Cp4.1LG01g13260 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g13260
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDNA-3-methyladenine glycosylase, putative
LocationCp4.1LG01 : 8401869 .. 8403156 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCCAAAGCCACTGTTAGAAGACGAATTCTGGAGAGGCAAACATGTCCTAAAGAGAAAGATAGAACAAGCCAAAACATATTGTCTAAACACCTTAAGAAGATTTACCCAATTGGGCTTCAAAGAACCACTTCATCACTCTCTTTATCTTCATTTTCATTGTCTTTGTCCCAAAATTCAAATGATTCTTCTCTTACAGACTCCTCGATCCAACTCGATCAGAAGATTTCGTATGCGATTCGTTTGATTACACCGCCGCCGCCGCCCCCTCCTGAAAGAAGAGAAGCTCCATTGCCTAAGAGTGTCCAACAACAATGTCAGGAACTTGGTGATGGGGAACTCAGGAGATGCAACTGGATCACTCATACCAGTGGTAAGATTACACTTAGTTCTGATATGGACTTAGAATACTTTCCACCACATTGCTAGACTAGTTCATGCTTGACGTTTCTATCTCGTGTACTCGACGCAGATAAAGCCTATGTATCCTTTCACGACGAGTGTTGGGGCGTCCCGGTGTATGACGACAAGTAGGTGATCTAAGTAGCTTTTCATTTATCCTGCATATCAGTTTATAGATTTGTGAGTTGACATCAGAGAAAAATTACCATACAGCCGACTTTTCGAGCTACTCGCTCTATCGGGGATGCTGATGGACTACAATTGGACTGAAATTGTGAAAAGAAGGGAACTATTCAGGTAATAGTTTCTGATCCAATGTGTACTTTGGATGAACATCTATGAGAAGATTAATGTATATATACACATCTGGTTGGTCATAGAGAAGCTTTTGCTGGATTTGAGGCAAGTACTGTGGCCAACATGGGGGAGAAAGAGATAGCAGACATAGCATCTGACAAGGCCATTATGCTGGTGGAGAGCAGAGTGAGGTGCATAGTAGACAATGCCAAGTGCATATTGAAGGCAAGCTAGATCACCTCATTTTTTAACCAACTCTTTCACAGAATGTATATTAACAAGAACTGGTTTTTTGATTCAACTGCAGATAGCTAGAGATTTTGGGTCGTTCAGTAACTATATGTGGAGCTATATGAACTTCAAACCAACAATAAACAGATTTAGATATCCAAGAAATGTTCCCCTGAGGAGTCCCAAAGCAGAAGCCATTAGCAAGGACATGGTGAAGCGCGGTTTTCGGTTTGTTGGGCCAGTGATCGTCTATTCGTTCATGCAGGCGGCAGGGTTGACGATCGATCATCTTGTGGACTGTTTTCGGCATGGCGAATGTGTAAATCTTGCAGAAAGACCATGGAGACATATCTGA

mRNA sequence

ATGTCATCCAAAGCCACTGTTAGAAGACGAATTCTGGAGAGGCAAACATGTCCTAAAGAGAAAGATAGAACAAGCCAAAACATATTGTCTAAACACCTTAAGAAGATTTACCCAATTGGGCTTCAAAGAACCACTTCATCACTCTCTTTATCTTCATTTTCATTGTCTTTGTCCCAAAATTCAAATGATTCTTCTCTTACAGACTCCTCGATCCAACTCGATCAGAAGATTTCGTATGCGATTCGTTTGATTACACCGCCGCCGCCGCCCCCTCCTGAAAGAAGAGAAGCTCCATTGCCTAAGAGTGTCCAACAACAATGTCAGGAACTTGGTGATGGGGAACTCAGGAGATGCAACTGGATCACTCATACCAGTGATAAAGCCTATGTATCCTTTCACGACGAGTGTTGGGGCGTCCCGGTGTATGACGACAACCGACTTTTCGAGCTACTCGCTCTATCGGGGATGCTGATGGACTACAATTGGACTGAAATTGTGAAAAGAAGGGAACTATTCAGAGAAGCTTTTGCTGGATTTGAGGCAAGTACTGTGGCCAACATGGGGGAGAAAGAGATAGCAGACATAGCATCTGACAAGGCCATTATGCTGGTGGAGAGCAGAATAGCTAGAGATTTTGGGTCGTTCAGTAACTATATGTGGAGCTATATGAACTTCAAACCAACAATAAACAGATTTAGATATCCAAGAAATGTTCCCCTGAGGAGTCCCAAAGCAGAAGCCATTAGCAAGGACATGGTGAAGCGCGGTTTTCGGTTTGTTGGGCCAGTGATCGTCTATTCGTTCATGCAGGCGGCAGGGTTGACGATCGATCATCTTGTGGACTGTTTTCGGCATGGCGAATGTGTAAATCTTGCAGAAAGACCATGGAGACATATCTGA

Coding sequence (CDS)

ATGTCATCCAAAGCCACTGTTAGAAGACGAATTCTGGAGAGGCAAACATGTCCTAAAGAGAAAGATAGAACAAGCCAAAACATATTGTCTAAACACCTTAAGAAGATTTACCCAATTGGGCTTCAAAGAACCACTTCATCACTCTCTTTATCTTCATTTTCATTGTCTTTGTCCCAAAATTCAAATGATTCTTCTCTTACAGACTCCTCGATCCAACTCGATCAGAAGATTTCGTATGCGATTCGTTTGATTACACCGCCGCCGCCGCCCCCTCCTGAAAGAAGAGAAGCTCCATTGCCTAAGAGTGTCCAACAACAATGTCAGGAACTTGGTGATGGGGAACTCAGGAGATGCAACTGGATCACTCATACCAGTGATAAAGCCTATGTATCCTTTCACGACGAGTGTTGGGGCGTCCCGGTGTATGACGACAACCGACTTTTCGAGCTACTCGCTCTATCGGGGATGCTGATGGACTACAATTGGACTGAAATTGTGAAAAGAAGGGAACTATTCAGAGAAGCTTTTGCTGGATTTGAGGCAAGTACTGTGGCCAACATGGGGGAGAAAGAGATAGCAGACATAGCATCTGACAAGGCCATTATGCTGGTGGAGAGCAGAATAGCTAGAGATTTTGGGTCGTTCAGTAACTATATGTGGAGCTATATGAACTTCAAACCAACAATAAACAGATTTAGATATCCAAGAAATGTTCCCCTGAGGAGTCCCAAAGCAGAAGCCATTAGCAAGGACATGGTGAAGCGCGGTTTTCGGTTTGTTGGGCCAGTGATCGTCTATTCGTTCATGCAGGCGGCAGGGTTGACGATCGATCATCTTGTGGACTGTTTTCGGCATGGCGAATGTGTAAATCTTGCAGAAAGACCATGGAGACATATCTGA

Protein sequence

MSSKATVRRRILERQTCPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSFSLSLSQNSNDSSLTDSSIQLDQKISYAIRLITPPPPPPPERREAPLPKSVQQQCQELGDGELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEASTVANMGEKEIADIASDKAIMLVESRIARDFGSFSNYMWSYMNFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVNLAERPWRHI
Homology
[Close]
BLAST of Cp4.1LG01g13260 vs. Swiss-Prot
Match: GUAA_HELHP (Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter hepaticus (strain ATCC 51449 / 3B1) GN=guaA PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.0e-33
Identity = 74/204 (36.27%), Postives = 113/204 (55.39%), Query Frame = 1 

Query: 99  LPKSVQQQCQELGDG--ELRRCNWITHTSD---KAYVSFHDECWGVPVYDDNRLFELLAL 158
           L KS+  + Q+  +G  E  RC W T   +   K Y  +HD  WG P+++D +LFE L L
Sbjct: 767 LQKSLGLEAQDSNEGVREKVRCAWATDKDEAARKLYEDYHDTEWGEPLHEDKKLFEHLVL 826

Query: 159 SGMLMDYNWTEIVKRRELFREAFAGFEASTVANMGEKEIADIASDKAIMLVESRI----- 218
            G     +W  I+K+RE FR AF  F+   VAN  E +I ++  ++ I+   ++I     
Sbjct: 827 EGFQAGLSWITILKKREAFRVAFDDFDPHIVANYDEDKIKELMRNEGIIRNRAKIEAAII 886

Query: 219 --------ARDFGSFSNYMWSYMNFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFV 278
                    R+FGSF  Y+W ++  KP IN F    ++P  +P ++ I+KD+ KRGF+FV
Sbjct: 887 NAKAFMAVQREFGSFDKYIWGFVGGKPIINAFESIADLPASTPLSDKIAKDLKKRGFKFV 946

Query: 279 GPVIVYSFMQAAGLTIDHLVDCFR 285
           G   +Y+ MQ+ G+  DHL  CF+
Sbjct: 947 GTTTMYAMMQSIGMVNDHLTSCFK 970

[Close]
BLAST of Cp4.1LG01g13260 vs. Swiss-Prot
Match: 3MG1_ECOLI (DNA-3-methyladenine glycosylase 1 OS=Escherichia coli (strain K12) GN=tag PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.1e-28
Identity = 61/181 (33.70%), Postives = 99/181 (54.70%), Query Frame = 1 

Query: 115 LRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFRE 174
           + RC W++   D  Y+++HD  WGVP  D  +LFE++ L G     +W  ++K+RE +R 
Sbjct: 1   MERCGWVSQ--DPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRA 60

Query: 175 AFAGFEASTVANMGEKEIADIASDKAIMLVESRIARDFGS-------------FSNYMWS 234
            F  F+   VA M E+++  +  D  I+    +I    G+             F +++WS
Sbjct: 61  CFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFVDFVWS 120

Query: 235 YMNFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVD 283
           ++N +P + +      +P  +  ++A+SK + KRGF+FVG  I YSFMQA GL  DH+V 
Sbjct: 121 FVNHQPQVTQATTLSEIPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVG 179

[Close]
BLAST of Cp4.1LG01g13260 vs. Swiss-Prot
Match: 3MGA_HAEIN (DNA-3-methyladenine glycosylase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=tag PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.0e-26
Identity = 60/179 (33.52%), Postives = 100/179 (55.87%), Query Frame = 1 

Query: 117 RCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAF 176
           RC W+   S   Y+ +HD+ WG P +D  +LFE + L G     +W  ++K+RE +REAF
Sbjct: 4   RCPWVGEQS--IYIDYHDKEWGKPEFDSQKLFEKICLEGQQAGLSWITVLKKRESYREAF 63

Query: 177 AGFEASTVANMGEKEIADIASDKAIMLVESRI------ARDF-------GSFSNYMWSYM 236
             F+   +A M   +I     +  ++   +++      A+ +        +FS+++WS++
Sbjct: 64  HQFDPKKIAKMTALDIDACMQNSGLIRHRAKLEAIVKNAKAYLAMEKCGENFSDFIWSFV 123

Query: 237 NFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDC 283
           N KP +N     R+VP ++  ++A+SK + KRGF F+G    Y+FMQ+ GL  DHL DC
Sbjct: 124 NHKPIVNDVPDLRSVPTKTEVSKALSKALKKRGFVFIGETTCYAFMQSMGLVDDHLNDC 180

[Close]
BLAST of Cp4.1LG01g13260 vs. TrEMBL
Match: A0A0A0KUC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606920 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 2.7e-154
Identity = 281/312 (90.06%), Postives = 286/312 (91.67%), Query Frame = 1 

Query: 1   MSSKATVRRRILERQTCPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSFSLSLSQN 60
           MSSKATVRR ILERQ CPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSS SLSLSQN
Sbjct: 1   MSSKATVRRHILERQACPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSMSLSLSQN 60

Query: 61  SNDSSLTDSSIQLDQKISYAIRLITPPPPPPPERREAPLPKSVQQQCQELGDGELRRCNW 120
           SNDSSLTDSSIQLDQKISYAIRLITPPP    ERRE PLPKS+QQQ QEL DGELRRCNW
Sbjct: 61  SNDSSLTDSSIQLDQKISYAIRLITPPP----ERREVPLPKSIQQQSQELSDGELRRCNW 120

Query: 121 ITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFE 180
           ITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFE
Sbjct: 121 ITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFE 180

Query: 181 ASTVANMGEKEIADIASDKAIMLVESR-------------IARDFGSFSNYMWSYMNFKP 240
            S VANMGEKEI D+ASDKAIMLVESR             IARDFGSFSNYMWSY+NFKP
Sbjct: 181 PSVVANMGEKEITDVASDKAIMLVESRVRCIVDNAKCILKIARDFGSFSNYMWSYVNFKP 240

Query: 241 TINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGE 300
           TINRFR+PRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHL+DCFRHGE
Sbjct: 241 TINRFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLIDCFRHGE 300

[Close]
BLAST of Cp4.1LG01g13260 vs. TrEMBL
Match: W9QWE1_9ROSA (Putative Glutamine amidotransferase OS=Morus notabilis GN=L484_026493 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 6.2e-119
Identity = 219/301 (72.76%), Postives = 253/301 (84.05%), Query Frame = 1 

Query: 4   KATVRRRILERQTCPKE---KDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSFSLSLSQN 63
           KA VRR +LER    KE   KD+TS  +LSKHLK+IYPIGLQ++ SS SLSS SLSLS+N
Sbjct: 3   KANVRRPVLERNGSLKENEKKDKTSPGLLSKHLKRIYPIGLQKSNSSPSLSSLSLSLSEN 62

Query: 64  SNDSSLTDSSIQLDQKISYAIRLITPPPPPPPERREAPLPKSVQQQCQELGDG--ELRRC 123
           SNDSSL D    LD KIS A+RL+ PP      R+E+P PK+VQQQ  +  +   ELRRC
Sbjct: 63  SNDSSLADFGSPLDHKISLALRLVAPP-----RRKESPAPKNVQQQQSQDANNPEELRRC 122

Query: 124 NWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAG 183
           NWIT  SDK YV+FHDECWGVPVYDDN+LFELLA+SGMLMDYNWTEI+KRRELFREAF+G
Sbjct: 123 NWITKNSDKVYVAFHDECWGVPVYDDNQLFELLAMSGMLMDYNWTEILKRRELFREAFSG 182

Query: 184 FEASTVANMGEKEIADIASDKAIMLVESRIARDFGSFSNYMWSYMNFKPTINRFRYPRNV 243
           F+ S VA MGEKEI +I+S+KAIML ESR+ R+FGSFSNYMWSY++ KP INR+RYPRNV
Sbjct: 183 FDPSKVAKMGEKEITEISSNKAIMLAESRVVREFGSFSNYMWSYVDHKPVINRYRYPRNV 242

Query: 244 PLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVNLAERPWRH 300
           PLRSPKAEAISKD++KRGFRFVGPVIV+SFMQAAGLTIDHLV+C+RH ECV+LAERPWRH
Sbjct: 243 PLRSPKAEAISKDLLKRGFRFVGPVIVHSFMQAAGLTIDHLVNCYRHYECVSLAERPWRH 298

[Close]
BLAST of Cp4.1LG01g13260 vs. TrEMBL
Match: B9RLG1_RICCO (DNA-3-methyladenine glycosylase, putative OS=Ricinus communis GN=RCOM_1466540 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.6e-117
Identity = 227/323 (70.28%), Postives = 265/323 (82.04%), Query Frame = 1 

Query: 3   SKATVRRRILERQTC-PKEKDRTSQNIL---SKHLKKIYPIGLQRTTSSLSLSSFSLSLS 62
           SKATVR+++LE+++    EK+RT+ N L   SK+LKK+YPIGL R+ SSLSLSS SLSLS
Sbjct: 2   SKATVRKQVLEKKSIFTNEKERTTSNQLGFFSKNLKKVYPIGLHRSNSSLSLSSVSLSLS 61

Query: 63  QNSNDSSLTD-SSIQLDQKISYAIRLITPPPPPPPERREAP-LPKSVQQQ-------CQE 122
           +NSNDSSLTD S+  LDQKIS A+RLITP      ERRE P L ++VQQQ        QE
Sbjct: 62  ENSNDSSLTDYSNTPLDQKISLALRLITPL-----ERREVPALSRNVQQQQQQQQQQSQE 121

Query: 123 LGDGELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRR 182
              GE+RRCNWIT  SDK YV+FHDECWGVPVYDDN+LFELLALSGMLMDYNWTEI+KR+
Sbjct: 122 SNGGEIRRCNWITKNSDKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRK 181

Query: 183 ELFREAFAGFEASTVANMGEKEIADIASDKAIMLVESR-------------IARDFGSFS 242
           +LFREAFAGF+ + VANMGEKEI DIAS+KAIML +SR             IAR+FGSFS
Sbjct: 182 QLFREAFAGFDPNIVANMGEKEILDIASNKAIMLADSRVRCIVDNAKCIAKIAREFGSFS 241

Query: 243 NYMWSYMNFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTI 300
           ++MW ++N+KPTIN+++YPRNVPLR+PKAEAISKD++KRGFRFVGPVIVYSFMQAAGLTI
Sbjct: 242 SFMWGHVNYKPTINKYKYPRNVPLRTPKAEAISKDLLKRGFRFVGPVIVYSFMQAAGLTI 301

[Close]
BLAST of Cp4.1LG01g13260 vs. TrEMBL
Match: A0A061E9D7_THECC (DNA glycosylase superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_011427 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 1.7e-116
Identity = 224/321 (69.78%), Postives = 258/321 (80.37%), Query Frame = 1 

Query: 3   SKATVRRRILERQTCPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSFSLSLSQNSN 62
           SKA VRR ILE+   PKEK++ +Q++LSKHLKKIYPIGLQR+TSSLSLSS SLSLSQNSN
Sbjct: 7   SKANVRRHILEKNRSPKEKEKPAQSVLSKHLKKIYPIGLQRSTSSLSLSSLSLSLSQNSN 66

Query: 63  DSSLTD-SSIQLDQKISYAIRLITPPPPPPPERRE--APLPKSVQ--------QQCQELG 122
           DSSLTD SS  L+QKIS A+ LI P      ERRE   P+ KSVQ        Q  Q+ G
Sbjct: 67  DSSLTDHSSTPLEQKISLALSLIAPHH----ERREFVVPVVKSVQHHHHQQQQQPSQDPG 126

Query: 123 DGELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRREL 182
            GELRRCNW+T  SDK YVSFHDE WGVPVYDDN+LFELLALSGMLMDYNWTEI+KR+EL
Sbjct: 127 SGELRRCNWVTKNSDKVYVSFHDEQWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKEL 186

Query: 183 FREAFAGFEASTVANMGEKEIADIASDKAIMLVESR-------------IARDFGSFSNY 242
           +REAF+GF+   VA MG+KEI +I+SDKAIML ESR             I R++GSFS++
Sbjct: 187 YREAFSGFDPEIVAKMGDKEINEISSDKAIMLAESRVRCIVDNAKCILKIVREYGSFSSF 246

Query: 243 MWSYMNFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDH 300
           MW Y+N+KPTINR++YPRNVPLR+PKAEAIS+D++KRGFRFVGPVIV SFMQAAGLTIDH
Sbjct: 247 MWGYVNYKPTINRYKYPRNVPLRTPKAEAISRDLLKRGFRFVGPVIVCSFMQAAGLTIDH 306

[Close]
BLAST of Cp4.1LG01g13260 vs. TrEMBL
Match: B9HWT9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s14710g PE=4 SV=2)

HSP 1 Score: 425.6 bits (1093), Expect = 4.9e-116
Identity = 223/320 (69.69%), Postives = 259/320 (80.94%), Query Frame = 1 

Query: 4   KATVRRRILERQTCP-KEKDR---TSQNILSKHLKKIYPIGLQRTTSSLSLSSFSLSLSQ 63
           KA VR++ILE+     KEK++    +Q + SKHLK++YPIGL R+TSSLSLSS SLSLSQ
Sbjct: 3   KANVRKQILEKNNILIKEKEKPISNTQGLFSKHLKRVYPIGLHRSTSSLSLSSVSLSLSQ 62

Query: 64  NSNDSSLTDSS-IQLDQKISYAIRLITPPPPPPPERREAPLPKSVQ------QQCQELGD 123
           NSNDSSLTDSS + L+QKIS A+RLI+P      ERRE P+ ++ Q      QQ Q+  D
Sbjct: 63  NSNDSSLTDSSAVPLEQKISLALRLISPL-----ERREVPVARNFQPQQQQQQQNQDSND 122

Query: 124 GELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELF 183
           GE++RCNWIT  SDK YV+FHDECWGVPVYDDN+LFELLALSGMLMDYNWTEI+KR+ELF
Sbjct: 123 GEVKRCNWITKNSDKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELF 182

Query: 184 REAFAGFEASTVANMGEKEIADIASDKAIMLVESR-------------IARDFGSFSNYM 243
           REAF GF+ + VA MGEKEI +IAS+KAIML ESR             IAR+FGSFSNYM
Sbjct: 183 REAFEGFDPNIVAKMGEKEIMEIASNKAIMLAESRVRCIVDNSKCILKIAREFGSFSNYM 242

Query: 244 WSYMNFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHL 300
           W  +NFKPTINR++YPRNVPLRSPKAEAISKD++KRGFRF GPVIVYSFMQAAGLTIDHL
Sbjct: 243 WGNVNFKPTINRYKYPRNVPLRSPKAEAISKDLLKRGFRFAGPVIVYSFMQAAGLTIDHL 302

[Close]
BLAST of Cp4.1LG01g13260 vs. TAIR10
Match: AT1G13635.1 (AT1G13635.1 DNA glycosylase superfamily protein)

HSP 1 Score: 375.6 bits (963), Expect = 2.9e-104
Identity = 197/309 (63.75%), Postives = 238/309 (77.02%), Query Frame = 1 

Query: 8   RRRILERQTCPKEKD-RTSQNILSKHLKKIYPIGLQRTTSS-LSLSSFSLSLSQNSNDSS 67
           R+ I+E+    +EK+ + + N  +KHLK+IYPI LQR+TSS  SLSS SLSLSQNS DS 
Sbjct: 8   RKEIVEKSKSVREKEIKQNSNFFAKHLKRIYPITLQRSTSSSFSLSSISLSLSQNSTDSV 67

Query: 68  LTDSSIQLDQKISYAIRLITPPPPPPPERREAPLPKSVQQQ-CQELGDG-ELRRCNWITH 127
            TDS+  L+QKIS A+ LI+ P      RRE  +PKS+ QQ CQ+     E +RCNWIT 
Sbjct: 68  STDSNSTLEQKISLALGLISSP-----HRREIFVPKSIPQQLCQDFNSSDEPKRCNWITK 127

Query: 128 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAST 187
            SD+ YV FHD+ WGVPVYDDN LFE LA+SGMLMDYNWTEI+KR+E FREAF  F+ + 
Sbjct: 128 KSDEVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRKEHFREAFCEFDPNR 187

Query: 188 VANMGEKEIADIASDKAIMLVESRI-------------ARDFGSFSNYMWSYMNFKPTIN 247
           VA MGEKEIA+IAS+KAIML ESR+               +FGSFS+++W +M++KP IN
Sbjct: 188 VAKMGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVNEFGSFSSFVWGFMDYKPIIN 247

Query: 248 RFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVN 300
           +F+Y RNVPLRSPKAE ISKDM+KRGFRFVGPVIV+SFMQAAGLTIDHLVDCFRHG+CV+
Sbjct: 248 KFKYSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQAAGLTIDHLVDCFRHGDCVS 307

[Close]
BLAST of Cp4.1LG01g13260 vs. TAIR10
Match: AT1G80850.1 (AT1G80850.1 DNA glycosylase superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 2.9e-51
Identity = 92/191 (48.17%), Postives = 130/191 (68.06%), Query Frame = 1 

Query: 116 RRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREA 175
           +RC WIT  SD+ Y++FHDE WGVPV+DD RLFELL+LSG L + +W +I+ +R+LFRE 
Sbjct: 134 KRCAWITPKSDQCYIAFHDEEWGVPVHDDKRLFELLSLSGALAELSWKDILSKRQLFREV 193

Query: 176 FAGFEASTVANMGEKEIAD--------IASDKAIMLVES-----RIARDFGSFSNYMWSY 235
           F  F+   ++ +  K+I          ++  K   ++E+     +I   FGSF  Y+W++
Sbjct: 194 FMDFDPIAISELTNKKITSPEIAATTLLSEQKLRSILENANQVCKIIGAFGSFDKYIWNF 253

Query: 236 MNFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDC 294
           +N KPT ++FRYPR VP+++ KAE ISKD+V+RGFR V P ++YSFMQ AGLT DHL  C
Sbjct: 254 VNQKPTQSQFRYPRQVPVKTSKAELISKDLVRRGFRSVSPTVIYSFMQTAGLTNDHLTCC 313

[Close]
BLAST of Cp4.1LG01g13260 vs. TAIR10
Match: AT5G44680.1 (AT5G44680.1 DNA glycosylase superfamily protein)

HSP 1 Score: 199.1 bits (505), Expect = 3.8e-51
Identity = 92/188 (48.94%), Postives = 129/188 (68.62%), Query Frame = 1 

Query: 116 RRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREA 175
           +RC++IT +SD  YV++HD+ WGVPV+DDN LFELL L+G  +  +WT ++KRR  FREA
Sbjct: 164 KRCSFITTSSDPIYVAYHDKEWGVPVHDDNLLFELLVLTGAQVGSDWTSVLKRRNTFREA 223

Query: 176 FAGFEASTVANMGEKEIADIASDKAIMLVES-----------RIARDFGSFSNYMWSYMN 235
           F+GFEA  VA+  EK+I  I +D  I L +            ++ RD GSF+ Y+W +M 
Sbjct: 224 FSGFEAELVADFNEKKIQSIVNDYGINLSQVLAVVDNAKQILKVKRDLGSFNKYIWGFMK 283

Query: 236 FKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFR 293
            KP   ++   + +P+++ K+E ISKDMV+RGFRFVGP +++S MQAAGLT DHL+ C R
Sbjct: 284 HKPVTTKYTSCQKIPVKTSKSETISKDMVRRGFRFVGPTVIHSLMQAAGLTNDHLITCPR 343

[Close]
BLAST of Cp4.1LG01g13260 vs. TAIR10
Match: AT5G57970.1 (AT5G57970.1 DNA glycosylase superfamily protein)

HSP 1 Score: 193.0 bits (489), Expect = 2.7e-49
Identity = 110/267 (41.20%), Postives = 151/267 (56.55%), Query Frame = 1 

Query: 42  QRTTSSLSLS-SFSLSLSQNSNDSSLTDSSIQLDQKISYAIRLITPPPPPPPERREAPLP 101
           Q   S+LSL+ SFS   S +S  S    S+ +L +  S   R  + P  P     E  L 
Sbjct: 87  QNLNSNLSLNASFSSDASMDSFHSRA--STGRLIRSYSVGSRSKSYPSKPRSVVSEGALD 146

Query: 102 KSVQQQCQELGDGELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDY 161
                     G    +RC W+T  SD  Y+ FHDE WGVPV+DD RLFELL LSG L ++
Sbjct: 147 SPPN------GSETKKRCTWVTPNSDPCYIVFHDEEWGVPVHDDKRLFELLVLSGALAEH 206

Query: 162 NWTEIVKRRELFREAFAGFEASTVANMGEKEIADIASDKAIMLVESR------------- 221
            W  I+ +R+ FRE FA F+ + +  + EK+I    S  + +L + +             
Sbjct: 207 TWPTILSKRQAFREVFADFDPNAIVKINEKKIIGPGSPASTLLSDLKLRAVIENARQILK 266

Query: 222 IARDFGSFSNYMWSYMNFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYS 281
           +  ++GSF  Y+WS++  K  +++FRY R VP ++PKAE ISKD+V+RGFR VGP +VYS
Sbjct: 267 VIEEYGSFDKYIWSFVKNKAIVSKFRYQRQVPAKTPKAEVISKDLVRRGFRSVGPTVVYS 326

Query: 282 FMQAAGLTIDHLVDCFRHGECVNLAER 295
           FMQAAG+T DHL  CFR   C+   ER
Sbjct: 327 FMQAAGITNDHLTSCFRFHHCIFEHER 345

[Close]
BLAST of Cp4.1LG01g13260 vs. TAIR10
Match: AT1G75090.1 (AT1G75090.1 DNA glycosylase superfamily protein)

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-48
Identity = 104/258 (40.31%), Postives = 153/258 (59.30%), Query Frame = 1 

Query: 51  SSFSLSLSQNSNDSSLTDSSIQLDQKISYAIRLITPPPPPPPERREAPLPK-SVQQQCQE 110
           S+FS+S   +S+ SS ++ S       + + ++ TP      E+    +   +V +    
Sbjct: 56  SNFSVSTDDSSSSSSSSERS---SVNTTNSGKVTTPSKRNGVEKLNNVVASVAVVEDISP 115

Query: 111 LGDGELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRR 170
              G ++RC+WIT  SD  YV FHDE WGVPV DD +LFELL  S  L +++W  I++RR
Sbjct: 116 KIPGPVKRCHWITPNSDPIYVLFHDEEWGVPVRDDKKLFELLVFSQALAEFSWPSILRRR 175

Query: 171 ELFREAFAGFEASTVANMGEKEIADIASDKAIMLVESR-------------IARDFGSFS 230
           + FR+ F  F+ S +A   EK +  +  +  ++L E +             + ++FGSFS
Sbjct: 176 DDFRKLFEEFDPSAIAQFTEKRLMSLRVNGCLILSEQKLRAIVENAKSVLKVKQEFGSFS 235

Query: 231 NYMWSYMNFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTI 290
           NY W ++N KP  N +RY R VP++SPKAE ISKDM++RGFR VGP ++YSF+QA+G+  
Sbjct: 236 NYCWRFVNHKPLRNGYRYGRQVPVKSPKAEYISKDMMQRGFRCVGPTVMYSFLQASGIVN 295

Query: 291 DHLVDCFRHGECVNLAER 295
           DHL  CFR+ EC    ER
Sbjct: 296 DHLTACFRYQECNVETER 310

[Close]
BLAST of Cp4.1LG01g13260 vs. NCBI nr
Match: gi|449435284|ref|XP_004135425.1| (PREDICTED: uncharacterized protein LOC101218195 [Cucumis sativus])

HSP 1 Score: 552.7 bits (1423), Expect = 3.8e-154
Identity = 281/312 (90.06%), Postives = 286/312 (91.67%), Query Frame = 1 

Query: 1   MSSKATVRRRILERQTCPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSFSLSLSQN 60
           MSSKATVRR ILERQ CPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSS SLSLSQN
Sbjct: 1   MSSKATVRRHILERQACPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSMSLSLSQN 60

Query: 61  SNDSSLTDSSIQLDQKISYAIRLITPPPPPPPERREAPLPKSVQQQCQELGDGELRRCNW 120
           SNDSSLTDSSIQLDQKISYAIRLITPPP    ERRE PLPKS+QQQ QEL DGELRRCNW
Sbjct: 61  SNDSSLTDSSIQLDQKISYAIRLITPPP----ERREVPLPKSIQQQSQELSDGELRRCNW 120

Query: 121 ITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFE 180
           ITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFE
Sbjct: 121 ITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFE 180

Query: 181 ASTVANMGEKEIADIASDKAIMLVESR-------------IARDFGSFSNYMWSYMNFKP 240
            S VANMGEKEI D+ASDKAIMLVESR             IARDFGSFSNYMWSY+NFKP
Sbjct: 181 PSVVANMGEKEITDVASDKAIMLVESRVRCIVDNAKCILKIARDFGSFSNYMWSYVNFKP 240

Query: 241 TINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGE 300
           TINRFR+PRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHL+DCFRHGE
Sbjct: 241 TINRFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLIDCFRHGE 300

[Close]
BLAST of Cp4.1LG01g13260 vs. NCBI nr
Match: gi|659091306|ref|XP_008446481.1| (PREDICTED: uncharacterized protein LOC103489204 [Cucumis melo])

HSP 1 Score: 549.3 bits (1414), Expect = 4.2e-153
Identity = 281/312 (90.06%), Postives = 285/312 (91.35%), Query Frame = 1 

Query: 1   MSSKATVRRRILERQTCPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSFSLSLSQN 60
           MSSKATVRR ILERQ CPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSS SLSLSQN
Sbjct: 63  MSSKATVRRHILERQACPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 122

Query: 61  SNDSSLTDSSIQLDQKISYAIRLITPPPPPPPERREAPLPKSVQQQCQELGDGELRRCNW 120
           SNDSSLTDSSIQLDQKISYAIRLITPPP    ERRE PLPKS+QQQ QEL DGELRRCNW
Sbjct: 123 SNDSSLTDSSIQLDQKISYAIRLITPPP----ERREVPLPKSIQQQSQELSDGELRRCNW 182

Query: 121 ITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFE 180
           ITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFE
Sbjct: 183 ITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFE 242

Query: 181 ASTVANMGEKEIADIASDKAIMLVESR-------------IARDFGSFSNYMWSYMNFKP 240
            S VANMGEKEI DIASDKAIMLVESR             IARDFGSFSNYMWS +NFKP
Sbjct: 243 PSIVANMGEKEITDIASDKAIMLVESRVRCIVDNAKCILKIARDFGSFSNYMWSSVNFKP 302

Query: 241 TINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGE 300
           TINRFR+PRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHL+DCFRHGE
Sbjct: 303 TINRFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLIDCFRHGE 362

[Close]
BLAST of Cp4.1LG01g13260 vs. NCBI nr
Match: gi|703081259|ref|XP_010091642.1| (Putative Glutamine amidotransferase [Morus notabilis])

HSP 1 Score: 435.3 bits (1118), Expect = 8.9e-119
Identity = 219/301 (72.76%), Postives = 253/301 (84.05%), Query Frame = 1 

Query: 4   KATVRRRILERQTCPKE---KDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSFSLSLSQN 63
           KA VRR +LER    KE   KD+TS  +LSKHLK+IYPIGLQ++ SS SLSS SLSLS+N
Sbjct: 3   KANVRRPVLERNGSLKENEKKDKTSPGLLSKHLKRIYPIGLQKSNSSPSLSSLSLSLSEN 62

Query: 64  SNDSSLTDSSIQLDQKISYAIRLITPPPPPPPERREAPLPKSVQQQCQELGDG--ELRRC 123
           SNDSSL D    LD KIS A+RL+ PP      R+E+P PK+VQQQ  +  +   ELRRC
Sbjct: 63  SNDSSLADFGSPLDHKISLALRLVAPP-----RRKESPAPKNVQQQQSQDANNPEELRRC 122

Query: 124 NWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAG 183
           NWIT  SDK YV+FHDECWGVPVYDDN+LFELLA+SGMLMDYNWTEI+KRRELFREAF+G
Sbjct: 123 NWITKNSDKVYVAFHDECWGVPVYDDNQLFELLAMSGMLMDYNWTEILKRRELFREAFSG 182

Query: 184 FEASTVANMGEKEIADIASDKAIMLVESRIARDFGSFSNYMWSYMNFKPTINRFRYPRNV 243
           F+ S VA MGEKEI +I+S+KAIML ESR+ R+FGSFSNYMWSY++ KP INR+RYPRNV
Sbjct: 183 FDPSKVAKMGEKEITEISSNKAIMLAESRVVREFGSFSNYMWSYVDHKPVINRYRYPRNV 242

Query: 244 PLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVNLAERPWRH 300
           PLRSPKAEAISKD++KRGFRFVGPVIV+SFMQAAGLTIDHLV+C+RH ECV+LAERPWRH
Sbjct: 243 PLRSPKAEAISKDLLKRGFRFVGPVIVHSFMQAAGLTIDHLVNCYRHYECVSLAERPWRH 298

[Close]
BLAST of Cp4.1LG01g13260 vs. NCBI nr
Match: gi|255547045|ref|XP_002514580.1| (PREDICTED: DNA-3-methyladenine glycosylase [Ricinus communis])

HSP 1 Score: 429.9 bits (1104), Expect = 3.7e-117
Identity = 227/323 (70.28%), Postives = 265/323 (82.04%), Query Frame = 1 

Query: 3   SKATVRRRILERQTC-PKEKDRTSQNIL---SKHLKKIYPIGLQRTTSSLSLSSFSLSLS 62
           SKATVR+++LE+++    EK+RT+ N L   SK+LKK+YPIGL R+ SSLSLSS SLSLS
Sbjct: 2   SKATVRKQVLEKKSIFTNEKERTTSNQLGFFSKNLKKVYPIGLHRSNSSLSLSSVSLSLS 61

Query: 63  QNSNDSSLTD-SSIQLDQKISYAIRLITPPPPPPPERREAP-LPKSVQQQ-------CQE 122
           +NSNDSSLTD S+  LDQKIS A+RLITP      ERRE P L ++VQQQ        QE
Sbjct: 62  ENSNDSSLTDYSNTPLDQKISLALRLITPL-----ERREVPALSRNVQQQQQQQQQQSQE 121

Query: 123 LGDGELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRR 182
              GE+RRCNWIT  SDK YV+FHDECWGVPVYDDN+LFELLALSGMLMDYNWTEI+KR+
Sbjct: 122 SNGGEIRRCNWITKNSDKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRK 181

Query: 183 ELFREAFAGFEASTVANMGEKEIADIASDKAIMLVESR-------------IARDFGSFS 242
           +LFREAFAGF+ + VANMGEKEI DIAS+KAIML +SR             IAR+FGSFS
Sbjct: 182 QLFREAFAGFDPNIVANMGEKEILDIASNKAIMLADSRVRCIVDNAKCIAKIAREFGSFS 241

Query: 243 NYMWSYMNFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTI 300
           ++MW ++N+KPTIN+++YPRNVPLR+PKAEAISKD++KRGFRFVGPVIVYSFMQAAGLTI
Sbjct: 242 SFMWGHVNYKPTINKYKYPRNVPLRTPKAEAISKDLLKRGFRFVGPVIVYSFMQAAGLTI 301

[Close]
BLAST of Cp4.1LG01g13260 vs. NCBI nr
Match: gi|590698505|ref|XP_007045734.1| (DNA glycosylase superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 427.2 bits (1097), Expect = 2.4e-116
Identity = 224/321 (69.78%), Postives = 258/321 (80.37%), Query Frame = 1 

Query: 3   SKATVRRRILERQTCPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSFSLSLSQNSN 62
           SKA VRR ILE+   PKEK++ +Q++LSKHLKKIYPIGLQR+TSSLSLSS SLSLSQNSN
Sbjct: 7   SKANVRRHILEKNRSPKEKEKPAQSVLSKHLKKIYPIGLQRSTSSLSLSSLSLSLSQNSN 66

Query: 63  DSSLTD-SSIQLDQKISYAIRLITPPPPPPPERRE--APLPKSVQ--------QQCQELG 122
           DSSLTD SS  L+QKIS A+ LI P      ERRE   P+ KSVQ        Q  Q+ G
Sbjct: 67  DSSLTDHSSTPLEQKISLALSLIAPHH----ERREFVVPVVKSVQHHHHQQQQQPSQDPG 126

Query: 123 DGELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRREL 182
            GELRRCNW+T  SDK YVSFHDE WGVPVYDDN+LFELLALSGMLMDYNWTEI+KR+EL
Sbjct: 127 SGELRRCNWVTKNSDKVYVSFHDEQWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKEL 186

Query: 183 FREAFAGFEASTVANMGEKEIADIASDKAIMLVESR-------------IARDFGSFSNY 242
           +REAF+GF+   VA MG+KEI +I+SDKAIML ESR             I R++GSFS++
Sbjct: 187 YREAFSGFDPEIVAKMGDKEINEISSDKAIMLAESRVRCIVDNAKCILKIVREYGSFSSF 246

Query: 243 MWSYMNFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDH 300
           MW Y+N+KPTINR++YPRNVPLR+PKAEAIS+D++KRGFRFVGPVIV SFMQAAGLTIDH
Sbjct: 247 MWGYVNYKPTINRYKYPRNVPLRTPKAEAISRDLLKRGFRFVGPVIVCSFMQAAGLTIDH 306

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g13260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GUAA_HELHP2.0e-3336.27Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter hepaticus (strain ... [more]
3MG1_ECOLI1.1e-2833.70DNA-3-methyladenine glycosylase 1 OS=Escherichia coli (strain K12) GN=tag PE=1 S... [more]
3MGA_HAEIN3.0e-2633.52DNA-3-methyladenine glycosylase OS=Haemophilus influenzae (strain ATCC 51907 / D... [more]
BLAST of Cp4.1LG01g13260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUC5_CUCSA2.7e-15490.06Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606920 PE=4 SV=1[more]
W9QWE1_9ROSA6.2e-11972.76Putative Glutamine amidotransferase OS=Morus notabilis GN=L484_026493 PE=4 SV=1[more]
B9RLG1_RICCO2.6e-11770.28DNA-3-methyladenine glycosylase, putative OS=Ricinus communis GN=RCOM_1466540 PE... [more]
A0A061E9D7_THECC1.7e-11669.78DNA glycosylase superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_011427 P... [more]
B9HWT9_POPTR4.9e-11669.69Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s14710g PE=4 SV=2[more]
BLAST of Cp4.1LG01g13260 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13635.12.9e-10463.75 DNA glycosylase superfamily protein[more]
AT1G80850.12.9e-5148.17 DNA glycosylase superfamily protein[more]
AT5G44680.13.8e-5148.94 DNA glycosylase superfamily protein[more]
AT5G57970.12.7e-4941.20 DNA glycosylase superfamily protein[more]
AT1G75090.11.7e-4840.31 DNA glycosylase superfamily protein[more]
BLAST of Cp4.1LG01g13260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435284|ref|XP_004135425.1|3.8e-15490.06PREDICTED: uncharacterized protein LOC101218195 [Cucumis sativus][more]
gi|659091306|ref|XP_008446481.1|4.2e-15390.06PREDICTED: uncharacterized protein LOC103489204 [Cucumis melo][more]
gi|703081259|ref|XP_010091642.1|8.9e-11972.76Putative Glutamine amidotransferase [Morus notabilis][more]
gi|255547045|ref|XP_002514580.1|3.7e-11770.28PREDICTED: DNA-3-methyladenine glycosylase [Ricinus communis][more]
gi|590698505|ref|XP_007045734.1|2.4e-11669.78DNA glycosylase superfamily protein isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006284base-excision repair
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0008725DNA-3-methyladenine glycosylase activity
Vocabulary: INTERPRO
TermDefinition
IPR011257DNA_glycosylase
IPR005019Adenine_glyco
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006284 base-excision repair
biological_process GO:0006541 glutamine metabolic process
biological_process GO:0006281 DNA repair
cellular_component GO:0005575 cellular_component
molecular_function GO:0008725 DNA-3-methyladenine glycosylase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0003824 catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g13260.1Cp4.1LG01g13260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005019Methyladenine glycosylasePFAMPF03352Adenine_glycocoord: 124..285
score: 2.4
IPR011257DNA glycosylaseGENE3DG3DSA:1.10.340.30coord: 116..285
score: 3.4
IPR011257DNA glycosylaseunknownSSF48150DNA-glycosylasecoord: 116..289
score: 7.46
NoneNo IPR availablePANTHERPTHR31116FAMILY NOT NAMEDcoord: 1..299
score: 1.5E
NoneNo IPR availablePANTHERPTHR31116:SF23-METHYLADENINE GLYCOSYLASE I-RELATEDcoord: 1..299
score: 1.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g13260Cucsa.284320Cucumber (Gy14) v1cgycpeB0750
Cp4.1LG01g13260CmaCh04G015740Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g13260CmoCh04G016460Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g13260Cla020322Watermelon (97103) v1cpewmB427
Cp4.1LG01g13260Csa5G606920Cucumber (Chinese Long) v2cpecuB442
Cp4.1LG01g13260MELO3C012172Melon (DHL92) v3.5.1cpemeB363
Cp4.1LG01g13260ClCG05G023500Watermelon (Charleston Gray)cpewcgB388
Cp4.1LG01g13260CSPI05G24530Wild cucumber (PI 183967)cpecpiB442
Cp4.1LG01g13260Lsi04G003420Bottle gourd (USVL1VR-Ls)cpelsiB352
Cp4.1LG01g13260MELO3C012172.2Melon (DHL92) v3.6.1cpemedB423
Cp4.1LG01g13260CsaV3_5G033540Cucumber (Chinese Long) v3cpecucB0546
Cp4.1LG01g13260Bhi07G001199Wax gourdcpewgoB0557
Cp4.1LG01g13260CsGy5G024020Cucumber (Gy14) v2cgybcpeB648
Cp4.1LG01g13260Carg01776Silver-seed gourdcarcpeB1177
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g13260Cucurbita pepo (Zucchini)cpecpeB040
Cp4.1LG01g13260Cucurbita pepo (Zucchini)cpecpeB348
Cp4.1LG01g13260Cucurbita pepo (Zucchini)cpecpeB399
Cp4.1LG01g13260Cucurbita maxima (Rimu)cmacpeB429
Cp4.1LG01g13260Cucurbita moschata (Rifu)cmocpeB115
Cp4.1LG01g13260Cucurbita moschata (Rifu)cmocpeB392
Cp4.1LG01g13260Wild cucumber (PI 183967)cpecpiB381
Cp4.1LG01g13260Cucumber (Chinese Long) v2cpecuB381
Cp4.1LG01g13260Bottle gourd (USVL1VR-Ls)cpelsiB371
Cp4.1LG01g13260Watermelon (Charleston Gray)cpewcgB401
Cp4.1LG01g13260Watermelon (97103) v1cpewmB470
Cp4.1LG01g13260Melon (DHL92) v3.5.1cpemeB395
Cp4.1LG01g13260Cucumber (Gy14) v2cgybcpeB063
Cp4.1LG01g13260Cucumber (Gy14) v2cgybcpeB626
Cp4.1LG01g13260Melon (DHL92) v3.6.1cpemedB437
Cp4.1LG01g13260Melon (DHL92) v3.6.1cpemedB458
Cp4.1LG01g13260Cucumber (Chinese Long) v3cpecucB0474
Cp4.1LG01g13260Cucumber (Chinese Long) v3cpecucB0518
Cp4.1LG01g13260Wax gourdcpewgoB0562