

Query: 313  LDIAAGAEHSVVVTGMVFQKDGAVKTWGWGEHGQLGLGDTCDHTNPQTVT 360
             D+A GAEH++ +       +G V  WG    GQLGLG T     P  VT
Sbjct: 4352 EDVAVGAEHTLALA-----SNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338

[Close]
BLAST of Carg17239 vs. Swiss-Prot
Match: sp|Q9FN03|UVR8_ARATH (Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.7e-27
Identity = 72/216 (33.33%), Postives = 112/216 (51.85%), Query Frame = 0 

Query: 6   EQEIWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTAGGGVL 65
           E E+ SWG   +GQLG G  ED  +PQ ++      G  +  V+ G  H  A+T  G + 
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ---AFEGIRIKMVAAGAEHTAAVTEDGDLY 197

Query: 66  TWGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCGDGSFG 125
            WG G  G LGLGD    L P+ V    G  ++ V+ GW H+  VS  G +Y+ G   +G
Sbjct: 198 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 257

Query: 126 QLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRGQLGIS 185
           QLGHGD +    P +L   S+  + QI+ G RH++AL       ++YG+G  K GQ+G+ 
Sbjct: 258 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTS---DGKLYGWGWNKFGQVGVG 317

Query: 186 NKIQSVNLPALSSELEAAEIVGIAAAGDHSAALSSK 222
           N +   + P      +  ++V ++    H+ A++ +
Sbjct: 318 NNLDQCS-PVQVRFPDDQKVVQVSCGWRHTLAVTER 346

[Close]
BLAST of Carg17239 vs. Swiss-Prot
Match: sp|Q3MHW0|SRGEF_BOVIN (Secretion-regulating guanine nucleotide exchange factor OS=Bos taurus OX=9913 GN=SERGEF PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.2e-25
Identity = 109/385 (28.31%), Postives = 158/385 (41.04%), Query Frame = 0 

Query: 9   IWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTAGGGVLTWG 68
           +++WGA + GQLG G  ED    Q  ++        +  ++ GG H   +T  G +   G
Sbjct: 17  LFAWGANSYGQLGLGHKEDVLSAQ--QLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCG 76

Query: 69  RGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCGDGSFGQLG 128
               GQLGLG     L   P   L GC I  V+ GW  +  +++ G+V SCG  SFGQLG
Sbjct: 77  LNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLG 136

Query: 129 HGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRGQLGISNKI 188
                 RC   + +    + V  IA G+RH+LA        Q +G G    G+     + 
Sbjct: 137 VPHGPRRCVIPQAIELLREKVVSIAAGLRHALAATASGTVFQ-WGTGLASSGRRLCPGQT 196

Query: 189 QSVNL----PALSSELEAAEIVGIAAAGDHSAAL----------SSKLHLQSLLRTFCLT 248
             + L    P+  + LE ++ V + A  DHSA+L          S+K    +    F L 
Sbjct: 197 LPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLL 256

Query: 249 PVNFPS-------LRSV------LAITLADGRLFTWGRG-FG------TNSDAFSPQYLP 308
           P    +       + +V      L      G++FTWGR  +G         + +  +   
Sbjct: 257 PQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQD 316

Query: 309 SPLSFRKVALGWNHAL-LLTGATEEDNFRAVCGIKILDIAAGAEHSVVVTGMVFQKDGAV 359
             L       G    L  LTGATE              I+ G+EH++ V G      G  
Sbjct: 317 PSLPGSGPQKGTPSCLPCLTGATE--------------ISCGSEHNLAVIG------GVC 376

[Close]
BLAST of Carg17239 vs. Swiss-Prot
Match: sp|Q9UGK8|SRGEF_HUMAN (Secretion-regulating guanine nucleotide exchange factor OS=Homo sapiens OX=9606 GN=SERGEF PE=1 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 3.4e-25
Identity = 105/385 (27.27%), Postives = 155/385 (40.26%), Query Frame = 0 

Query: 9   IWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTAGGGVLTWG 68
           +++WGA + GQLG G  ED  LPQ L          V  ++ GG H   +T GG +   G
Sbjct: 17  LFAWGANSYGQLGLGHKEDVLLPQQLN--DFCKPRSVRRITGGGGHSAVVTDGGDLFVCG 76

Query: 69  RGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCGDGSFGQLG 128
               GQLGLG         P   L GC I  V+ GW  +  +++ G+V SCG  SFGQLG
Sbjct: 77  LNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLG 136

Query: 129 HGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRGQLGISNK- 188
                 RC   + +    + V  IA G+RH++A        Q +G G    G+     + 
Sbjct: 137 VPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQ-WGTGLASCGRRLCPGQT 196

Query: 189 ---IQSVNLPALSSELEAAEIVGIAAAGDHSAALSSK--------------------LHL 248
                +   P+  + LE ++ + + A  DHSA+L+                      L +
Sbjct: 197 LPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPV 256

Query: 249 QSLLRTFCLTPVNFPSLRS---VLAITLADGRLFTWGRG----FGTNSDAFSPQYLPSPL 308
              +   C       ++ S    L      G++FTWGR      G   + +    L    
Sbjct: 257 PQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQD 316

Query: 309 SFRKVALGWN----HALLLTGATEEDNFRAVCGIKILDIAAGAEHSVVVTGMVFQKDGAV 359
           SF   +   N        LTGATE              ++ G+EH++ + G      G  
Sbjct: 317 SFLPCSRPPNSMPSSPHCLTGATE--------------VSCGSEHNLAIIG------GVC 376

[Close]
BLAST of Carg17239 vs. Swiss-Prot
Match: sp|Q9UII4|HERC5_HUMAN (E3 ISG15--protein ligase HERC5 OS=Homo sapiens OX=9606 GN=HERC5 PE=1 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 2.2e-24
Identity = 71/200 (35.50%), Postives = 106/200 (53.00%), Query Frame = 0 

Query: 8   EIWSWGAGTDGQLGTGR-LEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTAGGGVLT 67
           E+++WG    GQLG GR     T PQ++      +G  ++ +S G AH +AL+  G + +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIV---EHLAGVPLAQISAGEAHSMALSMSGNIYS 217

Query: 68  WGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCGDGSFGQ 127
           WG+   GQLGLG   S  +P  + GL+   +  V+ G SHS  ++ +G +++ G G  GQ
Sbjct: 218 WGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ 277

Query: 128 LGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRGQLGI-S 187
           LGH   Q+   P  +       V QIACG  H+LA V      +V+ FG+GK GQLG   
Sbjct: 278 LGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDL--GKVFSFGSGKDGQLGNGG 337

Query: 188 NKIQSVNLPALSSELEAAEI 206
            + Q + LP   S  E  ++
Sbjct: 338 TRDQLMPLPVKVSSSEELKL 352

[Close]
BLAST of Carg17239 vs. TrEMBL
Match: tr|A0A1S3BER2|A0A1S3BER2_CUCME (ultraviolet-B receptor UVR8 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489079 PE=4 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 3.8e-154
Identity = 286/416 (68.75%), Postives = 312/416 (75.00%), Query Frame = 0 

Query: 2   EDDGEQEIWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTAG 61
           EDD EQE+WSWGAGTDGQLGTGRLED  LPQL+R PSLSS   +S +SCGGAHVIALTAG
Sbjct: 8   EDDVEQEMWSWGAGTDGQLGTGRLEDNHLPQLVRTPSLSSVPAISFLSCGGAHVIALTAG 67

Query: 62  GGVLTWGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCGD 121
           GGVLTWGRGNSGQLGLGDM+SSL PKPV+ L    IT VSAGWSHSGFVSDEGK+Y+CGD
Sbjct: 68  GGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSYIITQVSAGWSHSGFVSDEGKLYTCGD 127

Query: 122 GSFGQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRGQ 181
           GSFGQLGHGD+  RCFPDE+LFFSDKHVDQIACGMRHSLALVKGC G QVYGFGAGKRGQ
Sbjct: 128 GSFGQLGHGDYHLRCFPDEVLFFSDKHVDQIACGMRHSLALVKGCSGEQVYGFGAGKRGQ 187

Query: 182 LGISNKIQSVNLPALSSELEAAEIVGIAAAGDHSAALSSKLHLQSLLRTFCLTPVNFPSL 241
           LGIS KIQ+VNLP LSSELEAAEIVGIAA GDHSAALS+                     
Sbjct: 188 LGISKKIQTVNLPILSSELEAAEIVGIAAGGDHSAALST--------------------- 247

Query: 242 RSVLAITLADGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALLLT-------- 301
                    +G L+TWGRGF +NSD +SPQ+LPSP SF KVALGWNHAL+LT        
Sbjct: 248 ---------EGHLYTWGRGFKSNSDVYSPQHLPSPSSFSKVALGWNHALVLTDEGELYML 307

Query: 302 ---------------------GATEEDNFRAV---CGIKILDIAAGAEHSVVVTGMVFQK 361
                                G  +EDNF+A+    GIK+LDIAAGAEHSV+VT     +
Sbjct: 308 GGKHHGALSDSEMLNAMKFLPGDFKEDNFQAIPALSGIKVLDIAAGAEHSVIVT-----E 367

Query: 362 DGAVKTWGWGEHGQLGLGDTCDHTNPQTVTLRHKLESAAFDVKVYSGSGFTVAITT 386
           DG VKTWGWGEHGQLGLGDTCDHTNPQTV L  KLES A+DVKVY GSGFTVA+ T
Sbjct: 368 DGGVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAYDVKVYCGSGFTVAVAT 388

[Close]
BLAST of Carg17239 vs. TrEMBL
Match: tr|A0A1S3BEQ9|A0A1S3BEQ9_CUCME (ultraviolet-B receptor UVR8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489079 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 4.9e-154
Identity = 286/417 (68.59%), Postives = 312/417 (74.82%), Query Frame = 0 

Query: 2   EDDGEQEIWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTAG 61
           EDD EQE+WSWGAGTDGQLGTGRLED  LPQL+R PSLSS   +S +SCGGAHVIALTAG
Sbjct: 8   EDDVEQEMWSWGAGTDGQLGTGRLEDNHLPQLVRTPSLSSVPAISFLSCGGAHVIALTAG 67

Query: 62  GGVLTWGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCGD 121
           GGVLTWGRGNSGQLGLGDM+SSL PKPV+ L    IT VSAGWSHSGFVSDEGK+Y+CGD
Sbjct: 68  GGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSYIITQVSAGWSHSGFVSDEGKLYTCGD 127

Query: 122 GSFGQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRGQ 181
           GSFGQLGHGD+  RCFPDE+LFFSDKHVDQIACGMRHSLALVKGC G QVYGFGAGKRGQ
Sbjct: 128 GSFGQLGHGDYHLRCFPDEVLFFSDKHVDQIACGMRHSLALVKGCSGEQVYGFGAGKRGQ 187

Query: 182 LGISNKIQSVNLPALSSELEAAEIVGIAAAGDHSAALSSKLHLQSLLRTFCLTPVNFPSL 241
           LGIS KIQ+VNLP LSSELEAAEIVGIAA GDHSAALS+                     
Sbjct: 188 LGISKKIQTVNLPILSSELEAAEIVGIAAGGDHSAALST--------------------- 247

Query: 242 RSVLAITLADGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALLLT-------- 301
                    +G L+TWGRGF +NSD +SPQ+LPSP SF KVALGWNHAL+LT        
Sbjct: 248 ---------EGHLYTWGRGFKSNSDVYSPQHLPSPSSFSKVALGWNHALVLTDEGELYML 307

Query: 302 ----------------------GATEEDNFRAV---CGIKILDIAAGAEHSVVVTGMVFQ 361
                                 G  +EDNF+A+    GIK+LDIAAGAEHSV+VT     
Sbjct: 308 GGKHHGALSDSEMLNAMKFLPAGDFKEDNFQAIPALSGIKVLDIAAGAEHSVIVT----- 367

Query: 362 KDGAVKTWGWGEHGQLGLGDTCDHTNPQTVTLRHKLESAAFDVKVYSGSGFTVAITT 386
           +DG VKTWGWGEHGQLGLGDTCDHTNPQTV L  KLES A+DVKVY GSGFTVA+ T
Sbjct: 368 EDGGVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAYDVKVYCGSGFTVAVAT 389

[Close]
BLAST of Carg17239 vs. TrEMBL
Match: tr|A0A0A0KVU0|A0A0A0KVU0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604210 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 5.1e-151
Identity = 283/417 (67.87%), Postives = 309/417 (74.10%), Query Frame = 0 

Query: 1   MEDDGEQEIWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTA 60
           MEDD EQE+WSWGAGTD QLGTGRLED  LPQL+R PSLSS   +S +SCGGAHVIALTA
Sbjct: 7   MEDDVEQELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVIALTA 66

Query: 61  GGGVLTWGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCG 120
           GGGVLTWGRGNSGQLGLGDM+SSL PKPV+ L   FITHVSAGWSHSGFVSDEGK+Y+CG
Sbjct: 67  GGGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSYFITHVSAGWSHSGFVSDEGKLYTCG 126

Query: 121 DGSFGQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRG 180
           DGSFGQLGHGD+Q RCFP+E+LFFSDKHVD+IACGMRHSLALVK      VYGFGAGKRG
Sbjct: 127 DGSFGQLGHGDYQLRCFPEEVLFFSDKHVDKIACGMRHSLALVK------VYGFGAGKRG 186

Query: 181 QLGISNKIQSVNLPALSSELEAAEIVGIAAAGDHSAALSSKLHLQSLLRTFCLTPVNFPS 240
           QLGIS KIQ+VNLP LSS LEAAEIVGIAA GDHSAALS                     
Sbjct: 187 QLGISKKIQTVNLPILSSNLEAAEIVGIAAGGDHSAALS--------------------- 246

Query: 241 LRSVLAITLADGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALLLT------- 300
                    A+G L+TWGRGF + SD +SPQ+LPSP SF KVALGWNHAL+LT       
Sbjct: 247 ---------AEGHLYTWGRGFKSTSDVYSPQHLPSPSSFSKVALGWNHALVLTDEGELYM 306

Query: 301 ----------------------GATEEDNFRAV---CGIKILDIAAGAEHSVVVTGMVFQ 360
                                 G + EDNF+AV    GIK+LDIAAGAEHSV+VT     
Sbjct: 307 LGGKHHGALSDSEMLNSMKSLPGDSREDNFQAVPALSGIKVLDIAAGAEHSVIVT----- 366

Query: 361 KDGAVKTWGWGEHGQLGLGDTCDHTNPQTVTLRHKLESAAFDVKVYSGSGFTVAITT 386
           +DG VKTWGWGEHGQLGLGDTCDHTNPQTV L  KLES A+DVKVY GSGFTVA+ T
Sbjct: 367 EDGGVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAYDVKVYCGSGFTVAVAT 382

[Close]
BLAST of Carg17239 vs. TrEMBL
Match: tr|A0A061E5H3|A0A061E5H3_THECC (Regulator of chromosome condensation family protein isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_009957 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.2e-113
Identity = 218/411 (53.04%), Postives = 269/411 (65.45%), Query Frame = 0 

Query: 6   EQEIWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTAGGGVL 65
           E+++WSWGAGTDGQLGT RL+DE LPQLL +PSLSS   VS ++CGGAHV+ALT GG VL
Sbjct: 21  EEQLWSWGAGTDGQLGTARLQDEHLPQLLNLPSLSSAGPVSILACGGAHVVALTYGGKVL 80

Query: 66  TWGRGNSGQLGLGDMVSS-LEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCGDGSF 125
           TWGRGNSGQLG G+MV++ L PKPV+ LE  FIT VSAGWSHSGFVSDEG  ++CGDGSF
Sbjct: 81  TWGRGNSGQLGHGEMVNTLLAPKPVMSLESYFITQVSAGWSHSGFVSDEGCAFTCGDGSF 140

Query: 126 GQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRGQLGI 185
           GQLGHGD++S C P ++ FF +KHV+QIACGMRHSL L+K   G Q+YGFG+GKRGQLG+
Sbjct: 141 GQLGHGDYRSHCSPVKVSFFVNKHVEQIACGMRHSLVLLKDNSGNQLYGFGSGKRGQLGV 200

Query: 186 -SNKIQSVNLPALSSELEAAEIVGIAAAGDHSAALSSKLHLQSLLRTFCLTPVNFPSLRS 245
             ++I+S+N P  +   +  +I+ I A GDHSAALS                        
Sbjct: 201 PMDRIKSINTPQFTCGFDDVKIISIGANGDHSAALS------------------------ 260

Query: 246 VLAITLADGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALL------------ 305
                 A+G+L+ WGRGFG  SD   PQ++PSPL   K  LGWNHAL+            
Sbjct: 261 ------AEGQLYIWGRGFGATSDFLIPQHIPSPL-LSKAVLGWNHALILSDDGEVYMLGG 320

Query: 306 -----------------LTGATEEDNFRAVCGIKILDIAAGAEHSVVVTGMVFQKDGAVK 365
                            L+GA   +    + G+K++ IAAGAEHS ++T     +DG +K
Sbjct: 321 SHHGVLSNPEKMNPSKHLSGAAVLERVPGLDGMKVVQIAAGAEHSAIIT-----EDGVIK 380

Query: 366 TWGWGEHGQLGLGDTCDHTNPQTVTLRHKLESAAFDVKVYSGSGFTVAITT 386
           TWGWGEHGQLGLG TCD   PQTV+L H +E      +VY GSGFT AI T
Sbjct: 381 TWGWGEHGQLGLGSTCDQNIPQTVSLGHDIEHNDATFRVYCGSGFTYAIRT 395

[Close]
BLAST of Carg17239 vs. TrEMBL
Match: tr|A0A2P5FQG6|A0A2P5FQG6_9ROSA (Regulator of chromosome condensation OS=Trema orientalis OX=63057 GN=TorRG33x02_041630 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 8.0e-112
Identity = 219/422 (51.90%), Postives = 275/422 (65.17%), Query Frame = 0 

Query: 2   EDDGEQEIWSWGAGTDGQLGTGRLEDETLPQLLRIPSLSSGAVVSSVSCGGAHVIALTAG 61
           +++ +QEIWSWGAGTDGQLGTGRL+DE LPQLL +PSLSS   +S ++CGGAHVI LT+G
Sbjct: 17  DEEVKQEIWSWGAGTDGQLGTGRLQDELLPQLLGLPSLSSSGPISLLACGGAHVIGLTSG 76

Query: 62  GGVLTWGRGNSGQLGLGDMVSSLEPKPVVGLEGCFITHVSAGWSHSGFVSDEGKVYSCGD 121
           G V+TWGRG SGQLG GD  +S  PK V+ LE  F++HVSAGW+HSGFVSD G +++CGD
Sbjct: 77  GRVVTWGRGTSGQLGHGDTRNSPNPKLVILLESHFVSHVSAGWNHSGFVSDTGSLFTCGD 136

Query: 122 GSFGQLGHGDFQSRCFPDELLFFSDKHVDQIACGMRHSLALVKGCCGAQVYGFGAGKRGQ 181
           GSFGQLGHGD++S   P ++ +F + HV Q+ACGMRHSL L+K   G  +Y FG+GKRGQ
Sbjct: 137 GSFGQLGHGDYKSHSSPVKVSYFVNSHVQQMACGMRHSLVLLKDHSGDPIYAFGSGKRGQ 196

Query: 182 LGIS-NKIQSVNLPALSSELEAAEIVGIAAAGDHSAALSSKLHLQSLLRTFCLTPVNFPS 241
           LGIS  K+ S++LP ++  LE A+IV IAA GDHSAALS                     
Sbjct: 197 LGISRGKVNSISLPKVTRGLEGAKIVSIAANGDHSAALS--------------------- 256

Query: 242 LRSVLAITLADGRLFTWGRGFGTNSDAFSPQYLPSPLSFRKVALGWNHALLLTGATEE-- 301
                    A+G  +TWGRGF   SDA+ P++L +   F K ALGWNHALLL+G  E   
Sbjct: 257 ---------ANGNFYTWGRGFRGKSDAYYPEHLTTSCCFIKAALGWNHALLLSGNGEAFM 316

Query: 302 ----------------------DNFRAVC-------GIKILDIAAGAEHSVVVTGMV--- 361
                                 D+  A+        G K++ IAAG+EHS +VTGM+   
Sbjct: 317 LGGNRHGVLNNPDKMSSAEHLLDSKEAILEEVPGLEGKKVVSIAAGSEHSALVTGMIFVF 376

Query: 362 FQKDGAVKTWGWGEHGQLGLGDTCDHTNPQTVTLRHKLESAAFDVKVYSGSGFTVAITTP 389
           F   G +KTWGWGEHGQLGLGDT D T+PQ V+L  ++ S A +VKVY GSGFT+ I T 
Sbjct: 377 FYHGGVIKTWGWGEHGQLGLGDTLDQTSPQAVSLGQEVPSEAVEVKVYCGSGFTIVIKTR 408

The following BLAST results are available for this feature:
BLAST of Carg17239 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022944970.12.8e-19383.22ultraviolet-B receptor UVR8 isoform X1 [Cucurbita moschata][more]
XP_023542275.19.0e-19283.02ultraviolet-B receptor UVR8 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022967996.13.3e-18680.94ultraviolet-B receptor UVR8 [Cucurbita maxima][more]
XP_011655663.13.4e-15468.59PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Cucumis sativus][more]
XP_008446303.15.7e-15468.75PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Cucumis melo][more]
BLAST of Carg17239 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G27060.15.2e-10150.00Regulator of chromosome condensation (RCC1) family protein[more]
AT5G63860.12.0e-2833.33Regulator of chromosome condensation (RCC1) family protein[more]
AT5G12350.11.1e-2628.17Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain[more]
AT3G47660.11.5e-2628.20Regulator of chromosome condensation (RCC1) family protein[more]
AT3G23270.15.5e-2628.53Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain[more]
BLAST of Carg17239 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q15751|HERC1_HUMAN3.7e-2728.29Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1... [more]
sp|Q9FN03|UVR8_ARATH3.7e-2733.33Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1[more]
sp|Q3MHW0|SRGEF_BOVIN1.2e-2528.31Secretion-regulating guanine nucleotide exchange factor OS=Bos taurus OX=9913 GN... [more]
sp|Q9UGK8|SRGEF_HUMAN3.4e-2527.27Secretion-regulating guanine nucleotide exchange factor OS=Homo sapiens OX=9606 ... [more]
sp|Q9UII4|HERC5_HUMAN2.2e-2435.50E3 ISG15--protein ligase HERC5 OS=Homo sapiens OX=9606 GN=HERC5 PE=1 SV=2[more]
BLAST of Carg17239 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BER2|A0A1S3BER2_CUCME3.8e-15468.75ultraviolet-B receptor UVR8 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489079 P... [more]
tr|A0A1S3BEQ9|A0A1S3BEQ9_CUCME4.9e-15468.59ultraviolet-B receptor UVR8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489079 P... [more]
tr|A0A0A0KVU0|A0A0A0KVU0_CUCSA5.1e-15167.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604210 PE=4 SV=1[more]
tr|A0A061E5H3|A0A061E5H3_THECC4.2e-11353.04Regulator of chromosome condensation family protein isoform 2 OS=Theobroma cacao... [more]
tr|A0A2P5FQG6|A0A2P5FQG6_9ROSA8.0e-11251.90Regulator of chromosome condensation OS=Trema orientalis OX=63057 GN=TorRG33x02_... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17239-RACarg17239-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 171..185
score: 44.44
coord: 326..347
score: 43.18
coord: 64..80
score: 30.39
coord: 8..24
score: 39.22
coord: 45..58
score: 36.9
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 62..109
e-value: 3.3E-12
score: 46.7
coord: 330..383
e-value: 4.7E-8
score: 33.4
coord: 170..218
e-value: 3.8E-8
score: 33.7
coord: 8..58
e-value: 2.4E-11
score: 43.9
coord: 113..162
e-value: 2.1E-12
score: 47.3
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 152..162
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 7..61
score: 14.725
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 331..386
score: 11.991
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 169..221
score: 14.022
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 114..165
score: 14.283
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 62..113
score: 14.424
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3DG3DSA:2.130.10.30coord: 2..230
e-value: 1.3E-59
score: 203.8
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3DG3DSA:2.130.10.30coord: 242..389
e-value: 2.1E-19
score: 71.6
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILYSSF50985RCC1/BLIP-IIcoord: 7..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 7..131
coord: 84..384