CsaV3_3G039270 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G039270
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr3 : 32254521 .. 32256317 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCTTTCAACTTCAACCGCCATTAAACCCTCACAAAACCCTCTCAATCAAAACAGCTTTGAACAAAACTACAGGCAAATTTGCAACCTTCTTCTGTCCTTTACCCGTTCCCGATCACTCCGTCAAGGCCTTCAGCTCCATGCCCACATTCTCAAATTCGGATTACAAACCATTCCTCTTGTTTCCCATAATCTAATCAACTTATACTCCAAAACCCAATTGCCACTTTTTTCTCTGCAGGTTTTTGATGAAACCCCCAAAAAATCTTCCACCACTTGGAGCTCTGTTATCTCTGCTTTTGCCCAAAATGAGGCCCCTTTGCTTGCTCTTCAGTTCTTTCGTCGAATGTTAAATGATGGGGTTCGTCCTGATGATCATATTTATCCCAGTGCCACTAAGGCTTGTGGGTTTTTGCGTAGGTCTGATGTTGGGAAATCTGTACATTGTCTTGCTGTGAAGACTGGATATTATTGTGATGTGTTTGTTGGAAGCTCGTTGGTGGATATGTATGCCAAATGTGGAGAGATTGGGGATGCACGTCATTTGTTTGACGAAATGCCTGAGAGGAATGTGGTGTCTTGGAGTGGGATGATTTATGGGTATGCTCAATTGGATGATGGTGTTGAGGCACTGACATTGTTCAAGCAAGCTTTGATTGAGGATGTTGATGTTAATGACTTCACATTCTCGAGTGTGATTCGTGTTTGTAGTAGCTCCACATTTCTTGAATTAGGGAAGCTGATTCATGGATTGTGCTTGAAGATGAGCTTTGATTCCTCGAGCTTTGTTGGAAGTGCTTTGATTTCTTTGTATTCCAAGTGTGGGGTTATTGAAGGGGCTTATCAAGTTTTTGATGAGATACCCACTAGAAATCTTGGCTTGTGGAATTCAATGCTGATAGCCTGCGCTCAACATGCTCATACACAGAGAGTGTTTGGTTTATTTGAAGAAATGGGAAATGTGGGGATGAAACCAAACTTTATTTCTTTTTTGTCTGTCCTCTATGCTTGTAGCCATGCGGGATTGGTTGAAAAGGGACGAGAATACTTCAGTCTAATGAGAGATTATGGGATTGAACCAGAAACTGAGCACTATGCCTCTTTAGTGGACTTGCTTGGGCGAGCTGGAAAGTTACAAGAAGCAGTTTCCGTGATCAAACAAATGCCAATGCGACCCACTGAATCTGTTTGGGGAGCTTTGTTAACAGGATGTAGAATCCATAAAGATACAGAAATGGCAGCTTTTGTGGCTGATAGAATATTAGAAATGGATAGTAGTAGCTCAGGTTTACACGTTTTGTTATCTAATGCATATGCTGCTGCTGGAAGATACGAAGAAGCAGCCCGGATGAGGAAAATGCTGCGAGACCGAGGCGTGAAGAAGGAGACTGGTTTGAGCTGGGTTGAGGAGGGAAACAAAGTTCACACATTCACTGCAGGTGATAGATCTCATGCTAAATGGGTAGAGATTTATGAGAAACTGGAAGAGTTGGAGGAGGAAATGGAGAAAGCTGGCTATGTTGCAGACACAAGTTTTGTGCTGCGGGCAGTCGACGGTGAGGAGAAAAACGAGACGATTCGATATCACAGTGAAAGATTAGCCATCGCATTTGGACTCATTACCTTCCCACCAGGAAGACCTATAAGAGTCATGAAGAATTTGCGTGTTTGTGGTGATTGTCATGCAGCTATAAAGTTCATGTCCAAGTGCTGTGGAAGGGTTCTCATTGTTCGAGACAACAACAGATTTCATAGGTTTGAGGATGGAAAATGCTCATGTGGTGATTATTGGTGA

mRNA sequence

ATGCTTCTTTCAACTTCAACCGCCATTAAACCCTCACAAAACCCTCTCAATCAAAACAGCTTTGAACAAAACTACAGGCAAATTTGCAACCTTCTTCTGTCCTTTACCCGTTCCCGATCACTCCGTCAAGGCCTTCAGCTCCATGCCCACATTCTCAAATTCGGATTACAAACCATTCCTCTTGTTTCCCATAATCTAATCAACTTATACTCCAAAACCCAATTGCCACTTTTTTCTCTGCAGGTTTTTGATGAAACCCCCAAAAAATCTTCCACCACTTGGAGCTCTGTTATCTCTGCTTTTGCCCAAAATGAGGCCCCTTTGCTTGCTCTTCAGTTCTTTCGTCGAATGTTAAATGATGGGGTTCGTCCTGATGATCATATTTATCCCAGTGCCACTAAGGCTTGTGGGTTTTTGCGTAGGTCTGATGTTGGGAAATCTGTACATTGTCTTGCTGTGAAGACTGGATATTATTGTGATGTGTTTGTTGGAAGCTCGTTGGTGGATATGTATGCCAAATGTGGAGAGATTGGGGATGCACGTCATTTGTTTGACGAAATGCCTGAGAGGAATGTGGTGTCTTGGAGTGGGATGATTTATGGGTATGCTCAATTGGATGATGGTGTTGAGGCACTGACATTGTTCAAGCAAGCTTTGATTGAGGATGTTGATGTTAATGACTTCACATTCTCGAGTGTGATTCGTGTTTGTAGTAGCTCCACATTTCTTGAATTAGGGAAGCTGATTCATGGATTGTGCTTGAAGATGAGCTTTGATTCCTCGAGCTTTGTTGGAAGTGCTTTGATTTCTTTGTATTCCAAGTGTGGGGTTATTGAAGGGGCTTATCAAGTTTTTGATGAGATACCCACTAGAAATCTTGGCTTGTGGAATTCAATGCTGATAGCCTGCGCTCAACATGCTCATACACAGAGAGTGTTTGGTTTATTTGAAGAAATGGGAAATGTGGGGATGAAACCAAACTTTATTTCTTTTTTGTCTGTCCTCTATGCTTGTAGCCATGCGGGATTGGTTGAAAAGGGACGAGAATACTTCAGTCTAATGAGAGATTATGGGATTGAACCAGAAACTGAGCACTATGCCTCTTTAGTGGACTTGCTTGGGCGAGCTGGAAAGTTACAAGAAGCAGTTTCCGTGATCAAACAAATGCCAATGCGACCCACTGAATCTGTTTGGGGAGCTTTGTTAACAGGATGTAGAATCCATAAAGATACAGAAATGGCAGCTTTTGTGGCTGATAGAATATTAGAAATGGATAGTAGTAGCTCAGGTTTACACGTTTTGTTATCTAATGCATATGCTGCTGCTGGAAGATACGAAGAAGCAGCCCGGATGAGGAAAATGCTGCGAGACCGAGGCGTGAAGAAGGAGACTGGTTTGAGCTGGGTTGAGGAGGGAAACAAAGTTCACACATTCACTGCAGGTGATAGATCTCATGCTAAATGGGTAGAGATTTATGAGAAACTGGAAGAGTTGGAGGAGGAAATGGAGAAAGCTGGCTATGTTGCAGACACAAGTTTTGTGCTGCGGGCAGTCGACGGTGAGGAGAAAAACGAGACGATTCGATATCACAGTGAAAGATTAGCCATCGCATTTGGACTCATTACCTTCCCACCAGGAAGACCTATAAGAGTCATGAAGAATTTGCGTGTTTGTGGTGATTGTCATGCAGCTATAAAGTTCATGTCCAAGTGCTGTGGAAGGGTTCTCATTGTTCGAGACAACAACAGATTTCATAGGTTTGAGGATGGAAAATGCTCATGTGGTGATTATTGGTGA

Coding sequence (CDS)

ATGCTTCTTTCAACTTCAACCGCCATTAAACCCTCACAAAACCCTCTCAATCAAAACAGCTTTGAACAAAACTACAGGCAAATTTGCAACCTTCTTCTGTCCTTTACCCGTTCCCGATCACTCCGTCAAGGCCTTCAGCTCCATGCCCACATTCTCAAATTCGGATTACAAACCATTCCTCTTGTTTCCCATAATCTAATCAACTTATACTCCAAAACCCAATTGCCACTTTTTTCTCTGCAGGTTTTTGATGAAACCCCCAAAAAATCTTCCACCACTTGGAGCTCTGTTATCTCTGCTTTTGCCCAAAATGAGGCCCCTTTGCTTGCTCTTCAGTTCTTTCGTCGAATGTTAAATGATGGGGTTCGTCCTGATGATCATATTTATCCCAGTGCCACTAAGGCTTGTGGGTTTTTGCGTAGGTCTGATGTTGGGAAATCTGTACATTGTCTTGCTGTGAAGACTGGATATTATTGTGATGTGTTTGTTGGAAGCTCGTTGGTGGATATGTATGCCAAATGTGGAGAGATTGGGGATGCACGTCATTTGTTTGACGAAATGCCTGAGAGGAATGTGGTGTCTTGGAGTGGGATGATTTATGGGTATGCTCAATTGGATGATGGTGTTGAGGCACTGACATTGTTCAAGCAAGCTTTGATTGAGGATGTTGATGTTAATGACTTCACATTCTCGAGTGTGATTCGTGTTTGTAGTAGCTCCACATTTCTTGAATTAGGGAAGCTGATTCATGGATTGTGCTTGAAGATGAGCTTTGATTCCTCGAGCTTTGTTGGAAGTGCTTTGATTTCTTTGTATTCCAAGTGTGGGGTTATTGAAGGGGCTTATCAAGTTTTTGATGAGATACCCACTAGAAATCTTGGCTTGTGGAATTCAATGCTGATAGCCTGCGCTCAACATGCTCATACACAGAGAGTGTTTGGTTTATTTGAAGAAATGGGAAATGTGGGGATGAAACCAAACTTTATTTCTTTTTTGTCTGTCCTCTATGCTTGTAGCCATGCGGGATTGGTTGAAAAGGGACGAGAATACTTCAGTCTAATGAGAGATTATGGGATTGAACCAGAAACTGAGCACTATGCCTCTTTAGTGGACTTGCTTGGGCGAGCTGGAAAGTTACAAGAAGCAGTTTCCGTGATCAAACAAATGCCAATGCGACCCACTGAATCTGTTTGGGGAGCTTTGTTAACAGGATGTAGAATCCATAAAGATACAGAAATGGCAGCTTTTGTGGCTGATAGAATATTAGAAATGGATAGTAGTAGCTCAGGTTTACACGTTTTGTTATCTAATGCATATGCTGCTGCTGGAAGATACGAAGAAGCAGCCCGGATGAGGAAAATGCTGCGAGACCGAGGCGTGAAGAAGGAGACTGGTTTGAGCTGGGTTGAGGAGGGAAACAAAGTTCACACATTCACTGCAGGTGATAGATCTCATGCTAAATGGGTAGAGATTTATGAGAAACTGGAAGAGTTGGAGGAGGAAATGGAGAAAGCTGGCTATGTTGCAGACACAAGTTTTGTGCTGCGGGCAGTCGACGGTGAGGAGAAAAACGAGACGATTCGATATCACAGTGAAAGATTAGCCATCGCATTTGGACTCATTACCTTCCCACCAGGAAGACCTATAAGAGTCATGAAGAATTTGCGTGTTTGTGGTGATTGTCATGCAGCTATAAAGTTCATGTCCAAGTGCTGTGGAAGGGTTCTCATTGTTCGAGACAACAACAGATTTCATAGGTTTGAGGATGGAAAATGCTCATGTGGTGATTATTGGTGA

Protein sequence

MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW
BLAST of CsaV3_3G039270 vs. NCBI nr
Match: XP_004136748.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Cucumis sativus] >KGN59347.1 hypothetical protein Csa_3G812190 [Cucumis sativus])

HSP 1 Score: 1213.4 bits (3138), Expect = 0.0e+00
Identity = 598/598 (100.00%), Postives = 598/598 (100.00%), Query Frame = 0

Query: 1   MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60
           MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP
Sbjct: 1   MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60

Query: 61  LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120
           LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND
Sbjct: 61  LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120

Query: 121 GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180
           GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA
Sbjct: 121 GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180

Query: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240
           RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS
Sbjct: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240

Query: 241 TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300
           TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML
Sbjct: 241 TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300

Query: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360
           IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE
Sbjct: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360

Query: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR 420
           PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR
Sbjct: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR 420

Query: 421 ILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480
           ILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA
Sbjct: 421 ILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480

Query: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGL 540
           GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGL
Sbjct: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGL 540

Query: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598

BLAST of CsaV3_3G039270 vs. NCBI nr
Match: XP_008443125.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Cucumis melo])

HSP 1 Score: 1145.2 bits (2961), Expect = 0.0e+00
Identity = 563/598 (94.15%), Postives = 575/598 (96.15%), Query Frame = 0

Query: 1   MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60
           MLL TSTAIKPSQ+PLNQNSF+QNY+QICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP
Sbjct: 1   MLLPTSTAIKPSQSPLNQNSFQQNYKQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60

Query: 61  LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120
           +VSH+LINLYSK QLPL SLQVFDETPKKSSTTWSSV                 RRMLND
Sbjct: 61  VVSHHLINLYSKNQLPLLSLQVFDETPKKSSTTWSSVXXXXXXXXXXXXXXXXXRRMLND 120

Query: 121 GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180
           GVRPDDHIYPSATKACGFL R +VGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA
Sbjct: 121 GVRPDDHIYPSATKACGFLCRCEVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180

Query: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240
           RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS
Sbjct: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240

Query: 241 TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300
           T LELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML
Sbjct: 241 TLLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300

Query: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360
           IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLS+LYACSHAGLVEKGREYFSLMRDYGIE
Sbjct: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSLLYACSHAGLVEKGREYFSLMRDYGIE 360

Query: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR 420
           PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMA+FVADR
Sbjct: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMASFVADR 420

Query: 421 ILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480
           +LEM+S+SSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA
Sbjct: 421 VLEMNSTSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480

Query: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGL 540
           GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEK+ETIRYHSERLAIAFGL
Sbjct: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGL 540

Query: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598

BLAST of CsaV3_3G039270 vs. NCBI nr
Match: XP_022934208.1 (putative pentatricopeptide repeat-containing protein At5g52630 [Cucurbita moschata])

HSP 1 Score: 1124.8 bits (2908), Expect = 0.0e+00
Identity = 547/597 (91.62%), Postives = 578/597 (96.82%), Query Frame = 0

Query: 2   LLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPL 61
           LLST+TAIKP QNPLNQNSFEQNYRQICNLLLSFT SRSL +GLQLHAHI+KFGLQTIPL
Sbjct: 10  LLSTATAIKPLQNPLNQNSFEQNYRQICNLLLSFTHSRSLAKGLQLHAHIVKFGLQTIPL 69

Query: 62  VSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDG 121
           VSH+LINLYSKTQLPLFSLQVF E P KSSTTWSSVISAFAQNEAPLLAL++FRRM+N G
Sbjct: 70  VSHHLINLYSKTQLPLFSLQVFTEAPTKSSTTWSSVISAFAQNEAPLLALEYFRRMVNVG 129

Query: 122 VRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDAR 181
           +RPDDHIYPSATKACGFL RSD+GKSVHCL VKTGY CDVFVGSSLVDMYAKCGEIGDAR
Sbjct: 130 IRPDDHIYPSATKACGFLCRSDLGKSVHCLVVKTGYDCDVFVGSSLVDMYAKCGEIGDAR 189

Query: 182 HLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSST 241
           H+FDEMPERNVVSWSGMI GYAQLD+  EALTLFKQAL+EDVDVNDFTFSSVIRVCS ST
Sbjct: 190 HVFDEMPERNVVSWSGMICGYAQLDESGEALTLFKQALVEDVDVNDFTFSSVIRVCSCST 249

Query: 242 FLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI 301
            LELGK IHGLCLKMSFDSSSFVGS+LISLYSKCGVIEGAYQVFDEIP RNLG+WNS+LI
Sbjct: 250 LLELGKQIHGLCLKMSFDSSSFVGSSLISLYSKCGVIEGAYQVFDEIPIRNLGMWNSLLI 309

Query: 302 ACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEP 361
           ACAQHAHT+RVFGLFEEMG+VGMKPNFISFLSVLYACSHAGLVE+GREYF+LMRDYGIEP
Sbjct: 310 ACAQHAHTERVFGLFEEMGSVGMKPNFISFLSVLYACSHAGLVERGREYFNLMRDYGIEP 369

Query: 362 ETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRI 421
           E +HYASLVDLLGRAGKLQEAVSVIKQMPM+PTESVWGALLTGCRIHKDTEMAAFVA+R+
Sbjct: 370 EAQHYASLVDLLGRAGKLQEAVSVIKQMPMQPTESVWGALLTGCRIHKDTEMAAFVAERV 429

Query: 422 LEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 481
           LE++S+SSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG
Sbjct: 430 LELNSTSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 489

Query: 482 DRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLI 541
           DRSHA+WVEIY+KLEELEEEMEKAGYVADTSFVLRAVDGEEK+ETIR+HSERLAIAFGLI
Sbjct: 490 DRSHARWVEIYQKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRFHSERLAIAFGLI 549

Query: 542 TFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           TFPPGRPIRVMKNLRVCGDCHAA+KFMSKC GRVLIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 550 TFPPGRPIRVMKNLRVCGDCHAAMKFMSKCTGRVLIVRDNNRFHRFEDGKCSCGDYW 606

BLAST of CsaV3_3G039270 vs. NCBI nr
Match: XP_023527262.1 (putative pentatricopeptide repeat-containing protein At5g52630 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1124.4 bits (2907), Expect = 0.0e+00
Identity = 548/597 (91.79%), Postives = 577/597 (96.65%), Query Frame = 0

Query: 2   LLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPL 61
           LLST+TAIKP QNPLNQNSFEQNYRQICN LLSFT SRSL +GLQLHAHI+KFGLQTIPL
Sbjct: 10  LLSTATAIKPLQNPLNQNSFEQNYRQICNHLLSFTHSRSLAKGLQLHAHIVKFGLQTIPL 69

Query: 62  VSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDG 121
           VSH+LINLYSKTQLPLFSLQVF E P KSSTTWSSVISAFAQNEAPLLAL++FRRM+N G
Sbjct: 70  VSHHLINLYSKTQLPLFSLQVFTEAPTKSSTTWSSVISAFAQNEAPLLALEYFRRMVNVG 129

Query: 122 VRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDAR 181
           +RPDDHIYPSATKACGFL RSD+GKSVHCL VKTGY CDVFVGSSLVDMYAKCGEIGDAR
Sbjct: 130 IRPDDHIYPSATKACGFLCRSDLGKSVHCLVVKTGYDCDVFVGSSLVDMYAKCGEIGDAR 189

Query: 182 HLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSST 241
           H+FDEMPERNVVSWSGMI GYAQLD+  EALTLFKQAL+EDVDVNDFTFSSVIRVCS ST
Sbjct: 190 HVFDEMPERNVVSWSGMICGYAQLDESGEALTLFKQALVEDVDVNDFTFSSVIRVCSCST 249

Query: 242 FLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI 301
            LELGK IHGLCLKMSFDSSSFVGS+LISLYSKCGVIEGAYQVFDEIP RNLG+WNS+LI
Sbjct: 250 LLELGKQIHGLCLKMSFDSSSFVGSSLISLYSKCGVIEGAYQVFDEIPIRNLGMWNSLLI 309

Query: 302 ACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEP 361
           ACAQHAHT+RVFGLFEEMG+VGMKPNFISFLSVLYACSHAGLVEKGREYF+LMRDYGIEP
Sbjct: 310 ACAQHAHTERVFGLFEEMGSVGMKPNFISFLSVLYACSHAGLVEKGREYFNLMRDYGIEP 369

Query: 362 ETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRI 421
           E +HYASLVDLLGRAGKLQEAVSVIKQMPM+PTESVWGALLTGCRIHKDTEMAAFVA+R+
Sbjct: 370 EAQHYASLVDLLGRAGKLQEAVSVIKQMPMQPTESVWGALLTGCRIHKDTEMAAFVAERV 429

Query: 422 LEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 481
           LE++S+SSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG
Sbjct: 430 LELNSTSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 489

Query: 482 DRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLI 541
           DRSHA+WVEIY+KLEELEEEMEKAGYVADTSFVLRAVDGEEK+ETIR+HSERLAIAFGLI
Sbjct: 490 DRSHARWVEIYQKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRFHSERLAIAFGLI 549

Query: 542 TFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           TFPPGRPIRVMKNLRVCGDCHAAIKFMSKC GRVLIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 550 TFPPGRPIRVMKNLRVCGDCHAAIKFMSKCTGRVLIVRDNNRFHRFEDGKCSCGDYW 606

BLAST of CsaV3_3G039270 vs. NCBI nr
Match: XP_022982889.1 (putative pentatricopeptide repeat-containing protein At5g52630 [Cucurbita maxima])

HSP 1 Score: 1120.5 bits (2897), Expect = 0.0e+00
Identity = 544/597 (91.12%), Postives = 576/597 (96.48%), Query Frame = 0

Query: 2   LLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPL 61
           LLST+TAIKP QNPLNQNSFEQNYRQICNLLLSFT SRSL +GLQLHAHI+KFGLQTIPL
Sbjct: 10  LLSTATAIKPLQNPLNQNSFEQNYRQICNLLLSFTHSRSLARGLQLHAHIVKFGLQTIPL 69

Query: 62  VSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDG 121
           VSH+LINLYSKTQLPLFSLQVF E P KSSTTWSSVISAFAQNEAPLLAL+FFRRM+N G
Sbjct: 70  VSHHLINLYSKTQLPLFSLQVFTEAPTKSSTTWSSVISAFAQNEAPLLALEFFRRMVNVG 129

Query: 122 VRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDAR 181
           +RPDDHIYPSATKACGFL RSD+GKSVHCL VKTGY CDVFVGSSLVDMYAKCGEIGDAR
Sbjct: 130 IRPDDHIYPSATKACGFLCRSDLGKSVHCLVVKTGYDCDVFVGSSLVDMYAKCGEIGDAR 189

Query: 182 HLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSST 241
           H+FDEMPERNVVSWSGMI GYAQLD+  EALTLFKQAL+EDVDVNDFTFSSVIRVCS ST
Sbjct: 190 HVFDEMPERNVVSWSGMICGYAQLDESSEALTLFKQALVEDVDVNDFTFSSVIRVCSCST 249

Query: 242 FLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI 301
            LELGK IHGLCLKMSFDSSSFVGS+LISLYSKCG+IEGAYQVFDEIP RNLG+WNS+LI
Sbjct: 250 LLELGKQIHGLCLKMSFDSSSFVGSSLISLYSKCGIIEGAYQVFDEIPIRNLGMWNSLLI 309

Query: 302 ACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEP 361
           ACAQHAHT+RVFGLFEEMG++GMKPNFISFLSVLYACSHAGLVEKGREYF+LMRDYGIEP
Sbjct: 310 ACAQHAHTERVFGLFEEMGSLGMKPNFISFLSVLYACSHAGLVEKGREYFNLMRDYGIEP 369

Query: 362 ETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRI 421
           E +HYASLVDLLGRAGKLQEAVSVIKQMPM+PTESVWGALLTGCRIHKDTEMAAFVA+R+
Sbjct: 370 EAQHYASLVDLLGRAGKLQEAVSVIKQMPMQPTESVWGALLTGCRIHKDTEMAAFVAERV 429

Query: 422 LEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 481
           LE++S+SSGLHVLLSNAYAAAGRYEEAARMRK+LRDRGVKKETGLSWVEEGNKVHTFTAG
Sbjct: 430 LELNSTSSGLHVLLSNAYAAAGRYEEAARMRKLLRDRGVKKETGLSWVEEGNKVHTFTAG 489

Query: 482 DRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLI 541
           DRSHA+WVEIY+KLEELEEEM +AGYVADTSFVLRAVDGEEK+ETIR+HSERLAI FGLI
Sbjct: 490 DRSHARWVEIYQKLEELEEEMAEAGYVADTSFVLRAVDGEEKSETIRFHSERLAIVFGLI 549

Query: 542 TFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           TFPPGRPIRVMKNLRVCGDCHAAIKFMSKC GRVLIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 550 TFPPGRPIRVMKNLRVCGDCHAAIKFMSKCTGRVLIVRDNNRFHRFEDGKCSCGDYW 606

BLAST of CsaV3_3G039270 vs. TAIR10
Match: AT5G52630.1 (mitochondrial RNAediting factor 1)

HSP 1 Score: 845.5 bits (2183), Expect = 2.0e-245
Identity = 405/586 (69.11%), Postives = 489/586 (83.45%), Query Frame = 0

Query: 16  LNQNSFE---QNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSK 75
           LN ++F     NY QIC+LLLS  R+RS  +GLQLH +++K GL  IPLV++NLIN YSK
Sbjct: 3   LNSSAFFVPCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSK 62

Query: 76  TQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSA 135
           +QLP  S + F+++P+KSSTTWSS+IS FAQNE P ++L+F ++M+   +RPDDH+ PSA
Sbjct: 63  SQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSA 122

Query: 136 TKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNV 195
           TK+C  L R D+G+SVHCL++KTGY  DVFVGSSLVDMYAKCGEI  AR +FDEMP+RNV
Sbjct: 123 TKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNV 182

Query: 196 VSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGL 255
           V+WSGM+YGYAQ+ +  EAL LFK+AL E++ VND++FSSVI VC++ST LELG+ IHGL
Sbjct: 183 VTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGL 242

Query: 256 CLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRV 315
            +K SFDSSSFVGS+L+SLYSKCGV EGAYQVF+E+P +NLG+WN+ML A AQH+HTQ+V
Sbjct: 243 SIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKV 302

Query: 316 FGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDL 375
             LF+ M   GMKPNFI+FL+VL ACSHAGLV++GR YF  M++  IEP  +HYASLVD+
Sbjct: 303 IELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDM 362

Query: 376 LGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLH 435
           LGRAG+LQEA+ VI  MP+ PTESVWGALLT C +HK+TE+AAF AD++ E+   SSG+H
Sbjct: 363 LGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMH 422

Query: 436 VLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIY 495
           + LSNAYAA GR+E+AA+ RK+LRDRG KKETGLSWVEE NKVHTF AG+R H K  EIY
Sbjct: 423 ISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIY 482

Query: 496 EKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVM 555
           EKL EL EEMEKAGY+ADTS+VLR VDG+EKN+TIRYHSERLAIAFGLITFP  RPIRVM
Sbjct: 483 EKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVM 542

Query: 556 KNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           KNLRVCGDCH AIKFMS C  RV+IVRDNNRFHRFEDGKCSC DYW
Sbjct: 543 KNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588

BLAST of CsaV3_3G039270 vs. TAIR10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 460.7 bits (1184), Expect = 1.4e-129
Identity = 248/608 (40.79%), Postives = 355/608 (58.39%), Query Frame = 0

Query: 30  NLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSK----------------- 89
           ++L S T    LR G  +H  I++ G+       + L+N+Y+K                 
Sbjct: 110 SVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEM 169

Query: 90  ---------------TQLPLFSL----QVFDETPKKSSTTWSSVISAFAQNEAPLLALQF 149
                          T +  F +    +VF+  P+K   +++++I+ +AQ+     AL+ 
Sbjct: 170 PQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRM 229

Query: 150 FRRMLNDGVRPDDHIYPSATKACGFLRRSDV--GKSVHCLAVKTGYYCDVFVGSSLVDMY 209
            R M    ++PD     S      F    DV  GK +H   ++ G   DV++GSSLVDMY
Sbjct: 230 VREMGTTDLKPDSFTLSSVLPI--FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMY 289

Query: 210 AKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFS 269
           AK   I D+  +F  +  R+ +SW+ ++ GY Q     EAL LF+Q +   V      FS
Sbjct: 290 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 349

Query: 270 SVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTR 329
           SVI  C+    L LGK +HG  L+  F S+ F+ SAL+ +YSKCG I+ A ++FD +   
Sbjct: 350 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 409

Query: 330 NLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYF 389
           +   W ++++  A H H      LFEEM   G+KPN ++F++VL ACSH GLV++   YF
Sbjct: 410 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF 469

Query: 390 -SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKD 449
            S+ + YG+  E EHYA++ DLLGRAGKL+EA + I +M + PT SVW  LL+ C +HK+
Sbjct: 470 NSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKN 529

Query: 450 TEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVE 509
            E+A  VA++I  +DS + G +VL+ N YA+ GR++E A++R  +R +G++K+   SW+E
Sbjct: 530 LELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIE 589

Query: 510 EGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYH 569
             NK H F +GDRSH    +I E L+ + E+MEK GYVADTS VL  VD E K E +  H
Sbjct: 590 MKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGH 649

Query: 570 SERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDG 599
           SERLA+AFG+I   PG  IRV KN+R+C DCH AIKF+SK   R +IVRDN+RFH F  G
Sbjct: 650 SERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRG 709

BLAST of CsaV3_3G039270 vs. TAIR10
Match: AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 459.9 bits (1182), Expect = 2.4e-129
Identity = 227/564 (40.25%), Postives = 350/564 (62.06%), Query Frame = 0

Query: 40  SLRQGL----QLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWS 99
           SL +GL    Q+H H +K    +   VS  LI+ YS+ +  +   ++  E        W+
Sbjct: 428 SLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRC-MKEAEILFERHNFDLVAWN 487

Query: 100 SVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKT 159
           ++++ + Q+      L+ F  M   G R DD    +  K CGFL   + GK VH  A+K+
Sbjct: 488 AMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS 547

Query: 160 GYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLF 219
           GY  D++V S ++DMY KCG++  A+  FD +P  + V+W+ MI G  +  +   A  +F
Sbjct: 548 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVF 607

Query: 220 KQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKC 279
            Q  +  V  ++FT +++ +  S  T LE G+ IH   LK++  +  FVG++L+ +Y+KC
Sbjct: 608 SQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKC 667

Query: 280 GVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVL 339
           G I+ AY +F  I   N+  WN+ML+  AQH   +    LF++M ++G+KP+ ++F+ VL
Sbjct: 668 GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVL 727

Query: 340 YACSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPT 399
            ACSH+GLV +  ++  S+  DYGI+PE EHY+ L D LGRAG +++A ++I+ M M  +
Sbjct: 728 SACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEAS 787

Query: 400 ESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKM 459
            S++  LL  CR+  DTE    VA ++LE++   S  +VLLSN YAAA +++E    R M
Sbjct: 788 ASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTM 847

Query: 460 LRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFV 519
           ++   VKK+ G SW+E  NK+H F   DRS+ +   IY K++++  ++++ GYV +T F 
Sbjct: 848 MKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFT 907

Query: 520 LRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGR 579
           L  V+ EEK   + YHSE+LA+AFGL++ PP  PIRV+KNLRVCGDCH A+K+++K   R
Sbjct: 908 LVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNR 967

Query: 580 VLIVRDNNRFHRFEDGKCSCGDYW 599
            +++RD NRFHRF+DG CSCGDYW
Sbjct: 968 EIVLRDANRFHRFKDGICSCGDYW 990

BLAST of CsaV3_3G039270 vs. TAIR10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 452.6 bits (1163), Expect = 3.8e-127
Identity = 222/562 (39.50%), Postives = 352/562 (62.63%), Query Frame = 0

Query: 38  SRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSV 97
           +R++ +G  +  H+   G + +  + + LIN+Y K  L   + Q+FD+ P+++  +W+++
Sbjct: 74  NRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTM 133

Query: 98  ISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGY 157
           ISA+++ +    AL+    ML D VRP+ + Y S  ++C  +  SDV + +HC  +K G 
Sbjct: 134 ISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM--SDV-RMLHCGIIKEGL 193

Query: 158 YCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQ 217
             DVFV S+L+D++AK GE  DA  +FDEM   + + W+ +I G+AQ      AL LFK+
Sbjct: 194 ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 253

Query: 218 ALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGV 277
                      T +SV+R C+    LELG   H   +K  +D    + +AL+ +Y KCG 
Sbjct: 254 MKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGS 313

Query: 278 IEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYA 337
           +E A +VF+++  R++  W++M+   AQ+ ++Q    LFE M + G KPN+I+ + VL+A
Sbjct: 314 LEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFA 373

Query: 338 CSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTES 397
           CSHAGL+E G  YF S+ + YGI+P  EHY  ++DLLG+AGKL +AV ++ +M   P   
Sbjct: 374 CSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAV 433

Query: 398 VWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLR 457
            W  LL  CR+ ++  +A + A +++ +D   +G + LLSN YA + +++    +R  +R
Sbjct: 434 TWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMR 493

Query: 458 DRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLR 517
           DRG+KKE G SW+E   ++H F  GD SH + VE+ +KL +L   +   GYV +T+FVL+
Sbjct: 494 DRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQ 553

Query: 518 AVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVL 577
            ++GE+  +++R+HSE+LA+AFGL+T P  + IR+ KNLR+CGDCH   K  SK   R +
Sbjct: 554 DLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSI 613

Query: 578 IVRDNNRFHRFEDGKCSCGDYW 599
           ++RD  R+H F+DGKCSCGDYW
Sbjct: 614 VIRDPIRYHHFQDGKCSCGDYW 630

BLAST of CsaV3_3G039270 vs. TAIR10
Match: AT4G14850.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 452.2 bits (1162), Expect = 4.9e-127
Identity = 237/585 (40.51%), Postives = 342/585 (58.46%), Query Frame = 0

Query: 17  NQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLP 76
           N  +F   ++ + +L L  T       G Q+HA  +K G      V  +  ++Y KT+L 
Sbjct: 107 NDFTFPCAFKAVASLRLPVT-------GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR 166

Query: 77  LFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKAC 136
             + ++FDE P+++  TW++ IS    +  P  A++ F         P+   + +   AC
Sbjct: 167 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 226

Query: 137 GFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWS 196
                 ++G  +H L +++G+  DV V + L+D Y KC +I  +  +F EM  +N VSW 
Sbjct: 227 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 286

Query: 197 GMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKM 256
            ++  Y Q  +  +A  L+ ++  + V+ +DF  SSV+  C+    LELG+ IH   +K 
Sbjct: 287 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 346

Query: 257 SFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLF 316
             + + FVGSAL+ +Y KCG IE + Q FDE+P +NL   NS++   A          LF
Sbjct: 347 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 406

Query: 317 EEMG--NVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRD-YGIEPETEHYASLVDLL 376
           EEM     G  PN+++F+S+L ACS AG VE G + F  MR  YGIEP  EHY+ +VD+L
Sbjct: 407 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 466

Query: 377 GRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHV 436
           GRAG ++ A   IK+MP++PT SVWGAL   CR+H   ++    A+ + ++D   SG HV
Sbjct: 467 GRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHV 526

Query: 437 LLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYE 496
           LLSN +AAAGR+ EA  +R+ L+  G+KK  G SW+   N+VH F A DRSH    EI  
Sbjct: 527 LLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQT 586

Query: 497 KLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMK 556
            L +L  EME AGY  D    L  ++ EEK   + +HSE+LA+AFGL++ P   PIR+ K
Sbjct: 587 TLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITK 646

Query: 557 NLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           NLR+CGDCH+  KF+S    R +IVRDNNRFHRF+DG CSC DYW
Sbjct: 647 NLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684

BLAST of CsaV3_3G039270 vs. Swiss-Prot
Match: sp|Q9LTF4|PP429_ARATH (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=3 SV=1)

HSP 1 Score: 845.5 bits (2183), Expect = 3.6e-244
Identity = 405/586 (69.11%), Postives = 489/586 (83.45%), Query Frame = 0

Query: 16  LNQNSFE---QNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSK 75
           LN ++F     NY QIC+LLLS  R+RS  +GLQLH +++K GL  IPLV++NLIN YSK
Sbjct: 3   LNSSAFFVPCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSK 62

Query: 76  TQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSA 135
           +QLP  S + F+++P+KSSTTWSS+IS FAQNE P ++L+F ++M+   +RPDDH+ PSA
Sbjct: 63  SQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSA 122

Query: 136 TKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNV 195
           TK+C  L R D+G+SVHCL++KTGY  DVFVGSSLVDMYAKCGEI  AR +FDEMP+RNV
Sbjct: 123 TKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNV 182

Query: 196 VSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGL 255
           V+WSGM+YGYAQ+ +  EAL LFK+AL E++ VND++FSSVI VC++ST LELG+ IHGL
Sbjct: 183 VTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGL 242

Query: 256 CLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRV 315
            +K SFDSSSFVGS+L+SLYSKCGV EGAYQVF+E+P +NLG+WN+ML A AQH+HTQ+V
Sbjct: 243 SIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKV 302

Query: 316 FGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDL 375
             LF+ M   GMKPNFI+FL+VL ACSHAGLV++GR YF  M++  IEP  +HYASLVD+
Sbjct: 303 IELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDM 362

Query: 376 LGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLH 435
           LGRAG+LQEA+ VI  MP+ PTESVWGALLT C +HK+TE+AAF AD++ E+   SSG+H
Sbjct: 363 LGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMH 422

Query: 436 VLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIY 495
           + LSNAYAA GR+E+AA+ RK+LRDRG KKETGLSWVEE NKVHTF AG+R H K  EIY
Sbjct: 423 ISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIY 482

Query: 496 EKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVM 555
           EKL EL EEMEKAGY+ADTS+VLR VDG+EKN+TIRYHSERLAIAFGLITFP  RPIRVM
Sbjct: 483 EKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVM 542

Query: 556 KNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           KNLRVCGDCH AIKFMS C  RV+IVRDNNRFHRFEDGKCSC DYW
Sbjct: 543 KNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588

BLAST of CsaV3_3G039270 vs. Swiss-Prot
Match: sp|Q9LW63|PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 2.5e-128
Identity = 248/608 (40.79%), Postives = 355/608 (58.39%), Query Frame = 0

Query: 30  NLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSK----------------- 89
           ++L S T    LR G  +H  I++ G+       + L+N+Y+K                 
Sbjct: 110 SVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEM 169

Query: 90  ---------------TQLPLFSL----QVFDETPKKSSTTWSSVISAFAQNEAPLLALQF 149
                          T +  F +    +VF+  P+K   +++++I+ +AQ+     AL+ 
Sbjct: 170 PQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRM 229

Query: 150 FRRMLNDGVRPDDHIYPSATKACGFLRRSDV--GKSVHCLAVKTGYYCDVFVGSSLVDMY 209
            R M    ++PD     S      F    DV  GK +H   ++ G   DV++GSSLVDMY
Sbjct: 230 VREMGTTDLKPDSFTLSSVLPI--FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMY 289

Query: 210 AKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFS 269
           AK   I D+  +F  +  R+ +SW+ ++ GY Q     EAL LF+Q +   V      FS
Sbjct: 290 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 349

Query: 270 SVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTR 329
           SVI  C+    L LGK +HG  L+  F S+ F+ SAL+ +YSKCG I+ A ++FD +   
Sbjct: 350 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 409

Query: 330 NLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYF 389
           +   W ++++  A H H      LFEEM   G+KPN ++F++VL ACSH GLV++   YF
Sbjct: 410 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF 469

Query: 390 -SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKD 449
            S+ + YG+  E EHYA++ DLLGRAGKL+EA + I +M + PT SVW  LL+ C +HK+
Sbjct: 470 NSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKN 529

Query: 450 TEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVE 509
            E+A  VA++I  +DS + G +VL+ N YA+ GR++E A++R  +R +G++K+   SW+E
Sbjct: 530 LELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIE 589

Query: 510 EGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYH 569
             NK H F +GDRSH    +I E L+ + E+MEK GYVADTS VL  VD E K E +  H
Sbjct: 590 MKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGH 649

Query: 570 SERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDG 599
           SERLA+AFG+I   PG  IRV KN+R+C DCH AIKF+SK   R +IVRDN+RFH F  G
Sbjct: 650 SERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRG 709

BLAST of CsaV3_3G039270 vs. Swiss-Prot
Match: sp|Q9SMZ2|PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 4.3e-128
Identity = 227/564 (40.25%), Postives = 350/564 (62.06%), Query Frame = 0

Query: 40  SLRQGL----QLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWS 99
           SL +GL    Q+H H +K    +   VS  LI+ YS+ +  +   ++  E        W+
Sbjct: 428 SLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRC-MKEAEILFERHNFDLVAWN 487

Query: 100 SVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKT 159
           ++++ + Q+      L+ F  M   G R DD    +  K CGFL   + GK VH  A+K+
Sbjct: 488 AMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS 547

Query: 160 GYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLF 219
           GY  D++V S ++DMY KCG++  A+  FD +P  + V+W+ MI G  +  +   A  +F
Sbjct: 548 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVF 607

Query: 220 KQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKC 279
            Q  +  V  ++FT +++ +  S  T LE G+ IH   LK++  +  FVG++L+ +Y+KC
Sbjct: 608 SQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKC 667

Query: 280 GVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVL 339
           G I+ AY +F  I   N+  WN+ML+  AQH   +    LF++M ++G+KP+ ++F+ VL
Sbjct: 668 GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVL 727

Query: 340 YACSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPT 399
            ACSH+GLV +  ++  S+  DYGI+PE EHY+ L D LGRAG +++A ++I+ M M  +
Sbjct: 728 SACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEAS 787

Query: 400 ESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKM 459
            S++  LL  CR+  DTE    VA ++LE++   S  +VLLSN YAAA +++E    R M
Sbjct: 788 ASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTM 847

Query: 460 LRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFV 519
           ++   VKK+ G SW+E  NK+H F   DRS+ +   IY K++++  ++++ GYV +T F 
Sbjct: 848 MKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFT 907

Query: 520 LRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGR 579
           L  V+ EEK   + YHSE+LA+AFGL++ PP  PIRV+KNLRVCGDCH A+K+++K   R
Sbjct: 908 LVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNR 967

Query: 580 VLIVRDNNRFHRFEDGKCSCGDYW 599
            +++RD NRFHRF+DG CSCGDYW
Sbjct: 968 EIVLRDANRFHRFKDGICSCGDYW 990

BLAST of CsaV3_3G039270 vs. Swiss-Prot
Match: sp|Q9SI53|PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 6.8e-126
Identity = 222/562 (39.50%), Postives = 352/562 (62.63%), Query Frame = 0

Query: 38  SRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSV 97
           +R++ +G  +  H+   G + +  + + LIN+Y K  L   + Q+FD+ P+++  +W+++
Sbjct: 74  NRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTM 133

Query: 98  ISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGY 157
           ISA+++ +    AL+    ML D VRP+ + Y S  ++C  +  SDV + +HC  +K G 
Sbjct: 134 ISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM--SDV-RMLHCGIIKEGL 193

Query: 158 YCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQ 217
             DVFV S+L+D++AK GE  DA  +FDEM   + + W+ +I G+AQ      AL LFK+
Sbjct: 194 ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 253

Query: 218 ALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGV 277
                      T +SV+R C+    LELG   H   +K  +D    + +AL+ +Y KCG 
Sbjct: 254 MKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGS 313

Query: 278 IEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYA 337
           +E A +VF+++  R++  W++M+   AQ+ ++Q    LFE M + G KPN+I+ + VL+A
Sbjct: 314 LEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFA 373

Query: 338 CSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTES 397
           CSHAGL+E G  YF S+ + YGI+P  EHY  ++DLLG+AGKL +AV ++ +M   P   
Sbjct: 374 CSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAV 433

Query: 398 VWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLR 457
            W  LL  CR+ ++  +A + A +++ +D   +G + LLSN YA + +++    +R  +R
Sbjct: 434 TWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMR 493

Query: 458 DRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLR 517
           DRG+KKE G SW+E   ++H F  GD SH + VE+ +KL +L   +   GYV +T+FVL+
Sbjct: 494 DRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQ 553

Query: 518 AVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVL 577
            ++GE+  +++R+HSE+LA+AFGL+T P  + IR+ KNLR+CGDCH   K  SK   R +
Sbjct: 554 DLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSI 613

Query: 578 IVRDNNRFHRFEDGKCSCGDYW 599
           ++RD  R+H F+DGKCSCGDYW
Sbjct: 614 VIRDPIRYHHFQDGKCSCGDYW 630

BLAST of CsaV3_3G039270 vs. Swiss-Prot
Match: sp|Q0WSH6|PP312_ARATH (Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis thaliana OX=3702 GN=LOI1 PE=1 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 8.9e-126
Identity = 237/585 (40.51%), Postives = 342/585 (58.46%), Query Frame = 0

Query: 17  NQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLP 76
           N  +F   ++ + +L L  T       G Q+HA  +K G      V  +  ++Y KT+L 
Sbjct: 107 NDFTFPCAFKAVASLRLPVT-------GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR 166

Query: 77  LFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKAC 136
             + ++FDE P+++  TW++ IS    +  P  A++ F         P+   + +   AC
Sbjct: 167 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 226

Query: 137 GFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWS 196
                 ++G  +H L +++G+  DV V + L+D Y KC +I  +  +F EM  +N VSW 
Sbjct: 227 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 286

Query: 197 GMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKM 256
            ++  Y Q  +  +A  L+ ++  + V+ +DF  SSV+  C+    LELG+ IH   +K 
Sbjct: 287 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 346

Query: 257 SFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLF 316
             + + FVGSAL+ +Y KCG IE + Q FDE+P +NL   NS++   A          LF
Sbjct: 347 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 406

Query: 317 EEMG--NVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRD-YGIEPETEHYASLVDLL 376
           EEM     G  PN+++F+S+L ACS AG VE G + F  MR  YGIEP  EHY+ +VD+L
Sbjct: 407 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 466

Query: 377 GRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHV 436
           GRAG ++ A   IK+MP++PT SVWGAL   CR+H   ++    A+ + ++D   SG HV
Sbjct: 467 GRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHV 526

Query: 437 LLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYE 496
           LLSN +AAAGR+ EA  +R+ L+  G+KK  G SW+   N+VH F A DRSH    EI  
Sbjct: 527 LLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQT 586

Query: 497 KLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMK 556
            L +L  EME AGY  D    L  ++ EEK   + +HSE+LA+AFGL++ P   PIR+ K
Sbjct: 587 TLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITK 646

Query: 557 NLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           NLR+CGDCH+  KF+S    R +IVRDNNRFHRF+DG CSC DYW
Sbjct: 647 NLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684

BLAST of CsaV3_3G039270 vs. TrEMBL
Match: tr|A0A0A0LF65|A0A0A0LF65_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G812190 PE=4 SV=1)

HSP 1 Score: 1213.4 bits (3138), Expect = 0.0e+00
Identity = 598/598 (100.00%), Postives = 598/598 (100.00%), Query Frame = 0

Query: 1   MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60
           MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP
Sbjct: 1   MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60

Query: 61  LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120
           LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND
Sbjct: 61  LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120

Query: 121 GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180
           GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA
Sbjct: 121 GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180

Query: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240
           RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS
Sbjct: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240

Query: 241 TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300
           TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML
Sbjct: 241 TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300

Query: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360
           IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE
Sbjct: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360

Query: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR 420
           PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR
Sbjct: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR 420

Query: 421 ILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480
           ILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA
Sbjct: 421 ILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480

Query: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGL 540
           GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGL
Sbjct: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGL 540

Query: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598

BLAST of CsaV3_3G039270 vs. TrEMBL
Match: tr|A0A1S3B830|A0A1S3B830_CUCME (putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucumis melo OX=3656 GN=LOC103486811 PE=4 SV=1)

HSP 1 Score: 1145.2 bits (2961), Expect = 0.0e+00
Identity = 563/598 (94.15%), Postives = 575/598 (96.15%), Query Frame = 0

Query: 1   MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60
           MLL TSTAIKPSQ+PLNQNSF+QNY+QICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP
Sbjct: 1   MLLPTSTAIKPSQSPLNQNSFQQNYKQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIP 60

Query: 61  LVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120
           +VSH+LINLYSK QLPL SLQVFDETPKKSSTTWSSV                 RRMLND
Sbjct: 61  VVSHHLINLYSKNQLPLLSLQVFDETPKKSSTTWSSVXXXXXXXXXXXXXXXXXRRMLND 120

Query: 121 GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180
           GVRPDDHIYPSATKACGFL R +VGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA
Sbjct: 121 GVRPDDHIYPSATKACGFLCRCEVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDA 180

Query: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240
           RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS
Sbjct: 181 RHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240

Query: 241 TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300
           T LELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML
Sbjct: 241 TLLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300

Query: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360
           IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLS+LYACSHAGLVEKGREYFSLMRDYGIE
Sbjct: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSLLYACSHAGLVEKGREYFSLMRDYGIE 360

Query: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR 420
           PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMA+FVADR
Sbjct: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMASFVADR 420

Query: 421 ILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480
           +LEM+S+SSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA
Sbjct: 421 VLEMNSTSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTA 480

Query: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGL 540
           GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEK+ETIRYHSERLAIAFGL
Sbjct: 481 GDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKSETIRYHSERLAIAFGL 540

Query: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW
Sbjct: 541 ITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598

BLAST of CsaV3_3G039270 vs. TrEMBL
Match: tr|F6HL10|F6HL10_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g08190 PE=4 SV=1)

HSP 1 Score: 968.0 bits (2501), Expect = 9.8e-279
Identity = 463/586 (79.01%), Postives = 520/586 (88.74%), Query Frame = 0

Query: 13  QNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSK 72
           QNPLNQ+S E NYR ICNLLLS T SRSL +GLQLH HI+K G  TI LV H+LIN YSK
Sbjct: 66  QNPLNQSSVEHNYRNICNLLLSITHSRSLFKGLQLHGHIVKSGFLTIHLVCHHLINFYSK 125

Query: 73  TQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSA 132
           +QLP +S QVF+ETP KSSTTWSSVISAFAQNE P LA+ FFRRML++GVRPDDHI+PSA
Sbjct: 126 SQLPHYSRQVFEETPVKSSTTWSSVISAFAQNELPSLAIDFFRRMLDNGVRPDDHIFPSA 185

Query: 133 TKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNV 192
           TKACG L R D+G+SVH  AVKTGY CDVFVGSS+VDMYAKCGEIGDAR +FDEMP+RNV
Sbjct: 186 TKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDARKMFDEMPDRNV 245

Query: 193 VSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGL 252
           VSWSGMIYGY+Q+ +  EAL LFKQALIED+DVNDFTFSSV+RVC +ST LELGK IHGL
Sbjct: 246 VSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNSTLLELGKQIHGL 305

Query: 253 CLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRV 312
           CLK S+DSSSFVGS+LISLYSKCGVIE AY VF EIP RNLG+WN+MLIACAQHAHT++ 
Sbjct: 306 CLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAMLIACAQHAHTEKA 365

Query: 313 FGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDL 372
           F LF++M  VGMKPNFI+FL VLYACSHAGLVEKG+ YF LM++YGIEP  +HYAS+VDL
Sbjct: 366 FDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELMKEYGIEPGAQHYASMVDL 425

Query: 373 LGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLH 432
           LGRAGKL++AVS+IK+MPM PTESVWGALLTGCRIH DTE+A+FVADR+ E+   SSG+H
Sbjct: 426 LGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTELASFVADRVFELGPVSSGIH 485

Query: 433 VLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIY 492
           VL+SNAYAAAGRYEEAAR RKMLRD+GVKKETGLSWVEEGN++HTF AGDRSH    +IY
Sbjct: 486 VLVSNAYAAAGRYEEAARARKMLRDQGVKKETGLSWVEEGNRIHTFAAGDRSHPYTKDIY 545

Query: 493 EKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVM 552
           +KLEEL EEME+AGY+ADTSFVL+ VDGEEKN+TIRYHSERLAIAFGLI+FPP RPIRVM
Sbjct: 546 KKLEELGEEMERAGYIADTSFVLQEVDGEEKNQTIRYHSERLAIAFGLISFPPERPIRVM 605

Query: 553 KNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           KNLRVCGDCH AIKFMSKCCGR +IVRDNNRFHRFEDG CSC DYW
Sbjct: 606 KNLRVCGDCHTAIKFMSKCCGRTIIVRDNNRFHRFEDGNCSCRDYW 651

BLAST of CsaV3_3G039270 vs. TrEMBL
Match: tr|A0A251N7Q7|A0A251N7Q7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G066200 PE=4 SV=1)

HSP 1 Score: 949.5 bits (2453), Expect = 3.6e-273
Identity = 448/597 (75.04%), Postives = 522/597 (87.44%), Query Frame = 0

Query: 2   LLSTSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPL 61
           L+   T  KP QNPLNQ+SFEQNYR ICNLLLS T+SR+L +GLQLH+H+LK G QTIPL
Sbjct: 13  LIPNFTLPKPPQNPLNQHSFEQNYRHICNLLLSLTQSRALPKGLQLHSHVLKSGFQTIPL 72

Query: 62  VSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDG 121
           +SH+LIN YSK QLPL S Q+F+E P+KSSTTWSSVIS+FAQNE P+LA+++FRRML   
Sbjct: 73  ISHHLINFYSKNQLPLHSRQIFEEAPEKSSTTWSSVISSFAQNELPVLAIEYFRRMLGTP 132

Query: 122 VRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDAR 181
           +RPDDHIYPS TK+C  L R DVG+SVH  AVKTG+  DVFVGSS+VDMYAKCGEI DAR
Sbjct: 133 LRPDDHIYPSVTKSCAILSRRDVGQSVHGFAVKTGFEFDVFVGSSVVDMYAKCGEIRDAR 192

Query: 182 HLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSST 241
            +FD++P +NVVSWSGMIYGYAQ+ +  EAL LFKQAL++++DVNDFTFSSVIRVC +ST
Sbjct: 193 KMFDDIPHKNVVSWSGMIYGYAQVGEDEEALRLFKQALVQNLDVNDFTFSSVIRVCGNST 252

Query: 242 FLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLI 301
            LELGK IHGLC K +F+ SSFVGS+L+SLYSKCGVIEGAY+VFDEIP +NLG+WN+MLI
Sbjct: 253 LLELGKQIHGLCFKTNFNLSSFVGSSLVSLYSKCGVIEGAYRVFDEIPVKNLGMWNAMLI 312

Query: 302 ACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEP 361
           ACAQH HT +   LF++MG+ GMKPNFI+FL VLYACSHAGLVEKG+ YF+LM++YGIEP
Sbjct: 313 ACAQHVHTDKALDLFKQMGSAGMKPNFITFLCVLYACSHAGLVEKGQYYFALMKEYGIEP 372

Query: 362 ETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRI 421
             +HYASLVDLLGRAGKL+EAV +I++MP+ PTES+WGALLTGCRIH DTE+AA VADR+
Sbjct: 373 GEQHYASLVDLLGRAGKLEEAVKIIEEMPIEPTESIWGALLTGCRIHGDTELAASVADRV 432

Query: 422 LEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAG 481
            E+   S GLHVL+SNAYAAAGR+EEAA+ RKMLRDRG+KKETGLSWVEEGNK+HTF AG
Sbjct: 433 FELGPVSPGLHVLMSNAYAAAGRFEEAAKARKMLRDRGMKKETGLSWVEEGNKIHTFAAG 492

Query: 482 DRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLI 541
           DR H +  EIY KLEEL EEMEKAGYVADTSFVLR V+ EEK++TIRYHSERLA+AFGLI
Sbjct: 493 DRRHMRTKEIYLKLEELGEEMEKAGYVADTSFVLREVNREEKDQTIRYHSERLAVAFGLI 552

Query: 542 TFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           TFPP RPIR+MKNLR+CGDCH AIKFMSKC GRV+IVRDNNRFHRFEDGKC+CGDYW
Sbjct: 553 TFPPDRPIRIMKNLRICGDCHTAIKFMSKCSGRVIIVRDNNRFHRFEDGKCTCGDYW 609

BLAST of CsaV3_3G039270 vs. TrEMBL
Match: tr|A0A2I4GEL6|A0A2I4GEL6_9ROSI (putative pentatricopeptide repeat-containing protein At5g52630 OS=Juglans regia OX=51240 GN=LOC109007214 PE=4 SV=1)

HSP 1 Score: 944.5 bits (2440), Expect = 1.2e-271
Identity = 453/596 (76.01%), Postives = 515/596 (86.41%), Query Frame = 0

Query: 5   TSTAIKPS--QNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLV 64
           T   +KP   QNPLNQ+SFEQ+YR +CNLLLS T SRSL +GLQ+HA I+K GLQTIPL+
Sbjct: 19  TPVLLKPPQLQNPLNQHSFEQSYRHVCNLLLSLTHSRSLPKGLQIHALIIKSGLQTIPLI 78

Query: 65  SHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGV 124
           SH+LIN YSK+QLPL S Q+FDE P+KSSTTWSSVIS+F+QNE P +AL+FFRRM   GV
Sbjct: 79  SHHLINFYSKSQLPLLSGQIFDEAPRKSSTTWSSVISSFSQNELPSIALEFFRRMFRTGV 138

Query: 125 RPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARH 184
           RPDDHI PSATK+C  L R D+G+S+HCL+VKTG+  DVFVGSS+VDMYAKCGEI  AR 
Sbjct: 139 RPDDHILPSATKSCAILSRCDIGQSIHCLSVKTGFEFDVFVGSSIVDMYAKCGEIRYARK 198

Query: 185 LFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTF 244
           +FDEMP +NVVSWSGMIYGYAQL D  EAL LFKQAL E++DVNDFTFSSVIRVC  ST 
Sbjct: 199 VFDEMPGKNVVSWSGMIYGYAQLGDDEEALRLFKQALFENLDVNDFTFSSVIRVCGYSTL 258

Query: 245 LELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIA 304
           LELGK IHG C K S+DSSSFVGS+LISLYSKCGVIEGAYQVF E+P +NLG WN+MLIA
Sbjct: 259 LELGKQIHGFCFKTSYDSSSFVGSSLISLYSKCGVIEGAYQVFAELPIKNLGTWNAMLIA 318

Query: 305 CAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPE 364
           CAQH HT+R F LF++M   GMKPNFI+FL VLYACSHAGLVEKGR YF LM++YGIEP 
Sbjct: 319 CAQHTHTERAFSLFKDMEAAGMKPNFITFLCVLYACSHAGLVEKGRYYFQLMKEYGIEPG 378

Query: 365 TEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRIL 424
            +HYAS+VDLLGRAGKLQ+AVS+IK+MPM PTESVWGALLTGCRIH DTE+AAF AD++ 
Sbjct: 379 GQHYASMVDLLGRAGKLQDAVSIIKEMPMEPTESVWGALLTGCRIHGDTELAAFAADKVF 438

Query: 425 EMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGD 484
           ++   S G+HVLLSNAYAAAGR+EEAA+ RKMLRD G+KKETGLSWVEEGN+VHTF +GD
Sbjct: 439 QLGPVSPGIHVLLSNAYAAAGRWEEAAKARKMLRDHGMKKETGLSWVEEGNRVHTFVSGD 498

Query: 485 RSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLIT 544
           R + K  EIY+KLEEL EEME AGYVADTSFVL+ VDGE+KN+ IRYHSERLAIAFGLIT
Sbjct: 499 RYNVKTREIYQKLEELMEEMESAGYVADTSFVLKGVDGEDKNQAIRYHSERLAIAFGLIT 558

Query: 545 FPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 599
           FPP RPIRVMKNLRVCGDCH AIKFMSKC GRV+IVRDNNRFHRFE G+C+CGDYW
Sbjct: 559 FPPERPIRVMKNLRVCGDCHTAIKFMSKCTGRVIIVRDNNRFHRFEHGRCTCGDYW 614

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004136748.10.0e+00100.00PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Cucum... [more]
XP_008443125.10.0e+0094.15PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Cucum... [more]
XP_022934208.10.0e+0091.62putative pentatricopeptide repeat-containing protein At5g52630 [Cucurbita moscha... [more]
XP_023527262.10.0e+0091.79putative pentatricopeptide repeat-containing protein At5g52630 [Cucurbita pepo s... [more]
XP_022982889.10.0e+0091.12putative pentatricopeptide repeat-containing protein At5g52630 [Cucurbita maxima... [more]
Match NameE-valueIdentityDescription
AT5G52630.12.0e-24569.11mitochondrial RNAediting factor 1[more]
AT3G23330.11.4e-12940.79Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G33170.12.4e-12940.25Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G03880.13.8e-12739.50Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G14850.14.9e-12740.51Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q9LTF4|PP429_ARATH3.6e-24469.11Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis th... [more]
sp|Q9LW63|PP251_ARATH2.5e-12840.79Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... [more]
sp|Q9SMZ2|PP347_ARATH4.3e-12840.25Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... [more]
sp|Q9SI53|PP147_ARATH6.8e-12639.50Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop... [more]
sp|Q0WSH6|PP312_ARATH8.9e-12640.51Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LF65|A0A0A0LF65_CUCSA0.0e+00100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G812190 PE=4 SV=1[more]
tr|A0A1S3B830|A0A1S3B830_CUCME0.0e+0094.15putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucumis melo O... [more]
tr|F6HL10|F6HL10_VITVI9.8e-27979.01Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g08190 PE=4 SV=... [more]
tr|A0A251N7Q7|A0A251N7Q7_PRUPE3.6e-27375.04Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G066200 PE=4 SV=1[more]
tr|A0A2I4GEL6|A0A2I4GEL6_9ROSI1.2e-27176.01putative pentatricopeptide repeat-containing protein At5g52630 OS=Juglans regia ... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR032867DYW_dom
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016554 cytidine to uridine editing
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G039270.1CsaV3_3G039270.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 193..217
e-value: 0.0091
score: 16.1
coord: 437..460
e-value: 0.57
score: 10.5
coord: 93..122
e-value: 4.3E-4
score: 20.2
coord: 366..390
e-value: 0.01
score: 15.9
coord: 266..292
e-value: 0.038
score: 14.2
coord: 165..192
e-value: 6.2E-4
score: 19.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 296..338
e-value: 0.0081
score: 16.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 93..125
e-value: 3.6E-4
score: 18.5
coord: 330..361
e-value: 2.9E-5
score: 21.9
coord: 166..193
e-value: 3.3E-4
score: 18.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 362..396
score: 8.21
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 160..194
score: 10.128
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 261..291
score: 7.048
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 226..260
score: 5.097
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 292..326
score: 9.58
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 474..509
score: 5.064
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 327..361
score: 9.767
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 24..58
score: 5.251
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 90..124
score: 10.775
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 428..462
score: 7.87
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 7..139
e-value: 3.1E-13
score: 51.4
coord: 140..246
e-value: 5.5E-18
score: 66.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 262..525
e-value: 3.2E-40
score: 140.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 401..450
coord: 171..215
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 465..588
e-value: 3.8E-37
score: 126.9
NoneNo IPR availablePANTHERPTHR24015:SF576SUBFAMILY NOT NAMEDcoord: 19..513
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 19..513