CmaCh18G011820 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCACATAAATTTTTTGTTTTTTCCAACTCTCCTCTTTATTGGGTAAAATCGTAGCAAGAACTCTGCTTGAACCCTTGTGATCGGCATCGGATAAATCTCCTCTCAACCCCCTTCCATTATCATCCTCTAAATTGATTTCCAATGCCAAAATCCCACTTAGCAGAAGAGGGATTTTCTGGAAGAATTTAGCCCCAGACGTGTTCTTCAGCTTCCGGTAAGGAATGGCTACTTCTTTAGTGTTGACTTCACCATTAATGTCGGCCTTTTCCGCGAGAAAGACCCTTATCTCGCTAAATCTCAATCGACCCTCCATTAATCCGGGTAAACAACCTCTCCCTAGGTCGAGTTCATGTATAAACATTCGCCATTTCAACTGTTTTAATCCTGTTTTCTCGACTTCTCGGATGTCTTGTACTGTCACTCGATGTTCATCGAATGAGTTTCTGGAAGTTGATGACATTTTGCCCTCTTTTGAGGAGAAGCCAGTTAAAGTTATGATGCTGTTGGTTCTGTTTTGGGCTTCTTTATCCCTTGCTTGGTTTGCTGCTTCTGGGGATGCCAAAGCTGCTGTTGACTCTATCAGAGCTTCGAATTTTGGTCTAAAGATCGCCAGCGCATTGCAGAGCTCAGGCTGGCCTGCTGAGGCGATAGTATTTGCCCTCGCTACGCTTCCTGTTGTTGAGCTCCGTGGGGCGATCCCTGTTGGCTACTGGATGCAGCTAAAGCCTGTAGCTCTGACCGTTCTATCCGTTCTTGGGTGAGATTTCAATTTTTGATGTCCGAAAACTCATTTCCTTGATTCTACATGTTCTCCAAATTTCTTCTCATGGGCATTAACGTTTTAGTGTGAATAGATTACTACAAGTTCATGCTTGATTGGTGTTACATATATAAGTGGGCCTTTATGTCTTGAATAATAGAAGGCAAGTTCATATTATCGTTCTAGCCATTACAATAGATGTAGAGATTTCAAACCTCAGTGTGTTCATGGAGACACAAGCCTCCTATGAATCAAAGTAGGCCTAAATCTTGAAGCACAATTTAAACGTTGATGGATGTTTGAAGTGAACTTTAAAATGGTTCTTGAGTCTTAGACCAGTGATCATCTGAGGAATTTCTTCCATCGTTTATGTTAAACTCTTCTGCATGAGTGAATCTTAAAATCTGATTACCTGAAATCAATGATCTGTTTCTACATGACATTCCTTTATTTTCACTTTTTTTAGTTTGGAGCTTCTTGTTTGAGATATATTGTTTTCGTATAGATTGGTCTAGAGGTTGTAGCTCTGTGGTCAAGGAGCTCTTACTTCATCTGCCTTTCAATGTTTTTGTAACGACCGCTAGCAGATATCGTCCTCTTTATGCTTCCCCTTTCAGGCTTCCCCTTAATGTTCTTAAAACGCGTTTGCTAGGGAGAGGTTTCCACACCCTTATAAATAATGTTTCGTTCTCCTCTCTAACTGATGTGGGAACTTACAGTCCACCCCCCTTCAGGGTCCAGCGTCCTCACTGGCACTCGTTCTCTTCTCCAATCAATGTGGGACCCACCAATCCACCCCCTTCGGAGCCCAGTGTTCTTGCTGGCACACCGCCTCGTGTCCACCCCCTTTGGGACTCAGCCTCCTCGCTGACACATCGCTCGGTGTCTAGCTCTGATACCATTTGTAACGGTCTAAGCCCACCGCTAGTCGATATTGTCCTCTTTGGACTTTTCCTCTGAGCTTTCCCTCAAGGTTTTTAAAACTCGTCTACTAGGGAGAGGTTTCTACACCCTTATAAAGAATGCTTTGTTCTCCTCTCCGACCATGAAGGTGAGATCTCACAGTTTTTTTTATAGCAGGCCAGTTTGTTTGATTTTGTTGGGTCTTTTGGATAAAAGGAATGATAGAATTTGTAGTACTTTTGGTGATTATCCTTTTAAGTCTTATTTGCTTGATTGAAGCTCGTACCTCTTGTATTCTTTAATTTGTTCAAGTTTGTTTTTTCACTCATAATAATTTGTGGGATTCAAATTGCAGGAACATGGTTCCTGTGCCCTTCATCATACTCTATTTAAAGAAATTTGCAACTTTCCTTGCGGGAAGGAATGCTACTGCCTCTCAATTCCTCGATATGTTATTCAAGAGGGCCAAAGCGAAGGCTGCACCTGTTGAAGAGTTTCAATGGCTCGGTCTAATGCTATTCGTGGCTGTGCCTTTCCCTGGAACAGGAGCTTGGACTGGTGCCATTATAGCTTCCATCCTAGACATGCCATTCTGGTCAGGCCTTTCTGCAAATTTCTTTGGTGTTGTATTGGCAGGGCTTTTGGTGAACTTGTTGGTGAATCTTGGTCTTAAGGAGGCTGTTTTCACTGGAGTGATTCTTTTCATTATATCGACTTTCATGTGGAGCATTCTTCGACTCATTCGCAAAGCTTTCAACAAAGGAATTAAATAA TCACATAAATTTTTTGTTTTTTCCAACTCTCCTCTTTATTGGGTAAAATCGTAGCAAGAACTCTGCTTGAACCCTTGTGATCGGCATCGGATAAATCTCCTCTCAACCCCCTTCCATTATCATCCTCTAAATTGATTTCCAATGCCAAAATCCCACTTAGCAGAAGAGGGATTTTCTGGAAGAATTTAGCCCCAGACGTGTTCTTCAGCTTCCGGTAAGGAATGGCTACTTCTTTAGTGTTGACTTCACCATTAATGTCGGCCTTTTCCGCGAGAAAGACCCTTATCTCGCTAAATCTCAATCGACCCTCCATTAATCCGGGTAAACAACCTCTCCCTAGGTCGAGTTCATGTATAAACATTCGCCATTTCAACTGTTTTAATCCTGTTTTCTCGACTTCTCGGATGTCTTGTACTGTCACTCGATGTTCATCGAATGAGTTTCTGGAAGTTGATGACATTTTGCCCTCTTTTGAGGAGAAGCCAGTTAAAGTTATGATGCTGTTGGTTCTGTTTTGGGCTTCTTTATCCCTTGCTTGGTTTGCTGCTTCTGGGGATGCCAAAGCTGCTGTTGACTCTATCAGAGCTTCGAATTTTGGTCTAAAGATCGCCAGCGCATTGCAGAGCTCAGGCTGGCCTGCTGAGGCGATAGTATTTGCCCTCGCTACGCTTCCTGTTGTTGAGCTCCGTGGGGCGATCCCTGTTGGCTACTGGATGCAGCTAAAGCCTGTAGCTCTGACCGTTCTATCCGTTCTTGGGAACATGGTTCCTGTGCCCTTCATCATACTCTATTTAAAGAAATTTGCAACTTTCCTTGCGGGAAGGAATGCTACTGCCTCTCAATTCCTCGATATGTTATTCAAGAGGGCCAAAGCGAAGGCTGCACCTGTTGAAGAGTTTCAATGGCTCGGTCTAATGCTATTCGTGGCTGTGCCTTTCCCTGGAACAGGAGCTTGGACTGGTGCCATTATAGCTTCCATCCTAGACATGCCATTCTGGTCAGGCCTTTCTGCAAATTTCTTTGGTGTTGTATTGGCAGGGCTTTTGGTGAACTTGTTGGTGAATCTTGGTCTTAAGGAGGCTGTTTTCACTGGAGTGATTCTTTTCATTATATCGACTTTCATGTGGAGCATTCTTCGACTCATTCGCAAAGCTTTCAACAAAGGAATTAAATAA ATGGCTACTTCTTTAGTGTTGACTTCACCATTAATGTCGGCCTTTTCCGCGAGAAAGACCCTTATCTCGCTAAATCTCAATCGACCCTCCATTAATCCGGGTAAACAACCTCTCCCTAGGTCGAGTTCATGTATAAACATTCGCCATTTCAACTGTTTTAATCCTGTTTTCTCGACTTCTCGGATGTCTTGTACTGTCACTCGATGTTCATCGAATGAGTTTCTGGAAGTTGATGACATTTTGCCCTCTTTTGAGGAGAAGCCAGTTAAAGTTATGATGCTGTTGGTTCTGTTTTGGGCTTCTTTATCCCTTGCTTGGTTTGCTGCTTCTGGGGATGCCAAAGCTGCTGTTGACTCTATCAGAGCTTCGAATTTTGGTCTAAAGATCGCCAGCGCATTGCAGAGCTCAGGCTGGCCTGCTGAGGCGATAGTATTTGCCCTCGCTACGCTTCCTGTTGTTGAGCTCCGTGGGGCGATCCCTGTTGGCTACTGGATGCAGCTAAAGCCTGTAGCTCTGACCGTTCTATCCGTTCTTGGGAACATGGTTCCTGTGCCCTTCATCATACTCTATTTAAAGAAATTTGCAACTTTCCTTGCGGGAAGGAATGCTACTGCCTCTCAATTCCTCGATATGTTATTCAAGAGGGCCAAAGCGAAGGCTGCACCTGTTGAAGAGTTTCAATGGCTCGGTCTAATGCTATTCGTGGCTGTGCCTTTCCCTGGAACAGGAGCTTGGACTGGTGCCATTATAGCTTCCATCCTAGACATGCCATTCTGGTCAGGCCTTTCTGCAAATTTCTTTGGTGTTGTATTGGCAGGGCTTTTGGTGAACTTGTTGGTGAATCTTGGTCTTAAGGAGGCTGTTTTCACTGGAGTGATTCTTTTCATTATATCGACTTTCATGTGGAGCATTCTTCGACTCATTCGCAAAGCTTTCAACAAAGGAATTAAATAA MATSLVLTSPLMSAFSARKTLISLNLNRPSINPGKQPLPRSSSCINIRHFNCFNPVFSTSRMSCTVTRCSSNEFLEVDDILPSFEEKPVKVMMLLVLFWASLSLAWFAASGDAKAAVDSIRASNFGLKIASALQSSGWPAEAIVFALATLPVVELRGAIPVGYWMQLKPVALTVLSVLGNMVPVPFIILYLKKFATFLAGRNATASQFLDMLFKRAKAKAAPVEEFQWLGLMLFVAVPFPGTGAWTGAIIASILDMPFWSGLSANFFGVVLAGLLVNLLVNLGLKEAVFTGVILFIISTFMWSILRLIRKAFNKGIK
BLAST of CmaCh18G011820 vs. TrEMBL
Match: A0A0A0KQH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604240 PE=4 SV=1) HSP 1 Score: 503.8 bits (1296), Expect = 1.5e-139 Identity = 269/314 (85.67%), Postives = 286/314 (91.08%), Query Frame = 1
BLAST of CmaCh18G011820 vs. TrEMBL
Match: M5XGS5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015818mg PE=4 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 1.4e-105 Identity = 221/315 (70.16%), Postives = 251/315 (79.68%), Query Frame = 1
BLAST of CmaCh18G011820 vs. TrEMBL
Match: A0A067JBU6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21708 PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 3.1e-100 Identity = 211/323 (65.33%), Postives = 249/323 (77.09%), Query Frame = 1
BLAST of CmaCh18G011820 vs. TrEMBL
Match: D7TNF2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01540 PE=4 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 3.4e-99 Identity = 206/311 (66.24%), Postives = 243/311 (78.14%), Query Frame = 1
BLAST of CmaCh18G011820 vs. TrEMBL
Match: V4TPN6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032129mg PE=4 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 2.2e-98 Identity = 197/255 (77.25%), Postives = 216/255 (84.71%), Query Frame = 1
BLAST of CmaCh18G011820 vs. TAIR10
Match: AT2G02590.1 (AT2G02590.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 341.3 bits (874), Expect = 6.5e-94 Identity = 175/236 (74.15%), Postives = 201/236 (85.17%), Query Frame = 1
BLAST of CmaCh18G011820 vs. NCBI nr
Match: gi|449434831|ref|XP_004135199.1| (PREDICTED: uncharacterized protein LOC101204187 [Cucumis sativus]) HSP 1 Score: 503.8 bits (1296), Expect = 2.1e-139 Identity = 269/314 (85.67%), Postives = 286/314 (91.08%), Query Frame = 1
BLAST of CmaCh18G011820 vs. NCBI nr
Match: gi|659090985|ref|XP_008446308.1| (PREDICTED: uncharacterized protein LOC103489082 [Cucumis melo]) HSP 1 Score: 495.0 bits (1273), Expect = 1.0e-136 Identity = 264/314 (84.08%), Postives = 282/314 (89.81%), Query Frame = 1
BLAST of CmaCh18G011820 vs. NCBI nr
Match: gi|1009153909|ref|XP_015894881.1| (PREDICTED: uncharacterized protein LOC107428807 [Ziziphus jujuba]) HSP 1 Score: 405.6 bits (1041), Expect = 8.0e-110 Identity = 223/319 (69.91%), Postives = 256/319 (80.25%), Query Frame = 1
BLAST of CmaCh18G011820 vs. NCBI nr
Match: gi|596224101|ref|XP_007224123.1| (hypothetical protein PRUPE_ppa015818mg [Prunus persica]) HSP 1 Score: 391.0 bits (1003), Expect = 2.0e-105 Identity = 221/315 (70.16%), Postives = 251/315 (79.68%), Query Frame = 1
BLAST of CmaCh18G011820 vs. NCBI nr
Match: gi|645229931|ref|XP_008221691.1| (PREDICTED: uncharacterized protein LOC103321638 [Prunus mume]) HSP 1 Score: 390.2 bits (1001), Expect = 3.5e-105 Identity = 221/315 (70.16%), Postives = 250/315 (79.37%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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