CsGy3G029050 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCAACTCCGCCCACCCCAATTCCTGCTGCTTTTCCGGCATCCTGAGGCGCCTTCTTTGCACCGGCAACCTTCCCACTCACCCATCTGAAGCTCTAAACGATTCACAATTTGATATACCAAAGACAGAGGCTAAACTCGTGGCTCAATCGGCCGAGTCCACGCCCGGCGTGGTGGCTCGACTGATGGGCTTGAGTTCGCTTCCAGACGCCAATTGGGTCCCGAACCACCGAGCCAGACCAGGTGCAGTCTCGCGGAGCAAGTCCGTGAATTTCGCTGATTATTTGCTTGATTTCGACTCCAACCAATCCCACCACCGCCGAATCCGAACCTCCGCTTCCTTCCGTGAGGTCCCACACAATGATTACTTTGTTCTATACACTAAGGATTATTTCGATGGTTATGGGATTGAATCCAATTCGAAGAAACCCGAAACGCAGCGTTTTGACGAAGGGAAACAGAGTAGTAATGATTTGAATAAGAAGAAGAAGAAGAAGAAGGAAAACGGGAGGAATGAAATGAAGATTTCGAAGCTTAAAGATGAGCCAAGAAGGGTAAACAGAAAAAACTTCACTGAGAGTAAAAAATGCAGCATGGGTAAAGATTCATTCTCTGTTTTACCTTCATGTAAACACAAATGCAAACAGAATGTCCCTAGAAATGAGAGTTCTGTTATTCAGAAGAAACCCACAAAGCAAAAGGAAGCCGCCATTAGAACAGAGCTCAACAAGAAAAAGAAGAAGAATGTTCGACACGTCGAACGGAAACCCGACGTCGAACCCGACTCGGAAAATTCCAGTCCAGTTTCGGTTCTTGATGTCGGCAGAATCGATTTCTCAGGTTCAATTCAATTTTGATTTTAGTAAACTATCTTAAAACTGATTTAAATCTCATTTTCAAAATGTAAATTTTTGTAATTGTGGATTTCTACAGATGAGAGGCAAATTGGTGGGAAGAACAGAGTTTACGATTATGGAGAATTGGTGGAAAGGATATGCAGATTGGCAGAAGAAGACATAAGAGAGGCAAAATGGACGGCTGAGATTAAGAATGTGGATGAATCTGAAGCGTTGGAAGAAATATGCATGGAGATTGAACGACATGTCGTCGATGCACTGTTAGTTCACACTCTAAATGAGTTTGCATACTTGTAGGCTATATTATTGAGATGCAACTCCTTAATAAAGACAAAAAAAGAACATCTTAATCTGTACATTAGCTCAATAGAGGTCTCCTTTTGAGGTAATATATCTAAACCTAGGGGGAAAATTGTAGAAAAGGTATTTAGGACAGATGTATAGTTGACTTAAGTCAACAATTCAGAGTATGGGTTTATGTTAATTTAATGAATTAAGAAAATTTTGGACCCACCTAATGTTACAAGTCTTATAAAGTGATTATCATTTCTACCTAATTTTAACTTTATTGTGAATCATGTTGAATTTGATTGAGTCCTTTGTTGGAAAATTAATGTCTACTACTTACTTACTTTTTAAAACTTCGTATGAAAGGTTGTAGACTAATGCCTAATTTCATTAGAGAATGTGTGAAAGAGATGGAATTGAGATGGAGGTGTCTCTAAATAACTAGTAATTGTCATAATTGATAGAAATAAATAAATAAATAAACAG ATGCCCAACTCCGCCCACCCCAATTCCTGCTGCTTTTCCGGCATCCTGAGGCGCCTTCTTTGCACCGGCAACCTTCCCACTCACCCATCTGAAGCTCTAAACGATTCACAATTTGATATACCAAAGACAGAGGCTAAACTCGTGGCTCAATCGGCCGAGTCCACGCCCGGCGTGGTGGCTCGACTGATGGGCTTGAGTTCGCTTCCAGACGCCAATTGGGTCCCGAACCACCGAGCCAGACCAGGTGCAGTCTCGCGGAGCAAGTCCGTGAATTTCGCTGATTATTTGCTTGATTTCGACTCCAACCAATCCCACCACCGCCGAATCCGAACCTCCGCTTCCTTCCGTGAGGTCCCACACAATGATTACTTTGTTCTATACACTAAGGATTATTTCGATGGTTATGGGATTGAATCCAATTCGAAGAAACCCGAAACGCAGCGTTTTGACGAAGGGAAACAGAGTAGTAATGATTTGAATAAGAAGAAGAAGAAGAAGAAGGAAAACGGGAGGAATGAAATGAAGATTTCGAAGCTTAAAGATGAGCCAAGAAGGGTAAACAGAAAAAACTTCACTGAGAGTAAAAAATGCAGCATGGGTAAAGATTCATTCTCTGTTTTACCTTCATGTAAACACAAATGCAAACAGAATGTCCCTAGAAATGAGAGTTCTGTTATTCAGAAGAAACCCACAAAGCAAAAGGAAGCCGCCATTAGAACAGAGCTCAACAAGAAAAAGAAGAAGAATGTTCGACACGTCGAACGGAAACCCGACGTCGAACCCGACTCGGAAAATTCCAGTCCAGTTTCGGTTCTTGATGTCGGCAGAATCGATTTCTCAGATGAGAGGCAAATTGGTGGGAAGAACAGAGTTTACGATTATGGAGAATTGGTGGAAAGGATATGCAGATTGGCAGAAGAAGACATAAGAGAGGCAAAATGGACGGCTGAGATTAAGAATGTGGATGAATCTGAAGCGTTGGAAGAAATATGCATGGAGATTGAACGACATGTCGTCGATGCACTGTTAGTTCACACTCTAAATGAGTTTGCATACTTGTAGGCTATATTATTGAGATGCAACTCCTTAATAAAGACAAAAAAAGAACATCTTAATCTGTACATTAGCTCAATAGAGGTCTCCTTTTGAGGTAATATATCTAAACCTAGGGGGAAAATTGTAGAAAAGGTATTTAGGACAGATGTATAGTTGACTTAAGTCAACAATTCAGAGTATGGGTTTATGTTAATTTAATGAATTAAGAAAATTTTGGACCCACCTAATGTTACAAGTCTTATAAAGTGATTATCATTTCTACCTAATTTTAACTTTATTGTGAATCATGTTGAATTTGATTGAGTCCTTTGTTGGAAAATTAATGTCTACTACTTACTTACTTTTTAAAACTTCGTATGAAAGGTTGTAGACTAATGCCTAATTTCATTAGAGAATGTGTGAAAGAGATGGAATTGAGATGGAGGTGTCTCTAAATAACTAGTAATTGTCATAATTGATAGAAATAAATAAATAAATAAACAG ATGCCCAACTCCGCCCACCCCAATTCCTGCTGCTTTTCCGGCATCCTGAGGCGCCTTCTTTGCACCGGCAACCTTCCCACTCACCCATCTGAAGCTCTAAACGATTCACAATTTGATATACCAAAGACAGAGGCTAAACTCGTGGCTCAATCGGCCGAGTCCACGCCCGGCGTGGTGGCTCGACTGATGGGCTTGAGTTCGCTTCCAGACGCCAATTGGGTCCCGAACCACCGAGCCAGACCAGGTGCAGTCTCGCGGAGCAAGTCCGTGAATTTCGCTGATTATTTGCTTGATTTCGACTCCAACCAATCCCACCACCGCCGAATCCGAACCTCCGCTTCCTTCCGTGAGGTCCCACACAATGATTACTTTGTTCTATACACTAAGGATTATTTCGATGGTTATGGGATTGAATCCAATTCGAAGAAACCCGAAACGCAGCGTTTTGACGAAGGGAAACAGAGTAGTAATGATTTGAATAAGAAGAAGAAGAAGAAGAAGGAAAACGGGAGGAATGAAATGAAGATTTCGAAGCTTAAAGATGAGCCAAGAAGGGTAAACAGAAAAAACTTCACTGAGAGTAAAAAATGCAGCATGGGTAAAGATTCATTCTCTGTTTTACCTTCATGTAAACACAAATGCAAACAGAATGTCCCTAGAAATGAGAGTTCTGTTATTCAGAAGAAACCCACAAAGCAAAAGGAAGCCGCCATTAGAACAGAGCTCAACAAGAAAAAGAAGAAGAATGTTCGACACGTCGAACGGAAACCCGACGTCGAACCCGACTCGGAAAATTCCAGTCCAGTTTCGGTTCTTGATGTCGGCAGAATCGATTTCTCAGATGAGAGGCAAATTGGTGGGAAGAACAGAGTTTACGATTATGGAGAATTGGTGGAAAGGATATGCAGATTGGCAGAAGAAGACATAAGAGAGGCAAAATGGACGGCTGAGATTAAGAATGTGGATGAATCTGAAGCGTTGGAAGAAATATGCATGGAGATTGAACGACATGTCGTCGATGCACTGTTAGTTCACACTCTAAATGAGTTTGCATACTTGTAG MPNSAHPNSCCFSGILRRLLCTGNLPTHPSEALNDSQFDIPKTEAKLVAQSAESTPGVVARLMGLSSLPDANWVPNHRARPGAVSRSKSVNFADYLLDFDSNQSHHRRIRTSASFREVPHNDYFVLYTKDYFDGYGIESNSKKPETQRFDEGKQSSNDLNKKKKKKKENGRNEMKISKLKDEPRRVNRKNFTESKKCSMGKDSFSVLPSCKHKCKQNVPRNESSVIQKKPTKQKEAAIRTELNKKKKKNVRHVERKPDVEPDSENSSPVSVLDVGRIDFSDERQIGGKNRVYDYGELVERICRLAEEDIREAKWTAEIKNVDESEALEEICMEIERHVVDALLVHTLNEFAYL
BLAST of CsGy3G029050 vs. NCBI nr
Match: XP_004137714.1 (PREDICTED: uncharacterized protein LOC101211240 [Cucumis sativus] >KGN58750.1 hypothetical protein Csa_3G731120 [Cucumis sativus]) HSP 1 Score: 672.9 bits (1735), Expect = 5.8e-190 Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0
BLAST of CsGy3G029050 vs. NCBI nr
Match: XP_008442409.1 (PREDICTED: uncharacterized protein LOC103486287 [Cucumis melo] >ADN33789.1 hypothetical protein [Cucumis melo subsp. melo] >ADN34274.1 hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 609.8 bits (1571), Expect = 6.0e-171 Identity = 326/357 (91.32%), Postives = 340/357 (95.24%), Query Frame = 0
BLAST of CsGy3G029050 vs. NCBI nr
Match: XP_022145653.1 (uncharacterized protein LOC111015050 [Momordica charantia]) HSP 1 Score: 371.3 bits (952), Expect = 3.6e-99 Identity = 224/369 (60.70%), Postives = 257/369 (69.65%), Query Frame = 0
BLAST of CsGy3G029050 vs. NCBI nr
Match: XP_023540166.1 (uncharacterized protein LOC111800619 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 364.4 bits (934), Expect = 4.4e-97 Identity = 233/362 (64.36%), Postives = 264/362 (72.93%), Query Frame = 0
BLAST of CsGy3G029050 vs. NCBI nr
Match: XP_022942518.1 (uncharacterized protein LOC111447527 [Cucurbita moschata]) HSP 1 Score: 359.0 bits (920), Expect = 1.9e-95 Identity = 217/363 (59.78%), Postives = 248/363 (68.32%), Query Frame = 0
BLAST of CsGy3G029050 vs. TAIR10
Match: AT5G01370.1 (ALC-interacting protein 1) HSP 1 Score: 59.3 bits (142), Expect = 5.5e-09 Identity = 54/206 (26.21%), Postives = 84/206 (40.78%), Query Frame = 0
BLAST of CsGy3G029050 vs. TrEMBL
Match: tr|A0A0A0L9V4|A0A0A0L9V4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731120 PE=4 SV=1) HSP 1 Score: 672.9 bits (1735), Expect = 3.8e-190 Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0
BLAST of CsGy3G029050 vs. TrEMBL
Match: tr|E5GBE7|E5GBE7_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 609.8 bits (1571), Expect = 4.0e-171 Identity = 326/357 (91.32%), Postives = 340/357 (95.24%), Query Frame = 0
BLAST of CsGy3G029050 vs. TrEMBL
Match: tr|A0A1S3B6D9|A0A1S3B6D9_CUCME (uncharacterized protein LOC103486287 OS=Cucumis melo OX=3656 GN=LOC103486287 PE=4 SV=1) HSP 1 Score: 609.8 bits (1571), Expect = 4.0e-171 Identity = 326/357 (91.32%), Postives = 340/357 (95.24%), Query Frame = 0
BLAST of CsGy3G029050 vs. TrEMBL
Match: tr|A0A2C9V9N4|A0A2C9V9N4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G107700 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 4.3e-40 Identity = 145/413 (35.11%), Postives = 201/413 (48.67%), Query Frame = 0
BLAST of CsGy3G029050 vs. TrEMBL
Match: tr|A0A2C9VBX6|A0A2C9VBX6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G107700 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 4.3e-40 Identity = 145/413 (35.11%), Postives = 201/413 (48.67%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |