Lsi04G003420 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi04G003420
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionDNA-3-methyladenine glycosylase, putative
Locationchr04 : 3422632 .. 3424259 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAACCTTTATAATCTCAATCCATTTTTGTATCAAAATTGTCCCATTAAGTCTTATCTTATTTTCCAATATGTCATCCAAAGCCACTGTTAGAAGACAGATTCTGGAGAGGCAAACATGTCCTAAAGAGAAAGATAGGACAAGCCAACACATTTTGTCCAAACACCTTAAGAAGATTTACCCAATTGGGTTACAAAGAACCACTTCATCACTATCTTTATCTTCACTATCATTGTCTTTGTCTCAAAATTCAAATGACTCTTCTCTTACAGACTCCTCAATCCAATTGGATCAGAAAATTTCGTACGCAATTCGCCTTATTACGCCGCCGCCTCCTGAAAGAAGAGAAGTCCCATTGCCTAAAAGTATCCAACAACAAAGTCAAGAACTTAGTGATGGGGAATTGAGGAGGTGCAACTGGATCACCCATACCAGTGGTAAGATTATACTTACACAGTTATAAAATTTTTCGCTCTCGTAACCAGATAAATGCTTCCTAGCAAGTGATAATATAGCATTGTCCAAGAAAAATAAGTCAACAAAGTTTTTTAGGAAGTTCAAACTATTGATATGATTAATAATGTCATTAACTCAGTATAGCAGTTGCTACCACTGTCATATTTCTTAAGAAAATGAGATTGTGGCTTCTAACAAAAACTACAGAATAGTATAGTTCTGATATGGACTTAAAACACTATATCTTACTGAACAAAGAAAAAAGGGAAAAAGTAGTTTCCCTTTATAGGATACTTTCCCCACATGCTGGATTACTTCGTGATTGATGTTTTTCGTAATTGATACAGATAAAGCCTATGTATCTTTTCATGACGAGTGTTGGGGTGTCCCAGTATACGATGACAAGTAGGTTATCATGTAACTTTTCATTTATTTAACCTATCAATTAATAGATTTGTATGTTAACTTCGAAGAAAAATTACCATACAGCCGACTTTTCGAGCTACTCGCACTATCTGGGATGTTGATGGACTACAATTGGACTGAAATTGTGAAAAGAAGGGAACTATTCAGGTAATATTTATTTTTTTTCATAACTCACACTTTATGTACTTAAGATAAATGTCAATCACATATAAATATATATACACATATGGTTGGTCAATAGGGAAGCTTTTGCTGGATTTGAGCCAAGTACAGTTGCCAATATGGGGGAGAAAGAGATAACAGATATAGCTTCTGACAAGGCCATTATGCTGGTGGAGAGCAGAGTGAGGTGCATAGTAGATAATGCCAAATGCATATTAAAGGCAAGCTAGTTCAACTCATCTTTTAACTAGTTATTTCACAGATTGTATTATTAATTAGAATTATTGGTTTTTAATTCAACTGCAGATAGCTAGAGATTTTGGATCGTTTAGTAACTATATGTGGAGCTATATGAACTTTAAACCTACAATAAACAGATTTAGACATCCAAGAAATGTTCCCTTGAGAAGTCCCAAAGCAGAAGCCATTAGCAAGGACATGGTGAAGCGCGGTTTTCGGTTTGTTGGGCCAGTGATTGTCTATTCATTCATGCAAGCGGCTGGGTTGACCATCGATCATCTTGTCGATTGTTTTCGACACGGTGAATGTGTAAATCTTGCAGAAAGGCCATGGAGACATATCTGA

mRNA sequence

CAAACCTTTATAATCTCAATCCATTTTTGTATCAAAATTGTCCCATTAAGTCTTATCTTATTTTCCAATATGTCATCCAAAGCCACTGTTAGAAGACAGATTCTGGAGAGGCAAACATGTCCTAAAGAGAAAGATAGGACAAGCCAACACATTTTGTCCAAACACCTTAAGAAGATTTACCCAATTGGGTTACAAAGAACCACTTCATCACTATCTTTATCTTCACTATCATTGTCTTTGTCTCAAAATTCAAATGACTCTTCTCTTACAGACTCCTCAATCCAATTGGATCAGAAAATTTCGTACGCAATTCGCCTTATTACGCCGCCGCCTCCTGAAAGAAGAGAAGTCCCATTGCCTAAAAGTATCCAACAACAAAGTCAAGAACTTAGTGATGGGGAATTGAGGAGGTGCAACTGGATCACCCATACCAGTGATAAAGCCTATGTATCTTTTCATGACGAGTGTTGGGGTGTCCCAGTATACGATGACAACCGACTTTTCGAGCTACTCGCACTATCTGGGATGTTGATGGACTACAATTGGACTGAAATTGTGAAAAGAAGGGAACTATTCAGGGAAGCTTTTGCTGGATTTGAGCCAAGTACAGTTGCCAATATGGGGGAGAAAGAGATAACAGATATAGCTTCTGACAAGGCCATTATGCTGGTGGAGAGCAGAATAGCTAGAGATTTTGGATCGTTTAGTAACTATATGTGGAGCTATATGAACTTTAAACCTACAATAAACAGATTTAGACATCCAAGAAATGTTCCCTTGAGAAGTCCCAAAGCAGAAGCCATTAGCAAGGACATGGTGAAGCGCGGTTTTCGGTTTGTTGGGCCAGTGATTGTCTATTCATTCATGCAAGCGGCTGGGTTGACCATCGATCATCTTGTCGATTGTTTTCGACACGGTGAATGTGTAAATCTTGCAGAAAGGCCATGGAGACATATCTGA

Coding sequence (CDS)

ATGTCATCCAAAGCCACTGTTAGAAGACAGATTCTGGAGAGGCAAACATGTCCTAAAGAGAAAGATAGGACAAGCCAACACATTTTGTCCAAACACCTTAAGAAGATTTACCCAATTGGGTTACAAAGAACCACTTCATCACTATCTTTATCTTCACTATCATTGTCTTTGTCTCAAAATTCAAATGACTCTTCTCTTACAGACTCCTCAATCCAATTGGATCAGAAAATTTCGTACGCAATTCGCCTTATTACGCCGCCGCCTCCTGAAAGAAGAGAAGTCCCATTGCCTAAAAGTATCCAACAACAAAGTCAAGAACTTAGTGATGGGGAATTGAGGAGGTGCAACTGGATCACCCATACCAGTGATAAAGCCTATGTATCTTTTCATGACGAGTGTTGGGGTGTCCCAGTATACGATGACAACCGACTTTTCGAGCTACTCGCACTATCTGGGATGTTGATGGACTACAATTGGACTGAAATTGTGAAAAGAAGGGAACTATTCAGGGAAGCTTTTGCTGGATTTGAGCCAAGTACAGTTGCCAATATGGGGGAGAAAGAGATAACAGATATAGCTTCTGACAAGGCCATTATGCTGGTGGAGAGCAGAATAGCTAGAGATTTTGGATCGTTTAGTAACTATATGTGGAGCTATATGAACTTTAAACCTACAATAAACAGATTTAGACATCCAAGAAATGTTCCCTTGAGAAGTCCCAAAGCAGAAGCCATTAGCAAGGACATGGTGAAGCGCGGTTTTCGGTTTGTTGGGCCAGTGATTGTCTATTCATTCATGCAAGCGGCTGGGTTGACCATCGATCATCTTGTCGATTGTTTTCGACACGGTGAATGTGTAAATCTTGCAGAAAGGCCATGGAGACATATCTGA

Protein sequence

MSSKATVRRQILERQTCPKEKDRTSQHILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQNSNDSSLTDSSIQLDQKISYAIRLITPPPPERREVPLPKSIQQQSQELSDGELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEPSTVANMGEKEITDIASDKAIMLVESRIARDFGSFSNYMWSYMNFKPTINRFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVNLAERPWRHI
Homology
[Close]
BLAST of Lsi04G003420 vs. Swiss-Prot
Match: GUAA_HELHP (Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter hepaticus (strain ATCC 51449 / 3B1) GN=guaA PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 6.0e-35
Identity = 75/204 (36.76%), Postives = 116/204 (56.86%), Query Frame = 1 

Query: 96  LPKSIQQQSQELSDG--ELRRCNWITHTSD---KAYVSFHDECWGVPVYDDNRLFELLAL 155
           L KS+  ++Q+ ++G  E  RC W T   +   K Y  +HD  WG P+++D +LFE L L
Sbjct: 767 LQKSLGLEAQDSNEGVREKVRCAWATDKDEAARKLYEDYHDTEWGEPLHEDKKLFEHLVL 826

Query: 156 SGMLMDYNWTEIVKRRELFREAFAGFEPSTVANMGEKEITDIASDKAIMLVESRI----- 215
            G     +W  I+K+RE FR AF  F+P  VAN  E +I ++  ++ I+   ++I     
Sbjct: 827 EGFQAGLSWITILKKREAFRVAFDDFDPHIVANYDEDKIKELMRNEGIIRNRAKIEAAII 886

Query: 216 --------ARDFGSFSNYMWSYMNFKPTINRFRHPRNVPLRSPKAEAISKDMVKRGFRFV 275
                    R+FGSF  Y+W ++  KP IN F    ++P  +P ++ I+KD+ KRGF+FV
Sbjct: 887 NAKAFMAVQREFGSFDKYIWGFVGGKPIINAFESIADLPASTPLSDKIAKDLKKRGFKFV 946

Query: 276 GPVIVYSFMQAAGLTIDHLVDCFR 282
           G   +Y+ MQ+ G+  DHL  CF+
Sbjct: 947 GTTTMYAMMQSIGMVNDHLTSCFK 970

[Close]
BLAST of Lsi04G003420 vs. Swiss-Prot
Match: 3MG1_ECOLI (DNA-3-methyladenine glycosylase 1 OS=Escherichia coli (strain K12) GN=tag PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.8e-30
Identity = 62/181 (34.25%), Postives = 100/181 (55.25%), Query Frame = 1 

Query: 112 LRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFRE 171
           + RC W++   D  Y+++HD  WGVP  D  +LFE++ L G     +W  ++K+RE +R 
Sbjct: 1   MERCGWVSQ--DPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRA 60

Query: 172 AFAGFEPSTVANMGEKEITDIASDKAIMLVESRIARDFGS-------------FSNYMWS 231
            F  F+P  VA M E+++  +  D  I+    +I    G+             F +++WS
Sbjct: 61  CFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFVDFVWS 120

Query: 232 YMNFKPTINRFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVD 280
           ++N +P + +      +P  +  ++A+SK + KRGF+FVG  I YSFMQA GL  DH+V 
Sbjct: 121 FVNHQPQVTQATTLSEIPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVG 179

[Close]
BLAST of Lsi04G003420 vs. Swiss-Prot
Match: 3MGA_HAEIN (DNA-3-methyladenine glycosylase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=tag PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.1e-28
Identity = 61/179 (34.08%), Postives = 101/179 (56.42%), Query Frame = 1 

Query: 114 RCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAF 173
           RC W+   S   Y+ +HD+ WG P +D  +LFE + L G     +W  ++K+RE +REAF
Sbjct: 4   RCPWVGEQS--IYIDYHDKEWGKPEFDSQKLFEKICLEGQQAGLSWITVLKKRESYREAF 63

Query: 174 AGFEPSTVANMGEKEITDIASDKAIMLVESRI------ARDF-------GSFSNYMWSYM 233
             F+P  +A M   +I     +  ++   +++      A+ +        +FS+++WS++
Sbjct: 64  HQFDPKKIAKMTALDIDACMQNSGLIRHRAKLEAIVKNAKAYLAMEKCGENFSDFIWSFV 123

Query: 234 NFKPTINRFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDC 280
           N KP +N     R+VP ++  ++A+SK + KRGF F+G    Y+FMQ+ GL  DHL DC
Sbjct: 124 NHKPIVNDVPDLRSVPTKTEVSKALSKALKKRGFVFIGETTCYAFMQSMGLVDDHLNDC 180

[Close]
BLAST of Lsi04G003420 vs. TrEMBL
Match: A0A0A0KUC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606920 PE=4 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 3.0e-158
Identity = 287/309 (92.88%), Postives = 292/309 (94.50%), Query Frame = 1 

Query: 1   MSSKATVRRQILERQTCPKEKDRTSQHILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60
           MSSKATVRR ILERQ CPKEKDRTSQ+ILSKHLKKIYPIGLQRTTSSLSLSS+SLSLSQN
Sbjct: 1   MSSKATVRRHILERQACPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSMSLSLSQN 60

Query: 61  SNDSSLTDSSIQLDQKISYAIRLITPPPPERREVPLPKSIQQQSQELSDGELRRCNWITH 120
           SNDSSLTDSSIQLDQKISYAIRLITPPP ERREVPLPKSIQQQSQELSDGELRRCNWITH
Sbjct: 61  SNDSSLTDSSIQLDQKISYAIRLITPPP-ERREVPLPKSIQQQSQELSDGELRRCNWITH 120

Query: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEPST 180
           TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEPS 
Sbjct: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEPSV 180

Query: 181 VANMGEKEITDIASDKAIMLVESR-------------IARDFGSFSNYMWSYMNFKPTIN 240
           VANMGEKEITD+ASDKAIMLVESR             IARDFGSFSNYMWSY+NFKPTIN
Sbjct: 181 VANMGEKEITDVASDKAIMLVESRVRCIVDNAKCILKIARDFGSFSNYMWSYVNFKPTIN 240

Query: 241 RFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVN 297
           RFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHL+DCFRHGECVN
Sbjct: 241 RFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLIDCFRHGECVN 300

[Close]
BLAST of Lsi04G003420 vs. TrEMBL
Match: W9QWE1_9ROSA (Putative Glutamine amidotransferase OS=Morus notabilis GN=L484_026493 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 1.1e-120
Identity = 220/298 (73.83%), Postives = 256/298 (85.91%), Query Frame = 1 

Query: 4   KATVRRQILERQTCPKE---KDRTSQHILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 63
           KA VRR +LER    KE   KD+TS  +LSKHLK+IYPIGLQ++ SS SLSSLSLSLS+N
Sbjct: 3   KANVRRPVLERNGSLKENEKKDKTSPGLLSKHLKRIYPIGLQKSNSSPSLSSLSLSLSEN 62

Query: 64  SNDSSLTDSSIQLDQKISYAIRLITPPPPERREVPLPKSIQQQSQELSDG--ELRRCNWI 123
           SNDSSL D    LD KIS A+RL+   PP R+E P PK++QQQ  + ++   ELRRCNWI
Sbjct: 63  SNDSSLADFGSPLDHKISLALRLVA--PPRRKESPAPKNVQQQQSQDANNPEELRRCNWI 122

Query: 124 THTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEP 183
           T  SDK YV+FHDECWGVPVYDDN+LFELLA+SGMLMDYNWTEI+KRRELFREAF+GF+P
Sbjct: 123 TKNSDKVYVAFHDECWGVPVYDDNQLFELLAMSGMLMDYNWTEILKRRELFREAFSGFDP 182

Query: 184 STVANMGEKEITDIASDKAIMLVESRIARDFGSFSNYMWSYMNFKPTINRFRHPRNVPLR 243
           S VA MGEKEIT+I+S+KAIML ESR+ R+FGSFSNYMWSY++ KP INR+R+PRNVPLR
Sbjct: 183 SKVAKMGEKEITEISSNKAIMLAESRVVREFGSFSNYMWSYVDHKPVINRYRYPRNVPLR 242

Query: 244 SPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVNLAERPWRHI 297
           SPKAEAISKD++KRGFRFVGPVIV+SFMQAAGLTIDHLV+C+RH ECV+LAERPWRHI
Sbjct: 243 SPKAEAISKDLLKRGFRFVGPVIVHSFMQAAGLTIDHLVNCYRHYECVSLAERPWRHI 298

[Close]
BLAST of Lsi04G003420 vs. TrEMBL
Match: B9RLG1_RICCO (DNA-3-methyladenine glycosylase, putative OS=Ricinus communis GN=RCOM_1466540 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 2.7e-119
Identity = 228/320 (71.25%), Postives = 270/320 (84.38%), Query Frame = 1 

Query: 3   SKATVRRQILERQTC-PKEKDRTSQHIL---SKHLKKIYPIGLQRTTSSLSLSSLSLSLS 62
           SKATVR+Q+LE+++    EK+RT+ + L   SK+LKK+YPIGL R+ SSLSLSS+SLSLS
Sbjct: 2   SKATVRKQVLEKKSIFTNEKERTTSNQLGFFSKNLKKVYPIGLHRSNSSLSLSSVSLSLS 61

Query: 63  QNSNDSSLTD-SSIQLDQKISYAIRLITPPPPERREVP-LPKSIQQQ-------SQELSD 122
           +NSNDSSLTD S+  LDQKIS A+RLITP   ERREVP L +++QQQ       SQE + 
Sbjct: 62  ENSNDSSLTDYSNTPLDQKISLALRLITPL--ERREVPALSRNVQQQQQQQQQQSQESNG 121

Query: 123 GELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELF 182
           GE+RRCNWIT  SDK YV+FHDECWGVPVYDDN+LFELLALSGMLMDYNWTEI+KR++LF
Sbjct: 122 GEIRRCNWITKNSDKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKQLF 181

Query: 183 REAFAGFEPSTVANMGEKEITDIASDKAIMLVESR-------------IARDFGSFSNYM 242
           REAFAGF+P+ VANMGEKEI DIAS+KAIML +SR             IAR+FGSFS++M
Sbjct: 182 REAFAGFDPNIVANMGEKEILDIASNKAIMLADSRVRCIVDNAKCIAKIAREFGSFSSFM 241

Query: 243 WSYMNFKPTINRFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHL 297
           W ++N+KPTIN++++PRNVPLR+PKAEAISKD++KRGFRFVGPVIVYSFMQAAGLTIDHL
Sbjct: 242 WGHVNYKPTINKYKYPRNVPLRTPKAEAISKDLLKRGFRFVGPVIVYSFMQAAGLTIDHL 301

[Close]
BLAST of Lsi04G003420 vs. TrEMBL
Match: B9HWT9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s14710g PE=4 SV=2)

HSP 1 Score: 433.7 bits (1114), Expect = 1.8e-118
Identity = 225/317 (70.98%), Postives = 264/317 (83.28%), Query Frame = 1 

Query: 4   KATVRRQILERQTCP-KEKDR---TSQHILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQ 63
           KA VR+QILE+     KEK++    +Q + SKHLK++YPIGL R+TSSLSLSS+SLSLSQ
Sbjct: 3   KANVRKQILEKNNILIKEKEKPISNTQGLFSKHLKRVYPIGLHRSTSSLSLSSVSLSLSQ 62

Query: 64  NSNDSSLTDSS-IQLDQKISYAIRLITPPPPERREVPLPKSIQ------QQSQELSDGEL 123
           NSNDSSLTDSS + L+QKIS A+RLI+P   ERREVP+ ++ Q      QQ+Q+ +DGE+
Sbjct: 63  NSNDSSLTDSSAVPLEQKISLALRLISPL--ERREVPVARNFQPQQQQQQQNQDSNDGEV 122

Query: 124 RRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREA 183
           +RCNWIT  SDK YV+FHDECWGVPVYDDN+LFELLALSGMLMDYNWTEI+KR+ELFREA
Sbjct: 123 KRCNWITKNSDKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFREA 182

Query: 184 FAGFEPSTVANMGEKEITDIASDKAIMLVESR-------------IARDFGSFSNYMWSY 243
           F GF+P+ VA MGEKEI +IAS+KAIML ESR             IAR+FGSFSNYMW  
Sbjct: 183 FEGFDPNIVAKMGEKEIMEIASNKAIMLAESRVRCIVDNSKCILKIAREFGSFSNYMWGN 242

Query: 244 MNFKPTINRFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDC 297
           +NFKPTINR+++PRNVPLRSPKAEAISKD++KRGFRF GPVIVYSFMQAAGLTIDHLVDC
Sbjct: 243 VNFKPTINRYKYPRNVPLRSPKAEAISKDLLKRGFRFAGPVIVYSFMQAAGLTIDHLVDC 302

[Close]
BLAST of Lsi04G003420 vs. TrEMBL
Match: A0A061E9D7_THECC (DNA glycosylase superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_011427 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 5.2e-118
Identity = 225/318 (70.75%), Postives = 260/318 (81.76%), Query Frame = 1 

Query: 3   SKATVRRQILERQTCPKEKDRTSQHILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQNSN 62
           SKA VRR ILE+   PKEK++ +Q +LSKHLKKIYPIGLQR+TSSLSLSSLSLSLSQNSN
Sbjct: 7   SKANVRRHILEKNRSPKEKEKPAQSVLSKHLKKIYPIGLQRSTSSLSLSSLSLSLSQNSN 66

Query: 63  DSSLTD-SSIQLDQKISYAIRLITPPPPERRE--VPLPKSIQ--------QQSQELSDGE 122
           DSSLTD SS  L+QKIS A+ LI P   ERRE  VP+ KS+Q        Q SQ+   GE
Sbjct: 67  DSSLTDHSSTPLEQKISLALSLIAPHH-ERREFVVPVVKSVQHHHHQQQQQPSQDPGSGE 126

Query: 123 LRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFRE 182
           LRRCNW+T  SDK YVSFHDE WGVPVYDDN+LFELLALSGMLMDYNWTEI+KR+EL+RE
Sbjct: 127 LRRCNWVTKNSDKVYVSFHDEQWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELYRE 186

Query: 183 AFAGFEPSTVANMGEKEITDIASDKAIMLVESR-------------IARDFGSFSNYMWS 242
           AF+GF+P  VA MG+KEI +I+SDKAIML ESR             I R++GSFS++MW 
Sbjct: 187 AFSGFDPEIVAKMGDKEINEISSDKAIMLAESRVRCIVDNAKCILKIVREYGSFSSFMWG 246

Query: 243 YMNFKPTINRFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVD 297
           Y+N+KPTINR+++PRNVPLR+PKAEAIS+D++KRGFRFVGPVIV SFMQAAGLTIDHLVD
Sbjct: 247 YVNYKPTINRYKYPRNVPLRTPKAEAISRDLLKRGFRFVGPVIVCSFMQAAGLTIDHLVD 306

[Close]
BLAST of Lsi04G003420 vs. TAIR10
Match: AT1G13635.1 (AT1G13635.1 DNA glycosylase superfamily protein)

HSP 1 Score: 375.2 bits (962), Expect = 3.8e-104
Identity = 196/306 (64.05%), Postives = 241/306 (78.76%), Query Frame = 1 

Query: 8   RRQILERQTCPKEKD-RTSQHILSKHLKKIYPIGLQRTTSS-LSLSSLSLSLSQNSNDSS 67
           R++I+E+    +EK+ + + +  +KHLK+IYPI LQR+TSS  SLSS+SLSLSQNS DS 
Sbjct: 8   RKEIVEKSKSVREKEIKQNSNFFAKHLKRIYPITLQRSTSSSFSLSSISLSLSQNSTDSV 67

Query: 68  LTDSSIQLDQKISYAIRLITPPPPERREVPLPKSIQQQ-SQEL-SDGELRRCNWITHTSD 127
            TDS+  L+QKIS A+ LI+   P RRE+ +PKSI QQ  Q+  S  E +RCNWIT  SD
Sbjct: 68  STDSNSTLEQKISLALGLIS--SPHRREIFVPKSIPQQLCQDFNSSDEPKRCNWITKKSD 127

Query: 128 KAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEPSTVAN 187
           + YV FHD+ WGVPVYDDN LFE LA+SGMLMDYNWTEI+KR+E FREAF  F+P+ VA 
Sbjct: 128 EVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRKEHFREAFCEFDPNRVAK 187

Query: 188 MGEKEITDIASDKAIMLVESR-------------IARDFGSFSNYMWSYMNFKPTINRFR 247
           MGEKEI +IAS+KAIML ESR             +  +FGSFS+++W +M++KP IN+F+
Sbjct: 188 MGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVNEFGSFSSFVWGFMDYKPIINKFK 247

Query: 248 HPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVNLAE 297
           + RNVPLRSPKAE ISKDM+KRGFRFVGPVIV+SFMQAAGLTIDHLVDCFRHG+CV+LAE
Sbjct: 248 YSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQAAGLTIDHLVDCFRHGDCVSLAE 307

[Close]
BLAST of Lsi04G003420 vs. TAIR10
Match: AT5G57970.1 (AT5G57970.1 DNA glycosylase superfamily protein)

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-51
Identity = 90/192 (46.88%), Postives = 125/192 (65.10%), Query Frame = 1 

Query: 113 RRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREA 172
           +RC W+T  SD  Y+ FHDE WGVPV+DD RLFELL LSG L ++ W  I+ +R+ FRE 
Sbjct: 154 KRCTWVTPNSDPCYIVFHDEEWGVPVHDDKRLFELLVLSGALAEHTWPTILSKRQAFREV 213

Query: 173 FAGFEPSTVANMGEKEITDIASDKAIMLVESR-------------IARDFGSFSNYMWSY 232
           FA F+P+ +  + EK+I    S  + +L + +             +  ++GSF  Y+WS+
Sbjct: 214 FADFDPNAIVKINEKKIIGPGSPASTLLSDLKLRAVIENARQILKVIEEYGSFDKYIWSF 273

Query: 233 MNFKPTINRFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDC 292
           +  K  +++FR+ R VP ++PKAE ISKD+V+RGFR VGP +VYSFMQAAG+T DHL  C
Sbjct: 274 VKNKAIVSKFRYQRQVPAKTPKAEVISKDLVRRGFRSVGPTVVYSFMQAAGITNDHLTSC 333

[Close]
BLAST of Lsi04G003420 vs. TAIR10
Match: AT1G80850.1 (AT1G80850.1 DNA glycosylase superfamily protein)

HSP 1 Score: 199.9 bits (507), Expect = 2.2e-51
Identity = 107/261 (41.00%), Postives = 161/261 (61.69%), Query Frame = 1 

Query: 48  LSLSSLSLSLSQNSNDSSLTDSSIQLDQKISYAIRLITPPPPERREVPLPKSIQQQSQEL 107
           L  + +S++ S +S+ SS  +SS       S   R++           L +++ ++  E 
Sbjct: 65  LRRNGISMTASYSSDASSSCESSPLSMTSTSSGKRVLRRSGSVSSSSSLRRNLTEERDEK 124

Query: 108 S-----DGELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEI 167
           +     DG  +RC WIT  SD+ Y++FHDE WGVPV+DD RLFELL+LSG L + +W +I
Sbjct: 125 ASDCFCDGR-KRCAWITPKSDQCYIAFHDEEWGVPVHDDKRLFELLSLSGALAELSWKDI 184

Query: 168 VKRRELFREAFAGFEPSTVANMGEKEITD--------IASDKAIMLVES-----RIARDF 227
           + +R+LFRE F  F+P  ++ +  K+IT         ++  K   ++E+     +I   F
Sbjct: 185 LSKRQLFREVFMDFDPIAISELTNKKITSPEIAATTLLSEQKLRSILENANQVCKIIGAF 244

Query: 228 GSFSNYMWSYMNFKPTINRFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAA 287
           GSF  Y+W+++N KPT ++FR+PR VP+++ KAE ISKD+V+RGFR V P ++YSFMQ A
Sbjct: 245 GSFDKYIWNFVNQKPTQSQFRYPRQVPVKTSKAELISKDLVRRGFRSVSPTVIYSFMQTA 304

Query: 288 GLTIDHLVDCFRHGECVNLAE 291
           GLT DHL  CFRH +C+   E
Sbjct: 305 GLTNDHLTCCFRHHDCMTKDE 324

[Close]
BLAST of Lsi04G003420 vs. TAIR10
Match: AT5G44680.1 (AT5G44680.1 DNA glycosylase superfamily protein)

HSP 1 Score: 199.1 bits (505), Expect = 3.7e-51
Identity = 94/205 (45.85%), Postives = 136/205 (66.34%), Query Frame = 1 

Query: 98  KSIQQQSQELS--DGELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLM 157
           KS++   + L+    + +RC++IT +SD  YV++HD+ WGVPV+DDN LFELL L+G  +
Sbjct: 147 KSVKSNEKNLNVEHEKKKRCSFITTSSDPIYVAYHDKEWGVPVHDDNLLFELLVLTGAQV 206

Query: 158 DYNWTEIVKRRELFREAFAGFEPSTVANMGEKEITDIASDKAIMLVES-----------R 217
             +WT ++KRR  FREAF+GFE   VA+  EK+I  I +D  I L +            +
Sbjct: 207 GSDWTSVLKRRNTFREAFSGFEAELVADFNEKKIQSIVNDYGINLSQVLAVVDNAKQILK 266

Query: 218 IARDFGSFSNYMWSYMNFKPTINRFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYS 277
           + RD GSF+ Y+W +M  KP   ++   + +P+++ K+E ISKDMV+RGFRFVGP +++S
Sbjct: 267 VKRDLGSFNKYIWGFMKHKPVTTKYTSCQKIPVKTSKSETISKDMVRRGFRFVGPTVIHS 326

Query: 278 FMQAAGLTIDHLVDCFRHGECVNLA 290
            MQAAGLT DHL+ C RH EC  +A
Sbjct: 327 LMQAAGLTNDHLITCPRHLECTAMA 351

[Close]
BLAST of Lsi04G003420 vs. TAIR10
Match: AT1G75090.1 (AT1G75090.1 DNA glycosylase superfamily protein)

HSP 1 Score: 193.4 bits (490), Expect = 2.0e-49
Identity = 104/267 (38.95%), Postives = 152/267 (56.93%), Query Frame = 1 

Query: 43  RTTSSLSLSSLSLSLSQNSNDSSLTDSSIQLDQKISYAIRLITPPPPER-----REVPLP 102
           R T S +      + S +++DSS + SS +     +     +T P           V   
Sbjct: 44  RVTKSPATKKPDSNFSVSTDDSSSSSSSSERSSVNTTNSGKVTTPSKRNGVEKLNNVVAS 103

Query: 103 KSIQQQSQELSDGELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDY 162
            ++ +       G ++RC+WIT  SD  YV FHDE WGVPV DD +LFELL  S  L ++
Sbjct: 104 VAVVEDISPKIPGPVKRCHWITPNSDPIYVLFHDEEWGVPVRDDKKLFELLVFSQALAEF 163

Query: 163 NWTEIVKRRELFREAFAGFEPSTVANMGEKEITDIASDKAIMLVESR------------- 222
           +W  I++RR+ FR+ F  F+PS +A   EK +  +  +  ++L E +             
Sbjct: 164 SWPSILRRRDDFRKLFEEFDPSAIAQFTEKRLMSLRVNGCLILSEQKLRAIVENAKSVLK 223

Query: 223 IARDFGSFSNYMWSYMNFKPTINRFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYS 282
           + ++FGSFSNY W ++N KP  N +R+ R VP++SPKAE ISKDM++RGFR VGP ++YS
Sbjct: 224 VKQEFGSFSNYCWRFVNHKPLRNGYRYGRQVPVKSPKAEYISKDMMQRGFRCVGPTVMYS 283

Query: 283 FMQAAGLTIDHLVDCFRHGECVNLAER 292
           F+QA+G+  DHL  CFR+ EC    ER
Sbjct: 284 FLQASGIVNDHLTACFRYQECNVETER 310

[Close]
BLAST of Lsi04G003420 vs. NCBI nr
Match: gi|449435284|ref|XP_004135425.1| (PREDICTED: uncharacterized protein LOC101218195 [Cucumis sativus])

HSP 1 Score: 565.8 bits (1457), Expect = 4.3e-158
Identity = 287/309 (92.88%), Postives = 292/309 (94.50%), Query Frame = 1 

Query: 1   MSSKATVRRQILERQTCPKEKDRTSQHILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60
           MSSKATVRR ILERQ CPKEKDRTSQ+ILSKHLKKIYPIGLQRTTSSLSLSS+SLSLSQN
Sbjct: 1   MSSKATVRRHILERQACPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSMSLSLSQN 60

Query: 61  SNDSSLTDSSIQLDQKISYAIRLITPPPPERREVPLPKSIQQQSQELSDGELRRCNWITH 120
           SNDSSLTDSSIQLDQKISYAIRLITPPP ERREVPLPKSIQQQSQELSDGELRRCNWITH
Sbjct: 61  SNDSSLTDSSIQLDQKISYAIRLITPPP-ERREVPLPKSIQQQSQELSDGELRRCNWITH 120

Query: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEPST 180
           TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEPS 
Sbjct: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEPSV 180

Query: 181 VANMGEKEITDIASDKAIMLVESR-------------IARDFGSFSNYMWSYMNFKPTIN 240
           VANMGEKEITD+ASDKAIMLVESR             IARDFGSFSNYMWSY+NFKPTIN
Sbjct: 181 VANMGEKEITDVASDKAIMLVESRVRCIVDNAKCILKIARDFGSFSNYMWSYVNFKPTIN 240

Query: 241 RFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVN 297
           RFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHL+DCFRHGECVN
Sbjct: 241 RFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLIDCFRHGECVN 300

[Close]
BLAST of Lsi04G003420 vs. NCBI nr
Match: gi|659091306|ref|XP_008446481.1| (PREDICTED: uncharacterized protein LOC103489204 [Cucumis melo])

HSP 1 Score: 563.1 bits (1450), Expect = 2.8e-157
Identity = 288/309 (93.20%), Postives = 291/309 (94.17%), Query Frame = 1 

Query: 1   MSSKATVRRQILERQTCPKEKDRTSQHILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60
           MSSKATVRR ILERQ CPKEKDRTSQ+ILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN
Sbjct: 63  MSSKATVRRHILERQACPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 122

Query: 61  SNDSSLTDSSIQLDQKISYAIRLITPPPPERREVPLPKSIQQQSQELSDGELRRCNWITH 120
           SNDSSLTDSSIQLDQKISYAIRLITPPP ERREVPLPKSIQQQSQELSDGELRRCNWITH
Sbjct: 123 SNDSSLTDSSIQLDQKISYAIRLITPPP-ERREVPLPKSIQQQSQELSDGELRRCNWITH 182

Query: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEPST 180
           TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEPS 
Sbjct: 183 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEPSI 242

Query: 181 VANMGEKEITDIASDKAIMLVESR-------------IARDFGSFSNYMWSYMNFKPTIN 240
           VANMGEKEITDIASDKAIMLVESR             IARDFGSFSNYMWS +NFKPTIN
Sbjct: 243 VANMGEKEITDIASDKAIMLVESRVRCIVDNAKCILKIARDFGSFSNYMWSSVNFKPTIN 302

Query: 241 RFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVN 297
           RFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHL+DCFRHGECVN
Sbjct: 303 RFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLIDCFRHGECVN 362

[Close]
BLAST of Lsi04G003420 vs. NCBI nr
Match: gi|703081259|ref|XP_010091642.1| (Putative Glutamine amidotransferase [Morus notabilis])

HSP 1 Score: 441.0 bits (1133), Expect = 1.6e-120
Identity = 220/298 (73.83%), Postives = 256/298 (85.91%), Query Frame = 1 

Query: 4   KATVRRQILERQTCPKE---KDRTSQHILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 63
           KA VRR +LER    KE   KD+TS  +LSKHLK+IYPIGLQ++ SS SLSSLSLSLS+N
Sbjct: 3   KANVRRPVLERNGSLKENEKKDKTSPGLLSKHLKRIYPIGLQKSNSSPSLSSLSLSLSEN 62

Query: 64  SNDSSLTDSSIQLDQKISYAIRLITPPPPERREVPLPKSIQQQSQELSDG--ELRRCNWI 123
           SNDSSL D    LD KIS A+RL+   PP R+E P PK++QQQ  + ++   ELRRCNWI
Sbjct: 63  SNDSSLADFGSPLDHKISLALRLVA--PPRRKESPAPKNVQQQQSQDANNPEELRRCNWI 122

Query: 124 THTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEP 183
           T  SDK YV+FHDECWGVPVYDDN+LFELLA+SGMLMDYNWTEI+KRRELFREAF+GF+P
Sbjct: 123 TKNSDKVYVAFHDECWGVPVYDDNQLFELLAMSGMLMDYNWTEILKRRELFREAFSGFDP 182

Query: 184 STVANMGEKEITDIASDKAIMLVESRIARDFGSFSNYMWSYMNFKPTINRFRHPRNVPLR 243
           S VA MGEKEIT+I+S+KAIML ESR+ R+FGSFSNYMWSY++ KP INR+R+PRNVPLR
Sbjct: 183 SKVAKMGEKEITEISSNKAIMLAESRVVREFGSFSNYMWSYVDHKPVINRYRYPRNVPLR 242

Query: 244 SPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVNLAERPWRHI 297
           SPKAEAISKD++KRGFRFVGPVIV+SFMQAAGLTIDHLV+C+RH ECV+LAERPWRHI
Sbjct: 243 SPKAEAISKDLLKRGFRFVGPVIVHSFMQAAGLTIDHLVNCYRHYECVSLAERPWRHI 298

[Close]
BLAST of Lsi04G003420 vs. NCBI nr
Match: gi|255547045|ref|XP_002514580.1| (PREDICTED: DNA-3-methyladenine glycosylase [Ricinus communis])

HSP 1 Score: 436.4 bits (1121), Expect = 3.9e-119
Identity = 228/320 (71.25%), Postives = 270/320 (84.38%), Query Frame = 1 

Query: 3   SKATVRRQILERQTC-PKEKDRTSQHIL---SKHLKKIYPIGLQRTTSSLSLSSLSLSLS 62
           SKATVR+Q+LE+++    EK+RT+ + L   SK+LKK+YPIGL R+ SSLSLSS+SLSLS
Sbjct: 2   SKATVRKQVLEKKSIFTNEKERTTSNQLGFFSKNLKKVYPIGLHRSNSSLSLSSVSLSLS 61

Query: 63  QNSNDSSLTD-SSIQLDQKISYAIRLITPPPPERREVP-LPKSIQQQ-------SQELSD 122
           +NSNDSSLTD S+  LDQKIS A+RLITP   ERREVP L +++QQQ       SQE + 
Sbjct: 62  ENSNDSSLTDYSNTPLDQKISLALRLITPL--ERREVPALSRNVQQQQQQQQQQSQESNG 121

Query: 123 GELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELF 182
           GE+RRCNWIT  SDK YV+FHDECWGVPVYDDN+LFELLALSGMLMDYNWTEI+KR++LF
Sbjct: 122 GEIRRCNWITKNSDKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKQLF 181

Query: 183 REAFAGFEPSTVANMGEKEITDIASDKAIMLVESR-------------IARDFGSFSNYM 242
           REAFAGF+P+ VANMGEKEI DIAS+KAIML +SR             IAR+FGSFS++M
Sbjct: 182 REAFAGFDPNIVANMGEKEILDIASNKAIMLADSRVRCIVDNAKCIAKIAREFGSFSSFM 241

Query: 243 WSYMNFKPTINRFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHL 297
           W ++N+KPTIN++++PRNVPLR+PKAEAISKD++KRGFRFVGPVIVYSFMQAAGLTIDHL
Sbjct: 242 WGHVNYKPTINKYKYPRNVPLRTPKAEAISKDLLKRGFRFVGPVIVYSFMQAAGLTIDHL 301

[Close]
BLAST of Lsi04G003420 vs. NCBI nr
Match: gi|743797932|ref|XP_011009373.1| (PREDICTED: uncharacterized protein LOC105114510 [Populus euphratica])

HSP 1 Score: 434.9 bits (1117), Expect = 1.1e-118
Identity = 225/317 (70.98%), Postives = 266/317 (83.91%), Query Frame = 1 

Query: 4   KATVRRQILERQTCP-KEKDR---TSQHILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQ 63
           KA VR+QILE+     KEK++   ++Q + SKHLK++YPIGL R+TSSLSLSS+SLSLSQ
Sbjct: 3   KANVRKQILEKNNISIKEKEKPISSTQGLFSKHLKRVYPIGLHRSTSSLSLSSVSLSLSQ 62

Query: 64  NSNDSSLTDSS-IQLDQKISYAIRLITPPPPERREVPLPKSIQ------QQSQELSDGEL 123
           NSNDSSLTDSS + L+QKIS A+RLI+P   ERREVP+ ++ Q      QQ+Q+ +DGE+
Sbjct: 63  NSNDSSLTDSSAVPLEQKISLALRLISPL--ERREVPVARNFQPQQQQQQQNQDSNDGEV 122

Query: 124 RRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREA 183
           +RCNWIT  SDK YV+FHDECWGVPVYDDN+LFELLALSGMLMDYNWTEI+KR+ELFREA
Sbjct: 123 KRCNWITKNSDKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFREA 182

Query: 184 FAGFEPSTVANMGEKEITDIASDKAIMLVESR-------------IARDFGSFSNYMWSY 243
           F GF+P+ VA MGEKEI +IAS+KAI+L ESR             IAR+FGSFSNYMW  
Sbjct: 183 FEGFDPNIVAKMGEKEIMEIASNKAIILAESRVRCIVDNSKCILKIAREFGSFSNYMWGN 242

Query: 244 MNFKPTINRFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDC 297
           +NFKPTINR+++PRNVPLRSPKAEAISKD++KRGFRFVGPVIVYSFMQAAGLTIDHLVDC
Sbjct: 243 VNFKPTINRYKYPRNVPLRSPKAEAISKDLLKRGFRFVGPVIVYSFMQAAGLTIDHLVDC 302

The following BLAST results are available for this feature:
BLAST of Lsi04G003420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GUAA_HELHP6.0e-3536.76Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter hepaticus (strain ... [more]
3MG1_ECOLI5.8e-3034.25DNA-3-methyladenine glycosylase 1 OS=Escherichia coli (strain K12) GN=tag PE=1 S... [more]
3MGA_HAEIN7.1e-2834.08DNA-3-methyladenine glycosylase OS=Haemophilus influenzae (strain ATCC 51907 / D... [more]
BLAST of Lsi04G003420 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUC5_CUCSA3.0e-15892.88Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606920 PE=4 SV=1[more]
W9QWE1_9ROSA1.1e-12073.83Putative Glutamine amidotransferase OS=Morus notabilis GN=L484_026493 PE=4 SV=1[more]
B9RLG1_RICCO2.7e-11971.25DNA-3-methyladenine glycosylase, putative OS=Ricinus communis GN=RCOM_1466540 PE... [more]
B9HWT9_POPTR1.8e-11870.98Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s14710g PE=4 SV=2[more]
A0A061E9D7_THECC5.2e-11870.75DNA glycosylase superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_011427 P... [more]
BLAST of Lsi04G003420 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13635.13.8e-10464.05 DNA glycosylase superfamily protein[more]
AT5G57970.11.3e-5146.88 DNA glycosylase superfamily protein[more]
AT1G80850.12.2e-5141.00 DNA glycosylase superfamily protein[more]
AT5G44680.13.7e-5145.85 DNA glycosylase superfamily protein[more]
AT1G75090.12.0e-4938.95 DNA glycosylase superfamily protein[more]
BLAST of Lsi04G003420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435284|ref|XP_004135425.1|4.3e-15892.88PREDICTED: uncharacterized protein LOC101218195 [Cucumis sativus][more]
gi|659091306|ref|XP_008446481.1|2.8e-15793.20PREDICTED: uncharacterized protein LOC103489204 [Cucumis melo][more]
gi|703081259|ref|XP_010091642.1|1.6e-12073.83Putative Glutamine amidotransferase [Morus notabilis][more]
gi|255547045|ref|XP_002514580.1|3.9e-11971.25PREDICTED: DNA-3-methyladenine glycosylase [Ricinus communis][more]
gi|743797932|ref|XP_011009373.1|1.1e-11870.98PREDICTED: uncharacterized protein LOC105114510 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006284base-excision repair
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0008725DNA-3-methyladenine glycosylase activity
Vocabulary: INTERPRO
TermDefinition
IPR011257DNA_glycosylase
IPR005019Adenine_glyco
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006284 base-excision repair
biological_process GO:0006541 glutamine metabolic process
biological_process GO:0006281 DNA repair
cellular_component GO:0005575 cellular_component
molecular_function GO:0008725 DNA-3-methyladenine glycosylase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0003824 catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G003420.1Lsi04G003420.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005019Methyladenine glycosylasePFAMPF03352Adenine_glycocoord: 121..282
score: 7.6
IPR011257DNA glycosylaseGENE3DG3DSA:1.10.340.30coord: 113..282
score: 1.6
IPR011257DNA glycosylaseunknownSSF48150DNA-glycosylasecoord: 113..286
score: 2.59
NoneNo IPR availablePANTHERPTHR31116FAMILY NOT NAMEDcoord: 1..296
score: 1.4E
NoneNo IPR availablePANTHERPTHR31116:SF23-METHYLADENINE GLYCOSYLASE I-RELATEDcoord: 1..296
score: 1.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi04G003420Csa5G606920Cucumber (Chinese Long) v2culsiB368
Lsi04G003420CSPI05G24530Wild cucumber (PI 183967)cpilsiB372
Lsi04G003420Cucsa.284320Cucumber (Gy14) v1cgylsiB465
Lsi04G003420CmaCh04G015740Cucurbita maxima (Rimu)cmalsiB669
Lsi04G003420CmoCh04G016460Cucurbita moschata (Rifu)cmolsiB660
Lsi04G003420Cla020322Watermelon (97103) v1lsiwmB312
Lsi04G003420MELO3C012172Melon (DHL92) v3.5.1lsimeB281
Lsi04G003420ClCG05G023500Watermelon (Charleston Gray)lsiwcgB283
Lsi04G003420MELO3C012172.2Melon (DHL92) v3.6.1lsimedB297
Lsi04G003420Cla97C05G105500Watermelon (97103) v2lsiwmbB284
Lsi04G003420Bhi07G001199Wax gourdlsiwgoB380
Lsi04G003420Cp4.1LG01g13260Cucurbita pepo (Zucchini)cpelsiB352
Lsi04G003420CsGy5G024020Cucumber (Gy14) v2cgyblsiB337
Lsi04G003420Carg01776Silver-seed gourdcarlsiB767
Lsi04G003420CsaV3_5G033540Cucumber (Chinese Long) v3cuclsiB393
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G003420Bottle gourd (USVL1VR-Ls)lsilsiB138
Lsi04G003420Cucurbita maxima (Rimu)cmalsiB058
Lsi04G003420Cucurbita maxima (Rimu)cmalsiB123
Lsi04G003420Cucurbita maxima (Rimu)cmalsiB379
Lsi04G003420Cucurbita moschata (Rifu)cmolsiB046
Lsi04G003420Cucurbita moschata (Rifu)cmolsiB114
Lsi04G003420Cucurbita moschata (Rifu)cmolsiB364
Lsi04G003420Cucurbita pepo (Zucchini)cpelsiB032
Lsi04G003420Melon (DHL92) v3.5.1lsimeB294
Lsi04G003420Watermelon (Charleston Gray)lsiwcgB293
Lsi04G003420Watermelon (97103) v1lsiwmB341
Lsi04G003420Melon (DHL92) v3.6.1lsimedB307
Lsi04G003420Silver-seed gourdcarlsiB091
Lsi04G003420Silver-seed gourdcarlsiB539
Lsi04G003420Watermelon (97103) v2lsiwmbB294