BLAST of Lsi03G016970 vs. Swiss-Prot
Match:
PP429_ARATH (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1)
HSP 1 Score: 852.8 bits (2202), Expect = 2.3e-246
Identity = 405/586 (69.11%), Postives = 496/586 (84.64%), Query Frame = 1
Query: 24 LNQNSFE---QNYRQICNLLLSSTHSRSLVKGLQLHAHIVKFGLQTIPLVSHHLINLYSK 83
LN ++F NY QIC+LLLSS +RS +KGLQLH ++VK GL IPLV+++LIN YSK
Sbjct: 3 LNSSAFFVPCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSK 62
Query: 84 TQLPLFSLQVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVGIRPDDHIYPSA 143
+QLP S + F+++P+KSSTTWSS+IS FAQNE P ++LEF ++MM +RPDDH+ PSA
Sbjct: 63 SQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSA 122
Query: 144 TKACGFLCRCDVGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDARYVFDEMPERNV 203
TK+C L RCD+G+S+HCL +KTG++ DVFVGSSLVDMYAKCG I AR +FDEMP+RNV
Sbjct: 123 TKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNV 182
Query: 204 VSWSGMICGYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSSTLLELGKQIHGL 263
V+WSGM+ GYAQ+ E+ EAL LFK+AL E++ VND++FSSVI VC++STLLELG+QIHGL
Sbjct: 183 VTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGL 242
Query: 264 CLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRV 323
+K SFDSSSFVGS+L+SLYSKCGV EGAYQVF+E+P +NLG+WN+ML A AQH+HTQ+V
Sbjct: 243 SIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKV 302
Query: 324 FGLFEEMGIVGMKPNFISFLSILYACSHAGLVEKGREYFNLMRDYGIEPDAQHYASLVDL 383
LF+ M + GMKPNFI+FL++L ACSHAGLV++GR YF+ M++ IEP +HYASLVD+
Sbjct: 303 IELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDM 362
Query: 384 LGRAGKLREAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRVLELNSSSSGLH 443
LGRAG+L+EA+ VI MP+ PTESVWGALLT C +HK+TE+AAF AD+V EL SSG+H
Sbjct: 363 LGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMH 422
Query: 444 VLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWEEIY 503
+ LSNAYAA GR+E+AA+ RK+LRDRG KKETGLSWVEE NKVHTF AG+R H K +EIY
Sbjct: 423 ISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIY 482
Query: 504 QKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLITFPPGRPIRVM 563
+KL EL EEMEKAGY+ADTS+VLR VDG+EK++TIRYHSERLAIAFGLITFP RPIRVM
Sbjct: 483 EKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVM 542
Query: 564 KNLRVCGDCHEAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
KNLRVCGDCH AIKFMS C+ R++IVRDNNRFHRFEDGKCSC DYW
Sbjct: 543 KNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
BLAST of Lsi03G016970 vs. Swiss-Prot
Match:
PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=3 SV=1)
HSP 1 Score: 506.9 bits (1304), Expect = 3.0e-142
Identity = 251/595 (42.18%), Postives = 377/595 (63.36%), Query Frame = 1
Query: 12 STSTAIKPSQNPLNQNSFEQNYRQICNLLLSSTHSRSLVKGLQLHAHIVKFGLQTIPLVS 71
S ++ S N L + + R LL T + L++G +HAHI++ + ++
Sbjct: 39 SNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMG 98
Query: 72 HHLINLYSKTQLPLFSLQVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVGIR 131
+ L+N+Y+K + +VF++ P++ TW+++IS ++Q++ P AL FF +M+ G
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158
Query: 132 PDDHIYPSATKACGFLCRCDVGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDARYV 191
P++ S KA R G +H VK GF+ +V VGS+L+D+Y + G++ DA+ V
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218
Query: 192 FDEMPERNVVSWSGMICGYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSSTLL 251
FD + RN VSW+ +I G+A+ + +AL LF+ L + + F+++S+ CSS+ L
Sbjct: 219 FDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFL 278
Query: 252 ELGKQIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIAC 311
E GK +H +K +F G+ L+ +Y+K G I A ++FD + R++ WNS+L A
Sbjct: 279 EQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAY 338
Query: 312 AQHAHTQRVFGLFEEMGIVGMKPNFISFLSILYACSHAGLVEKGREYFNLMRDYGIEPDA 371
AQH + FEEM VG++PN ISFLS+L ACSH+GL+++G Y+ LM+ GI P+A
Sbjct: 339 AQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEA 398
Query: 372 QHYASLVDLLGRAGKLREAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRVLE 431
HY ++VDLLGRAG L A+ I+EMP++PT ++W ALL CR+HK+TE+ A+ A+ V E
Sbjct: 399 WHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFE 458
Query: 432 LNSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDR 491
L+ G HV+L N YA+ GR+ +AAR+RK +++ GVKKE SWVE N +H F A D
Sbjct: 459 LDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDE 518
Query: 492 SHAKWEEIYQKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLITF 551
H + EEI +K EE+ ++++ GYV DTS V+ VD +E+ ++YHSE++A+AF L+
Sbjct: 519 RHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNT 578
Query: 552 PPGRPIRVMKNLRVCGDCHEAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
PPG I + KN+RVCGDCH AIK SK GR +IVRD NRFH F+DG CSC DYW
Sbjct: 579 PPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
BLAST of Lsi03G016970 vs. Swiss-Prot
Match:
PP364_ARATH (Pentatricopeptide repeat-containing protein At5g04780 OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2)
HSP 1 Score: 483.0 bits (1242), Expect = 4.7e-135
Identity = 239/576 (41.49%), Postives = 350/576 (60.76%), Query Frame = 1
Query: 32 NYRQICNLLLSSTHSRSLVKGLQLHAHIVKFGLQTIPLVSHHLINLYSKTQLPLFSLQVF 91
N + +L + ++++ H I++ L+ + + LIN YSK + QVF
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 92 DEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVGIRPDDHIYPSATKACGFLCRCD 151
D +S +W+++I + +N AL+ F M N G + + S ACG C
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 152 VGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDARYVFDEMPERNVVSWSGMICGYA 211
K +HCL VKT + +++VG++L+D+YAKCG+I DA VF+ M +++ V+WS M+ GY
Sbjct: 180 ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV 239
Query: 212 QLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSSTLLELGKQIHGLCLKMSFDSSSF 271
Q EAL L+++A ++ N FT SSVI CS+ L GKQ+H + K F S+ F
Sbjct: 240 QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 299
Query: 272 VGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGIVG 331
V S+ + +Y+KCG + +Y +F E+ +NL LWN+++ A+HA + V LFE+M G
Sbjct: 300 VASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG 359
Query: 332 MKPNFISFLSILYACSHAGLVEKGREYFNLMRD-YGIEPDAQHYASLVDLLGRAGKLREA 391
M PN ++F S+L C H GLVE+GR +F LMR YG+ P+ HY+ +VD+LGRAG L EA
Sbjct: 360 MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419
Query: 392 VSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRVLELNSSSSGLHVLLSNAYAAA 451
+IK +P PT S+WG+LL CR++K+ E+A A+++ EL ++G HVLLSN YAA
Sbjct: 420 YELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAAN 479
Query: 452 GRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWEEIYQKLEELEEEM 511
++EE A+ RK+LRD VKK G SW++ +KVHTF+ G+ H + EI L+ L +
Sbjct: 480 KQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKF 539
Query: 512 EKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCH 571
K GY L V+ +K E + HSE+LA+ FGL+ P P+R+MKNLR+C DCH
Sbjct: 540 RKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCH 599
Query: 572 EAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
E +K S + R +IVRD NRFH F DG CSCGD+W
Sbjct: 600 EFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
BLAST of Lsi03G016970 vs. Swiss-Prot
Match:
PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1)
HSP 1 Score: 473.0 bits (1216), Expect = 4.9e-132
Identity = 231/522 (44.25%), Postives = 345/522 (66.09%), Query Frame = 1
Query: 89 QVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVGIRPDDHIYPSATKACGFLC 148
Q+FDE+P + TW++++S + QN A E F +M P+ + G++
Sbjct: 271 QLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM------PERNEVSWNAMLAGYVQ 330
Query: 149 --RCDVGKSIHCLVVKTGFEC-DVFVGSSLVDMYAKCGVIGDARYVFDEMPERNVVSWSG 208
R ++ K + ++ C +V ++++ YA+CG I +A+ +FD+MP+R+ VSW+
Sbjct: 331 GERMEMAKELFDVM-----PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAA 390
Query: 209 MICGYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSSTLLELGKQIHGLCLKMS 268
MI GY+Q S EAL LF Q E +N +FSS + C+ LELGKQ+HG +K
Sbjct: 391 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 450
Query: 269 FDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFE 328
+++ FVG+AL+ +Y KCG IE A +F E+ +++ WN+M+ ++H + FE
Sbjct: 451 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFE 510
Query: 329 EMGIVGMKPNFISFLSILYACSHAGLVEKGREYFNLM-RDYGIEPDAQHYASLVDLLGRA 388
M G+KP+ + +++L ACSH GLV+KGR+YF M +DYG+ P++QHYA +VDLLGRA
Sbjct: 511 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRA 570
Query: 389 GKLREAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRVLELNSSSSGLHVLLS 448
G L +A +++K MP +P ++WG LL R+H +TE+A AD++ + +SG++VLLS
Sbjct: 571 GLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLS 630
Query: 449 NAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWEEIYQKLE 508
N YA++GR+ + ++R +RD+GVKK G SW+E NK HTF+ GD H + +EI+ LE
Sbjct: 631 NLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLE 690
Query: 509 ELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLITFPPGRPIRVMKNLR 568
EL+ M+KAGYV+ TS VL V+ EEK +RYHSERLA+A+G++ GRPIRV+KNLR
Sbjct: 691 ELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLR 750
Query: 569 VCGDCHEAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
VC DCH AIK+M++ +GR++I+RDNNRFH F+DG CSCGDYW
Sbjct: 751 VCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
BLAST of Lsi03G016970 vs. Swiss-Prot
Match:
PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1)
HSP 1 Score: 465.3 bits (1196), Expect = 1.0e-129
Identity = 229/519 (44.12%), Postives = 329/519 (63.39%), Query Frame = 1
Query: 89 QVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVGIRPDDHIYPSATKACGFLC 148
+VF+ PRK +++++I+ +AQ+ AL R M ++PD S
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 149 RCDVGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDARYVFDEMPERNVVSWSGMIC 208
GK IH V++ G + DV++GSSLVDMYAK I D+ VF + R+ +SW+ ++
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 209 GYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSSTLLELGKQIHGLCLKMSFDS 268
GY Q EAL LF+Q + + FSSVI C+ L LGKQ+HG L+ F S
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS 376
Query: 269 SSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMG 328
+ F+ SAL+ +YSKCG I+ A ++FD + + W ++++ A H H LFEEM
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 329 IVGMKPNFISFLSILYACSHAGLVEKGREYFNLM-RDYGIEPDAQHYASLVDLLGRAGKL 388
G+KPN ++F+++L ACSH GLV++ YFN M + YG+ + +HYA++ DLLGRAGKL
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL 496
Query: 389 REAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRVLELNSSSSGLHVLLSNAY 448
EA + I +M ++PT SVW LL+ C +HK+ E+A VA+++ ++S + G +VL+ N Y
Sbjct: 497 EEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMY 556
Query: 449 AAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWEEIYQKLEELE 508
A+ GR++E A++R +R +G++K+ SW+E NK H F +GDRSH ++I + L+ +
Sbjct: 557 ASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVM 616
Query: 509 EEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCG 568
E+MEK GYVADTS VL VD E K E + HSERLA+AFG+I PG IRV KN+R+C
Sbjct: 617 EQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICT 676
Query: 569 DCHEAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
DCH AIKF+SK + R +IVRDN+RFH F G CSCGDYW
Sbjct: 677 DCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
BLAST of Lsi03G016970 vs. TrEMBL
Match:
A0A0A0LF65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G812190 PE=4 SV=1)
HSP 1 Score: 1129.4 bits (2920), Expect = 0.0e+00
Identity = 551/597 (92.29%), Postives = 578/597 (96.82%), Query Frame = 1
Query: 10 LLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSSTHSRSLVKGLQLHAHIVKFGLQTIPL 69
LLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLS T SRSL +GLQLHAHI+KFGLQTIPL
Sbjct: 2 LLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPL 61
Query: 70 VSHHLINLYSKTQLPLFSLQVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVG 129
VSH+LINLYSKTQLPLFSLQVFDE P+KSSTTWSSVISAFAQNEAPLLAL+FFRRM+N G
Sbjct: 62 VSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDG 121
Query: 130 IRPDDHIYPSATKACGFLCRCDVGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDAR 189
+RPDDHIYPSATKACGFL R DVGKS+HCL VKTG+ CDVFVGSSLVDMYAKCG IGDAR
Sbjct: 122 VRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDAR 181
Query: 190 YVFDEMPERNVVSWSGMICGYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSST 249
++FDEMPERNVVSWSGMI GYAQLD+ VEALTLFKQAL+ED+DVNDFTFSSVIRVCSSST
Sbjct: 182 HLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSST 241
Query: 250 LLELGKQIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI 309
LELGK IHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI
Sbjct: 242 FLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI 301
Query: 310 ACAQHAHTQRVFGLFEEMGIVGMKPNFISFLSILYACSHAGLVEKGREYFNLMRDYGIEP 369
ACAQHAHTQRVFGLFEEMG VGMKPNFISFLS+LYACSHAGLVEKGREYF+LMRDYGIEP
Sbjct: 302 ACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEP 361
Query: 370 DAQHYASLVDLLGRAGKLREAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRV 429
+ +HYASLVDLLGRAGKL+EAVSVIK+MPM+PTESVWGALLTGCRIHKDTEMAAFVADR+
Sbjct: 362 ETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRI 421
Query: 430 LELNSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 489
LE++SSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG
Sbjct: 422 LEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 481
Query: 490 DRSHAKWEEIYQKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLI 549
DRSHAKW EIY+KLEELEEEMEKAGYVADTSFVLRAVDGEEK+ETIRYHSERLAIAFGLI
Sbjct: 482 DRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLI 541
Query: 550 TFPPGRPIRVMKNLRVCGDCHEAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
TFPPGRPIRVMKNLRVCGDCH AIKFMSKC GR+LIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 542 TFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
BLAST of Lsi03G016970 vs. TrEMBL
Match:
F6HL10_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g08190 PE=4 SV=1)
HSP 1 Score: 970.3 bits (2507), Expect = 1.1e-279
Identity = 463/586 (79.01%), Postives = 523/586 (89.25%), Query Frame = 1
Query: 21 QNPLNQNSFEQNYRQICNLLLSSTHSRSLVKGLQLHAHIVKFGLQTIPLVSHHLINLYSK 80
QNPLNQ+S E NYR ICNLLLS THSRSL KGLQLH HIVK G TI LV HHLIN YSK
Sbjct: 66 QNPLNQSSVEHNYRNICNLLLSITHSRSLFKGLQLHGHIVKSGFLTIHLVCHHLINFYSK 125
Query: 81 TQLPLFSLQVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVGIRPDDHIYPSA 140
+QLP +S QVF+E P KSSTTWSSVISAFAQNE P LA++FFRRM++ G+RPDDHI+PSA
Sbjct: 126 SQLPHYSRQVFEETPVKSSTTWSSVISAFAQNELPSLAIDFFRRMLDNGVRPDDHIFPSA 185
Query: 141 TKACGFLCRCDVGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDARYVFDEMPERNV 200
TKACG L RCD+G+S+H VKTG++CDVFVGSS+VDMYAKCG IGDAR +FDEMP+RNV
Sbjct: 186 TKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDARKMFDEMPDRNV 245
Query: 201 VSWSGMICGYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSSTLLELGKQIHGL 260
VSWSGMI GY+Q+ E EAL LFKQAL+ED+DVNDFTFSSV+RVC +STLLELGKQIHGL
Sbjct: 246 VSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNSTLLELGKQIHGL 305
Query: 261 CLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRV 320
CLK S+DSSSFVGS+LISLYSKCGVIE AY VF EIP RNLG+WN+MLIACAQHAHT++
Sbjct: 306 CLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAMLIACAQHAHTEKA 365
Query: 321 FGLFEEMGIVGMKPNFISFLSILYACSHAGLVEKGREYFNLMRDYGIEPDAQHYASLVDL 380
F LF++M VGMKPNFI+FL +LYACSHAGLVEKG+ YF LM++YGIEP AQHYAS+VDL
Sbjct: 366 FDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELMKEYGIEPGAQHYASMVDL 425
Query: 381 LGRAGKLREAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRVLELNSSSSGLH 440
LGRAGKL++AVS+IK+MPM+PTESVWGALLTGCRIH DTE+A+FVADRV EL SSG+H
Sbjct: 426 LGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTELASFVADRVFELGPVSSGIH 485
Query: 441 VLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWEEIY 500
VL+SNAYAAAGRYEEAAR RKMLRD+GVKKETGLSWVEEGN++HTF AGDRSH ++IY
Sbjct: 486 VLVSNAYAAAGRYEEAARARKMLRDQGVKKETGLSWVEEGNRIHTFAAGDRSHPYTKDIY 545
Query: 501 QKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLITFPPGRPIRVM 560
+KLEEL EEME+AGY+ADTSFVL+ VDGEEK++TIRYHSERLAIAFGLI+FPP RPIRVM
Sbjct: 546 KKLEELGEEMERAGYIADTSFVLQEVDGEEKNQTIRYHSERLAIAFGLISFPPERPIRVM 605
Query: 561 KNLRVCGDCHEAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
KNLRVCGDCH AIKFMSKC GR +IVRDNNRFHRFEDG CSC DYW
Sbjct: 606 KNLRVCGDCHTAIKFMSKCCGRTIIVRDNNRFHRFEDGNCSCRDYW 651
BLAST of Lsi03G016970 vs. TrEMBL
Match:
A0A061EWZ6_THECC (Mitochondrial RNAediting factor 1 OS=Theobroma cacao GN=TCM_024750 PE=4 SV=1)
HSP 1 Score: 946.4 bits (2445), Expect = 1.7e-272
Identity = 453/586 (77.30%), Postives = 515/586 (87.88%), Query Frame = 1
Query: 21 QNPLNQNSFEQNYRQICNLLLSSTHSRSLVKGLQLHAHIVKFGLQTIPLVSHHLINLYSK 80
QNPLNQNSFEQNYR ICN+LLS THSRSL KGLQLHAHI+K GLQTIPL+SHHL+N YSK
Sbjct: 10 QNPLNQNSFEQNYRNICNVLLSLTHSRSLPKGLQLHAHIIKAGLQTIPLISHHLLNFYSK 69
Query: 81 TQLPLFSLQVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVGIRPDDHIYPSA 140
TQLPLFS Q+F E P +SSTTWSSVIS+FAQNE P LA+EFFR M+ I+PDDHI+PSA
Sbjct: 70 TQLPLFSRQIFFETPIRSSTTWSSVISSFAQNELPSLAIEFFREMLVNNIKPDDHIFPSA 129
Query: 141 TKACGFLCRCDVGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDARYVFDEMPERNV 200
TK+C L R D+G+SIHCL++KTG++ DVFV SSLVDMY KCG I AR VFDEMPERNV
Sbjct: 130 TKSCATLGRFDLGQSIHCLILKTGYDMDVFVASSLVDMYGKCGKINVARKVFDEMPERNV 189
Query: 201 VSWSGMICGYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSSTLLELGKQIHGL 260
VSW+GMI GYAQL E EAL LFKQAL +DVNDFTFSSV++VC++STLLELGKQ HGL
Sbjct: 190 VSWTGMIYGYAQLGEYEEALMLFKQALYRRLDVNDFTFSSVLQVCANSTLLELGKQTHGL 249
Query: 261 CLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRV 320
C K +++ SSFVGS+LISLYSKCGVIEGAY VFDE+ RNLG+WN+MLIACAQH+HT+R
Sbjct: 250 CFKTNYNLSSFVGSSLISLYSKCGVIEGAYLVFDEVCVRNLGMWNAMLIACAQHSHTERA 309
Query: 321 FGLFEEMGIVGMKPNFISFLSILYACSHAGLVEKGREYFNLMRDYGIEPDAQHYASLVDL 380
F LF++M VG+KPNFI+FL +LYACSHAGLVEKG+ YF LM++Y IEP QHYASLVDL
Sbjct: 310 FDLFKQMEGVGIKPNFITFLCVLYACSHAGLVEKGQHYFELMKEYKIEPGDQHYASLVDL 369
Query: 381 LGRAGKLREAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRVLELNSSSSGLH 440
LGRAGKL+EA+S+I+EMP+QPTESVWGA L GCRIH +TE+AA+ ADR+ +L SSGLH
Sbjct: 370 LGRAGKLQEALSIIREMPIQPTESVWGAFLMGCRIHGNTELAAYAADRIFDLGPVSSGLH 429
Query: 441 VLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWEEIY 500
VLLSNAYAAAGRYE+AA+ RKMLRD G+KKETGLSWVEEGNKVHTF AGDRSHAK +EIY
Sbjct: 430 VLLSNAYAAAGRYEDAAKARKMLRDLGIKKETGLSWVEEGNKVHTFAAGDRSHAKTKEIY 489
Query: 501 QKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLITFPPGRPIRVM 560
QKLE L EEME+ GYVADT FVLR VDGEEK++TIRYHSERLA+AFGLITFPP RPIRVM
Sbjct: 490 QKLEALGEEMEQVGYVADTRFVLREVDGEEKNQTIRYHSERLAVAFGLITFPPDRPIRVM 549
Query: 561 KNLRVCGDCHEAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
KNLR+CGDCH AIKFMSKCSGR++IVRDNNRFH FEDGKCSCGDYW
Sbjct: 550 KNLRICGDCHTAIKFMSKCSGRVIIVRDNNRFHHFEDGKCSCGDYW 595
BLAST of Lsi03G016970 vs. TrEMBL
Match:
A0A0D2MT91_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G038400 PE=4 SV=1)
HSP 1 Score: 946.0 bits (2444), Expect = 2.2e-272
Identity = 451/589 (76.57%), Postives = 521/589 (88.46%), Query Frame = 1
Query: 18 KPSQNPLNQNSFEQNYRQICNLLLSSTHSRSLVKGLQLHAHIVKFGLQTIPLVSHHLINL 77
+P NPLNQ SFEQNYR ICNLLLS TH+RSL KGLQLHAHI+K G+QTIPL+SHHLIN
Sbjct: 11 EPPLNPLNQLSFEQNYRNICNLLLSLTHTRSLPKGLQLHAHIIKSGIQTIPLISHHLINF 70
Query: 78 YSKTQLPLFSLQVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVGIRPDDHIY 137
YSKTQLPLFS QVF EA KS TTWSSVIS+FAQNE P LA++FFR M+ IRPDDHIY
Sbjct: 71 YSKTQLPLFSRQVFFEATHKSPTTWSSVISSFAQNEFPSLAIQFFRTMLVNNIRPDDHIY 130
Query: 138 PSATKACGFLCRCDVGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDARYVFDEMPE 197
PSATK+C L R D+G+SIHCLV+KTG++ DVFV SSLVDMY KCG I DAR +FDEMP+
Sbjct: 131 PSATKSCAILGRSDIGQSIHCLVLKTGYDRDVFVASSLVDMYGKCGKIKDARNLFDEMPQ 190
Query: 198 RNVVSWSGMICGYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSSTLLELGKQI 257
RNVVSWSGMI GYAQL E EALTLFKQAL E +DVNDFTFSSV++VC++STLL+LGKQI
Sbjct: 191 RNVVSWSGMIYGYAQLGEFEEALTLFKQALYERLDVNDFTFSSVVQVCANSTLLQLGKQI 250
Query: 258 HGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHT 317
HGLC K ++D SSFVGS+LISLYSKCGVI G+Y+VFDE +NLG+WN+MLIACAQH+ T
Sbjct: 251 HGLCFKTNYDISSFVGSSLISLYSKCGVIGGSYRVFDEACVKNLGMWNAMLIACAQHSQT 310
Query: 318 QRVFGLFEEMGIVGMKPNFISFLSILYACSHAGLVEKGREYFNLMRDYGIEPDAQHYASL 377
++VF LF++M +G+KPNFI+FL +LYACSHAGLVEKG+ YF LM++YGIEP QHYASL
Sbjct: 311 EKVFDLFKQMEGLGIKPNFITFLCVLYACSHAGLVEKGKHYFELMKEYGIEPGDQHYASL 370
Query: 378 VDLLGRAGKLREAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRVLELNSSSS 437
VDL GRAGKL+EA+S+I+EMP+QPTESVWGA LTGCR+H +TE+AA+ ADR+ EL SS
Sbjct: 371 VDLFGRAGKLQEALSIIREMPIQPTESVWGAFLTGCRLHGNTELAAYAADRIFELGPVSS 430
Query: 438 GLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWE 497
GLHVLLSNAYAAAGRYE+AA+ RKMLRDRG+KKETGLSWVEEGNKVHTF AGDRS+AK +
Sbjct: 431 GLHVLLSNAYAAAGRYEDAAKARKMLRDRGIKKETGLSWVEEGNKVHTFAAGDRSNAKTK 490
Query: 498 EIYQKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLITFPPGRPI 557
EIY+KLEEL +EME+AGY+ADTSFVLR V+GEEK++TIRYHSERLA+AFGLITFP RPI
Sbjct: 491 EIYRKLEELGDEMERAGYIADTSFVLREVNGEEKNQTIRYHSERLAVAFGLITFPSDRPI 550
Query: 558 RVMKNLRVCGDCHEAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
RVMKNLR+CGDCH AIKFMSKC+GR++IVRDNNRFH FEDGKCSCGDYW
Sbjct: 551 RVMKNLRICGDCHTAIKFMSKCTGRVIIVRDNNRFHHFEDGKCSCGDYW 599
BLAST of Lsi03G016970 vs. TrEMBL
Match:
A0A067JQ52_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21050 PE=4 SV=1)
HSP 1 Score: 936.0 bits (2418), Expect = 2.3e-269
Identity = 448/589 (76.06%), Postives = 511/589 (86.76%), Query Frame = 1
Query: 18 KPSQNPLNQNSFEQNYRQICNLLLSSTHSRSLVKGLQLHAHIVKFGLQTIPLVSHHLINL 77
KP QN LNQ SFE+ YR IC LLLS T SRSL+KG Q+HAHI+K LQ+IPLVSHHLIN
Sbjct: 49 KPPQN-LNQFSFEEKYRHICELLLSQTRSRSLLKGQQIHAHIIKSSLQSIPLVSHHLINF 108
Query: 78 YSKTQLPLFSLQVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVGIRPDDHIY 137
YSKTQLP+FSLQ F+EA KS+TTWSSVIS+ AQNE P LA+E+FR+M+ IRPDDHI+
Sbjct: 109 YSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIF 168
Query: 138 PSATKACGFLCRCDVGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDARYVFDEMPE 197
PSA KAC L RCD+GKSIH VVKTGF+ DVFVGSS VDMY KCG I +AR VFDEMPE
Sbjct: 169 PSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPE 228
Query: 198 RNVVSWSGMICGYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSSTLLELGKQI 257
RNVVSWSGMIC YA L E AL LFK+AL+ED+ VNDFTFSSVIRVC +STLLELG+QI
Sbjct: 229 RNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQI 288
Query: 258 HGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHT 317
HGLCLK S+DSSSFVGS+LISLYSKCGVIE A +VF+E P RNLG+WNSMLIACAQHAHT
Sbjct: 289 HGLCLKTSYDSSSFVGSSLISLYSKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHT 348
Query: 318 QRVFGLFEEMGIVGMKPNFISFLSILYACSHAGLVEKGREYFNLMRDYGIEPDAQHYASL 377
+ VF LF+ M VGM+PNFI+FL +LYACSH GL++KG++YF LM+DYGIEP AQHYA++
Sbjct: 349 EEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATM 408
Query: 378 VDLLGRAGKLREAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRVLELNSSSS 437
VDLLGRAGKL+EA+ +IK MP++PTESVWGA LTGCR+H D E+AAF ADR+ EL SS
Sbjct: 409 VDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSS 468
Query: 438 GLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWE 497
G++VLLSNAYAAAGRYE+AA+ RKMLRDRGVKKETGLSW+EEGN+VHTF AGDRSH K +
Sbjct: 469 GMNVLLSNAYAAAGRYEDAAKARKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKAK 528
Query: 498 EIYQKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLITFPPGRPI 557
EIY KLEELE++M K GYVADTSFVL+ VDGEEK +TIRYHSERLAIAFGLI FPP RPI
Sbjct: 529 EIYLKLEELEDDMGKVGYVADTSFVLQEVDGEEKRQTIRYHSERLAIAFGLIAFPPDRPI 588
Query: 558 RVMKNLRVCGDCHEAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
R+MKNLR+CGDCH AIKFMS+CSGR++IVRDNNRFHRFEDGKCSCGDYW
Sbjct: 589 RIMKNLRICGDCHTAIKFMSQCSGRVIIVRDNNRFHRFEDGKCSCGDYW 636
BLAST of Lsi03G016970 vs. TAIR10
Match:
AT5G52630.1 (AT5G52630.1 mitochondrial RNAediting factor 1)
HSP 1 Score: 852.8 bits (2202), Expect = 1.3e-247
Identity = 405/586 (69.11%), Postives = 496/586 (84.64%), Query Frame = 1
Query: 24 LNQNSFE---QNYRQICNLLLSSTHSRSLVKGLQLHAHIVKFGLQTIPLVSHHLINLYSK 83
LN ++F NY QIC+LLLSS +RS +KGLQLH ++VK GL IPLV+++LIN YSK
Sbjct: 3 LNSSAFFVPCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSK 62
Query: 84 TQLPLFSLQVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVGIRPDDHIYPSA 143
+QLP S + F+++P+KSSTTWSS+IS FAQNE P ++LEF ++MM +RPDDH+ PSA
Sbjct: 63 SQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSA 122
Query: 144 TKACGFLCRCDVGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDARYVFDEMPERNV 203
TK+C L RCD+G+S+HCL +KTG++ DVFVGSSLVDMYAKCG I AR +FDEMP+RNV
Sbjct: 123 TKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNV 182
Query: 204 VSWSGMICGYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSSTLLELGKQIHGL 263
V+WSGM+ GYAQ+ E+ EAL LFK+AL E++ VND++FSSVI VC++STLLELG+QIHGL
Sbjct: 183 VTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGL 242
Query: 264 CLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRV 323
+K SFDSSSFVGS+L+SLYSKCGV EGAYQVF+E+P +NLG+WN+ML A AQH+HTQ+V
Sbjct: 243 SIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKV 302
Query: 324 FGLFEEMGIVGMKPNFISFLSILYACSHAGLVEKGREYFNLMRDYGIEPDAQHYASLVDL 383
LF+ M + GMKPNFI+FL++L ACSHAGLV++GR YF+ M++ IEP +HYASLVD+
Sbjct: 303 IELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDM 362
Query: 384 LGRAGKLREAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRVLELNSSSSGLH 443
LGRAG+L+EA+ VI MP+ PTESVWGALLT C +HK+TE+AAF AD+V EL SSG+H
Sbjct: 363 LGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMH 422
Query: 444 VLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWEEIY 503
+ LSNAYAA GR+E+AA+ RK+LRDRG KKETGLSWVEE NKVHTF AG+R H K +EIY
Sbjct: 423 ISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIY 482
Query: 504 QKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLITFPPGRPIRVM 563
+KL EL EEMEKAGY+ADTS+VLR VDG+EK++TIRYHSERLAIAFGLITFP RPIRVM
Sbjct: 483 EKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVM 542
Query: 564 KNLRVCGDCHEAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
KNLRVCGDCH AIKFMS C+ R++IVRDNNRFHRFEDGKCSC DYW
Sbjct: 543 KNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
BLAST of Lsi03G016970 vs. TAIR10
Match:
AT3G24000.1 (AT3G24000.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 486.9 bits (1252), Expect = 1.8e-137
Identity = 244/586 (41.64%), Postives = 370/586 (63.14%), Query Frame = 1
Query: 12 STSTAIKPSQNPLNQNSFEQNYRQICNLLLSSTHSRSLVKGLQLHAHIVKFGLQTIPLVS 71
S ++ S N L + + R LL T + L++G +HAHI++ + ++
Sbjct: 39 SNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMG 98
Query: 72 HHLINLYSKTQLPLFSLQVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVGIR 131
+ L+N+Y+K + +VF++ P++ TW+++IS ++Q++ P AL FF +M+ G
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158
Query: 132 PDDHIYPSATKACGFLCRCDVGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDARYV 191
P++ S KA R G +H VK GF+ +V VGS+L+D+Y + G++ DA+ V
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218
Query: 192 FDEMPERNVVSWSGMICGYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSSTLL 251
FD + RN VSW+ +I G+A+ + +AL LF+ L + + F+++S+ CSS+ L
Sbjct: 219 FDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFL 278
Query: 252 ELGKQIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIAC 311
E GK +H +K +F G+ L+ +Y+K G I A ++FD + R++ WNS+L A
Sbjct: 279 EQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAY 338
Query: 312 AQHAHTQRVFGLFEEMGIVGMKPNFISFLSILYACSHAGLVEKGREYFNLMRDYGIEPDA 371
AQH + FEEM VG++PN ISFLS+L ACSH+GL+++G Y+ LM+ GI P+A
Sbjct: 339 AQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEA 398
Query: 372 QHYASLVDLLGRAGKLREAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRVLE 431
HY ++VDLLGRAG L A+ I+EMP++PT ++W ALL CR+HK+TE+ A+ A+ V E
Sbjct: 399 WHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFE 458
Query: 432 LNSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDR 491
L+ G HV+L N YA+ GR+ +AAR+RK +++ GVKKE SWVE N +H F A D
Sbjct: 459 LDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDE 518
Query: 492 SHAKWEEIYQKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLITF 551
H + EEI +K EE+ ++++ GYV DTS V+ VD +E+ ++YHSE++A+AF L+
Sbjct: 519 RHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNT 578
Query: 552 PPGRPIRVMKNLRVCGDCHEAIKFMSKCSGRILIVRDNNRFHRFED 598
PPG I + KN+RVCGDCH AIK SK GR +IVRD NRFH F+D
Sbjct: 579 PPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKD 624
BLAST of Lsi03G016970 vs. TAIR10
Match:
AT5G04780.1 (AT5G04780.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 483.0 bits (1242), Expect = 2.6e-136
Identity = 239/576 (41.49%), Postives = 350/576 (60.76%), Query Frame = 1
Query: 32 NYRQICNLLLSSTHSRSLVKGLQLHAHIVKFGLQTIPLVSHHLINLYSKTQLPLFSLQVF 91
N + +L + ++++ H I++ L+ + + LIN YSK + QVF
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 92 DEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVGIRPDDHIYPSATKACGFLCRCD 151
D +S +W+++I + +N AL+ F M N G + + S ACG C
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 152 VGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDARYVFDEMPERNVVSWSGMICGYA 211
K +HCL VKT + +++VG++L+D+YAKCG+I DA VF+ M +++ V+WS M+ GY
Sbjct: 180 ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV 239
Query: 212 QLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSSTLLELGKQIHGLCLKMSFDSSSF 271
Q EAL L+++A ++ N FT SSVI CS+ L GKQ+H + K F S+ F
Sbjct: 240 QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 299
Query: 272 VGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGIVG 331
V S+ + +Y+KCG + +Y +F E+ +NL LWN+++ A+HA + V LFE+M G
Sbjct: 300 VASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG 359
Query: 332 MKPNFISFLSILYACSHAGLVEKGREYFNLMRD-YGIEPDAQHYASLVDLLGRAGKLREA 391
M PN ++F S+L C H GLVE+GR +F LMR YG+ P+ HY+ +VD+LGRAG L EA
Sbjct: 360 MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419
Query: 392 VSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRVLELNSSSSGLHVLLSNAYAAA 451
+IK +P PT S+WG+LL CR++K+ E+A A+++ EL ++G HVLLSN YAA
Sbjct: 420 YELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAAN 479
Query: 452 GRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWEEIYQKLEELEEEM 511
++EE A+ RK+LRD VKK G SW++ +KVHTF+ G+ H + EI L+ L +
Sbjct: 480 KQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKF 539
Query: 512 EKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCH 571
K GY L V+ +K E + HSE+LA+ FGL+ P P+R+MKNLR+C DCH
Sbjct: 540 RKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCH 599
Query: 572 EAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
E +K S + R +IVRD NRFH F DG CSCGD+W
Sbjct: 600 EFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
BLAST of Lsi03G016970 vs. TAIR10
Match:
AT4G02750.1 (AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 473.0 bits (1216), Expect = 2.7e-133
Identity = 231/522 (44.25%), Postives = 345/522 (66.09%), Query Frame = 1
Query: 89 QVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVGIRPDDHIYPSATKACGFLC 148
Q+FDE+P + TW++++S + QN A E F +M P+ + G++
Sbjct: 271 QLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM------PERNEVSWNAMLAGYVQ 330
Query: 149 --RCDVGKSIHCLVVKTGFEC-DVFVGSSLVDMYAKCGVIGDARYVFDEMPERNVVSWSG 208
R ++ K + ++ C +V ++++ YA+CG I +A+ +FD+MP+R+ VSW+
Sbjct: 331 GERMEMAKELFDVM-----PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAA 390
Query: 209 MICGYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSSTLLELGKQIHGLCLKMS 268
MI GY+Q S EAL LF Q E +N +FSS + C+ LELGKQ+HG +K
Sbjct: 391 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 450
Query: 269 FDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFE 328
+++ FVG+AL+ +Y KCG IE A +F E+ +++ WN+M+ ++H + FE
Sbjct: 451 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFE 510
Query: 329 EMGIVGMKPNFISFLSILYACSHAGLVEKGREYFNLM-RDYGIEPDAQHYASLVDLLGRA 388
M G+KP+ + +++L ACSH GLV+KGR+YF M +DYG+ P++QHYA +VDLLGRA
Sbjct: 511 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRA 570
Query: 389 GKLREAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRVLELNSSSSGLHVLLS 448
G L +A +++K MP +P ++WG LL R+H +TE+A AD++ + +SG++VLLS
Sbjct: 571 GLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLS 630
Query: 449 NAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWEEIYQKLE 508
N YA++GR+ + ++R +RD+GVKK G SW+E NK HTF+ GD H + +EI+ LE
Sbjct: 631 NLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLE 690
Query: 509 ELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLITFPPGRPIRVMKNLR 568
EL+ M+KAGYV+ TS VL V+ EEK +RYHSERLA+A+G++ GRPIRV+KNLR
Sbjct: 691 ELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLR 750
Query: 569 VCGDCHEAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
VC DCH AIK+M++ +GR++I+RDNNRFH F+DG CSCGDYW
Sbjct: 751 VCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
BLAST of Lsi03G016970 vs. TAIR10
Match:
AT3G23330.1 (AT3G23330.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 465.3 bits (1196), Expect = 5.7e-131
Identity = 229/519 (44.12%), Postives = 329/519 (63.39%), Query Frame = 1
Query: 89 QVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVGIRPDDHIYPSATKACGFLC 148
+VF+ PRK +++++I+ +AQ+ AL R M ++PD S
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 149 RCDVGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDARYVFDEMPERNVVSWSGMIC 208
GK IH V++ G + DV++GSSLVDMYAK I D+ VF + R+ +SW+ ++
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 209 GYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSSTLLELGKQIHGLCLKMSFDS 268
GY Q EAL LF+Q + + FSSVI C+ L LGKQ+HG L+ F S
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS 376
Query: 269 SSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMG 328
+ F+ SAL+ +YSKCG I+ A ++FD + + W ++++ A H H LFEEM
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 329 IVGMKPNFISFLSILYACSHAGLVEKGREYFNLM-RDYGIEPDAQHYASLVDLLGRAGKL 388
G+KPN ++F+++L ACSH GLV++ YFN M + YG+ + +HYA++ DLLGRAGKL
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL 496
Query: 389 REAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRVLELNSSSSGLHVLLSNAY 448
EA + I +M ++PT SVW LL+ C +HK+ E+A VA+++ ++S + G +VL+ N Y
Sbjct: 497 EEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMY 556
Query: 449 AAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWEEIYQKLEELE 508
A+ GR++E A++R +R +G++K+ SW+E NK H F +GDRSH ++I + L+ +
Sbjct: 557 ASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVM 616
Query: 509 EEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCG 568
E+MEK GYVADTS VL VD E K E + HSERLA+AFG+I PG IRV KN+R+C
Sbjct: 617 EQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICT 676
Query: 569 DCHEAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
DCH AIKF+SK + R +IVRDN+RFH F G CSCGDYW
Sbjct: 677 DCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
BLAST of Lsi03G016970 vs. NCBI nr
Match:
gi|659084887|ref|XP_008443125.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Cucumis melo])
HSP 1 Score: 1129.8 bits (2921), Expect = 0.0e+00
Identity = 548/597 (91.79%), Postives = 578/597 (96.82%), Query Frame = 1
Query: 10 LLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSSTHSRSLVKGLQLHAHIVKFGLQTIPL 69
LL TSTAIKPSQ+PLNQNSF+QNY+QICNLLLS T SRSL +GLQLHAHI+KFGLQTIP+
Sbjct: 2 LLPTSTAIKPSQSPLNQNSFQQNYKQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPV 61
Query: 70 VSHHLINLYSKTQLPLFSLQVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVG 129
VSHHLINLYSK QLPL SLQVFDE P+KSSTTWSSVISAFAQNEAPLLAL+FFRRM+N G
Sbjct: 62 VSHHLINLYSKNQLPLLSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDG 121
Query: 130 IRPDDHIYPSATKACGFLCRCDVGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDAR 189
+RPDDHIYPSATKACGFLCRC+VGKS+HCL VKTG+ CDVFVGSSLVDMYAKCG IGDAR
Sbjct: 122 VRPDDHIYPSATKACGFLCRCEVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDAR 181
Query: 190 YVFDEMPERNVVSWSGMICGYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSST 249
++FDEMPERNVVSWSGMI GYAQLD+ VEALTLFKQAL+ED+DVNDFTFSSVIRVCSSST
Sbjct: 182 HLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSST 241
Query: 250 LLELGKQIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI 309
LLELGK IHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI
Sbjct: 242 LLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI 301
Query: 310 ACAQHAHTQRVFGLFEEMGIVGMKPNFISFLSILYACSHAGLVEKGREYFNLMRDYGIEP 369
ACAQHAHTQRVFGLFEEMG VGMKPNFISFLS+LYACSHAGLVEKGREYF+LMRDYGIEP
Sbjct: 302 ACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSLLYACSHAGLVEKGREYFSLMRDYGIEP 361
Query: 370 DAQHYASLVDLLGRAGKLREAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRV 429
+ +HYASLVDLLGRAGKL+EAVSVIK+MPM+PTESVWGALLTGCRIHKDTEMA+FVADRV
Sbjct: 362 ETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMASFVADRV 421
Query: 430 LELNSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 489
LE+NS+SSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG
Sbjct: 422 LEMNSTSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 481
Query: 490 DRSHAKWEEIYQKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLI 549
DRSHAKW EIY+KLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLI
Sbjct: 482 DRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLI 541
Query: 550 TFPPGRPIRVMKNLRVCGDCHEAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
TFPPGRPIRVMKNLRVCGDCH AIKFMSKC GR+LIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 542 TFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
BLAST of Lsi03G016970 vs. NCBI nr
Match:
gi|449437940|ref|XP_004136748.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Cucumis sativus])
HSP 1 Score: 1129.4 bits (2920), Expect = 0.0e+00
Identity = 551/597 (92.29%), Postives = 578/597 (96.82%), Query Frame = 1
Query: 10 LLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSSTHSRSLVKGLQLHAHIVKFGLQTIPL 69
LLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLS T SRSL +GLQLHAHI+KFGLQTIPL
Sbjct: 2 LLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPL 61
Query: 70 VSHHLINLYSKTQLPLFSLQVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVG 129
VSH+LINLYSKTQLPLFSLQVFDE P+KSSTTWSSVISAFAQNEAPLLAL+FFRRM+N G
Sbjct: 62 VSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDG 121
Query: 130 IRPDDHIYPSATKACGFLCRCDVGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDAR 189
+RPDDHIYPSATKACGFL R DVGKS+HCL VKTG+ CDVFVGSSLVDMYAKCG IGDAR
Sbjct: 122 VRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDAR 181
Query: 190 YVFDEMPERNVVSWSGMICGYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSST 249
++FDEMPERNVVSWSGMI GYAQLD+ VEALTLFKQAL+ED+DVNDFTFSSVIRVCSSST
Sbjct: 182 HLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSST 241
Query: 250 LLELGKQIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI 309
LELGK IHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI
Sbjct: 242 FLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI 301
Query: 310 ACAQHAHTQRVFGLFEEMGIVGMKPNFISFLSILYACSHAGLVEKGREYFNLMRDYGIEP 369
ACAQHAHTQRVFGLFEEMG VGMKPNFISFLS+LYACSHAGLVEKGREYF+LMRDYGIEP
Sbjct: 302 ACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEP 361
Query: 370 DAQHYASLVDLLGRAGKLREAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRV 429
+ +HYASLVDLLGRAGKL+EAVSVIK+MPM+PTESVWGALLTGCRIHKDTEMAAFVADR+
Sbjct: 362 ETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRI 421
Query: 430 LELNSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 489
LE++SSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG
Sbjct: 422 LEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 481
Query: 490 DRSHAKWEEIYQKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLI 549
DRSHAKW EIY+KLEELEEEMEKAGYVADTSFVLRAVDGEEK+ETIRYHSERLAIAFGLI
Sbjct: 482 DRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLI 541
Query: 550 TFPPGRPIRVMKNLRVCGDCHEAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
TFPPGRPIRVMKNLRVCGDCH AIKFMSKC GR+LIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 542 TFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
BLAST of Lsi03G016970 vs. NCBI nr
Match:
gi|1009161630|ref|XP_015899002.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Ziziphus jujuba])
HSP 1 Score: 968.8 bits (2503), Expect = 4.5e-279
Identity = 470/598 (78.60%), Postives = 528/598 (88.29%), Query Frame = 1
Query: 12 STSTAIKPSQNPLNQNSFEQNYRQICNLLLSSTHSRSLVKGLQLHAHIVKFGLQTIPLVS 71
STS++ +P QNPLNQ+SFEQNYR IC LLLS T SRS+ KGLQLHAHI+K G QTIPL+S
Sbjct: 26 STSSSPEPFQNPLNQHSFEQNYRHICYLLLSFTRSRSIPKGLQLHAHIIKSGFQTIPLLS 85
Query: 72 HHLINLYSKTQLPLFSLQVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVGIR 131
HHLIN YSK+QLPL S +VF E PRKSSTTWSSVIS+ AQNE PLLAL+FFR M+ G+R
Sbjct: 86 HHLINFYSKSQLPLCSCRVFHETPRKSSTTWSSVISSLAQNERPLLALDFFRGMLVDGLR 145
Query: 132 PDDHIYPSAT---KACGFLCRCDVGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDA 191
PDDHIYPSAT K+C L RCD+G+S+HCLVVKTG+E DVFVGSS+VDMYAKCG I DA
Sbjct: 146 PDDHIYPSATNATKSCAILGRCDIGQSLHCLVVKTGYEFDVFVGSSMVDMYAKCGEITDA 205
Query: 192 RYVFDEMPERNVVSWSGMICGYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSS 251
R +FDEMPE+NVVSWSGMI GYAQ+ E EAL LFK AL E+++VNDFTFSSVIRVC +S
Sbjct: 206 RRMFDEMPEKNVVSWSGMIYGYAQMGEDEEALRLFKLALTENLEVNDFTFSSVIRVCGNS 265
Query: 252 TLLELGKQIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 311
TLLELGKQIHGLC K SF+SSSFVGS+LISLYSKCGVIEGAY VF EIP +NLG+WN+ML
Sbjct: 266 TLLELGKQIHGLCFKTSFNSSSFVGSSLISLYSKCGVIEGAYGVFGEIPIKNLGMWNAML 325
Query: 312 IACAQHAHTQRVFGLFEEMGIVGMKPNFISFLSILYACSHAGLVEKGREYFNLMRDYGIE 371
IACAQHAHT + F LF++M VGMKPNFI+FL ILYACSHAGLVE+G+ YF M++YGIE
Sbjct: 326 IACAQHAHTDKAFDLFKQMECVGMKPNFITFLCILYACSHAGLVEEGKRYFEQMKEYGIE 385
Query: 372 PDAQHYASLVDLLGRAGKLREAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADR 431
P AQHYAS+VDLLGRAG L++A S+I EMP++PTESVWGALLTGCRIH DTE+AA VAD+
Sbjct: 386 PGAQHYASMVDLLGRAGNLQDAASIIDEMPIEPTESVWGALLTGCRIHGDTELAALVADK 445
Query: 432 VLELNSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 491
V E+ S SSGLHVLLSNAYAAAGR+EEAA+ RK LRD+GVKKETGLSWVE+GNK+HTF A
Sbjct: 446 VSEMGSVSSGLHVLLSNAYAAAGRWEEAAKARKALRDQGVKKETGLSWVEDGNKIHTFAA 505
Query: 492 GDRSHAKWEEIYQKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGL 551
GDR H K +EIYQKLEEL EEMEKAGYVADTSFVLR VDGEEK++TIRYHSERLAIAFGL
Sbjct: 506 GDRCHMKTKEIYQKLEELGEEMEKAGYVADTSFVLRKVDGEEKNQTIRYHSERLAIAFGL 565
Query: 552 ITFPPGRPIRVMKNLRVCGDCHEAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
ITFPP RPIRVMKNLRVCGDCH AIKFMSKCSGR++IVRDNNRFHRFEDGKCSCGDYW
Sbjct: 566 ITFPPERPIRVMKNLRVCGDCHTAIKFMSKCSGRVIIVRDNNRFHRFEDGKCSCGDYW 623
BLAST of Lsi03G016970 vs. NCBI nr
Match:
gi|731401537|ref|XP_010654317.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Vitis vinifera])
HSP 1 Score: 966.1 bits (2496), Expect = 2.9e-278
Identity = 462/585 (78.97%), Postives = 522/585 (89.23%), Query Frame = 1
Query: 21 QNPLNQNSFEQNYRQICNLLLSSTHSRSLVKGLQLHAHIVKFGLQTIPLVSHHLINLYSK 80
QNPLNQ+S E NYR ICNLLLS THSRSL KGLQLH HIVK G TI LV HHLIN YSK
Sbjct: 27 QNPLNQSSVEHNYRNICNLLLSITHSRSLFKGLQLHGHIVKSGFLTIHLVCHHLINFYSK 86
Query: 81 TQLPLFSLQVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVGIRPDDHIYPSA 140
+QLP +S QVF+E P KSSTTWSSVISAFAQNE P LA++FFRRM++ G+RPDDHI+PSA
Sbjct: 87 SQLPHYSRQVFEETPVKSSTTWSSVISAFAQNELPSLAIDFFRRMLDNGVRPDDHIFPSA 146
Query: 141 TKACGFLCRCDVGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDARYVFDEMPERNV 200
TKACG L RCD+G+S+H VKTG++CDVFVGSS+VDMYAKCG IGDAR +FDEMP+RNV
Sbjct: 147 TKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDARKMFDEMPDRNV 206
Query: 201 VSWSGMICGYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSSTLLELGKQIHGL 260
VSWSGMI GY+Q+ E EAL LFKQAL+ED+DVNDFTFSSV+RVC +STLLELGKQIHGL
Sbjct: 207 VSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNSTLLELGKQIHGL 266
Query: 261 CLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRV 320
CLK S+DSSSFVGS+LISLYSKCGVIE AY VF EIP RNLG+WN+MLIACAQHAHT++
Sbjct: 267 CLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAMLIACAQHAHTEKA 326
Query: 321 FGLFEEMGIVGMKPNFISFLSILYACSHAGLVEKGREYFNLMRDYGIEPDAQHYASLVDL 380
F LF++M VGMKPNFI+FL +LYACSHAGLVEKG+ YF LM++YGIEP AQHYAS+VDL
Sbjct: 327 FDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELMKEYGIEPGAQHYASMVDL 386
Query: 381 LGRAGKLREAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRVLELNSSSSGLH 440
LGRAGKL++AVS+IK+MPM+PTESVWGALLTGCRIH DTE+A+FVADRV EL SSG+H
Sbjct: 387 LGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTELASFVADRVFELGPVSSGIH 446
Query: 441 VLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWEEIY 500
VL+SNAYAAAGRYEEAAR RKMLRD+GVKKETGLSWVEEGN++HTF AGDRSH ++IY
Sbjct: 447 VLVSNAYAAAGRYEEAARARKMLRDQGVKKETGLSWVEEGNRIHTFAAGDRSHPYTKDIY 506
Query: 501 QKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLITFPPGRPIRVM 560
+KLEEL EEME+AGY+ADTSFVL+ VDGEEK++TIRYHSERLAIAFGLI+FPP RPIRVM
Sbjct: 507 KKLEELGEEMERAGYIADTSFVLQEVDGEEKNQTIRYHSERLAIAFGLISFPPERPIRVM 566
Query: 561 KNLRVCGDCHEAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDY 606
KNLRVCGDCH AIKFMSKC GR +IVRDNNRFHRFEDG CSC DY
Sbjct: 567 KNLRVCGDCHTAIKFMSKCCGRTIIVRDNNRFHRFEDGNCSCRDY 611
BLAST of Lsi03G016970 vs. NCBI nr
Match:
gi|658045422|ref|XP_008358389.1| (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At5g52630 [Malus domestica])
HSP 1 Score: 956.1 bits (2470), Expect = 3.0e-275
Identity = 454/589 (77.08%), Postives = 517/589 (87.78%), Query Frame = 1
Query: 18 KPSQNPLNQNSFEQNYRQICNLLLSSTHSRSLVKGLQLHAHIVKFGLQTIPLVSHHLINL 77
KP QNPLNQ SFEQNYR +CNLLLS THSRSL KGLQLH+H++K GLQTIPL+SHHLIN
Sbjct: 8 KPPQNPLNQQSFEQNYRDVCNLLLSLTHSRSLPKGLQLHSHVLKSGLQTIPLISHHLINF 67
Query: 78 YSKTQLPLFSLQVFDEAPRKSSTTWSSVISAFAQNEAPLLALEFFRRMMNVGIRPDDHIY 137
YSK QLPL S Q+F+EA RKSSTTWSSVIS+FAQNE P+LA+E+FRRM+ +RPDDHIY
Sbjct: 68 YSKNQLPLHSRQIFEEASRKSSTTWSSVISSFAQNEXPVLAIEYFRRMLGAQLRPDDHIY 127
Query: 138 PSATKACGFLCRCDVGKSIHCLVVKTGFECDVFVGSSLVDMYAKCGVIGDARYVFDEMPE 197
PS K+C L R DVG+S+HCL VKTG+E DVFVGSS+VDMYAKCG I DAR FDE+PE
Sbjct: 128 PSVAKSCAILNRLDVGQSVHCLAVKTGYEFDVFVGSSVVDMYAKCGEIRDARKXFDEIPE 187
Query: 198 RNVVSWSGMICGYAQLDESVEALTLFKQALVEDIDVNDFTFSSVIRVCSSSTLLELGKQI 257
+NVVSWSGMI GY QL + EAL LFKQA+VE++DVNDFTFSSVIRVC +STL ELG+QI
Sbjct: 188 KNVVSWSGMIYGYTQLGQXEEALRLFKQAMVENLDVNDFTFSSVIRVCGNSTLFELGRQI 247
Query: 258 HGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHT 317
HGLC K +FD SSFVGS+L+SLYSKCGVIEGAY+VFDEIP +NLG+WN+MLIA AQH HT
Sbjct: 248 HGLCFKTNFDLSSFVGSSLVSLYSKCGVIEGAYRVFDEIPVKNLGMWNAMLIASAQHVHT 307
Query: 318 QRVFGLFEEMGIVGMKPNFISFLSILYACSHAGLVEKGREYFNLMRDYGIEPDAQHYASL 377
LF++M GMKPNFI+FL +LYACSHAGLVEKG+ YF+LMR+YGIEP QHYA+L
Sbjct: 308 DNALDLFKQMESAGMKPNFITFLCVLYACSHAGLVEKGQYYFSLMREYGIEPGEQHYATL 367
Query: 378 VDLLGRAGKLREAVSVIKEMPMQPTESVWGALLTGCRIHKDTEMAAFVADRVLELNSSSS 437
VDLLGRAGKL+EAV +I EMP++PTES+WGALLTGCRIH DTE+AA VADRV EL SS
Sbjct: 368 VDLLGRAGKLQEAVKIIDEMPIEPTESIWGALLTGCRIHGDTELAASVADRVFELGPVSS 427
Query: 438 GLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWE 497
GLHVLLSNAYAAA R+EEAA++RKMLRDRGVKKETGLSWVEEGNK+HTF AGDR+H + +
Sbjct: 428 GLHVLLSNAYAAAQRFEEAAKVRKMLRDRGVKKETGLSWVEEGNKIHTFAAGDRTHMRTK 487
Query: 498 EIYQKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGLITFPPGRPI 557
EIY+KLEEL EEMEKAGYVADTSFVLR V+ EEK +TIRYHSERLA+AFGLITF P RPI
Sbjct: 488 EIYEKLEELGEEMEKAGYVADTSFVLREVNREEKDQTIRYHSERLAVAFGLITFLPDRPI 547
Query: 558 RVMKNLRVCGDCHEAIKFMSKCSGRILIVRDNNRFHRFEDGKCSCGDYW 607
R+MKNLR+CGDCH AIKFMSKCSGR++IVRDNNRFHRFEDGKC+CGDYW
Sbjct: 548 RIMKNLRICGDCHTAIKFMSKCSGRVIIVRDNNRFHRFEDGKCTCGDYW 596
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP429_ARATH | 2.3e-246 | 69.11 | Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis th... | [more] |
| PP252_ARATH | 3.0e-142 | 42.18 | Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... | [more] |
| PP364_ARATH | 4.7e-135 | 41.49 | Pentatricopeptide repeat-containing protein At5g04780 OS=Arabidopsis thaliana GN... | [more] |
| PP301_ARATH | 4.9e-132 | 44.25 | Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN... | [more] |
| PP251_ARATH | 1.0e-129 | 44.12 | Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LF65_CUCSA | 0.0e+00 | 92.29 | Uncharacterized protein OS=Cucumis sativus GN=Csa_3G812190 PE=4 SV=1 | [more] |
| F6HL10_VITVI | 1.1e-279 | 79.01 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g08190 PE=4 SV=... | [more] |
| A0A061EWZ6_THECC | 1.7e-272 | 77.30 | Mitochondrial RNAediting factor 1 OS=Theobroma cacao GN=TCM_024750 PE=4 SV=1 | [more] |
| A0A0D2MT91_GOSRA | 2.2e-272 | 76.57 | Uncharacterized protein OS=Gossypium raimondii GN=B456_004G038400 PE=4 SV=1 | [more] |
| A0A067JQ52_JATCU | 2.3e-269 | 76.06 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21050 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G52630.1 | 1.3e-247 | 69.11 | mitochondrial RNAediting factor 1 | [more] |
| AT3G24000.1 | 1.8e-137 | 41.64 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT5G04780.1 | 2.6e-136 | 41.49 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G02750.1 | 2.7e-133 | 44.25 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G23330.1 | 5.7e-131 | 44.12 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
