Lsi03G022220 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi03G022220
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionSelT-like protein
Locationchr03 : 33241558 .. 33244533 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGGCCTAGGCCCATCCGACCCATTGCATGACTCGTGCACGTGCAGTTGGACTGGGTATATATACCGTAGTAGTTGGGAGTTAGGGACAAAGCCCGGCTGAGTTATTTTTTGAGGACAATTTTACCCTTCAATTGGCTTCATATTTTCGTTTGTAAGTTTTCCTTTTTCACCTCCCAAAATATTTCTCACCTTCTTTTCTGTTGGACTTCGAATCTCTGATTCTCGCGAGCGTTGGCGTCGTTGATTCCGATGGATCGAACTCAGATAGTTCTGTTAGGGCTGCCGATCTTTTTGCTTTTTACTGATATTGTGAATCTTTTCACTCCTCCGCCTCCGAAACCTGCCAGTCATCCTCCACCTCGAGTTCACTACCAGCCTAAATCTCAACCAGTCATCCAGGAACCGCCTGAATTTCCTACGGAGGTGAATGATTTCGTATTTGATTGGACTGCTCTTGATTTTTGATGTTGTTTTTGTGATATTCAGAAACTTAATTTGTTATTTAGTTTTGGAATACAGAAGCGGAGCGTAATCGGAGGAATTGGCCAGGGCTGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTACAGGTAGTTCATCGTTTTGATTATTAATTTTTGTGTTTGTTTGTCTCATTTTGGGCGGGAAGTGAGTCAATCGAACGTTTATGTGATTTTCGTTTCCTGTGTTTTTTATGTTTTCCTCCATTTCTCATCGACTCTGATTGCGCATTAAATTACGGTAAACTTATAGTGAAGGAAAACTTGATTTATTTGCTTTGTTTTGTTTTAATTCAACAAGCACAGGTTTCTTTGATTGACGTTAACTTCCTTGATTGAACGAACATTTCAATATCTCTCTCTCTCTAATGGTTGTTTAGAGTCACTATGATGAAAATTTGGTTGTAGTCGGAATCTTTGCTGCTGTTCTTCCTCCGATTTTGCTGTTTTTGTTTATTGTTCTTGTTTTCCCCACAGCACAGGACTCTTTTGTTATTTTGAACTTCTTTCGGCAATTGAACAAACGTTTCAATTTCTCTGCTCTCTAGTGATTGTTTTTTTTAAGAGCATTACTCTCCAGTGGCTGTTGAGAGTCATTATGATGAACAATCGGTTGTACTTTGGAATTTTGCTTCTTGTTGTTCCTTTTAACTTCCTCGATTGAACAAACTTTTCGATTTCTCTACTGTCTACTGGTTGCTGAGAGTCAATATGATGAAAAATTAGCCGTACTTTGGAATCTTTACTGTTGGCTTTGATTTTTTTAACCTTGATCAGCATAGTTTTCTTTTATTTACGTAACATCCTCGATTGAATTAATATTTCAATTTCTCCACTCTTTCGTGGTTGTTGAGAGTCATTATAAAAAAAACAGGTTGTAGTCTTCTTCACGGTTGCTGTTCCTTGGAGAATGTGCCTTTTCTTGTTAAAGACTTGAGTCTTGAACGAACATAGTTTGCAGACCTCAATTCAGAAAAGTTCAGTAATAATTCCATATGGAGCCAGCTTCTCTATGTTAGGTTATATGATTTGTTGCAAGATATAGAAATGGATGTTTCATTTGACCTCTTCTGCTTGAGAACGTGATAACATGAACTTATTTATAACATGCGTTAGTATTGCCATTGATAAGCAACTTCTGTAGATTATGTTTTGTACGATTAATTTCATTAAGGTTTAGGAACAGGTTGATGTTAGACTCCCCATTGTTTAGCTTTGGGATAAGGAATGATCTGGATACTGGATGATGAAATTTTGTTGCCACTCATAGAGCTTAAGAATTGAGTAGAAGTCTAATTAGGAATCAGGATAGAGTTTACCTCGTATTTTTTTTCCGTAGTTGTTACACATGATAGTATCAGAAAAGACTTCACTCGTAGTGCATATAAGATATGATATCTTCGTGCATAGGTGATCAGAAGGCAAGGAATGAAGGGGATCAATAGATTAAGCCAATGTTCTTCATGGAGCATATATGATATGATATCTTCCCTTAATTGTATCAAATAAACATCTGACTGCCACTAAGTATAACTGTTGGTTATTATGTGAAGTCTAAGTATAATGTTCAGAAGCAGTGGCATGCATTTTATCCATACATTTTTGGGGTTTGGTCTTTAAAATGTAGTTGTACCATCATGTTATCTCAATTTGTGGAAATGTTTGATGTGAAATGATTTTAAACTCTTGTGGCAGAGGCACTGCAATAACAATGAAAAATATGCTGGAGTCGTCATTTCCTGGAGTTGAAGTTATTTTGGCAAATTACCCCCCACCATTTCCAAAGCGCCTTCTTAGTAAAATAGTACCTGTAGTTCAATTTGGAATTATTGGAACAATAATGGCGGGAGAACATATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTACTATTCCTTGCGTGCAAATAGGTTTGGAAGCATTGCAAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTATATTGCAATGGTGAAATGGTAAGATTCTTTTATATCTTTTTGTTTCCTCCTTTTTTTCTTGGTAAGATCTCTGTTTACTGACTATCCATTTTCTGAAGGTCTTTTCTAAGTTGAAAGAGCAGAGATTTCCTGGCGAGATTGAGTTGAGAGATCTTATTGGAAAGAAACTCTCTGGGCCGAGATTTTTCGACAACTCTGGAGGAGTTTGGTCATAGGTATGTGACTTCTTGTGATCATTGCCATCAAATTAGCAACTGGTGAAGTCTAGTCTAGATAATCTAATCCAAGTTTATCATAGCTAAGGGAGGAGCTTGTCTTTGAGAGATTTTCAATTTTATTGTGTCTATTAGTTATATACTTAACATTACTTACGTACTCCCTACTCCCTACTACCTTTATCTTACGAAATCAAAACTTTTAAGATTTCAAATTCATCCCACACAAAATGAAATTTCTAATTCTTCTGTTGATATCATGCA

mRNA sequence

TGGGCCTAGGCCCATCCGACCCATTGCATGACTCGTGCACGTGCAGTTGGACTGGGTATATATACCGTAGTAGTTGGGAGTTAGGGACAAAGCCCGGCTGAGTTATTTTTTGAGGACAATTTTACCCTTCAATTGGCTTCATATTTTCGTTTGTAAGTTTTCCTTTTTCACCTCCCAAAATATTTCTCACCTTCTTTTCTGTTGGACTTCGAATCTCTGATTCTCGCGAGCGTTGGCGTCGTTGATTCCGATGGATCGAACTCAGATAGTTCTGTTAGGGCTGCCGATCTTTTTGCTTTTTACTGATATTGTGAATCTTTTCACTCCTCCGCCTCCGAAACCTGCCAGTCATCCTCCACCTCGAGTTCACTACCAGCCTAAATCTCAACCAGTCATCCAGGAACCGCCTGAATTTCCTACGGAGAAGCGGAGCGTAATCGGAGGAATTGGCCAGGGCTGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTACAGAGGCACTGCAATAACAATGAAAAATATGCTGGAGTCGTCATTTCCTGGAGTTGAAGTTATTTTGGCAAATTACCCCCCACCATTTCCAAAGCGCCTTCTTAGTAAAATAGTACCTGTAGTTCAATTTGGAATTATTGGAACAATAATGGCGGGAGAACATATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTACTATTCCTTGCGTGCAAATAGGTTTGGAAGCATTGCAAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTATATTGCAATGGTGAAATGGTCTTTTCTAAGTTGAAAGAGCAGAGATTTCCTGGCGAGATTGAGTTGAGAGATCTTATTGGAAAGAAACTCTCTGGGCCGAGATTTTTCGACAACTCTGGAGGAGTTTGGTCATAGGTATGTGACTTCTTGTGATCATTGCCATCAAATTAGCAACTGGTGAAGTCTAGTCTAGATAATCTAATCCAAGTTTATCATAGCTAAGGGAGGAGCTTGTCTTTGAGAGATTTTCAATTTTATTGTGTCTATTAGTTATATACTTAACATTACTTACGTACTCCCTACTCCCTACTACCTTTATCTTACGAAATCAAAACTTTTAAGATTTCAAATTCATCCCACACAAAATGAAATTTCTAATTCTTCTGTTGATATCATGCA

Coding sequence (CDS)

ATGGATCGAACTCAGATAGTTCTGTTAGGGCTGCCGATCTTTTTGCTTTTTACTGATATTGTGAATCTTTTCACTCCTCCGCCTCCGAAACCTGCCAGTCATCCTCCACCTCGAGTTCACTACCAGCCTAAATCTCAACCAGTCATCCAGGAACCGCCTGAATTTCCTACGGAGAAGCGGAGCGTAATCGGAGGAATTGGCCAGGGCTGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTACAGAGGCACTGCAATAACAATGAAAAATATGCTGGAGTCGTCATTTCCTGGAGTTGAAGTTATTTTGGCAAATTACCCCCCACCATTTCCAAAGCGCCTTCTTAGTAAAATAGTACCTGTAGTTCAATTTGGAATTATTGGAACAATAATGGCGGGAGAACATATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTACTATTCCTTGCGTGCAAATAGGTTTGGAAGCATTGCAAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTATATTGCAATGGTGAAATGGTCTTTTCTAAGTTGAAAGAGCAGAGATTTCCTGGCGAGATTGAGTTGAGAGATCTTATTGGAAAGAAACTCTCTGGGCCGAGATTTTTCGACAACTCTGGAGGAGTTTGGTCATAG

Protein sequence

MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPASHPPPRVHYQPKSQPVIQEPPEFPTEKRSVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIVPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS
BLAST of Lsi03G022220 vs. Swiss-Prot
Match: SELT_ARATH (SelT-like protein OS=Arabidopsis thaliana GN=At3g47300 PE=2 SV=2)

HSP 1 Score: 281.6 bits (719), Expect = 7.7e-75
Identity = 139/216 (64.35%), Postives = 169/216 (78.24%), Query Frame = 1

Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPASHPPPRVHYQPKSQPVIQEPPEFPTEKR 60
           MD+TQ++LLGLPIFLL +D+ NLFTPPPPK           Q +S P I E  +FP +K 
Sbjct: 1   MDKTQLILLGLPIFLLCSDLFNLFTPPPPKS----------QHQSPPSISETLDFPAQKS 60

Query: 61  SVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIV 120
           +   G+G G  + INFC+SCSY+GTA++MK MLES FPG++V+LANYP P PKR+L+K+V
Sbjct: 61  T---GVGYGNTVEINFCISCSYKGTAVSMKKMLESVFPGLDVVLANYPAPAPKRILAKVV 120

Query: 121 PVVQFGIIGTIMAGEHIFPRLGMA-PPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           PV Q G+IG IM GE IFP +G+A PP WY+SLRANRFGS+ASTWL GNF+QSFLQSSGA
Sbjct: 121 PVAQVGVIGLIMGGEQIFPMIGIAQPPAWYHSLRANRFGSMASTWLLGNFLQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGP 216
           FEV CNGE+VFSKLKE RFPGEIELRDLI   ++ P
Sbjct: 181 FEVSCNGELVFSKLKEGRFPGEIELRDLISGTMTKP 203

BLAST of Lsi03G022220 vs. Swiss-Prot
Match: HSP6_HETGL (Putative esophageal gland cell secretory protein 6 OS=Heterodera glycines GN=HSP6 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.2e-20
Identity = 46/142 (32.39%), Postives = 79/142 (55.63%), Query Frame = 1

Query: 72  ININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIVPVVQFGIIGTI 131
           +  +FCVSC YR        +L   +PG+++   NYPP   + + ++++ +V+  +I  +
Sbjct: 83  VKFSFCVSCGYRQAYEQFAQILREKYPGIDIHGENYPPGILRTVGAQVIGMVKIALIVCV 142

Query: 132 MAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFS 191
           ++G   FP LG+  P ++  + +NR  +    +LF N I+  LQS+GAFE+Y   E ++S
Sbjct: 143 VSGRSPFPTLGLETPTFFQWMLSNRLSAALMLFLFSNAIEGMLQSTGAFEIYIESERIWS 202

Query: 192 KLKEQRFPGEIELRDLIGKKLS 214
           KL+  R P   EL   I   L+
Sbjct: 203 KLESGRVPSPPELFQAIDSHLA 224

BLAST of Lsi03G022220 vs. Swiss-Prot
Match: SELT_DROME (SelT-like protein OS=Drosophila melanogaster GN=CG3887 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14
Identity = 49/157 (31.21%), Postives = 77/157 (49.04%), Query Frame = 1

Query: 58  EKRSVIGGIGQGCVININF--CVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRL 117
           EK   +   GQ     + F  C SC YR        +L   +P ++V   NY PP     
Sbjct: 28  EKEIPVTKFGQNIAPTMTFLYCYSCGYRKAFEDYVGLLGEKYPQIQVNGGNYDPPGLNYY 87

Query: 118 LSKIVPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQ 177
           LSK++  ++  II ++++    F  LG+  P W+  ++AN+  +    +  GN +++ L 
Sbjct: 88  LSKMIFALKIIIIVSVVSAVSPFTFLGLNTPSWWSHMQANKIYACMMIFFLGNMLEAQLI 147

Query: 178 SSGAFEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKL 213
           SSGAFE+  N   V+SKL+  RFP    L  +I   L
Sbjct: 148 SSGAFEITLNDVPVWSKLQTGRFPSPEVLFQIIDNHL 184

BLAST of Lsi03G022220 vs. Swiss-Prot
Match: SELT1_CAEEL (Putative selT-like protein C35C5.3 OS=Caenorhabditis elegans GN=C35C5.3 PE=3 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-13
Identity = 38/142 (26.76%), Postives = 69/142 (48.59%), Query Frame = 1

Query: 72  ININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIVPVVQFGIIGTI 131
           + I +CVSC Y+          +  +P + +  AN+ P   K  +++ +  V+  ++  +
Sbjct: 87  LRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVLV 146

Query: 132 MAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFS 191
           + G + F R G+  P        N+  S    ++ GN ++  L S+GAFEVY   E ++S
Sbjct: 147 LGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIWS 206

Query: 192 KLKEQRFPGEIELRDLIGKKLS 214
           K++  R P   E   LI  +L+
Sbjct: 207 KIESGRVPSPQEFMQLIDAQLA 228

BLAST of Lsi03G022220 vs. TrEMBL
Match: A0A0A0LCS3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G731110 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 3.6e-119
Identity = 213/227 (93.83%), Postives = 217/227 (95.59%), Query Frame = 1

Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPAS-HPPPRVHYQPKSQPVIQEPPEFPTEK 60
           MDRTQ+VLLGLPI LLFTDIVNLFTPPPPKPA+ HPPPRVHYQPKSQPVIQEPPEFPTEK
Sbjct: 1   MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 60

Query: 61  RSVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKI 120
           RSVIGGIGQG VININFCVSCSYR TAITMKNMLESSFPGVEVILANYPPP PKRLLSK+
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 120

Query: 121 VPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           VP VQFGIIG IMAGEHIFPRLGM PPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA
Sbjct: 121 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS 227
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIG+KLSG RF DNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS 227

BLAST of Lsi03G022220 vs. TrEMBL
Match: E5GBE6_CUCME (Selenoprotein t OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 1.4e-118
Identity = 212/227 (93.39%), Postives = 218/227 (96.04%), Query Frame = 1

Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPAS-HPPPRVHYQPKSQPVIQEPPEFPTEK 60
           MDRT+IVLLGLPIFLLFTDIVNLFTPPPPKPA+ HPPPRVHYQPKSQ VIQEP EFPTEK
Sbjct: 1   MDRTRIVLLGLPIFLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQSVIQEPLEFPTEK 60

Query: 61  RSVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKI 120
           RSVIGGIGQG VININFCVSCSYRGTAI MKNMLESSFPGVEVILANYPPPFPKRLLSK+
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRGTAINMKNMLESSFPGVEVILANYPPPFPKRLLSKV 120

Query: 121 VPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           VPVVQFGIIG I+AGEHIFPRLGM PPPWYYSLRANRFGSIASTWLFGNF+QSFLQSSGA
Sbjct: 121 VPVVQFGIIGIIVAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFVQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS 227
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIG+KLSG RF DNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVDNSGGVWS 227

BLAST of Lsi03G022220 vs. TrEMBL
Match: A5BN73_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024323 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.9e-89
Identity = 162/229 (70.74%), Postives = 190/229 (82.97%), Query Frame = 1

Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPASHPPPRVHYQPKSQPVIQEPP-EFPTEK 60
           MDR Q++L+GLP+FL F+DI+NLFTPPPPKP  H     H+  + QP  Q  P +FPT+K
Sbjct: 1   MDRAQLLLVGLPLFLFFSDIINLFTPPPPKPPPHHHHHHHHHQQPQPKPQSAPLDFPTQK 60

Query: 61  RSVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKI 120
            S IGGIG G  +NINFC SCSYRG A+TMKNMLES FPGV V+LANYPPP PKRLLSK+
Sbjct: 61  ESGIGGIGFGNTVNINFCSSCSYRGNAVTMKNMLESQFPGVTVVLANYPPPLPKRLLSKV 120

Query: 121 VPVVQFGIIGTIMAGEHIFPRLG-MAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSG 180
           VPVVQ G+IG +MAGE IFPRLG +APPPWYYSLRANRFG+I++TWL GNF+QSFLQSSG
Sbjct: 121 VPVVQIGVIGIVMAGEQIFPRLGFIAPPPWYYSLRANRFGTISTTWLLGNFLQSFLQSSG 180

Query: 181 AFEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSG-GVWS 227
           AFEVYCNGE+VFSKLK+QRFPGEIEL+DL+G++L   R  D+ G GVWS
Sbjct: 181 AFEVYCNGELVFSKLKQQRFPGEIELKDLVGQRLVASRIVDDVGAGVWS 229

BLAST of Lsi03G022220 vs. TrEMBL
Match: D7SY21_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0105g00440 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 6.6e-89
Identity = 163/228 (71.49%), Postives = 191/228 (83.77%), Query Frame = 1

Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPASHPPPRVHYQPKSQPVIQEPPEFPTEKR 60
           MDR Q++L+GLP+FL F+DI+NLFTPPPPKP   PP   H QP+ +P    P +FPT+K 
Sbjct: 1   MDRAQLLLVGLPLFLFFSDIINLFTPPPPKP---PPHHHHQQPQPKPQ-SAPLDFPTQKE 60

Query: 61  SVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIV 120
           S IGGIG G  +NINFC SCSYRG A+TMKNMLES FPGV V+LANYPPP PKRLLSK+V
Sbjct: 61  SGIGGIGFGNTVNINFCSSCSYRGNAVTMKNMLESQFPGVTVVLANYPPPLPKRLLSKVV 120

Query: 121 PVVQFGIIGTIMAGEHIFPRLG-MAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           PVVQ G+IG +MAGE IFPRLG +APPPWYYSLRANRFG+I++TWL GNF+QSFLQSSGA
Sbjct: 121 PVVQIGVIGIVMAGEQIFPRLGFIAPPPWYYSLRANRFGTISTTWLLGNFLQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSG-GVWS 227
           FEVYCNGE+VFSKLK+QRFPGEIEL+DL+G++L   R  D+ G GVWS
Sbjct: 181 FEVYCNGELVFSKLKQQRFPGEIELKDLVGQRLVASRIVDDVGAGVWS 224

BLAST of Lsi03G022220 vs. TrEMBL
Match: M5W272_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015809mg PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.0e-85
Identity = 162/237 (68.35%), Postives = 189/237 (79.75%), Query Frame = 1

Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPASH--------PPPRVHYQPKSQPVIQEP 60
           MDR Q+VL+GLPIFL  TDI +LFTP PPK ++H        P P  H  P+ Q ++QEP
Sbjct: 1   MDRAQLVLVGLPIFLFCTDIFSLFTPKPPKTSTHYHVHDDEDPQPLDHPDPQHQQLLQEP 60

Query: 61  PEFPTEKRS-VIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPF 120
            +FPT+++S VIG IG G  INI FC SCSYRG+A+TMKNML ++FPG+ VILAN+PPP 
Sbjct: 61  LKFPTQQKSDVIGAIGMGSTINIGFCTSCSYRGSAVTMKNMLGTAFPGINVILANHPPPL 120

Query: 121 PKRLLSKIVPVVQFGIIGTIMAGEHIFPRLGM-APPPWYYSLRANRFGSIASTWLFGNFI 180
           P+RLLSK+VPV Q GIIGTIMAGEHIF RLG+  PPPWY+SL+ANRFGSIASTW+ GNFI
Sbjct: 121 PRRLLSKLVPVFQVGIIGTIMAGEHIFSRLGITTPPPWYHSLKANRFGSIASTWILGNFI 180

Query: 181 QSFLQSSGAFEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDN-SGGVWS 227
           QSFLQS+GAFEVYCNGE+VFSKLKEQRFP EIELRDL+GKKL   R  D   GG WS
Sbjct: 181 QSFLQSTGAFEVYCNGELVFSKLKEQRFPSEIELRDLVGKKLGSSRTADGPGGGAWS 237

BLAST of Lsi03G022220 vs. TAIR10
Match: AT5G58640.1 (AT5G58640.1 Selenoprotein, Rdx type)

HSP 1 Score: 298.9 bits (764), Expect = 2.6e-81
Identity = 146/226 (64.60%), Postives = 179/226 (79.20%), Query Frame = 1

Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPASH---PPPRVHYQPKSQPVIQEPPEFPT 60
           MDR Q++LLGLPIFL  +D+ NLFTPPPPKP  H    PP + +Q +   +I E  +FP+
Sbjct: 1   MDRAQLILLGLPIFLFCSDLFNLFTPPPPKPQPHRPHQPPHIPHQHRPNAIIPETLDFPS 60

Query: 61  EKRSVIGG-IGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLL 120
           +K S +GG IG G  + INFCVSCSY+GTA+TMK MLE++FPG++VILANYPPP PKRLL
Sbjct: 61  QKTSGLGGAIGYGNTVEINFCVSCSYKGTAVTMKKMLETAFPGLDVILANYPPPAPKRLL 120

Query: 121 SKIVPVVQFGIIGTIMAGEHIFPRLGMA-PPPWYYSLRANRFGSIASTWLFGNFIQSFLQ 180
           +K+VPVVQ G+IG I+AG+ I P +G+  PP W++SLRANRFGS+ASTWL GNF+QS+LQ
Sbjct: 121 AKVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIGNFLQSYLQ 180

Query: 181 SSGAFEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNS 222
           SSGAFEV+CNGE VFSKLKE RFPGEIELRDLI K L+ P     S
Sbjct: 181 SSGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISKTLTRPSILTGS 226

BLAST of Lsi03G022220 vs. TAIR10
Match: AT3G47300.1 (AT3G47300.1 SELT-like protein precursor)

HSP 1 Score: 281.6 bits (719), Expect = 4.4e-76
Identity = 139/216 (64.35%), Postives = 169/216 (78.24%), Query Frame = 1

Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPASHPPPRVHYQPKSQPVIQEPPEFPTEKR 60
           MD+TQ++LLGLPIFLL +D+ NLFTPPPPK           Q +S P I E  +FP +K 
Sbjct: 1   MDKTQLILLGLPIFLLCSDLFNLFTPPPPKS----------QHQSPPSISETLDFPAQKS 60

Query: 61  SVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIV 120
           +   G+G G  + INFC+SCSY+GTA++MK MLES FPG++V+LANYP P PKR+L+K+V
Sbjct: 61  T---GVGYGNTVEINFCISCSYKGTAVSMKKMLESVFPGLDVVLANYPAPAPKRILAKVV 120

Query: 121 PVVQFGIIGTIMAGEHIFPRLGMA-PPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           PV Q G+IG IM GE IFP +G+A PP WY+SLRANRFGS+ASTWL GNF+QSFLQSSGA
Sbjct: 121 PVAQVGVIGLIMGGEQIFPMIGIAQPPAWYHSLRANRFGSMASTWLLGNFLQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGP 216
           FEV CNGE+VFSKLKE RFPGEIELRDLI   ++ P
Sbjct: 181 FEVSCNGELVFSKLKEGRFPGEIELRDLISGTMTKP 203

BLAST of Lsi03G022220 vs. NCBI nr
Match: gi|449439880|ref|XP_004137713.1| (PREDICTED: selT-like protein [Cucumis sativus])

HSP 1 Score: 435.6 bits (1119), Expect = 5.1e-119
Identity = 213/227 (93.83%), Postives = 217/227 (95.59%), Query Frame = 1

Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPAS-HPPPRVHYQPKSQPVIQEPPEFPTEK 60
           MDRTQ+VLLGLPI LLFTDIVNLFTPPPPKPA+ HPPPRVHYQPKSQPVIQEPPEFPTEK
Sbjct: 1   MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTEK 60

Query: 61  RSVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKI 120
           RSVIGGIGQG VININFCVSCSYR TAITMKNMLESSFPGVEVILANYPPP PKRLLSK+
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSKV 120

Query: 121 VPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           VP VQFGIIG IMAGEHIFPRLGM PPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA
Sbjct: 121 VPAVQFGIIGIIMAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS 227
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIG+KLSG RF DNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDNSGGVWS 227

BLAST of Lsi03G022220 vs. NCBI nr
Match: gi|659083535|ref|XP_008442408.1| (PREDICTED: selT-like protein [Cucumis melo])

HSP 1 Score: 433.7 bits (1114), Expect = 1.9e-118
Identity = 212/227 (93.39%), Postives = 218/227 (96.04%), Query Frame = 1

Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPAS-HPPPRVHYQPKSQPVIQEPPEFPTEK 60
           MDRT+IVLLGLPIFLLFTDIVNLFTPPPPKPA+ HPPPRVHYQPKSQ VIQEP EFPTEK
Sbjct: 1   MDRTRIVLLGLPIFLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQSVIQEPLEFPTEK 60

Query: 61  RSVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKI 120
           RSVIGGIGQG VININFCVSCSYRGTAI MKNMLESSFPGVEVILANYPPPFPKRLLSK+
Sbjct: 61  RSVIGGIGQGSVININFCVSCSYRGTAINMKNMLESSFPGVEVILANYPPPFPKRLLSKV 120

Query: 121 VPVVQFGIIGTIMAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           VPVVQFGIIG I+AGEHIFPRLGM PPPWYYSLRANRFGSIASTWLFGNF+QSFLQSSGA
Sbjct: 121 VPVVQFGIIGIIVAGEHIFPRLGMVPPPWYYSLRANRFGSIASTWLFGNFVQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS 227
           FEVYCNGEMVFSKLKEQRFPGEIELRDLIG+KLSG RF DNSGGVWS
Sbjct: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVDNSGGVWS 227

BLAST of Lsi03G022220 vs. NCBI nr
Match: gi|147854126|emb|CAN83419.1| (hypothetical protein VITISV_024323 [Vitis vinifera])

HSP 1 Score: 336.3 bits (861), Expect = 4.2e-89
Identity = 162/229 (70.74%), Postives = 190/229 (82.97%), Query Frame = 1

Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPASHPPPRVHYQPKSQPVIQEPP-EFPTEK 60
           MDR Q++L+GLP+FL F+DI+NLFTPPPPKP  H     H+  + QP  Q  P +FPT+K
Sbjct: 1   MDRAQLLLVGLPLFLFFSDIINLFTPPPPKPPPHHHHHHHHHQQPQPKPQSAPLDFPTQK 60

Query: 61  RSVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKI 120
            S IGGIG G  +NINFC SCSYRG A+TMKNMLES FPGV V+LANYPPP PKRLLSK+
Sbjct: 61  ESGIGGIGFGNTVNINFCSSCSYRGNAVTMKNMLESQFPGVTVVLANYPPPLPKRLLSKV 120

Query: 121 VPVVQFGIIGTIMAGEHIFPRLG-MAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSG 180
           VPVVQ G+IG +MAGE IFPRLG +APPPWYYSLRANRFG+I++TWL GNF+QSFLQSSG
Sbjct: 121 VPVVQIGVIGIVMAGEQIFPRLGFIAPPPWYYSLRANRFGTISTTWLLGNFLQSFLQSSG 180

Query: 181 AFEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSG-GVWS 227
           AFEVYCNGE+VFSKLK+QRFPGEIEL+DL+G++L   R  D+ G GVWS
Sbjct: 181 AFEVYCNGELVFSKLKQQRFPGEIELKDLVGQRLVASRIVDDVGAGVWS 229

BLAST of Lsi03G022220 vs. NCBI nr
Match: gi|225439410|ref|XP_002264265.1| (PREDICTED: selT-like protein [Vitis vinifera])

HSP 1 Score: 335.1 bits (858), Expect = 9.4e-89
Identity = 163/228 (71.49%), Postives = 191/228 (83.77%), Query Frame = 1

Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPASHPPPRVHYQPKSQPVIQEPPEFPTEKR 60
           MDR Q++L+GLP+FL F+DI+NLFTPPPPKP   PP   H QP+ +P    P +FPT+K 
Sbjct: 1   MDRAQLLLVGLPLFLFFSDIINLFTPPPPKP---PPHHHHQQPQPKPQ-SAPLDFPTQKE 60

Query: 61  SVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIV 120
           S IGGIG G  +NINFC SCSYRG A+TMKNMLES FPGV V+LANYPPP PKRLLSK+V
Sbjct: 61  SGIGGIGFGNTVNINFCSSCSYRGNAVTMKNMLESQFPGVTVVLANYPPPLPKRLLSKVV 120

Query: 121 PVVQFGIIGTIMAGEHIFPRLG-MAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           PVVQ G+IG +MAGE IFPRLG +APPPWYYSLRANRFG+I++TWL GNF+QSFLQSSGA
Sbjct: 121 PVVQIGVIGIVMAGEQIFPRLGFIAPPPWYYSLRANRFGTISTTWLLGNFLQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSG-GVWS 227
           FEVYCNGE+VFSKLK+QRFPGEIEL+DL+G++L   R  D+ G GVWS
Sbjct: 181 FEVYCNGELVFSKLKQQRFPGEIELKDLVGQRLVASRIVDDVGAGVWS 224

BLAST of Lsi03G022220 vs. NCBI nr
Match: gi|719993037|ref|XP_010253762.1| (PREDICTED: selT-like protein [Nelumbo nucifera])

HSP 1 Score: 328.9 bits (842), Expect = 6.8e-87
Identity = 153/227 (67.40%), Postives = 186/227 (81.94%), Query Frame = 1

Query: 1   MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPASHPPPRVHYQPKSQPVIQEPPEFPTEKR 60
           MDR Q++LLGLP+FL  +D++NLFTPPPPKP  H     H Q   +P++++  +FPT+K 
Sbjct: 1   MDRVQLLLLGLPLFLFCSDLINLFTPPPPKPPHHAHSHPHLQ--QEPIVKQALDFPTQKT 60

Query: 61  SVIGGIGQGCVININFCVSCSYRGTAITMKNMLESSFPGVEVILANYPPPFPKRLLSKIV 120
              G +G G  +NINFC SCSYRGTA+T+K MLE+SFPG++V+L+NYPP FPKRLLSK+V
Sbjct: 61  FGSGAVGFGSTVNINFCTSCSYRGTALTVKKMLETSFPGIDVVLSNYPPAFPKRLLSKLV 120

Query: 121 PVVQFGIIGTIMAGEHIFPRLG-MAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGA 180
           PVVQ G+IG +MAGE IFPRLG M PPPWY+S+RANRFG+IASTWLFGNF+QSFLQSSGA
Sbjct: 121 PVVQVGVIGIVMAGEQIFPRLGYMTPPPWYFSMRANRFGTIASTWLFGNFVQSFLQSSGA 180

Query: 181 FEVYCNGEMVFSKLKEQRFPGEIELRDLIGKKLSGPRFFDNSGGVWS 227
           FEVYCNGE+VFSKLKEQRFPGE ELRDL+ KKL+  R  D+ G  WS
Sbjct: 181 FEVYCNGELVFSKLKEQRFPGEGELRDLVSKKLASSRVVDDLGAAWS 225

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
SELT_ARATH7.7e-7564.35SelT-like protein OS=Arabidopsis thaliana GN=At3g47300 PE=2 SV=2[more]
HSP6_HETGL4.2e-2032.39Putative esophageal gland cell secretory protein 6 OS=Heterodera glycines GN=HSP... [more]
SELT_DROME1.2e-1431.21SelT-like protein OS=Drosophila melanogaster GN=CG3887 PE=2 SV=1[more]
SELT1_CAEEL1.3e-1326.76Putative selT-like protein C35C5.3 OS=Caenorhabditis elegans GN=C35C5.3 PE=3 SV=... [more]
Match NameE-valueIdentityDescription
A0A0A0LCS3_CUCSA3.6e-11993.83Uncharacterized protein OS=Cucumis sativus GN=Csa_3G731110 PE=4 SV=1[more]
E5GBE6_CUCME1.4e-11893.39Selenoprotein t OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A5BN73_VITVI2.9e-8970.74Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024323 PE=4 SV=1[more]
D7SY21_VITVI6.6e-8971.49Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0105g00440 PE=4 SV=... [more]
M5W272_PRUPE2.0e-8568.35Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015809mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G58640.12.6e-8164.60 Selenoprotein, Rdx type[more]
AT3G47300.14.4e-7664.35 SELT-like protein precursor[more]
Match NameE-valueIdentityDescription
gi|449439880|ref|XP_004137713.1|5.1e-11993.83PREDICTED: selT-like protein [Cucumis sativus][more]
gi|659083535|ref|XP_008442408.1|1.9e-11893.39PREDICTED: selT-like protein [Cucumis melo][more]
gi|147854126|emb|CAN83419.1|4.2e-8970.74hypothetical protein VITISV_024323 [Vitis vinifera][more]
gi|225439410|ref|XP_002264265.1|9.4e-8971.49PREDICTED: selT-like protein [Vitis vinifera][more]
gi|719993037|ref|XP_010253762.1|6.8e-8767.40PREDICTED: selT-like protein [Nelumbo nucifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019389Selenoprotein_T
IPR012336Thioredoxin-like_fold
IPR011893Selenoprotein_Rdx-typ
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005623 cell
molecular_function GO:0008430 selenium binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G022220.1Lsi03G022220.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011893Selenoprotein, Rdx typePFAMPF10262Rdxcoord: 72..208
score: 6.5
IPR011893Selenoprotein, Rdx typeTIGRFAMsTIGR02174TIGR02174coord: 72..209
score: 1.3
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 166..212
score: 3.6E-20coord: 72..99
score: 3.6
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 176..213
score: 1.5E-17coord: 70..109
score: 1.5
IPR019389Selenoprotein TPANTHERPTHR13544SELENOPROTEIN Tcoord: 1..226
score: 4.1E
NoneNo IPR availablePANTHERPTHR13544:SF1SUBFAMILY NOT NAMEDcoord: 1..226
score: 4.1E

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi03G022220Watermelon (97103) v2lsiwmbB235
Lsi03G022220Watermelon (97103) v2lsiwmbB241
Lsi03G022220Wax gourdlsiwgoB331
Lsi03G022220Wax gourdlsiwgoB339
Lsi03G022220Bottle gourd (USVL1VR-Ls)lsilsiB071
Lsi03G022220Bottle gourd (USVL1VR-Ls)lsilsiB127
Lsi03G022220Cucumber (Gy14) v1cgylsiB064
Lsi03G022220Cucumber (Gy14) v1cgylsiB596
Lsi03G022220Cucurbita maxima (Rimu)cmalsiB612
Lsi03G022220Cucurbita maxima (Rimu)cmalsiB667
Lsi03G022220Cucurbita maxima (Rimu)cmalsiB799
Lsi03G022220Cucurbita moschata (Rifu)cmolsiB408
Lsi03G022220Cucurbita moschata (Rifu)cmolsiB599
Lsi03G022220Cucurbita moschata (Rifu)cmolsiB656
Lsi03G022220Cucurbita moschata (Rifu)cmolsiB787
Lsi03G022220Cucurbita pepo (Zucchini)cpelsiB061
Lsi03G022220Cucurbita pepo (Zucchini)cpelsiB345
Lsi03G022220Wild cucumber (PI 183967)cpilsiB277
Lsi03G022220Wild cucumber (PI 183967)cpilsiB363
Lsi03G022220Cucumber (Chinese Long) v2culsiB277
Lsi03G022220Cucumber (Chinese Long) v2culsiB358
Lsi03G022220Melon (DHL92) v3.5.1lsimeB277
Lsi03G022220Melon (DHL92) v3.5.1lsimeB236
Lsi03G022220Watermelon (Charleston Gray)lsiwcgB241
Lsi03G022220Watermelon (Charleston Gray)lsiwcgB248
Lsi03G022220Watermelon (97103) v1lsiwmB252
Lsi03G022220Watermelon (97103) v1lsiwmB267
Lsi03G022220Cucumber (Gy14) v2cgyblsiB258
Lsi03G022220Cucumber (Gy14) v2cgyblsiB326
Lsi03G022220Melon (DHL92) v3.6.1lsimedB246
Lsi03G022220Melon (DHL92) v3.6.1lsimedB291
Lsi03G022220Silver-seed gourdcarlsiB529
Lsi03G022220Silver-seed gourdcarlsiB604
Lsi03G022220Cucumber (Chinese Long) v3cuclsiB298
Lsi03G022220Cucumber (Chinese Long) v3cuclsiB379