Lsi03G018260 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G018260
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionRNA pyrophosphohydrolase
Locationchr03 : 29770701 .. 29773227 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTAAGGTAACAACGACAAGAGGGTGAGGGTATTTTCGGAATAAAAAGATAGATTTGTGGCCTTTGGTACCTAAGGAAGCAAAACGGAGAACTTAGAAGGAAATTTCAAAACGCTTTATATAGAAGGAAAGAGACTTGGGAATCAAGTAAAACAAAACGACATCGTAATGGTCAGTTTGGGTATGTTTGGACCAAAATGCCCCTGTTATTTAATTAAATTCGCGTCAACGCCTAATTGGAAGGGGCTTCCGCTGTGTTCGTCTTCTTCTTCATCATCCATGGAGTTTCCTCCAGAAGGTTACAGAAGAGGCGTTGGGATTTGCCTTATCAATTCTTCTGGAAAAGTAGGAACGCTTCGTCGCCTTCTTCTTTCTCTGTTATCTTGTTTTCTTCTGATGATAATAATTTATCTGTCCAATTAATCTTTTGCAGATTTTTGCAGCTTCGAGGTTGAACAGGCCTGAAATCTGGGAAATGCCTCAGGTAGTTTCTATTCCGTCATATTTTGAGCTTTATTCATTGGGAAACAGGAAAGTACCGTCTCTCTGCTTTTTCTTAAGTACTTCTCTCGCTTTATTCTGTGCGAATCAGGGCATATAGATCTATAGGTTATATCTCTGATTTCCTTGTGGGAATATCCGAAAATTCTTTGTTGAGCTACCTTTTTGAAGAACTCCTTATATTTTCTCATACTCGCGTGAGAAGTTCGAGGATCCTCTGAAATGAGAAGGGGATTTTTGAATTATTCGTACTCGTCTCTCTCGAATTTACTCTTTGAACATAAAATTAGTGGAATTCTTGCAATGGCTGGAAAATTCCACCTGAAATTCCTTCTATTGTGCTGTGGGTTCTGGTTCTTTCCGTTGGAGAATTGTATTAGCTTTCAGAAAGCTGTTTACGGTACTTGATAATAATATTCAATGGCTGGTGTTTATTATGGTACTGATGGAAACTTTGACAATTTTGTGTGATTCTCATCTTTACAATCATGAGACTGAGAGGTGTTGGAAATTATGTCTTTTATCTTTTTTACAATTGGAGTATCTACATGAGTTAGCTTATATACAATTTAACTAGGAAACTCATAATTGACTTGAAATGATGGATTGATCCAATAACTTCAAAGTCATATAGATCTTTATAGTATTGTATGTAATGTATCCCTACATAATAGAAGTCTTCTTATTGCCTTGCGGAACTTGAAGCTTGTGGAGGATCCTCCTTAGATTTGTGTTCTTGATAATGATTTTCCATCATTCAGGGTGGTGTAAATGAAGGCGAAGATCTCAAAACTGCAGCCAAGAGAGAACTCATAGAAGAAACAGGAGTAGTTTCTGCAGAAATTATTGCAGAGGTATGCATTTTGAGATGCTTCCAGATATATAACTATGCAGCCTCCATATCTCATCTTTACATTGTATGATGAACTTTAGAAAAATGAAGTCTAGCTTCATTTAAATCGGGACTGATTCGATCCATGGTTAATATATAGCTACCCTACTGGCTTTCATACGATTTCTCGCCCGAAGTCAGCATCGGACTCAGCAAACACTGGGGAGTAATATACAAAGGCCAAACCCATAAGTGGTATTGCCACCTGAAAATCTGACTCCTATAACCTTTTAATGTCAAGGAACCTCCTTTTTGGAAAGTGTCTCCACAGTTTTTTGCTTTCTTGGTATAATCTTATTTTTTATCCTTAAAGAACCACTGGTTTGCGTATTTGGTAACTGTTTTTTCTTTCAGCTTCAAAAAATCTCAAAATGTATGGATTATGTTATTTCCCCTTCAAGCTTCCGTGTTCATTTGATCGAGCCTAAAGCTTTTGAACAGGTTTCTGATGAAGTTAACTGGAAAAGACGAAGAGATAAATCTTCTGGGTGATGGAACTGAAAGGCAAGAGTTTGGGGAGTGGTCATGGATGTCAATTGAACAGATACTGAACCAAGTGAGTAAACAACTACTAGCTTCATTCTTTCCCCTGCAACAATTTCTCTTAAATCTTTACAATCGTTTGAACAGGCTAACAAATCCCGGAAGCCTGTTTATGAACAAGTGATGAAGGAATTTGGTAACTTCATACTTGGAAATGGGGATGATGATATTTCTCTCAAGCAGAGTGAAACCCAATTAGTTAGCTGAAATGTTCAAATTCTGGTTTGGTAAGAAGATAATATATTTATCCATTGTACCACGATCATTGTAAGACTTATACCATACGAATCACAGTTTCATAGAAAATGGTGTATTTTCATATCTTTCATTATTCAAAATAAGAATGCCTTTATTTAAAGGTTTTGATAACTTTTGAGATAAGGCAGATATGTTTGATCCTTTTGGAATTTGGACGAGTGGTGGATTAATGTTCATATTTTTTGAAATCTAAGGCCAAGATATTGGAATCAGAACCATCACTAATTTGTGCAGCTGTAAAAGGATTTGAGTGTCCAAATACGAGATTGTAAATGATCTCCACGGGCTTGATTTTGACGCTCTTCTCGCCTTTTTACCTTTAAGGCCACGTTT

mRNA sequence

ATTTAAGGTAACAACGACAAGAGGGTGAGGGTATTTTCGGAATAAAAAGATAGATTTGTGGCCTTTGGTACCTAAGGAAGCAAAACGGAGAACTTAGAAGGAAATTTCAAAACGCTTTATATAGAAGGAAAGAGACTTGGGAATCAAGTAAAACAAAACGACATCGTAATGGTCAGTTTGGGTATGTTTGGACCAAAATGCCCCTGTTATTTAATTAAATTCGCGTCAACGCCTAATTGGAAGGGGCTTCCGCTGTGTTCGTCTTCTTCTTCATCATCCATGGAGTTTCCTCCAGAAGGTTACAGAAGAGGCGTTGGGATTTGCCTTATCAATTCTTCTGGAAAAATTTTTGCAGCTTCGAGGTTGAACAGGCCTGAAATCTGGGAAATGCCTCAGGTAGTTTCTATTCCGTCATATTTTGAGCTTTATTCATTGGGAAACAGGAAAGGTGGTGTAAATGAAGGCGAAGATCTCAAAACTGCAGCCAAGAGAGAACTCATAGAAGAAACAGGAGTAGTTTCTGCAGAAATTATTGCAGAGCTACCCTACTGGCTTTCATACGATTTCTCGCCCGAAGTCAGCATCGGACTCAGCAAACACTGGGGAGTAATATACAAAGGCCAAACCCATAAGTGGTTTCTGATGAAGTTAACTGGAAAAGACGAAGAGATAAATCTTCTGGGTGATGGAACTGAAAGGCAAGAGTTTGGGGAGTGGTCATGGATGTCAATTGAACAGATACTGAACCAAGCTAACAAATCCCGGAAGCCTGTTTATGAACAAGTGATGAAGGAATTTGGTAACTTCATACTTGGAAATGGGGATGATGATATTTCTCTCAAGCAGAGTGAAACCCAATTAGTTAGCTGAAATGTTCAAATTCTGGTTTGGTAAGAAGATAATATATTTATCCATTGTACCACGATCATTGTAAGACTTATACCATACGAATCACAGTTTCATAGAAAATGGTGTATTTTCATATCTTTCATTATTCAAAATAAGAATGCCTTTATTTAAAGGTTTTGATAACTTTTGAGATAAGGCAGATATGTTTGATCCTTTTGGAATTTGGACGAGTGGTGGATTAATGTTCATATTTTTTGAAATCTAAGGCCAAGATATTGGAATCAGAACCATCACTAATTTGTGCAGCTGTAAAAGGATTTGAGTGTCCAAATACGAGATTGTAAATGATCTCCACGGGCTTGATTTTGACGCTCTTCTCGCCTTTTTACCTTTAAGGCCACGTTT

Coding sequence (CDS)

ATGGTCAGTTTGGGTATGTTTGGACCAAAATGCCCCTGTTATTTAATTAAATTCGCGTCAACGCCTAATTGGAAGGGGCTTCCGCTGTGTTCGTCTTCTTCTTCATCATCCATGGAGTTTCCTCCAGAAGGTTACAGAAGAGGCGTTGGGATTTGCCTTATCAATTCTTCTGGAAAAATTTTTGCAGCTTCGAGGTTGAACAGGCCTGAAATCTGGGAAATGCCTCAGGTAGTTTCTATTCCGTCATATTTTGAGCTTTATTCATTGGGAAACAGGAAAGGTGGTGTAAATGAAGGCGAAGATCTCAAAACTGCAGCCAAGAGAGAACTCATAGAAGAAACAGGAGTAGTTTCTGCAGAAATTATTGCAGAGCTACCCTACTGGCTTTCATACGATTTCTCGCCCGAAGTCAGCATCGGACTCAGCAAACACTGGGGAGTAATATACAAAGGCCAAACCCATAAGTGGTTTCTGATGAAGTTAACTGGAAAAGACGAAGAGATAAATCTTCTGGGTGATGGAACTGAAAGGCAAGAGTTTGGGGAGTGGTCATGGATGTCAATTGAACAGATACTGAACCAAGCTAACAAATCCCGGAAGCCTGTTTATGAACAAGTGATGAAGGAATTTGGTAACTTCATACTTGGAAATGGGGATGATGATATTTCTCTCAAGCAGAGTGAAACCCAATTAGTTAGCTGA

Protein sequence

MVSLGMFGPKCPCYLIKFASTPNWKGLPLCSSSSSSSMEFPPEGYRRGVGICLINSSGKIFAASRLNRPEIWEMPQVVSIPSYFELYSLGNRKGGVNEGEDLKTAAKRELIEETGVVSAEIIAELPYWLSYDFSPEVSIGLSKHWGVIYKGQTHKWFLMKLTGKDEEINLLGDGTERQEFGEWSWMSIEQILNQANKSRKPVYEQVMKEFGNFILGNGDDDISLKQSETQLVS
Homology
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BLAST of Lsi03G018260 vs. Swiss-Prot
Match: NUD26_ARATH (Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana GN=NUDT26 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.0e-55
Identity = 110/208 (52.88%), Postives = 135/208 (64.90%), Query Frame = 1 

Query: 12  PCYLIKFASTPNWKGLPLCSSSSSS-----SMEFPPEGYRRGVGICLINSSGKIFAASRL 71
           P   IKF+S P          SSSS     SME PPEGYRR VG+CL+NSS KIF ASRL
Sbjct: 25  PSKPIKFSSLPFLHRCRKSRVSSSSARCCSSMESPPEGYRRNVGVCLMNSSKKIFTASRL 84

Query: 72  NRPEIWEMPQVVSIPSYFELYSLGNRKGGVNEGEDLKTAAKRELIEETGVVSAEIIAELP 131
           + P  W+MPQ                 GG++EGED + A  REL EETGV SAEI+AE P
Sbjct: 85  DIPSAWQMPQ-----------------GGIDEGEDPRVAVMRELKEETGVHSAEILAEAP 144

Query: 132 YWLSYDFSPEVSIGLSKHWGVIYKGQTHKWFLMKLTGKDEEINLLGDGTERQEFGEWSWM 191
           +W++YDF P+V   L   WG  +KGQ  KWFL+K TGKDEEINLLGDGTE+ EFGEWSW 
Sbjct: 145 HWITYDFPPDVREKLKVRWGSDWKGQAQKWFLLKFTGKDEEINLLGDGTEKPEFGEWSWT 204

Query: 192 SIEQILNQANKSRKPVYEQVMKEFGNFI 215
           S +Q++  A + +KPVY++VM  F + +
Sbjct: 205 SPDQVVENAVEFKKPVYKEVMSAFASHL 215

[Close]
BLAST of Lsi03G018260 vs. Swiss-Prot
Match: NUD27_ARATH (Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana GN=NUDT27 PE=1 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.5e-49
Identity = 96/197 (48.73%), Postives = 126/197 (63.96%), Query Frame = 1 

Query: 27  LPLCSSSSSSSMEFPPEGYRRGVGICLINSSGKIFAASRLNRPEIWEMPQVVSIPSYFEL 86
           L +  SS + ++E PP GYR+ VGICL++   KIF AS+++ P+ W+MPQ          
Sbjct: 44  LSVALSSPARTVESPPVGYRKNVGICLVSPCRKIFTASKIHIPDTWQMPQ---------- 103

Query: 87  YSLGNRKGGVNEGEDLKTAAKRELIEETGVVSAEIIAELPYWLSYDFSPEVSIGLSKHWG 146
                  GG +EGEDL+ AA REL EETGV SAE IAE+P WL+YDF  EV   L++ W 
Sbjct: 104 -------GGADEGEDLRNAAFRELREETGVTSAEFIAEIPNWLTYDFPREVKDKLNRKWR 163

Query: 147 VIYKGQTHKWFLMKLTGKDEEINLLGDGTERQEFGEWSWMSIEQILNQANKSRKPVYEQV 206
             YKGQ  KWFL K TGK+EEINLLGDGT + EF  WSWM  EQ++  A   ++PVYE V
Sbjct: 164 TSYKGQAQKWFLFKFTGKEEEINLLGDGTAKPEFKVWSWMLPEQVIEHAVYFKRPVYEHV 223

Query: 207 MKEFGNFILGNGDDDIS 224
           +K+F  + +    D ++
Sbjct: 224 IKQFNPYFVDEEKDSMN 223

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BLAST of Lsi03G018260 vs. Swiss-Prot
Match: NUD25_ARATH (Nudix hydrolase 25 OS=Arabidopsis thaliana GN=NUDT25 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.3e-40
Identity = 83/183 (45.36%), Postives = 113/183 (61.75%), Query Frame = 1 

Query: 38  MEFPPEGYRRGVGICLINSSGKIFAASRLNRPEIWEMPQVVSIPSYFELYSLGNRKGGVN 97
           ME  P GYR  VG+CLINS   +F ASRLN P  W+MPQ                 GG+ 
Sbjct: 1   MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQ-----------------GGIE 60

Query: 98  EGEDLKTAAKRELIEETGVVSAEIIAELPYWLSYDFSPEVSIGLSKHWGVIYKGQTHKWF 157
           +GED K+AA REL EETGVVSAEI++E+P WL+YDF P V   +++ WG  + GQ  KW+
Sbjct: 61  DGEDPKSAAMRELQEETGVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWY 120

Query: 158 LMKLTGKDE--EINLLGDGTERQEFGEWSWMSIEQILNQANKSRKPVYEQVMKEFGNFIL 217
           L++L   ++  EINL  +  +  EF EW W   E+++ QA   ++P YE+V+K FG+F+ 
Sbjct: 121 LVRLRNDEDEKEINLANNEAD-SEFAEWKWAKPEEVVEQAVDYKRPTYEEVIKTFGSFLN 165

Query: 218 GNG 219
             G
Sbjct: 181 DTG 165

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BLAST of Lsi03G018260 vs. Swiss-Prot
Match: RPPH_RHORT (RNA pyrophosphohydrolase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) GN=rppH PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.9e-29
Identity = 66/169 (39.05%), Postives = 94/169 (55.62%), Query Frame = 1 

Query: 45  YRRGVGICLINSSGKIFAASRLNRPEIWEMPQVVSIPSYFELYSLGNRKGGVNEGEDLKT 104
           YR+GVGI LIN+ G++F A RL+ PE W+MPQ                 GG++ GED +T
Sbjct: 14  YRQGVGIMLINARGQVFVARRLDSPEAWQMPQ-----------------GGIDAGEDPET 73

Query: 105 AAKRELIEETGVVSAEIIAELPYWLSYDFSPEVSIGLSKHWGVIYKGQTHKWFLMKLTGK 164
           AA RE+ EE G  +A ++ E   WL YD   E+     + WG  ++GQ  KWF  + TG+
Sbjct: 74  AAWREMEEEIGTRNALLLGETAGWLGYDLPEELR---GRLWGGRFQGQRQKWFAFRFTGQ 133

Query: 165 DEEINLLGDGTERQEFGEWSWMSIEQILNQANKSRKPVYEQVMKEFGNF 214
           D +INL    T   EF  W W+ ++ ++      ++PVYEQV+ E   F
Sbjct: 134 DADINL---ATAHPEFDAWRWVDVDTLVALIVPFKRPVYEQVVAELAGF 159

[Close]
BLAST of Lsi03G018260 vs. Swiss-Prot
Match: RPPH_WOLPP (RNA pyrophosphohydrolase OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=rppH PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.6e-28
Identity = 65/173 (37.57%), Postives = 96/173 (55.49%), Query Frame = 1 

Query: 45  YRRGVGICLINSSGKIFAASRLNRPEIWEMPQVVSIPSYFELYSLGNRKGGVNEGEDLKT 104
           YR  VGI L N  G IF   R +    W+MP                 +GGV+EGE+L+ 
Sbjct: 8   YRPCVGIMLFNKQGNIFIGKRFDSDSYWQMP-----------------QGGVDEGEELEQ 67

Query: 105 AAKRELIEETGVVSAEIIAELPYWLSYDFSPEVSIGLSKHWGVIYKGQTHKWFLMKLTGK 164
           AA REL+EE G   AE++A+   W+ Y+   EV   +   W   Y GQ  +WFLMK  GK
Sbjct: 68  AALRELLEEVGTDEAEVVAQNKEWIYYNLPEEV---IPICWNGRYSGQKQRWFLMKFCGK 127

Query: 165 DEEINLLGDGTERQEFGEWSWMSIEQILNQANKSRKPVYEQVMKEFGNFILGN 218
           D++IN+  + T+  EF EW W +++ ++  A   +K VY++V++EF + I G+
Sbjct: 128 DKDINI--NYTDHPEFKEWRWQNVDDLVASAIPFKKEVYKKVIEEFSSIIKGS 158

[Close]
BLAST of Lsi03G018260 vs. TrEMBL
Match: A0A061FQV2_THECC (Nudix hydrolase OS=Theobroma cacao GN=TCM_044312 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.3e-57
Identity = 116/209 (55.50%), Postives = 143/209 (68.42%), Query Frame = 1 

Query: 7   FGPKCPCYLIKFASTPNWKGLPLCSSS-SSSSMEFPPEGYRRGVGICLINSSGKIFAASR 66
           F P+ PCY  KF +  N +  P C +  SSSSME PP+GYRR VGICLINSS KIF+ASR
Sbjct: 24  FFPEYPCYSCKFTNRRNPQ-TPFCRTCCSSSSMEAPPQGYRRNVGICLINSSKKIFSASR 83

Query: 67  LNRPEIWEMPQVVSIPSYFELYSLGNRKGGVNEGEDLKTAAKRELIEETGVVSAEIIAEL 126
           L+ P  W+MPQ                 GG+++ ED K AA REL EETGV SAE++AE 
Sbjct: 84  LDIPNAWQMPQ-----------------GGIDDNEDPKVAALRELKEETGVSSAEVLAEA 143

Query: 127 PYWLSYDFSPEVSIGLSKHWGVIYKGQTHKWFLMKLTGKDEEINLLGDGTERQEFGEWSW 186
           PYWL+YDF PEV   L   WG  +KGQ  KWFL+K TGK+EEINLLGDGTE+ EFGEWSW
Sbjct: 144 PYWLTYDFPPEVREKLKHQWGSDWKGQAQKWFLLKFTGKEEEINLLGDGTEKPEFGEWSW 203

Query: 187 MSIEQILNQANKSRKPVYEQVMKEFGNFI 215
           M+ EQI+  A   +KPVY++V++ F  ++
Sbjct: 204 MTPEQIVELAVDFKKPVYKKVLEVFAPYL 214

[Close]
BLAST of Lsi03G018260 vs. TrEMBL
Match: B9H9A4_POPTR (Diadenosine 5' family protein OS=Populus trichocarpa GN=POPTR_0006s22010g PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.1e-57
Identity = 121/233 (51.93%), Postives = 146/233 (62.66%), Query Frame = 1 

Query: 9   PKCPCYLIKFASTP----NWKGLPLCSSSSSS-------SMEFPPEGYRRGVGICLINSS 68
           P CP  L KFAS P    +   L L  S   S       SME PP+GYRR VGICL+NSS
Sbjct: 19  PNCPINLNKFASVPLSGSSCAALSLTRSRRRSRRRELPPSMETPPDGYRRNVGICLVNSS 78

Query: 69  GKIFAASRLNRPEIWEMPQVVSIPSYFELYSLGNRKGGVNEGEDLKTAAKRELIEETGVV 128
            KIF A R+N  + W+MPQ                 GG  EGEDL TAA REL EETGV 
Sbjct: 79  KKIFTALRINISDTWQMPQ-----------------GGAGEGEDLLTAAMRELREETGVT 138

Query: 129 SAEIIAELPYWLSYDFSPEVSIGLSKHWGVIYKGQTHKWFLMKLTGKDEEINLLGDGTER 188
           SAE +AE PYWL+YDF P+    LS+ WG  YKGQT KWFL K TGK++EINLLGDG+E 
Sbjct: 139 SAEFVAEAPYWLTYDFPPQTRERLSRRWGTNYKGQTQKWFLFKFTGKEDEINLLGDGSET 198

Query: 189 QEFGEWSWMSIEQILNQANKSRKPVYEQVMKEFGNFILGNGDDDISLKQSETQ 231
            EF +W+W+  E++L  A   +KPVYEQVMK FG ++  + D+D S  Q+ET+
Sbjct: 199 PEFKDWAWLLPERVLELAVDFKKPVYEQVMKVFGPYLQADADED-SAAQNETE 233

[Close]
BLAST of Lsi03G018260 vs. TrEMBL
Match: A0A118K4E1_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_014229 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.3e-55
Identity = 109/206 (52.91%), Postives = 145/206 (70.39%), Query Frame = 1 

Query: 9   PKCPCYLIKFASTPNWKGLPLCSSSSSSSMEFPPEGYRRGVGICLINSSGKIFAASRLNR 68
           PK   ++    + PN     + S+S SSSME PP GYR+ VGICLINSS KIF+ASRL+ 
Sbjct: 28  PKSNNFIQLPLTVPNRIRTSVNSASPSSSMEAPPAGYRKNVGICLINSSKKIFSASRLDI 87

Query: 69  PEIWEMPQVVSIPSYFELYSLGNRKGGVNEGEDLKTAAKRELIEETGVVSAEIIAELPYW 128
           P+ W+MPQ + +           ++GGV+EGED + AA REL EETGV SAEI+ E P+W
Sbjct: 88  PDSWQMPQYLILLM---------KQGGVDEGEDPRVAAIRELREETGVTSAEILMEAPHW 147

Query: 129 LSYDFSPEVSIGLSKHWGVIYKGQTHKWFLMKLTGKDEEINLLGDGTERQEFGEWSWMSI 188
           L+YDF P+V   L++ WG  +KGQ  KWFL K TGKDEEINLLGDG+E+ EFGEWSWMS 
Sbjct: 148 LTYDFPPQVKEKLNRQWGTDWKGQAQKWFLFKFTGKDEEINLLGDGSEKAEFGEWSWMSP 207

Query: 189 EQILNQANKSRKPVYEQVMKEFGNFI 215
           EQ++++A   +KPVY++++  F + +
Sbjct: 208 EQVIDRAVNFKKPVYKEIISVFSSHL 224

[Close]
BLAST of Lsi03G018260 vs. TrEMBL
Match: A0A0D2V0L7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G019900 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.7e-55
Identity = 109/185 (58.92%), Postives = 132/185 (71.35%), Query Frame = 1 

Query: 30  CSSSSSSSMEFPPEGYRRGVGICLINSSGKIFAASRLNRPEIWEMPQVVSIPSYFELYSL 89
           C+ SSSSSME PP+GYRR VGICLINSS KIF+ASRL+ P  W+MPQ             
Sbjct: 32  CTCSSSSSMEAPPQGYRRNVGICLINSSKKIFSASRLDIPSAWQMPQ------------- 91

Query: 90  GNRKGGVNEGEDLKTAAKRELIEETGVVSAEIIAELPYWLSYDFSPEVSIGLSKHWGVIY 149
               GG+++ ED K AA REL EETGV SAEI+AE+PYWL+YDF PEV   L   WG  +
Sbjct: 92  ----GGIDDNEDPKVAALRELKEETGVSSAEILAEVPYWLTYDFPPEVREKLKHQWGSDW 151

Query: 150 KGQTHKWFLMKLTGKDEEINLLGDGTERQEFGEWSWMSIEQILNQANKSRKPVYEQVMKE 209
           KGQ  KWFL+K TGK+EEINLLGDGTE+ EFGEWSWM+ EQI+  A   +KPVY +V++ 
Sbjct: 152 KGQAQKWFLLKFTGKEEEINLLGDGTEKPEFGEWSWMTPEQIVEHAVDFKKPVYNKVLEV 199

Query: 210 FGNFI 215
           F  ++
Sbjct: 212 FTPYL 199

[Close]
BLAST of Lsi03G018260 vs. TrEMBL
Match: D7L916_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_317863 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.7e-55
Identity = 107/185 (57.84%), Postives = 130/185 (70.27%), Query Frame = 1 

Query: 30  CSSSSSSSMEFPPEGYRRGVGICLINSSGKIFAASRLNRPEIWEMPQVVSIPSYFELYSL 89
           CSSSSSSSME PPEGYRR VG+CL+NSS KIF ASRL+ P  W+MPQ             
Sbjct: 54  CSSSSSSSMESPPEGYRRNVGVCLMNSSKKIFTASRLDIPSAWQMPQ------------- 113

Query: 90  GNRKGGVNEGEDLKTAAKRELIEETGVVSAEIIAELPYWLSYDFSPEVSIGLSKHWGVIY 149
               GG++EGED + A  REL EETGV SAEI+AE P+W++YDF P+V   L   WG  +
Sbjct: 114 ----GGIDEGEDPRVAVMRELKEETGVHSAEIVAEAPHWITYDFPPDVREKLKVRWGSDW 173

Query: 150 KGQTHKWFLMKLTGKDEEINLLGDGTERQEFGEWSWMSIEQILNQANKSRKPVYEQVMKE 209
           KGQ  KWFL+K TGKDEEINLLGDGTE+ EFGEWSW S +Q++  A   +KPVY++VM  
Sbjct: 174 KGQAQKWFLLKFTGKDEEINLLGDGTEKPEFGEWSWTSPDQVIEHAVDFKKPVYKEVMSA 221

Query: 210 FGNFI 215
           F + +
Sbjct: 234 FASHL 221

[Close]
BLAST of Lsi03G018260 vs. TAIR10
Match: AT3G10620.1 (AT3G10620.1 nudix hydrolase homolog 26)

HSP 1 Score: 215.3 bits (547), Expect = 4.0e-56
Identity = 110/208 (52.88%), Postives = 135/208 (64.90%), Query Frame = 1 

Query: 12  PCYLIKFASTPNWKGLPLCSSSSSS-----SMEFPPEGYRRGVGICLINSSGKIFAASRL 71
           P   IKF+S P          SSSS     SME PPEGYRR VG+CL+NSS KIF ASRL
Sbjct: 25  PSKPIKFSSLPFLHRCRKSRVSSSSARCCSSMESPPEGYRRNVGVCLMNSSKKIFTASRL 84

Query: 72  NRPEIWEMPQVVSIPSYFELYSLGNRKGGVNEGEDLKTAAKRELIEETGVVSAEIIAELP 131
           + P  W+MPQ                 GG++EGED + A  REL EETGV SAEI+AE P
Sbjct: 85  DIPSAWQMPQ-----------------GGIDEGEDPRVAVMRELKEETGVHSAEILAEAP 144

Query: 132 YWLSYDFSPEVSIGLSKHWGVIYKGQTHKWFLMKLTGKDEEINLLGDGTERQEFGEWSWM 191
           +W++YDF P+V   L   WG  +KGQ  KWFL+K TGKDEEINLLGDGTE+ EFGEWSW 
Sbjct: 145 HWITYDFPPDVREKLKVRWGSDWKGQAQKWFLLKFTGKDEEINLLGDGTEKPEFGEWSWT 204

Query: 192 SIEQILNQANKSRKPVYEQVMKEFGNFI 215
           S +Q++  A + +KPVY++VM  F + +
Sbjct: 205 SPDQVVENAVEFKKPVYKEVMSAFASHL 215

[Close]
BLAST of Lsi03G018260 vs. TAIR10
Match: AT5G06340.1 (AT5G06340.1 nudix hydrolase homolog 27)

HSP 1 Score: 197.6 bits (501), Expect = 8.5e-51
Identity = 96/197 (48.73%), Postives = 126/197 (63.96%), Query Frame = 1 

Query: 27  LPLCSSSSSSSMEFPPEGYRRGVGICLINSSGKIFAASRLNRPEIWEMPQVVSIPSYFEL 86
           L +  SS + ++E PP GYR+ VGICL++   KIF AS+++ P+ W+MPQ          
Sbjct: 44  LSVALSSPARTVESPPVGYRKNVGICLVSPCRKIFTASKIHIPDTWQMPQ---------- 103

Query: 87  YSLGNRKGGVNEGEDLKTAAKRELIEETGVVSAEIIAELPYWLSYDFSPEVSIGLSKHWG 146
                  GG +EGEDL+ AA REL EETGV SAE IAE+P WL+YDF  EV   L++ W 
Sbjct: 104 -------GGADEGEDLRNAAFRELREETGVTSAEFIAEIPNWLTYDFPREVKDKLNRKWR 163

Query: 147 VIYKGQTHKWFLMKLTGKDEEINLLGDGTERQEFGEWSWMSIEQILNQANKSRKPVYEQV 206
             YKGQ  KWFL K TGK+EEINLLGDGT + EF  WSWM  EQ++  A   ++PVYE V
Sbjct: 164 TSYKGQAQKWFLFKFTGKEEEINLLGDGTAKPEFKVWSWMLPEQVIEHAVYFKRPVYEHV 223

Query: 207 MKEFGNFILGNGDDDIS 224
           +K+F  + +    D ++
Sbjct: 224 IKQFNPYFVDEEKDSMN 223

[Close]
BLAST of Lsi03G018260 vs. TAIR10
Match: AT1G30110.1 (AT1G30110.1 nudix hydrolase homolog 25)

HSP 1 Score: 167.9 bits (424), Expect = 7.2e-42
Identity = 83/183 (45.36%), Postives = 113/183 (61.75%), Query Frame = 1 

Query: 38  MEFPPEGYRRGVGICLINSSGKIFAASRLNRPEIWEMPQVVSIPSYFELYSLGNRKGGVN 97
           ME  P GYR  VG+CLINS   +F ASRLN P  W+MPQ                 GG+ 
Sbjct: 1   MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQ-----------------GGIE 60

Query: 98  EGEDLKTAAKRELIEETGVVSAEIIAELPYWLSYDFSPEVSIGLSKHWGVIYKGQTHKWF 157
           +GED K+AA REL EETGVVSAEI++E+P WL+YDF P V   +++ WG  + GQ  KW+
Sbjct: 61  DGEDPKSAAMRELQEETGVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWY 120

Query: 158 LMKLTGKDE--EINLLGDGTERQEFGEWSWMSIEQILNQANKSRKPVYEQVMKEFGNFIL 217
           L++L   ++  EINL  +  +  EF EW W   E+++ QA   ++P YE+V+K FG+F+ 
Sbjct: 121 LVRLRNDEDEKEINLANNEAD-SEFAEWKWAKPEEVVEQAVDYKRPTYEEVIKTFGSFLN 165

Query: 218 GNG 219
             G
Sbjct: 181 DTG 165

[Close]
BLAST of Lsi03G018260 vs. NCBI nr
Match: gi|659085774|ref|XP_008443595.1| (PREDICTED: nudix hydrolase 26, chloroplastic-like, partial [Cucumis melo])

HSP 1 Score: 347.8 bits (891), Expect = 1.4e-92
Identity = 175/229 (76.42%), Postives = 184/229 (80.35%), Query Frame = 1 

Query: 1   MVSLGMFGPKCPCYLIKFASTPNWKGLPLCSSSSSSSMEFPPEGYRRGVGICLINSSGKI 60
           +VSLG+F PKCP +LIK +ST  W+G+         SMEFPPEGYRRGVGICL NSSGKI
Sbjct: 5   IVSLGVFRPKCPRHLIKSSSTHIWEGVVFSFVYHHPSMEFPPEGYRRGVGICLFNSSGKI 64

Query: 61  FAASRLNRPEIWEMPQVVSIPSYFELYSLGNRKGGVNEGEDLKTAAKRELIEETGVVSAE 120
           FAASRLN  EIWEMPQ                 GGVNEGEDLKTAAKREL+EETGVVSAE
Sbjct: 65  FAASRLNGHEIWEMPQ-----------------GGVNEGEDLKTAAKRELMEETGVVSAE 124

Query: 121 IIAELPYWLSYDFSPEVSIGLSKHWGVIYKGQTHKWFLMKLTGKDEEINLLGDGTERQEF 180
           IIAELPYWLSYDFSPEVSI   KHWG  YKGQTHKWFL+K TGKDEEINLLGDGTERQEF
Sbjct: 125 IIAELPYWLSYDFSPEVSIRHIKHWGARYKGQTHKWFLLKFTGKDEEINLLGDGTERQEF 184

Query: 181 GEWSWMSIEQILNQANKSRKPVYEQVMKEFGNFILGNGDDDISLKQSET 230
           GEWSWMSIEQ+LNQA KSRKPVYEQVMKEFGNFILG   DDI LKQSET
Sbjct: 185 GEWSWMSIEQLLNQAKKSRKPVYEQVMKEFGNFILGIVGDDIPLKQSET 216

[Close]
BLAST of Lsi03G018260 vs. NCBI nr
Match: gi|778684462|ref|XP_011652033.1| (PREDICTED: nudix hydrolase 26, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 316.6 bits (810), Expect = 3.6e-83
Identity = 158/195 (81.03%), Postives = 163/195 (83.59%), Query Frame = 1 

Query: 38  MEFPPEGYRRGVGICLINSSGKIFAASRLNRPEIWEMPQVVSIPSYFELYSLGNRKGGVN 97
           MEFPPEGYRRGVGICL+NSSGKIFAASR N  EIWEMPQ                 GGVN
Sbjct: 1   MEFPPEGYRRGVGICLLNSSGKIFAASRPNGHEIWEMPQ-----------------GGVN 60

Query: 98  EGEDLKTAAKRELIEETGVVSAEIIAELPYWLSYDFSPEVSIGLSKHWGVIYKGQTHKWF 157
           EGEDLKTAAKREL+EETGVVSAEIIAELPYWLSYDFSPEVSI   KHWGV YKGQTHKWF
Sbjct: 61  EGEDLKTAAKRELMEETGVVSAEIIAELPYWLSYDFSPEVSIRHIKHWGVRYKGQTHKWF 120

Query: 158 LMKLTGKDEEINLLGDGTERQEFGEWSWMSIEQILNQANKSRKPVYEQVMKEFGNFILGN 217
           LMK TGKDEEINLLGDGTERQEFG+WSWMSIEQ+LNQA KSRKPVYEQVMKEFGN ILG 
Sbjct: 121 LMKFTGKDEEINLLGDGTERQEFGKWSWMSIEQLLNQAKKSRKPVYEQVMKEFGNIILGI 178

Query: 218 GDDDISLKQSETQLV 233
             DD+S  QSETQLV
Sbjct: 181 VGDDLSPTQSETQLV 178

[Close]
BLAST of Lsi03G018260 vs. NCBI nr
Match: gi|645241878|ref|XP_008227286.1| (PREDICTED: nudix hydrolase 26, chloroplastic [Prunus mume])

HSP 1 Score: 231.5 bits (589), Expect = 1.5e-57
Identity = 120/215 (55.81%), Postives = 144/215 (66.98%), Query Frame = 1 

Query: 11  CPCYLIKFASTPNWKGLP------LCSSS-----SSSSMEFPPEGYRRGVGICLINSSGK 70
           CP  + KF+  P     P      LC+SS     SSSSME PP+GYRR VGICLIN S K
Sbjct: 34  CPPKITKFSHLPLLPPKPINHTRLLCTSSHTSSPSSSSMEAPPQGYRRNVGICLINDSKK 93

Query: 71  IFAASRLNRPEIWEMPQVVSIPSYFELYSLGNRKGGVNEGEDLKTAAKRELIEETGVVSA 130
           IFAASRL+ P  W+MPQ                 GG++E ED +TAA REL EETGV SA
Sbjct: 94  IFAASRLDIPNAWQMPQ-----------------GGIDEAEDPRTAAMRELREETGVNSA 153

Query: 131 EIIAELPYWLSYDFSPEVSIGLSKHWGVIYKGQTHKWFLMKLTGKDEEINLLGDGTERQE 190
           EI+AE+PYWLSYDF PEV   L + WG  +KGQ  KWFL+K TGKDEEINLLGDG+E+ E
Sbjct: 154 EILAEVPYWLSYDFPPEVRAKLQQQWGSDWKGQAQKWFLLKFTGKDEEINLLGDGSEKPE 213

Query: 191 FGEWSWMSIEQILNQANKSRKPVYEQVMKEFGNFI 215
           FGEWSWMS EQI++ A   +KPVY++V+  F  ++
Sbjct: 214 FGEWSWMSAEQIIDLAVDFKKPVYKEVLAVFAPYL 231

[Close]
BLAST of Lsi03G018260 vs. NCBI nr
Match: gi|590567268|ref|XP_007010468.1| (Nudix hydrolase [Theobroma cacao])

HSP 1 Score: 230.3 bits (586), Expect = 3.4e-57
Identity = 116/209 (55.50%), Postives = 143/209 (68.42%), Query Frame = 1 

Query: 7   FGPKCPCYLIKFASTPNWKGLPLCSSS-SSSSMEFPPEGYRRGVGICLINSSGKIFAASR 66
           F P+ PCY  KF +  N +  P C +  SSSSME PP+GYRR VGICLINSS KIF+ASR
Sbjct: 24  FFPEYPCYSCKFTNRRNPQ-TPFCRTCCSSSSMEAPPQGYRRNVGICLINSSKKIFSASR 83

Query: 67  LNRPEIWEMPQVVSIPSYFELYSLGNRKGGVNEGEDLKTAAKRELIEETGVVSAEIIAEL 126
           L+ P  W+MPQ                 GG+++ ED K AA REL EETGV SAE++AE 
Sbjct: 84  LDIPNAWQMPQ-----------------GGIDDNEDPKVAALRELKEETGVSSAEVLAEA 143

Query: 127 PYWLSYDFSPEVSIGLSKHWGVIYKGQTHKWFLMKLTGKDEEINLLGDGTERQEFGEWSW 186
           PYWL+YDF PEV   L   WG  +KGQ  KWFL+K TGK+EEINLLGDGTE+ EFGEWSW
Sbjct: 144 PYWLTYDFPPEVREKLKHQWGSDWKGQAQKWFLLKFTGKEEEINLLGDGTEKPEFGEWSW 203

Query: 187 MSIEQILNQANKSRKPVYEQVMKEFGNFI 215
           M+ EQI+  A   +KPVY++V++ F  ++
Sbjct: 204 MTPEQIVELAVDFKKPVYKKVLEVFAPYL 214

[Close]
BLAST of Lsi03G018260 vs. NCBI nr
Match: gi|224088083|ref|XP_002308318.1| (diadenosine 5' family protein [Populus trichocarpa])

HSP 1 Score: 229.9 bits (585), Expect = 4.4e-57
Identity = 121/233 (51.93%), Postives = 146/233 (62.66%), Query Frame = 1 

Query: 9   PKCPCYLIKFASTP----NWKGLPLCSSSSSS-------SMEFPPEGYRRGVGICLINSS 68
           P CP  L KFAS P    +   L L  S   S       SME PP+GYRR VGICL+NSS
Sbjct: 19  PNCPINLNKFASVPLSGSSCAALSLTRSRRRSRRRELPPSMETPPDGYRRNVGICLVNSS 78

Query: 69  GKIFAASRLNRPEIWEMPQVVSIPSYFELYSLGNRKGGVNEGEDLKTAAKRELIEETGVV 128
            KIF A R+N  + W+MPQ                 GG  EGEDL TAA REL EETGV 
Sbjct: 79  KKIFTALRINISDTWQMPQ-----------------GGAGEGEDLLTAAMRELREETGVT 138

Query: 129 SAEIIAELPYWLSYDFSPEVSIGLSKHWGVIYKGQTHKWFLMKLTGKDEEINLLGDGTER 188
           SAE +AE PYWL+YDF P+    LS+ WG  YKGQT KWFL K TGK++EINLLGDG+E 
Sbjct: 139 SAEFVAEAPYWLTYDFPPQTRERLSRRWGTNYKGQTQKWFLFKFTGKEDEINLLGDGSET 198

Query: 189 QEFGEWSWMSIEQILNQANKSRKPVYEQVMKEFGNFILGNGDDDISLKQSETQ 231
            EF +W+W+  E++L  A   +KPVYEQVMK FG ++  + D+D S  Q+ET+
Sbjct: 199 PEFKDWAWLLPERVLELAVDFKKPVYEQVMKVFGPYLQADADED-SAAQNETE 233

The following BLAST results are available for this feature:
BLAST of Lsi03G018260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NUD26_ARATH7.0e-5552.88Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana GN=NUDT26 PE=1 SV=1[more]
NUD27_ARATH1.5e-4948.73Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana GN=NUDT27 PE=1 SV=1[more]
NUD25_ARATH1.3e-4045.36Nudix hydrolase 25 OS=Arabidopsis thaliana GN=NUDT25 PE=1 SV=1[more]
RPPH_RHORT3.9e-2939.05RNA pyrophosphohydrolase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1... [more]
RPPH_WOLPP5.6e-2837.57RNA pyrophosphohydrolase OS=Wolbachia pipientis subsp. Culex pipiens (strain wPi... [more]
BLAST of Lsi03G018260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A061FQV2_THECC2.3e-5755.50Nudix hydrolase OS=Theobroma cacao GN=TCM_044312 PE=3 SV=1[more]
B9H9A4_POPTR3.1e-5751.93Diadenosine 5' family protein OS=Populus trichocarpa GN=POPTR_0006s22010g PE=3 S... [more]
A0A118K4E1_CYNCS1.3e-5552.91Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_014229 PE=4 ... [more]
A0A0D2V0L7_GOSRA1.7e-5558.92Uncharacterized protein OS=Gossypium raimondii GN=B456_012G019900 PE=3 SV=1[more]
D7L916_ARALL1.7e-5557.84Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA... [more]
BLAST of Lsi03G018260 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G10620.14.0e-5652.88 nudix hydrolase homolog 26[more]
AT5G06340.18.5e-5148.73 nudix hydrolase homolog 27[more]
AT1G30110.17.2e-4245.36 nudix hydrolase homolog 25[more]
BLAST of Lsi03G018260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659085774|ref|XP_008443595.1|1.4e-9276.42PREDICTED: nudix hydrolase 26, chloroplastic-like, partial [Cucumis melo][more]
gi|778684462|ref|XP_011652033.1|3.6e-8381.03PREDICTED: nudix hydrolase 26, chloroplastic-like [Cucumis sativus][more]
gi|645241878|ref|XP_008227286.1|1.5e-5755.81PREDICTED: nudix hydrolase 26, chloroplastic [Prunus mume][more]
gi|590567268|ref|XP_007010468.1|3.4e-5755.50Nudix hydrolase [Theobroma cacao][more]
gi|224088083|ref|XP_002308318.1|4.4e-5751.93diadenosine 5' family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR020084NUDIX_hydrolase_CS
IPR015797NUDIX_hydrolase-like_dom_sf
IPR000086NUDIX_hydrolase_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0006753 nucleoside phosphate metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity
molecular_function GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004551 nucleotide diphosphatase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G018260.1Lsi03G018260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000086NUDIX hydrolase domainPFAMPF00293NUDIXcoord: 45..205
score: 9.0
IPR000086NUDIX hydrolase domainPROFILEPS51462NUDIXcoord: 44..208
score: 17
IPR015797NUDIX hydrolase domain-likeGENE3DG3DSA:3.90.79.10coord: 45..199
score: 1.4
IPR015797NUDIX hydrolase domain-likeunknownSSF55811Nudixcoord: 39..212
score: 3.93
IPR020084NUDIX hydrolase, conserved sitePROSITEPS00893NUDIX_BOXcoord: 94..115
scor
NoneNo IPR availablePANTHERPTHR11839UDP/ADP-SUGAR PYROPHOSPHATASEcoord: 94..214
score: 1.4E-66coord: 33..76
score: 1.4
NoneNo IPR availablePANTHERPTHR11839:SF13NUDIX HYDROLASE 26, CHLOROPLASTICcoord: 94..214
score: 1.4E-66coord: 33..76
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi03G018260Csa3G781040Cucumber (Chinese Long) v2culsiB186
Lsi03G018260Cucsa.241780Cucumber (Gy14) v1cgylsiB402
Lsi03G018260CmaCh14G003540Cucurbita maxima (Rimu)cmalsiB242
Lsi03G018260CmaCh06G005210Cucurbita maxima (Rimu)cmalsiB754
Lsi03G018260CmoCh14G003520Cucurbita moschata (Rifu)cmolsiB230
Lsi03G018260Cla017633Watermelon (97103) v1lsiwmB240
Lsi03G018260MELO3C009535Melon (DHL92) v3.5.1lsimeB260
Lsi03G018260ClCG10G018380Watermelon (Charleston Gray)lsiwcgB219
Lsi03G018260MELO3C009535.2Melon (DHL92) v3.6.1lsimedB273
Lsi03G018260Cla97C10G201360Watermelon (97103) v2lsiwmbB218
Lsi03G018260Bhi11G001992Wax gourdlsiwgoB294
Lsi03G018260Cp4.1LG03g00590Cucurbita pepo (Zucchini)cpelsiB503
Lsi03G018260CsGy3G033050Cucumber (Gy14) v2cgyblsiB171
Lsi03G018260Carg03631Silver-seed gourdcarlsiB225
Lsi03G018260Carg16211Silver-seed gourdcarlsiB620
Lsi03G018260CsaV3_3G037900Cucumber (Chinese Long) v3cuclsiB207
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi03G018260Wild cucumber (PI 183967)cpilsiB455
Lsi03G018260Cucumber (Chinese Long) v2culsiB049
Lsi03G018260Cucumber (Chinese Long) v2culsiB448
Lsi03G018260Melon (DHL92) v3.5.1lsimeB264
Lsi03G018260Melon (DHL92) v3.5.1lsimeB274
Lsi03G018260Watermelon (Charleston Gray)lsiwcgB235
Lsi03G018260Watermelon (97103) v1lsiwmB272
Lsi03G018260Cucumber (Gy14) v2cgyblsiB414
Lsi03G018260Cucumber (Gy14) v2cgyblsiB410
Lsi03G018260Melon (DHL92) v3.6.1lsimedB277
Lsi03G018260Melon (DHL92) v3.6.1lsimedB287
Lsi03G018260Silver-seed gourdcarlsiB215
Lsi03G018260Silver-seed gourdcarlsiB378
Lsi03G018260Silver-seed gourdcarlsiB744
Lsi03G018260Cucumber (Chinese Long) v3cuclsiB203
Lsi03G018260Cucumber (Chinese Long) v3cuclsiB477
Lsi03G018260Cucumber (Chinese Long) v3cuclsiB474
Lsi03G018260Watermelon (97103) v2lsiwmbB228
Lsi03G018260Wax gourdlsiwgoB330
Lsi03G018260Wax gourdlsiwgoB333
Lsi03G018260Bottle gourd (USVL1VR-Ls)lsilsiB040
Lsi03G018260Bottle gourd (USVL1VR-Ls)lsilsiB070
Lsi03G018260Cucumber (Gy14) v1cgylsiB088
Lsi03G018260Cucumber (Gy14) v1cgylsiB311
Lsi03G018260Cucumber (Gy14) v1cgylsiB524
Lsi03G018260Cucurbita maxima (Rimu)cmalsiB522
Lsi03G018260Cucurbita maxima (Rimu)cmalsiB574
Lsi03G018260Cucurbita maxima (Rimu)cmalsiB609
Lsi03G018260Cucurbita maxima (Rimu)cmalsiB800
Lsi03G018260Cucurbita moschata (Rifu)cmolsiB507
Lsi03G018260Cucurbita moschata (Rifu)cmolsiB552
Lsi03G018260Cucurbita moschata (Rifu)cmolsiB597
Lsi03G018260Cucurbita moschata (Rifu)cmolsiB747
Lsi03G018260Cucurbita moschata (Rifu)cmolsiB787
Lsi03G018260Cucurbita pepo (Zucchini)cpelsiB062
Lsi03G018260Cucurbita pepo (Zucchini)cpelsiB243
Lsi03G018260Cucurbita pepo (Zucchini)cpelsiB707
Lsi03G018260Wild cucumber (PI 183967)cpilsiB049
Lsi03G018260Wild cucumber (PI 183967)cpilsiB184