Lsi04G004660 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAAACTTCATCAAAGCAACTAACCATAAACACAATCCTTATGGAGAATAGAGGACAAATGAGAGAAACAAGAATCCCAATAGACCTCATACACTTTTTTACTAGAAAAAGAAAGTAGGGTACCAAAACAACTAAAAGGAGTGCGGATAAATGAGTGAGCCACAAAATTACATGAACGAATACAATTAACATAAGAACTAATGTATGTACGATGCACAAGCTCAAACATGACTTTAACCATATTTTTTATTTTAAAAAGATCAAATGACGGCTCATTGAGCGCACGAATAATCTCGATTGAATTAGATTTAACACTAAAGTGTTACTTCAAAAAACTTTGACATCTAAATAAAGCACGAGAGTCCCATTCTTTTTATCAATATGTATAACTATGTGTTGGTGACTTGGGATGTTGTAGTTAGAATACTCACTCTTATTGTACCTAAAAAAAATAAAAAAAAATAACATCAATTTCTTGTTACTCTTCGTACGGAGTCTTTCTTATCCAAGCCAAACCCAAAACCTCGATAAATCCTCCCTCTTGATGCTAATGCCGCTTCTTCCCACTTTCCTCCCTACCAAATTCATACTCTTCATAGCCTAAAATCAGCAATGCCTTTTCCGATTCATCCCAATCTCCAAGGACCCAATAACTCCGCTCGAACCCCAACGATTACCATTGGAGAAATCTCCTTTAAACCCTCTTCTTCTTCTATCATCATCCTCTGAATCAATTTCCAATGCCACAATCCCACTCCGTCCAAGTGTCTCGTCTAAATCCCGCTGGAGCAGAAGAGGAATTCTCTTGAACAATTCAACCCCCACTTGTGTTCTTCAGCTTCCGGTAAGCGATGACTACTTCTTTACCATTCACTTCACCATTAATCTCCGCATTTTCGCCGAGAAAGACCCTTTTCCCGCTCAAGCTTAATCGGCCCTCCATTAGTCAGAGTAAACTATCTCTTCACTCGTCGAGTCCATGTGTAAATGTTCGCCATTTCAACTGTTTTCATCCTGTTTTCTCGACTTCTCGGATCTTTCGTACTGTCACTCGAAGTTCGTCAAATGGGTTTCTCGAAGATGACGACATTATCCCCTCTTTTGAGGAGAAGCCGGTTAAAGTTCTGCTATTGGTTCTGTTTTGGGCATCTCTATCCCTTGCTTGGTTTGCTGCTTCTGGGGATGCCAAAGCTGCTGTTGATTCTATCAGAGCTTCGAATTTTGGCCTAAAGATCGCCAGAGCATTGCAGAGCTCAGGCTGGCCTGCTGAGGCTGTAGTATTTGCCCTCGCTACGCTTCCTGTAATTGAGCTCCGTGGGGCCATTCCTGTTGGTTACTGGATGCAGCTTAAGCCTGTAGCCCTAACCGTTCTATCCGTACTTGGGTGAGTTTTCAAATTTTAACTTCATTTTTTAGATTCATCTTTAAAAATTAACGAATCTGCATTTGGTTTACTACACATAATATTTCTCCTCAACTGCCGCTGCCTCTTTTGTGTTTGTGTAATTTTCATTCACATCGACATCAATGTTTTAATACAAGGTGAAAGTTTCAGTTTAAATAAACAAGTAGTAATGGAATAGATTACTACAGGCTCATGCTTTATTGGTATTACAAATGTAAGTGGGCCTTTATGTTTATTGAGGAATAGATAGTAAGTTCCATTACACAAGATGTGGAGATTTCAAACCTCAATGTGTTCTCATGTAGACACAATCCTCCTATGAATCAATGAAGGCCTAAATCTTGAAGTATAAGCCAAATCCTTTAGGCATTGATGGATGTTTGAAGTGAACTTTGAAATGGTTCATAAGTTTTTTGGACCAGTGAGTGATGAATTTCTTCGGTTTTCTATCTTAATTTTAAAAACCACAAACTCTTCTGCATGAGAGATACTTAAAGTTTGATTAGATGAAATAAATAAATTGTGGGATTCAAACTGCAGGAACATGGTTCCTGTACCCTTTATCATACTCTACTTGAAGAAATTTGCTACTTTCCTAGCGGGAAGGAATGCTTCTGCCTCCCAATTCCTCGATATGTTATTCAAGAGGGCCAAAGAGAAAGCTGCACCTGTTGAAGAGTTTCAGTGGCTTGGTCTAATGCTATTTGTGGCCGTGCCTTTCCCTGGAACAGGAGCTTGGACTGGTGCCATAATAGCTTCCATCTTAGATATGCCATTCTGGTCAGGTGTCTCTGCAAATTTCTTTGGTGTTGTAGTGGCAGGGCTTCTGGTCAACTTGTTGGTAAATCTTGGTATGAAGGAGGCCATTCTCACTGGAGTGATTCTTTTCATTATATCAACTTTCATGTGGAGCATTCTTCGACTGATAAGAAAAGCTGTCAGAAAATGAATTAATCGAAAAGGTTAGGTATTTCTATGTCTAATAACAACGAACAAGGTAAGGTCGTATCTGATCTTTAGTCTGATATATGTGGACTTAGACTTGTTACTTGTTAGTTTAAGTTGGCATTCTGATCAATTGATTACTTACTATTTTCTTGGTGGCGTAGATTTTTCTCTAATATCATATGAAGAATGAGTAGTTGGAAGTGTGGAGATGATTAACTGTAGATATAAAGTTTGTCTTGTGAACACTGTTCAGAAGAGAAACCATCTGCAAACAACTTTCATTTATCATACCAAGCCGAGAAATGTTGTGTAAATTCTGGTATTATGATTGTTATTTGCTCGTGTAGAATTGCAAATCTTGTTCTTGAGATGTCAGGTGCAAATATAGTTGTGCTTTGAAAATTGTAAAATCATGCTCGAATGTTGTGGTCTGGTTTGATTTGCCGGCAAGCATAGACATTACCTTAGTTGAGGAACAAAAATGGCAAGAAACTGAACCACCCAACACCATGGATTTGCCTTTAACTGCAATAATATACGAATTGTTGACTACTTCTGTAATAGTTGATATGGGCTCACCAATCCAACACATAGTTCAATGGTTGATATGGGGTCGTGAGTTTGACTCTTTGGTGTCTGTACTATGTGGCTATGATCTTGTTCTTAGGTTTGTCTGCCATTTTGTTGCATGTGTTTCTTGCTGCTGCACATCATTGGATTGGTTGTACTGCTCCAAAATGAAAGATACTGTATCAATTTGGATTTGTATTCTCAATGCCTTAGGACATCTTCCACTATTTTGGGTTGTTCCCAGTTTTTGTACTTAGAGTCAGATAATAAAGGTAGGGATTATTATTATTA AGAAAACTTCATCAAAGCAACTAACCATAAACACAATCCTTATGGAGAATAGAGGACAAATGAGAGAAACAAGAATCCCAATAGACCTCATACACTTTTTTACTAGAAAAAGAAAGTAGGGTACCAAAACAACTAAAAGGAGTGCGGATAAATGAGTGAGCCACAAAATTACATGAACGAATACAATTAACATAAGAACTAATGTATGTACGATGCACAAGCTCAAACATGACTTTAACCATATTTTTTATTTTAAAAAGATCAAATGACGGCTCATTGAGCGCACGAATAATCTCGATTGAATTAGATTTAACACTAAAGTGTTACTTCAAAAAACTTTGACATCTAAATAAAGCACGAGAGTCCCATTCTTTTTATCAATATGTATAACTATGTGTTGGTGACTTGGGATGTTGTAGTTAGAATACTCACTCTTATTGTACCTAAAAAAAATAAAAAAAAATAACATCAATTTCTTGTTACTCTTCGTACGGAGTCTTTCTTATCCAAGCCAAACCCAAAACCTCGATAAATCCTCCCTCTTGATGCTAATGCCGCTTCTTCCCACTTTCCTCCCTACCAAATTCATACTCTTCATAGCCTAAAATCAGCAATGCCTTTTCCGATTCATCCCAATCTCCAAGGACCCAATAACTCCGCTCGAACCCCAACGATTACCATTGGAGAAATCTCCTTTAAACCCTCTTCTTCTTCTATCATCATCCTCTGAATCAATTTCCAATGCCACAATCCCACTCCGTCCAAGTGTCTCGTCTAAATCCCGCTGGAGCAGAAGAGGAATTCTCTTGAACAATTCAACCCCCACTTGTGTTCTTCAGCTTCCGGTAAGCGATGACTACTTCTTTACCATTCACTTCACCATTAATCTCCGCATTTTCGCCGAGAAAGACCCTTTTCCCGCTCAAGCTTAATCGGCCCTCCATTAGTCAGAGTAAACTATCTCTTCACTCGTCGAGTCCATGTGTAAATGTTCGCCATTTCAACTGTTTTCATCCTGTTTTCTCGACTTCTCGGATCTTTCGTACTGTCACTCGAAGTTCGTCAAATGGGTTTCTCGAAGATGACGACATTATCCCCTCTTTTGAGGAGAAGCCGGTTAAAGTTCTGCTATTGGTTCTGTTTTGGGCATCTCTATCCCTTGCTTGGTTTGCTGCTTCTGGGGATGCCAAAGCTGCTGTTGATTCTATCAGAGCTTCGAATTTTGGCCTAAAGATCGCCAGAGCATTGCAGAGCTCAGGCTGGCCTGCTGAGGCTGTAGTATTTGCCCTCGCTACGCTTCCTGTAATTGAGCTCCGTGGGGCCATTCCTGTTGGTTACTGGATGCAGCTTAAGCCTGTAGCCCTAACCGTTCTATCCGTACTTGGGAACATGGTTCCTGTACCCTTTATCATACTCTACTTGAAGAAATTTGCTACTTTCCTAGCGGGAAGGAATGCTTCTGCCTCCCAATTCCTCGATATGTTATTCAAGAGGGCCAAAGAGAAAGCTGCACCTGTTGAAGAGTTTCAGTGGCTTGGTCTAATGCTATTTGTGGCCGTGCCTTTCCCTGGAACAGGAGCTTGGACTGGTGCCATAATAGCTTCCATCTTAGATATGCCATTCTGGTCAGGTGTCTCTGCAAATTTCTTTGGTGTTGTAGTGGCAGGGCTTCTGGTCAACTTGTTGGTAAATCTTGGTATGAAGGAGGCCATTCTCACTGGAGTGATTCTTTTCATTATATCAACTTTCATGTGGAGCATTCTTCGACTGATAAGAAAAGCTGTCAGAAAATGAATTAATCGAAAAGGTTAGGTATTTCTATGTCTAATAACAACGAACAAGGTAAGGTCGTATCTGATCTTTAGTCTGATATATGTGGACTTAGACTTGTTACTTGTTAGTTTAAGTTGGCATTCTGATCAATTGATTACTTACTATTTTCTTGGTGGCGTAGATTTTTCTCTAATATCATATGAAGAATGAGTAGTTGGAAGTGTGGAGATGATTAACTGTAGATATAAAGTTTGTCTTGTGAACACTGTTCAGAAGAGAAACCATCTGCAAACAACTTTCATTTATCATACCAAGCCGAGAAATGTTGTGTAAATTCTGGTATTATGATTGTTATTTGCTCGTGTAGAATTGCAAATCTTGTTCTTGAGATGTCAGGTGCAAATATAGTTGTGCTTTGAAAATTGTAAAATCATGCTCGAATGTTGTGGTCTGGTTTGATTTGCCGGCAAGCATAGACATTACCTTAGTTGAGGAACAAAAATGGCAAGAAACTGAACCACCCAACACCATGGATTTGCCTTTAACTGCAATAATATACGAATTGTTGACTACTTCTGTAATAGTTGATATGGGCTCACCAATCCAACACATAGTTCAATGGTTGATATGGGGTCGTGAGTTTGACTCTTTGGTGTCTGTACTATGTGGCTATGATCTTGTTCTTAGGTTTGTCTGCCATTTTGTTGCATGTGTTTCTTGCTGCTGCACATCATTGGATTGGTTGTACTGCTCCAAAATGAAAGATACTGTATCAATTTGGATTTGTATTCTCAATGCCTTAGGACATCTTCCACTATTTTGGGTTGTTCCCAGTTTTTGTACTTAGAGTCAGATAATAAAGGTAGGGATTATTATTATTA ATGACTACTTCTTTACCATTCACTTCACCATTAATCTCCGCATTTTCGCCGAGAAAGACCCTTTTCCCGCTCAAGCTTAATCGGCCCTCCATTAGTCAGAGTAAACTATCTCTTCACTCGTCGAGTCCATGTGTAAATGTTCGCCATTTCAACTGTTTTCATCCTGTTTTCTCGACTTCTCGGATCTTTCGTACTGTCACTCGAAGTTCGTCAAATGGGTTTCTCGAAGATGACGACATTATCCCCTCTTTTGAGGAGAAGCCGGTTAAAGTTCTGCTATTGGTTCTGTTTTGGGCATCTCTATCCCTTGCTTGGTTTGCTGCTTCTGGGGATGCCAAAGCTGCTGTTGATTCTATCAGAGCTTCGAATTTTGGCCTAAAGATCGCCAGAGCATTGCAGAGCTCAGGCTGGCCTGCTGAGGCTGTAGTATTTGCCCTCGCTACGCTTCCTGTAATTGAGCTCCGTGGGGCCATTCCTGTTGGTTACTGGATGCAGCTTAAGCCTGTAGCCCTAACCGTTCTATCCGTACTTGGGAACATGGTTCCTGTACCCTTTATCATACTCTACTTGAAGAAATTTGCTACTTTCCTAGCGGGAAGGAATGCTTCTGCCTCCCAATTCCTCGATATGTTATTCAAGAGGGCCAAAGAGAAAGCTGCACCTGTTGAAGAGTTTCAGTGGCTTGGTCTAATGCTATTTGTGGCCGTGCCTTTCCCTGGAACAGGAGCTTGGACTGGTGCCATAATAGCTTCCATCTTAGATATGCCATTCTGGTCAGGTGTCTCTGCAAATTTCTTTGGTGTTGTAGTGGCAGGGCTTCTGGTCAACTTGTTGGTAAATCTTGGTATGAAGGAGGCCATTCTCACTGGAGTGATTCTTTTCATTATATCAACTTTCATGTGGAGCATTCTTCGACTGATAAGAAAAGCTGTCAGAAAATGA MTTSLPFTSPLISAFSPRKTLFPLKLNRPSISQSKLSLHSSSPCVNVRHFNCFHPVFSTSRIFRTVTRSSSNGFLEDDDIIPSFEEKPVKVLLLVLFWASLSLAWFAASGDAKAAVDSIRASNFGLKIARALQSSGWPAEAVVFALATLPVIELRGAIPVGYWMQLKPVALTVLSVLGNMVPVPFIILYLKKFATFLAGRNASASQFLDMLFKRAKEKAAPVEEFQWLGLMLFVAVPFPGTGAWTGAIIASILDMPFWSGVSANFFGVVVAGLLVNLLVNLGMKEAILTGVILFIISTFMWSILRLIRKAVRK
BLAST of Lsi04G004660 vs. TrEMBL
Match: A0A0A0KQH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604240 PE=4 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 2.0e-152 Identity = 288/313 (92.01%), Postives = 297/313 (94.89%), Query Frame = 1
BLAST of Lsi04G004660 vs. TrEMBL
Match: M5XGS5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015818mg PE=4 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 1.5e-107 Identity = 221/313 (70.61%), Postives = 254/313 (81.15%), Query Frame = 1
BLAST of Lsi04G004660 vs. TrEMBL
Match: A0A067JBU6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21708 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 2.4e-105 Identity = 214/310 (69.03%), Postives = 246/310 (79.35%), Query Frame = 1
BLAST of Lsi04G004660 vs. TrEMBL
Match: D7TNF2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01540 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 2.7e-101 Identity = 209/311 (67.20%), Postives = 242/311 (77.81%), Query Frame = 1
BLAST of Lsi04G004660 vs. TrEMBL
Match: V4TPN6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032129mg PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 6.1e-101 Identity = 211/306 (68.95%), Postives = 242/306 (79.08%), Query Frame = 1
BLAST of Lsi04G004660 vs. TAIR10
Match: AT2G02590.1 (AT2G02590.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 349.0 bits (894), Expect = 3.1e-96 Identity = 185/260 (71.15%), Postives = 215/260 (82.69%), Query Frame = 1
BLAST of Lsi04G004660 vs. NCBI nr
Match: gi|449434831|ref|XP_004135199.1| (PREDICTED: uncharacterized protein LOC101204187 [Cucumis sativus]) HSP 1 Score: 546.6 bits (1407), Expect = 2.9e-152 Identity = 288/313 (92.01%), Postives = 297/313 (94.89%), Query Frame = 1
BLAST of Lsi04G004660 vs. NCBI nr
Match: gi|659090985|ref|XP_008446308.1| (PREDICTED: uncharacterized protein LOC103489082 [Cucumis melo]) HSP 1 Score: 540.4 bits (1391), Expect = 2.0e-150 Identity = 285/313 (91.05%), Postives = 294/313 (93.93%), Query Frame = 1
BLAST of Lsi04G004660 vs. NCBI nr
Match: gi|1009153909|ref|XP_015894881.1| (PREDICTED: uncharacterized protein LOC107428807 [Ziziphus jujuba]) HSP 1 Score: 414.8 bits (1065), Expect = 1.3e-112 Identity = 227/317 (71.61%), Postives = 258/317 (81.39%), Query Frame = 1
BLAST of Lsi04G004660 vs. NCBI nr
Match: gi|645229931|ref|XP_008221691.1| (PREDICTED: uncharacterized protein LOC103321638 [Prunus mume]) HSP 1 Score: 398.3 bits (1022), Expect = 1.3e-107 Identity = 222/313 (70.93%), Postives = 254/313 (81.15%), Query Frame = 1
BLAST of Lsi04G004660 vs. NCBI nr
Match: gi|596224101|ref|XP_007224123.1| (hypothetical protein PRUPE_ppa015818mg [Prunus persica]) HSP 1 Score: 397.5 bits (1020), Expect = 2.1e-107 Identity = 221/313 (70.61%), Postives = 254/313 (81.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|