Lsi03G022210 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G022210
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionALC-interacting protein
Locationchr03 : 33239215 .. 33240442 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCAACTCCGGCGACCACCATTCCGGCTGTTTTTCCGGCATGCTGCGGCGGCTGCTTTGCACTGGCAACCTTCCCACTCACCCATCTGAAGCTCTAAACGAATCACGATTTAATATACCAAAAGCAGAGGCTAAACTTGTGGCTCGAGCGGCCGAGTCCGGACCGGGCGTGGTGGCTCGGCTGATGGGTTTGAGTTCGCTTCCAGATGCCAATTGGGTCCCGAACCATCGAGCCAGACCAGGTGCGGTCTCGCGGAGCAAGTCCGTGAATTTCGTTGATTATTTGCTGGATTTCGACTCGAACCAAGCCCACCACCGCCGAATCCGAACCTCCGCTTCGTTTCGTGAGGTCCCACCATTAAACCCACACAGTGATTTCTTTGTTGTATGCACGAAGGATTATTTCGACGGTTACGGAATTGAATCCAATTTGAAGAAACCCGAAACGCACCGTTTTGACGAAAGGAAACAGGGAAAGGAACAGAGCATGAACAGTAATGATTTGAAGAAGAAGAAGAAGAAGAAGAAAGAAAATGCAAGGAATGAAATCAAGATTTCAAAGCTTAAAGACGAGCCAAGAAGGGTAAATAGAAAGAATTTCACCGAGAGTAAAAAATGCAGCATGGGTAGAGATTCGGTCTCTGTTTTACCTTCGTGTAACTACAAATACAAACAGAGTATCCACAAAAAGCAAAACAAAGCCGCCATTGGAACGGAGCTCAACAAGAAGATGAACAAGAAGAAGAAGAACTTTCGGCATGTCGGACAGAAACCCGACATCGAACCCGACCCGGAAGATTTCAGTCCAGTTTCGGTTCTTGATGTCGGCGGAATCGATTTCTCAGGTAATTTAATCATCTTATCATTTTTAAAGTCACCACCATAGTTTTGAATGATTCAAAACTAATTTTGATGAATGAAAATTATAAAAATGGAAAATTAAATATTAAATTATTTTCAAAATGTGATTTTTTTTTTTTTTTTTCTAATTATGAATTTCTACAGATGAGAGGCAAATTTGTGCGAAGAACAGAGATTACGATTATGGTGAATTGGTGGAAAGGATATGCAGATTGGCAGAGGAAGATATAAGAGAGGCAAAATGGACGGGTAAGATTAAGAACGTGGATGAATCTGAAGCGTTGGAAGAATTATGCATGGAGATTGAACGACATGTCGTCGATGTATTGTTGGTTCACACTCTGGACGAGTTAGTGTACTTGTAG

mRNA sequence

ATGCCCAACTCCGGCGACCACCATTCCGGCTGTTTTTCCGGCATGCTGCGGCGGCTGCTTTGCACTGGCAACCTTCCCACTCACCCATCTGAAGCTCTAAACGAATCACGATTTAATATACCAAAAGCAGAGGCTAAACTTGTGGCTCGAGCGGCCGAGTCCGGACCGGGCGTGGTGGCTCGGCTGATGGGTTTGAGTTCGCTTCCAGATGCCAATTGGGTCCCGAACCATCGAGCCAGACCAGGTGCGGTCTCGCGGAGCAAGTCCGTGAATTTCGTTGATTATTTGCTGGATTTCGACTCGAACCAAGCCCACCACCGCCGAATCCGAACCTCCGCTTCGTTTCGTGAGGTCCCACCATTAAACCCACACAGTGATTTCTTTGTTGTATGCACGAAGGATTATTTCGACGGTTACGGAATTGAATCCAATTTGAAGAAACCCGAAACGCACCGTTTTGACGAAAGGAAACAGGGAAAGGAACAGAGCATGAACAGTAATGATTTGAAGAAGAAGAAGAAGAAGAAGAAAGAAAATGCAAGGAATGAAATCAAGATTTCAAAGCTTAAAGACGAGCCAAGAAGGAACAGAGATTACGATTATGGTGAATTGGTGGAAAGGATATGCAGATTGGCAGAGGAAGATATAAGAGAGGCAAAATGGACGGGTAAGATTAAGAACGTGGATGAATCTGAAGCGTTGGAAGAATTATGCATGGAGATTGAACGACATGTCGTCGATGTATTGTTGGTTCACACTCTGGACGAGTTAGTGTACTTGTAG

Coding sequence (CDS)

ATGCCCAACTCCGGCGACCACCATTCCGGCTGTTTTTCCGGCATGCTGCGGCGGCTGCTTTGCACTGGCAACCTTCCCACTCACCCATCTGAAGCTCTAAACGAATCACGATTTAATATACCAAAAGCAGAGGCTAAACTTGTGGCTCGAGCGGCCGAGTCCGGACCGGGCGTGGTGGCTCGGCTGATGGGTTTGAGTTCGCTTCCAGATGCCAATTGGGTCCCGAACCATCGAGCCAGACCAGGTGCGGTCTCGCGGAGCAAGTCCGTGAATTTCGTTGATTATTTGCTGGATTTCGACTCGAACCAAGCCCACCACCGCCGAATCCGAACCTCCGCTTCGTTTCGTGAGGTCCCACCATTAAACCCACACAGTGATTTCTTTGTTGTATGCACGAAGGATTATTTCGACGGTTACGGAATTGAATCCAATTTGAAGAAACCCGAAACGCACCGTTTTGACGAAAGGAAACAGGGAAAGGAACAGAGCATGAACAGTAATGATTTGAAGAAGAAGAAGAAGAAGAAGAAAGAAAATGCAAGGAATGAAATCAAGATTTCAAAGCTTAAAGACGAGCCAAGAAGGAACAGAGATTACGATTATGGTGAATTGGTGGAAAGGATATGCAGATTGGCAGAGGAAGATATAAGAGAGGCAAAATGGACGGGTAAGATTAAGAACGTGGATGAATCTGAAGCGTTGGAAGAATTATGCATGGAGATTGAACGACATGTCGTCGATGTATTGTTGGTTCACACTCTGGACGAGTTAGTGTACTTGTAG

Protein sequence

MPNSGDHHSGCFSGMLRRLLCTGNLPTHPSEALNESRFNIPKAEAKLVARAAESGPGVVARLMGLSSLPDANWVPNHRARPGAVSRSKSVNFVDYLLDFDSNQAHHRRIRTSASFREVPPLNPHSDFFVVCTKDYFDGYGIESNLKKPETHRFDERKQGKEQSMNSNDLKKKKKKKKENARNEIKISKLKDEPRRNRDYDYGELVERICRLAEEDIREAKWTGKIKNVDESEALEELCMEIERHVVDVLLVHTLDELVYL
Homology
[Close]
BLAST of Lsi03G022210 vs. TrEMBL
Match: E5GBE7_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.1e-82
Identity = 162/195 (83.08%), Postives = 176/195 (90.26%), Query Frame = 1 

Query: 1   MPNSGDHHSGCFSGMLRRLLCTGNLPTHPSEALNESRFNIPKAEAKLVARAAESGPGVVA 60
           MPNS   +SGCFSG+LRRLLCTGNLPTHPSEAL+ES+F+IPK EAKL A++AES PGVVA
Sbjct: 1   MPNSAHPNSGCFSGILRRLLCTGNLPTHPSEALHESQFDIPKTEAKLAAQSAESTPGVVA 60

Query: 61  RLMGLSSLPDANWVPNHRARPGAVSRSKSVNFVDYLLDFDSNQAHHRRIRTSASFREVPP 120
           RLMGLSSLPDANWVPNH+ RPGAVSRSKSVNF DYLLDFDSNQ+HHRRIRTSASFREVPP
Sbjct: 61  RLMGLSSLPDANWVPNHQVRPGAVSRSKSVNFADYLLDFDSNQSHHRRIRTSASFREVPP 120

Query: 121 LNPHSDFFVVCTKDYFDGYGIESNLKKPETHRFDERKQGKEQSMNSNDLKKKKKKKKENA 180
           LNPH+DFFV+ TKD F+GYGIESNLKKPET RFDE KQ      +SNDL KKKKKKKENA
Sbjct: 121 LNPHNDFFVLYTKDCFNGYGIESNLKKPETQRFDEGKQ------SSNDL-KKKKKKKENA 180

Query: 181 RNEIKISKLKDEPRR 196
           RNE+KISKLKDEPRR
Sbjct: 181 RNEMKISKLKDEPRR 188

[Close]
BLAST of Lsi03G022210 vs. TrEMBL
Match: A0A0A0L9V4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G731120 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 6.4e-80
Identity = 159/195 (81.54%), Postives = 172/195 (88.21%), Query Frame = 1 

Query: 1   MPNSGDHHSGCFSGMLRRLLCTGNLPTHPSEALNESRFNIPKAEAKLVARAAESGPGVVA 60
           MPNS   +S CFSG+LRRLLCTGNLPTHPSEALN+S+F+IPK EAKLVA++AES PGVVA
Sbjct: 1   MPNSAHPNSCCFSGILRRLLCTGNLPTHPSEALNDSQFDIPKTEAKLVAQSAESTPGVVA 60

Query: 61  RLMGLSSLPDANWVPNHRARPGAVSRSKSVNFVDYLLDFDSNQAHHRRIRTSASFREVPP 120
           RLMGLSSLPDANWVPNHRARPGAVSRSKSVNF DYLLDFDSNQ+HHRRIRTSASFREV  
Sbjct: 61  RLMGLSSLPDANWVPNHRARPGAVSRSKSVNFADYLLDFDSNQSHHRRIRTSASFREV-- 120

Query: 121 LNPHSDFFVVCTKDYFDGYGIESNLKKPETHRFDERKQGKEQSMNSNDLKKKKKKKKENA 180
             PH+D+FV+ TKDYFDGYGIESN KKPET RFDE KQ      +SNDL KKKKKKKEN 
Sbjct: 121 --PHNDYFVLYTKDYFDGYGIESNSKKPETQRFDEGKQ------SSNDLNKKKKKKKENG 180

Query: 181 RNEIKISKLKDEPRR 196
           RNE+KISKLKDEPRR
Sbjct: 181 RNEMKISKLKDEPRR 185

[Close]
BLAST of Lsi03G022210 vs. TrEMBL
Match: M5VY98_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006052mg PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.5e-32
Identity = 98/220 (44.55%), Postives = 132/220 (60.00%), Query Frame = 1 

Query: 1   MPNSGDHHSGCFSGMLRRLLCTGNLPTHPSEALNE---SRFNI----PKAEAKLVARAAE 60
           M  + +  S CF+G+LRRLLC+G++PTHP++ + E   ++  +    P  + K+ + A+ 
Sbjct: 1   MTQNVNQSSDCFNGVLRRLLCSGSVPTHPTDQIAEPYTTQLTLLPEKPNPDLKIQSSASS 60

Query: 61  SGPGVVARLMGLSSLPDANWVPNHRARPGAVSRSKSVNFVDYLLDFD----SNQAHHRRI 120
             PG+VARLMGL SLP+ NWV   + RP  VSRS+SV+F DYL+DFD      Q HHRR+
Sbjct: 61  VTPGIVARLMGLDSLPETNWV--SKGRPDLVSRSRSVSFADYLMDFDLADQDRQHHHRRV 120

Query: 121 RTSASFREVPPLNPHS---DFFVVCTKDYFDGYGIESNLKKPETHRFDERKQGKEQSMNS 180
           RTS SFREVP    H    DF +V   +      I S +KK E   F E KQGK++  + 
Sbjct: 121 RTSVSFREVPAALNHQKSPDFLLVYLDNVDKSKEIGSKVKKSEM-GFGELKQGKKEQRSR 180

Query: 181 ND----------LKKKKKKKKENA-RNEIKISKLKDEPRR 196
           N           +K+KKKK+K  A +   KISKLKDEPRR
Sbjct: 181 NKENSKRESDEIMKQKKKKEKMVAVKQNKKISKLKDEPRR 217

[Close]
BLAST of Lsi03G022210 vs. TrEMBL
Match: A0A061EY71_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_021678 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 5.5e-31
Identity = 94/204 (46.08%), Postives = 123/204 (60.29%), Query Frame = 1 

Query: 1   MPNSGDHHSGCFSGMLRRLLCTGNLPTHPSEALNESRFN-IPKAEAKLVARAAESGPGVV 60
           M N+    SGCFS ++RRLLC+G+  THPSE + ES  N     EAK+  +A+ESGPG+V
Sbjct: 1   MSNTQSSSSGCFSAVVRRLLCSGSPQTHPSEDIKESTTNGFVGDEAKVQVKASESGPGIV 60

Query: 61  ARLMGLSSLPDANWVPNHRARPGAVSRSKSVNFVDYLLDFDSNQAHHRRIRTSASFREVP 120
           ARLMGL SLP+ NWV      PG V+RS+SVNF+DY+L+FD   A HRR++TSASFREVP
Sbjct: 61  ARLMGLDSLPEKNWVQKGN-NPGPVTRSRSVNFMDYMLEFDLANAKHRRVKTSASFREVP 120

Query: 121 ------PLNPHSDFFVVCTKDYFDG--YGIESNLKKPETHRFDERKQGKEQSMNSNDLKK 180
                   N + DF VV    Y D      E+ LK  ++ + D      +      +L++
Sbjct: 121 QGPQLLQHNHNHDFLVV----YLDSADKSNEAGLKPRKSEKGD--GSSSKHDKQKENLRE 180

Query: 181 KKKKKKENARNEIKISKLKDEPRR 196
           K   K EN     KI+KLK+E RR
Sbjct: 181 KVACKGENQEKNKKIAKLKNERRR 197

[Close]
BLAST of Lsi03G022210 vs. TrEMBL
Match: W9RW68_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016401 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.0e-29
Identity = 93/214 (43.46%), Postives = 126/214 (58.88%), Query Frame = 1 

Query: 1   MPNSGDHHSGCFSGMLRRLLCTGNLPTHPSEALNES---------RFNIPKAEAKLVARA 60
           M  S   ++GCFSG++RR+LCTGN+PTHPS+ + ++            + K E K  ++A
Sbjct: 1   MAKSEASNAGCFSGIIRRMLCTGNVPTHPSDQITDNYSKTTILDDMKKLKKDEKKPESQA 60

Query: 61  -AESGPGVVARLMGLSSLP-DANWVPNHRARPGAVSRSKSVNFVDYLLDFD-SNQAH--- 120
            +  GP ++A+LMGL SLP D NW P  R  P + SRS+SVNF DYLL FD ++Q+H   
Sbjct: 61  QSGGGPSIIAKLMGLDSLPADTNWAPKGRT-PDSFSRSRSVNFADYLLKFDLTDQSHSHQ 120

Query: 121 HRRIRTSASFREVP----PLNPHSDFFVVCTKDYFDGYGIESNLKKPETHRFDERKQGKE 180
           HRR+RTS SFREVP      N + DF VV    Y D     S   K     F E KQGK 
Sbjct: 121 HRRVRTSVSFREVPASFRQQNQNHDFLVV----YLDNSDDSSKEMKKSEMGFREEKQGKR 180

Query: 181 QSMNSNDLKKKKKKKKENARNEIKISKLKDEPRR 196
           +  +  +  +  + KKEN +   +ISKLK+EPR+
Sbjct: 181 KEKSIKEY-QSVRLKKENEKTNNRISKLKNEPRK 208

[Close]
BLAST of Lsi03G022210 vs. TAIR10
Match: AT5G01370.1 (AT5G01370.1 ALC-interacting protein 1)

HSP 1 Score: 62.8 bits (151), Expect = 3.7e-10
Identity = 68/237 (28.69%), Postives = 96/237 (40.51%), Query Frame = 1 

Query: 1   MPNSGDHHSGCFSGMLRRLLCTGNLPTHPSEALNESRFNI-----------PKAEAKLVA 60
           M    +  +GC + ++RRLLC+G+  THPS+ + +S   +           PK E K   
Sbjct: 1   MTQRANPKTGCLTAVVRRLLCSGSQQTHPSDNILDSDETLQLLISYEENEEPKKEIKTET 60

Query: 61  RAAESG-----------PGVVARLMGLS-SLPDANWVPNHRARPGAVSRSKSVNFVDYLL 120
                            P VVA+LMGL    P +           AV+RSKSVNF+DY+L
Sbjct: 61  ETQNDDVSLHPPPPPPPPNVVAKLMGLDHPAPGSKRFRYFDDSGSAVTRSKSVNFMDYIL 120

Query: 121 ----------DFDSNQAHHRRIRTSASFREVPPLNPH---------SDFFVVCTKDYFDG 180
                     D    Q   RR++ S SFRE+ P +            DF ++    Y D 
Sbjct: 121 KGHEEEEENEDEKDGQRQCRRVKASVSFREIVPTSARWSSNNQQKKHDFLLL----YLDK 180

Query: 181 YGIESNLKKPETHRFDERKQGKEQSMNSNDLKKKKKKKKENARNEIKISKLKDEPRR 196
              +  L    +    +R +   +      L     KKKE   NE    K KDEPR+
Sbjct: 181 LDEKRELVGSSSFSRSKRFEKVVEDSKKPPLPPSAPKKKE---NEKVAKKFKDEPRK 230

[Close]
BLAST of Lsi03G022210 vs. TAIR10
Match: AT5G58630.1 (AT5G58630.1 unknown protein)

HSP 1 Score: 58.9 bits (141), Expect = 5.3e-09
Identity = 71/252 (28.17%), Postives = 118/252 (46.83%), Query Frame = 1 

Query: 10  GCFSGMLRRLLCTGNLPTHPSEALNESRFN----IPKAEAKLVARAAESGPGVVARLMGL 69
           GC S +L+R LC+G   T+PS+ + E  F     IP+       R    GPG VARLMGL
Sbjct: 23  GCISIILQRFLCSGTSSTYPSDLITEPSFKSRDFIPEP-----LRGRGDGPGAVARLMGL 82

Query: 70  SSLPDANWVPNHRARPGAVSRSKSVNFVDYLLDFDSNQAHHRRIRTSASFREVPPLNPHS 129
            S+P  +       +   +SRS SVN +    D D  Q  HRR++++  + E+       
Sbjct: 83  DSIPVID-------KTRFLSRSHSVNHLK--RDDDEIQGKHRRVKSTLEYVEL----EDD 142

Query: 130 DFFVVCTKDYFDGYGIESNLKKPETHRFDERKQGKEQSMNSNDLKKKKKKKKENARNEIK 189
           DFF++        +  + N K+  T    +R+  +E    + D  +   + KEN  N + 
Sbjct: 143 DFFIL-------SFEKDKNDKELGTRNCKKRRDTRENQSKTED--QTHLEGKENNINAMN 202

Query: 190 ISKLKDEPRRNRDYDYGELVERICRLAEEDIREAKWTGKIKNVDESEALEEL-CMEIERH 249
           +S     P R R  + GEL++R  +   +  R+ K T   +N+++   ++   C   E  
Sbjct: 203 VS-----PGRER-LEIGELMQR-RKEKRKSRRKRKETKLRQNIEKENWVQSNGCWSKEED 240

Query: 250 VVDVLLVHTLDE 257
           +V+  +  T +E
Sbjct: 263 LVNCEVRSTKEE 240

[Close]
BLAST of Lsi03G022210 vs. NCBI nr
Match: gi|659083538|ref|XP_008442409.1| (PREDICTED: uncharacterized protein LOC103486287 [Cucumis melo])

HSP 1 Score: 314.7 bits (805), Expect = 1.5e-82
Identity = 162/195 (83.08%), Postives = 176/195 (90.26%), Query Frame = 1 

Query: 1   MPNSGDHHSGCFSGMLRRLLCTGNLPTHPSEALNESRFNIPKAEAKLVARAAESGPGVVA 60
           MPNS   +SGCFSG+LRRLLCTGNLPTHPSEAL+ES+F+IPK EAKL A++AES PGVVA
Sbjct: 1   MPNSAHPNSGCFSGILRRLLCTGNLPTHPSEALHESQFDIPKTEAKLAAQSAESTPGVVA 60

Query: 61  RLMGLSSLPDANWVPNHRARPGAVSRSKSVNFVDYLLDFDSNQAHHRRIRTSASFREVPP 120
           RLMGLSSLPDANWVPNH+ RPGAVSRSKSVNF DYLLDFDSNQ+HHRRIRTSASFREVPP
Sbjct: 61  RLMGLSSLPDANWVPNHQVRPGAVSRSKSVNFADYLLDFDSNQSHHRRIRTSASFREVPP 120

Query: 121 LNPHSDFFVVCTKDYFDGYGIESNLKKPETHRFDERKQGKEQSMNSNDLKKKKKKKKENA 180
           LNPH+DFFV+ TKD F+GYGIESNLKKPET RFDE KQ      +SNDL KKKKKKKENA
Sbjct: 121 LNPHNDFFVLYTKDCFNGYGIESNLKKPETQRFDEGKQ------SSNDL-KKKKKKKENA 180

Query: 181 RNEIKISKLKDEPRR 196
           RNE+KISKLKDEPRR
Sbjct: 181 RNEMKISKLKDEPRR 188

[Close]
BLAST of Lsi03G022210 vs. NCBI nr
Match: gi|449439882|ref|XP_004137714.1| (PREDICTED: uncharacterized protein LOC101211240 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 9.2e-80
Identity = 159/195 (81.54%), Postives = 172/195 (88.21%), Query Frame = 1 

Query: 1   MPNSGDHHSGCFSGMLRRLLCTGNLPTHPSEALNESRFNIPKAEAKLVARAAESGPGVVA 60
           MPNS   +S CFSG+LRRLLCTGNLPTHPSEALN+S+F+IPK EAKLVA++AES PGVVA
Sbjct: 1   MPNSAHPNSCCFSGILRRLLCTGNLPTHPSEALNDSQFDIPKTEAKLVAQSAESTPGVVA 60

Query: 61  RLMGLSSLPDANWVPNHRARPGAVSRSKSVNFVDYLLDFDSNQAHHRRIRTSASFREVPP 120
           RLMGLSSLPDANWVPNHRARPGAVSRSKSVNF DYLLDFDSNQ+HHRRIRTSASFREV  
Sbjct: 61  RLMGLSSLPDANWVPNHRARPGAVSRSKSVNFADYLLDFDSNQSHHRRIRTSASFREV-- 120

Query: 121 LNPHSDFFVVCTKDYFDGYGIESNLKKPETHRFDERKQGKEQSMNSNDLKKKKKKKKENA 180
             PH+D+FV+ TKDYFDGYGIESN KKPET RFDE KQ      +SNDL KKKKKKKEN 
Sbjct: 121 --PHNDYFVLYTKDYFDGYGIESNSKKPETQRFDEGKQ------SSNDLNKKKKKKKENG 180

Query: 181 RNEIKISKLKDEPRR 196
           RNE+KISKLKDEPRR
Sbjct: 181 RNEMKISKLKDEPRR 185

[Close]
BLAST of Lsi03G022210 vs. NCBI nr
Match: gi|645221102|ref|XP_008243572.1| (PREDICTED: uncharacterized protein LOC103341794 [Prunus mume])

HSP 1 Score: 146.0 bits (367), Expect = 9.3e-32
Identity = 96/210 (45.71%), Postives = 126/210 (60.00%), Query Frame = 1 

Query: 11  CFSGMLRRLLCTGNLPTHPSEALNE---SRFNI----PKAEAKLVARAAESGPGVVARLM 70
           CF+G+LRRLLC+G++PTHP++ + E   ++  +    P  + K+ + A+   PG+VARLM
Sbjct: 5   CFNGVLRRLLCSGSVPTHPTDQIAEPYTTQLTLLPGKPNPDLKIQSSASSVTPGIVARLM 64

Query: 71  GLSSLPDANWVPNHRARPGAVSRSKSVNFVDYLLDFD----SNQAHHRRIRTSASFREVP 130
           GL SLP+ NWV   RA P  VSRS+SV+F DYL+DFD      Q HHRR+RTS SFREVP
Sbjct: 65  GLDSLPETNWVSKGRA-PDLVSRSRSVSFADYLMDFDLADQDRQHHHRRVRTSVSFREVP 124

Query: 131 PLNPHS---DFFVVCTKDYFDGYGIESNLKKPETHRFDERKQGKEQSMNSND-------- 190
               H    DF +V   +      I S +KK E   F E KQGK++  + N         
Sbjct: 125 AALNHQKSPDFLLVYLDNVDKSKEIGSKVKKSEM-GFGELKQGKKEQSSRNKENSKRESD 184

Query: 191 ---LKKKKKKKKENARNEIKISKLKDEPRR 196
               +KKKK+K  N +   KISKLKDEPRR
Sbjct: 185 EIMKQKKKKEKMVNIKQNKKISKLKDEPRR 212

[Close]
BLAST of Lsi03G022210 vs. NCBI nr
Match: gi|595824433|ref|XP_007205233.1| (hypothetical protein PRUPE_ppa006052mg [Prunus persica])

HSP 1 Score: 146.0 bits (367), Expect = 9.3e-32
Identity = 98/220 (44.55%), Postives = 132/220 (60.00%), Query Frame = 1 

Query: 1   MPNSGDHHSGCFSGMLRRLLCTGNLPTHPSEALNE---SRFNI----PKAEAKLVARAAE 60
           M  + +  S CF+G+LRRLLC+G++PTHP++ + E   ++  +    P  + K+ + A+ 
Sbjct: 1   MTQNVNQSSDCFNGVLRRLLCSGSVPTHPTDQIAEPYTTQLTLLPEKPNPDLKIQSSASS 60

Query: 61  SGPGVVARLMGLSSLPDANWVPNHRARPGAVSRSKSVNFVDYLLDFD----SNQAHHRRI 120
             PG+VARLMGL SLP+ NWV   + RP  VSRS+SV+F DYL+DFD      Q HHRR+
Sbjct: 61  VTPGIVARLMGLDSLPETNWV--SKGRPDLVSRSRSVSFADYLMDFDLADQDRQHHHRRV 120

Query: 121 RTSASFREVPPLNPHS---DFFVVCTKDYFDGYGIESNLKKPETHRFDERKQGKEQSMNS 180
           RTS SFREVP    H    DF +V   +      I S +KK E   F E KQGK++  + 
Sbjct: 121 RTSVSFREVPAALNHQKSPDFLLVYLDNVDKSKEIGSKVKKSEM-GFGELKQGKKEQRSR 180

Query: 181 ND----------LKKKKKKKKENA-RNEIKISKLKDEPRR 196
           N           +K+KKKK+K  A +   KISKLKDEPRR
Sbjct: 181 NKENSKRESDEIMKQKKKKEKMVAVKQNKKISKLKDEPRR 217

[Close]
BLAST of Lsi03G022210 vs. NCBI nr
Match: gi|932860307|emb|CUQ97473.1| (expressed protein [Escherichia coli])

HSP 1 Score: 142.9 bits (359), Expect = 7.9e-31
Identity = 94/204 (46.08%), Postives = 123/204 (60.29%), Query Frame = 1 

Query: 1   MPNSGDHHSGCFSGMLRRLLCTGNLPTHPSEALNESRFN-IPKAEAKLVARAAESGPGVV 60
           M N+    SGCFS ++RRLLC+G+  THPSE + ES  N     EAK+  +A+ESGPG+V
Sbjct: 1   MSNTQSSSSGCFSAVVRRLLCSGSPQTHPSEDIKESTTNGFVGDEAKVQVKASESGPGIV 60

Query: 61  ARLMGLSSLPDANWVPNHRARPGAVSRSKSVNFVDYLLDFDSNQAHHRRIRTSASFREVP 120
           ARLMGL SLP+ NWV      PG V+RS+SVNF+DY+L+FD   A HRR++TSASFREVP
Sbjct: 61  ARLMGLDSLPEKNWVQKGN-NPGPVTRSRSVNFMDYMLEFDLANAKHRRVKTSASFREVP 120

Query: 121 ------PLNPHSDFFVVCTKDYFDG--YGIESNLKKPETHRFDERKQGKEQSMNSNDLKK 180
                   N + DF VV    Y D      E+ LK  ++ + D      +      +L++
Sbjct: 121 QGPQLLQHNHNHDFLVV----YLDSADKSNEAGLKPRKSEKGD--GSSSKHDKQKENLRE 180

Query: 181 KKKKKKENARNEIKISKLKDEPRR 196
           K   K EN     KI+KLK+E RR
Sbjct: 181 KVACKGENQEKNKKIAKLKNERRR 197

The following BLAST results are available for this feature:
BLAST of Lsi03G022210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi03G022210 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBE7_CUCME1.1e-8283.08Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0L9V4_CUCSA6.4e-8081.54Uncharacterized protein OS=Cucumis sativus GN=Csa_3G731120 PE=4 SV=1[more]
M5VY98_PRUPE6.5e-3244.55Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006052mg PE=4 SV=1[more]
A0A061EY71_THECC5.5e-3146.08Uncharacterized protein OS=Theobroma cacao GN=TCM_021678 PE=4 SV=1[more]
W9RW68_9ROSA3.0e-2943.46Uncharacterized protein OS=Morus notabilis GN=L484_016401 PE=4 SV=1[more]
BLAST of Lsi03G022210 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G01370.13.7e-1028.69 ALC-interacting protein 1[more]
AT5G58630.15.3e-0928.17 unknown protein[more]
BLAST of Lsi03G022210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659083538|ref|XP_008442409.1|1.5e-8283.08PREDICTED: uncharacterized protein LOC103486287 [Cucumis melo][more]
gi|449439882|ref|XP_004137714.1|9.2e-8081.54PREDICTED: uncharacterized protein LOC101211240 [Cucumis sativus][more]
gi|645221102|ref|XP_008243572.1|9.3e-3245.71PREDICTED: uncharacterized protein LOC103341794 [Prunus mume][more]
gi|595824433|ref|XP_007205233.1|9.3e-3244.55hypothetical protein PRUPE_ppa006052mg [Prunus persica][more]
gi|932860307|emb|CUQ97473.1|7.9e-3146.08expressed protein [Escherichia coli][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G022210.1Lsi03G022210.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 170..192
scor
NoneNo IPR availablePANTHERPTHR35499FAMILY NOT NAMEDcoord: 1..195
score: 2.8
NoneNo IPR availablePANTHERPTHR35499:SF2ALC-INTERACTING PROTEIN 1coord: 1..195
score: 2.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi03G022210Csa3G731120Cucumber (Chinese Long) v2culsiB187
Lsi03G022210CSPI03G31210Wild cucumber (PI 183967)cpilsiB185
Lsi03G022210Cucsa.176430Cucumber (Gy14) v1cgylsiB296
Lsi03G022210CmaCh06G002240Cucurbita maxima (Rimu)cmalsiB754
Lsi03G022210CmoCh01G007010Cucurbita moschata (Rifu)cmolsiB408
Lsi03G022210CmoCh06G002180Cucurbita moschata (Rifu)cmolsiB747
Lsi03G022210Cla017996Watermelon (97103) v1lsiwmB240
Lsi03G022210MELO3C009159Melon (DHL92) v3.5.1lsimeB260
Lsi03G022210ClCG10G022200Watermelon (Charleston Gray)lsiwcgB219
Lsi03G022210MELO3C009159.2Melon (DHL92) v3.6.1lsimedB273
Lsi03G022210Cla97C10G205480Watermelon (97103) v2lsiwmbB218
Lsi03G022210Bhi11G001529Wax gourdlsiwgoB299
Lsi03G022210Cp4.1LG08g12330Cucurbita pepo (Zucchini)cpelsiB707
Lsi03G022210CsGy3G029050Cucumber (Gy14) v2cgyblsiB171
Lsi03G022210Carg01110Silver-seed gourdcarlsiB141
Lsi03G022210CsaV3_3G033690Cucumber (Chinese Long) v3cuclsiB203
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi03G022210Cucumber (Chinese Long) v3cuclsiB298
Lsi03G022210Cucumber (Chinese Long) v3cuclsiB379
Lsi03G022210Watermelon (97103) v2lsiwmbB235
Lsi03G022210Watermelon (97103) v2lsiwmbB241
Lsi03G022210Wax gourdlsiwgoB331
Lsi03G022210Wax gourdlsiwgoB339
Lsi03G022210Bottle gourd (USVL1VR-Ls)lsilsiB071
Lsi03G022210Bottle gourd (USVL1VR-Ls)lsilsiB127
Lsi03G022210Cucumber (Gy14) v1cgylsiB064
Lsi03G022210Cucumber (Gy14) v1cgylsiB596
Lsi03G022210Cucurbita maxima (Rimu)cmalsiB242
Lsi03G022210Cucurbita maxima (Rimu)cmalsiB612
Lsi03G022210Cucurbita maxima (Rimu)cmalsiB667
Lsi03G022210Cucurbita maxima (Rimu)cmalsiB799
Lsi03G022210Cucurbita moschata (Rifu)cmolsiB230
Lsi03G022210Cucurbita moschata (Rifu)cmolsiB599
Lsi03G022210Cucurbita moschata (Rifu)cmolsiB656
Lsi03G022210Cucurbita moschata (Rifu)cmolsiB787
Lsi03G022210Cucurbita pepo (Zucchini)cpelsiB061
Lsi03G022210Cucurbita pepo (Zucchini)cpelsiB345
Lsi03G022210Cucurbita pepo (Zucchini)cpelsiB503
Lsi03G022210Wild cucumber (PI 183967)cpilsiB277
Lsi03G022210Wild cucumber (PI 183967)cpilsiB363
Lsi03G022210Cucumber (Chinese Long) v2culsiB277
Lsi03G022210Cucumber (Chinese Long) v2culsiB358
Lsi03G022210Melon (DHL92) v3.5.1lsimeB277
Lsi03G022210Melon (DHL92) v3.5.1lsimeB236
Lsi03G022210Watermelon (Charleston Gray)lsiwcgB241
Lsi03G022210Watermelon (Charleston Gray)lsiwcgB248
Lsi03G022210Watermelon (97103) v1lsiwmB252
Lsi03G022210Watermelon (97103) v1lsiwmB267
Lsi03G022210Cucumber (Gy14) v2cgyblsiB258
Lsi03G022210Cucumber (Gy14) v2cgyblsiB326
Lsi03G022210Melon (DHL92) v3.6.1lsimedB246
Lsi03G022210Melon (DHL92) v3.6.1lsimedB291
Lsi03G022210Silver-seed gourdcarlsiB529
Lsi03G022210Silver-seed gourdcarlsiB604
Lsi03G022210Silver-seed gourdcarlsiB915