Lsi03G012890 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G012890
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Thioredoxin-like 7 family protein
Location	chr03 : 23701856 .. 23704040 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACGCTATCAGCAAGATTGCTTTTGCCCCTTTTCCGCGTTCTTCTTTGTCTCCTTGTCGTCTTCATCATCTTCCTCCACCTTCTTTCGGCCTTAAATCTGCCTATTCTTCTTCTCATCAACGGCTTTCTGTGAAATTACCATCCACCTCGCGCCCGTTTTCGAGCAGTCACTCCTATGGCAGAATAATACAGTTTACAGAAGCTTGGTGTTTCTCCAGGAATTCCGTTGCTCCTGCACGATCTTCCACGATTTCCCATGTTCGTATTGCTATCTTTAATTTCAACTCTAACGCCCCATTGAATTTTTACCTGATATTAGGGTTATTGGGTTACCTTTGTAACTTTTGTTTGTATCGTTATCTTCTCTGTGTTTATTTTATTTTGATTCCGATTGGGAAACTCTGCTGTCTCTTCATGGTTTTGATCTGGGTCTTTATGAACAGAACTAGTTGCTCTATACCTATATATTTCTATATTTTAATCCTTTTCCTTGTCTAGAATATTTGCTGATAAATTCCTATATTGATTTTCCATTCATGGAAGAATCCCACTTCTGTAATTCGGTTAGCACTTGATTATGTACACAAATTATTATGCATTTTGTTTATTAACCCTTTTGTTGCTATTCAATAGAGTGGCTTTCGGATTCCAAAAGCTCAGAAATGGTGGGAAAAAGGGTTGCAACCTAATATGAAAGAGGTGACCGGTGCACATGATCTTGTGGATTCTCTTTTAAATGCTGGGGATAAGCTTGTTATTGTCGATTTCTACTCCCCTGGTTGTGGTGGCTGCAAAGCTCTTCACCCGAAGGTCTTCCTCGTTCTTTACTGTCTAGAAAAATCTATCTTCTTAGGTTTCTTTGTCCTGAAGTTTGTACATTGTACGCAGATATGCCAATTTGCTGAGATGTATCCTGACATCCAATTTTTGCAAGTGAACTATGAAGAGCACAAATCCATGTGTTATAGTCTTGGTGTTCATGTGCTTCCCTTCTTTCGCTTTTACAGAGGTGCTCAGGGTCGCCTTTGCAGCTTTAGCTGCACTAATGCAACGGTAAGAAATCTTTAAATAGATTGGGAGTGTTCTGCTATCGTAATGTTATTAGATTATAATATTTGATTGTGGATGTATGTTCTTAAAGAAGCATGCTTTTCCTAAAATGCTCTGGTTTTTTTCTCACTTCGGTCTACTTATTTAGCAGTTGCTTTTGGTAGGAACCTGCTTTACGATAGAGTATGTACTATGCAGTATTGTTGTCTTTTCATCGATGTTGCCTGTTATTTATCGGTTTTAATTTGTCATTTAACCACATTTGAAATGATTTATTCAACAATAGAGCTGTTTTCTGGTTTCATCCGTGCCTCATGAGTATCCAAATTCTGTTTTTTTTTCCTCTGCTAATGCACTCGCTTCTCCATCAGTTTATTGATGAAGAATTGGTCTGATCTCACAGATTAAGAAATTCAAGGATGCATTAGCCAAGCACAACACTGATCGATGCAGCCTTGGCCCCACGCAAGGGTTGGAGGAGAAAGATCTTGTTGCACTTGCCGCCAACAAAGAATTGTCTTTCAACTACACGCCTAAACCAGCAGAAGAGGTTCCCATCCCCATCCCTGCGACTGTGGGAGGCGTAAGAATATCGGAATCAGAACAATCACATCTGGACTTGGAGCAACTGCCTCTTCCTCTTCCTTCAACTATCCTAAAGTCTGCCCAAGTCCCCAAGGAGAATGCCTATGCGGGATGAAGCCGACTCCCATATCCTATCCTTAATACGAGTACTTTTGGTTATAAAGGTTCAGGGGTCCTATATTAACGAGACCCGGTGAAGTTGTATGGTTTGTTTCTTCTTTTTTCTTTTGGTGGCTTGGATCCCAGCCTGCTGATTCTTTAGAACATCAGCAGCCAGCTGTGTGATTGATTATATATATAGTTGCTCGTTGTTGTACATGGTTGTATAAAGCTTCTCTGCAAGATTATGAGTTCAAAGATTTCTGTAATATTGTAACTAATAAATTGGTGTGAGTGCATTGAAGAAACTTGTGCACGTTGATGAATATCATACTGAAAGTGAAAACCACCATGGCTAATTAATTGCCTCAAGAGAATTTTCTTCCATAGAAGCTATGTCATTATTGTTAATTATGCAATGTCTGACTTATATATGTTTGCTCTA

mRNA sequence

ATGGCAGACGCTATCAGCAAGATTGCTTTTGCCCCTTTTCCGCGTTCTTCTTTGTCTCCTTGTCGTCTTCATCATCTTCCTCCACCTTCTTTCGGCCTTAAATCTGCCTATTCTTCTTCTCATCAACGGCTTTCTGTGAAATTACCATCCACCTCGCGCCCGTTTTCGAGCAGTCACTCCTATGGCAGAATAATACAGTTTACAGAAGCTTGGTGTTTCTCCAGGAATTCCGTTGCTCCTGCACGATCTTCCACGATTTCCCATAGTGGCTTTCGGATTCCAAAAGCTCAGAAATGGTGGGAAAAAGGGTTGCAACCTAATATGAAAGAGGTGACCGGTGCACATGATCTTGTGGATTCTCTTTTAAATGCTGGGGATAAGCTTGTTATTGTCGATTTCTACTCCCCTGGTTGTGGTGGCTGCAAAGCTCTTCACCCGAAGATATGCCAATTTGCTGAGATGTATCCTGACATCCAATTTTTGCAAGTGAACTATGAAGAGCACAAATCCATGTGTTATAGTCTTGGTGTTCATGTGCTTCCCTTCTTTCGCTTTTACAGAGGTGCTCAGGGTCGCCTTTGCAGCTTTAGCTGCACTAATGCAACGATTAAGAAATTCAAGGATGCATTAGCCAAGCACAACACTGATCGATGCAGCCTTGGCCCCACGCAAGGGTTGGAGGAGAAAGATCTTGTTGCACTTGCCGCCAACAAAGAATTGTCTTTCAACTACACGCCTAAACCAGCAGAAGAGGTTCCCATCCCCATCCCTGCGACTGTGGGAGGCGTAAGAATATCGGAATCAGAACAATCACATCTGGACTTGGAGCAACTGCCTCTTCCTCTTCCTTCAACTATCCTAAAGTCTGCCCAAGTCCCCAAGGAGAATGCCTATGCGGGATGAAGCCGACTCCCATATCCTATCCTTAATACGAGTACTTTTGGTTATAAAGGTTCAGGGGTCCTATATTAACGAGACCCGGTGAAGTTGTATGGTTTGTTTCTTCTTTTTTCTTTTGGTGGCTTGGATCCCAGCCTGCTGATTCTTTAGAACATCAGCAGCCAGCTGTGTGATTGATTATATATATAGTTGCTCGTTGTTGTACATGGTTGTATAAAGCTTCTCTGCAAGATTATGAGTTCAAAGATTTCTGTAATATTGTAACTAATAAATTGGTGTGAGTGCATTGAAGAAACTTGTGCACGTTGATGAATATCATACTGAAAGTGAAAACCACCATGGCTAATTAATTGCCTCAAGAGAATTTTCTTCCATAGAAGCTATGTCATTATTGTTAATTATGCAATGTCTGACTTATATATGTTTGCTCTA

Coding sequence (CDS)

ATGGCAGACGCTATCAGCAAGATTGCTTTTGCCCCTTTTCCGCGTTCTTCTTTGTCTCCTTGTCGTCTTCATCATCTTCCTCCACCTTCTTTCGGCCTTAAATCTGCCTATTCTTCTTCTCATCAACGGCTTTCTGTGAAATTACCATCCACCTCGCGCCCGTTTTCGAGCAGTCACTCCTATGGCAGAATAATACAGTTTACAGAAGCTTGGTGTTTCTCCAGGAATTCCGTTGCTCCTGCACGATCTTCCACGATTTCCCATAGTGGCTTTCGGATTCCAAAAGCTCAGAAATGGTGGGAAAAAGGGTTGCAACCTAATATGAAAGAGGTGACCGGTGCACATGATCTTGTGGATTCTCTTTTAAATGCTGGGGATAAGCTTGTTATTGTCGATTTCTACTCCCCTGGTTGTGGTGGCTGCAAAGCTCTTCACCCGAAGATATGCCAATTTGCTGAGATGTATCCTGACATCCAATTTTTGCAAGTGAACTATGAAGAGCACAAATCCATGTGTTATAGTCTTGGTGTTCATGTGCTTCCCTTCTTTCGCTTTTACAGAGGTGCTCAGGGTCGCCTTTGCAGCTTTAGCTGCACTAATGCAACGATTAAGAAATTCAAGGATGCATTAGCCAAGCACAACACTGATCGATGCAGCCTTGGCCCCACGCAAGGGTTGGAGGAGAAAGATCTTGTTGCACTTGCCGCCAACAAAGAATTGTCTTTCAACTACACGCCTAAACCAGCAGAAGAGGTTCCCATCCCCATCCCTGCGACTGTGGGAGGCGTAAGAATATCGGAATCAGAACAATCACATCTGGACTTGGAGCAACTGCCTCTTCCTCTTCCTTCAACTATCCTAAAGTCTGCCCAAGTCCCCAAGGAGAATGCCTATGCGGGATGA

Protein sequence

MADAISKIAFAPFPRSSLSPCRLHHLPPPSFGLKSAYSSSHQRLSVKLPSTSRPFSSSHSYGRIIQFTEAWCFSRNSVAPARSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGAHDLVDSLLNAGDKLVIVDFYSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAANKELSFNYTPKPAEEVPIPIPATVGGVRISESEQSHLDLEQLPLPLPSTILKSAQVPKENAYAG

Homology

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BLAST of Lsi03G012890 vs. Swiss-Prot
Match: TRL11_ARATH (Thioredoxin-like 1-1, chloroplastic OS=Arabidopsis thaliana GN=At1g08570 PE=2 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.5e-81
Identity = 172/296 (58.11%), Postives = 202/296 (68.24%), Query Frame = 1


Query: 1   MADAISKIAFAPFPRSSLSPCRLHH------LPPPSFG---LKSAYSSSHQRLSVKLPST 60
           M + ISK +        L  C  HH        P SFG   LK ++S       +KL S 
Sbjct: 1   MTEVISKTSLF------LGACGNHHRVDDFSFSPVSFGGFGLKKSFSC------LKLKS- 60

Query: 61  SRPFSSSHSYGRIIQFTEAW--CFSRNSVAPARSSTISHSGFRIPKAQKWWEKGLQPNMK 120
            +P  S   YG+ I F ++    F R+S   A+++       RI  AQKWWEKGL+ NM+
Sbjct: 61  QKPLRSVF-YGKQIVFGDSQDESFRRSSAITAQTT------LRIGTAQKWWEKGLKDNMR 120

Query: 121 EVTGAHDLVDSLLNAGDKLVIVDFYSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHK 180
           E++ A +LVDSL NAGDKLV+VDF+SPGCGGCKALHPKICQFAEM PD+QFLQVNYEEHK
Sbjct: 121 EISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEEHK 180

Query: 181 SMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEK 240
           SMCYSLGVHVLPFFRFYRG+QGR+CSFSCTNATIKKF+DALAKH  DRCSLGPT+GLEEK
Sbjct: 181 SMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIKKFRDALAKHGPDRCSLGPTKGLEEK 240

Query: 241 DLVALAANKELSFNYTPKPAEEVPIPIPATVGGVRISESEQSHLDLE-QLPLPLPS 285
           +LVALAANKEL+F YTPKP   VP+            E E +  D    LP+PLPS
Sbjct: 241 ELVALAANKELNFTYTPKP---VPV------------EKEAATPDSNPSLPVPLPS 261

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BLAST of Lsi03G012890 vs. Swiss-Prot
Match: TRL12_ORYSJ (Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0326500 PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 3.2e-76
Identity = 137/179 (76.54%), Postives = 148/179 (82.68%), Query Frame = 1


Query: 75  RNSVAPARSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGAHDLVDSLLNAGDKLVIVDFY 134
           RN VAP + +          KA KWWEKGLQPNM+EV  A DLVDSL NAGD LVIVDF+
Sbjct: 69  RNLVAPVQMN------LAFAKATKWWEKGLQPNMREVESAQDLVDSLTNAGDNLVIVDFF 128

Query: 135 SPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLC 194
           SPGCGGC+ALHPKICQ AE  PD+ FLQVNYEEHKSMCYSL VHVLPFFRFYRGAQGRLC
Sbjct: 129 SPGCGGCRALHPKICQIAEQNPDVLFLQVNYEEHKSMCYSLHVHVLPFFRFYRGAQGRLC 188

Query: 195 SFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAANKELSFNYTPKPAEEVP 254
           SFSCTNATIKKF+DALAKH  DRCSLGPT+GLEE +L+ALAANK+L FNYT KP E VP
Sbjct: 189 SFSCTNATIKKFRDALAKHKPDRCSLGPTRGLEESELLALAANKDLQFNYTKKP-ELVP 240

[Close]

BLAST of Lsi03G012890 vs. Swiss-Prot
Match: TRL11_ORYSJ (Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0684100 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 7.6e-70
Identity = 129/197 (65.48%), Postives = 148/197 (75.13%), Query Frame = 1


Query: 93  IPKAQKWWEKGLQPNMKEVTGAHDLVDSLLNAGDKLVIVDFYSPGCGGCKALHPKICQFA 152
           I KA +WWEK LQPNM+E+  A DL DSLLNAGDKLV+VDF+SPGCGGC+ALHPKI Q A
Sbjct: 80  IGKAMRWWEKCLQPNMREIESAQDLADSLLNAGDKLVVVDFFSPGCGGCRALHPKIAQLA 139

Query: 153 EMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAK 212
           E  P++ FLQVNYE+HKSMCYSL VHVLPFFRFYRGAQGR+ SFSCTNATIKKFKDALAK
Sbjct: 140 EKNPEVLFLQVNYEKHKSMCYSLHVHVLPFFRFYRGAQGRVSSFSCTNATIKKFKDALAK 199

Query: 213 HNTDRCSLGPTQGLEEKDLVALAANKELSFNYTPKPAEEVPI----------------PI 272
           H  DRC LGP +GLEE +L+ALA N++L+F YTP   + VPI                P+
Sbjct: 200 HGPDRCGLGPAKGLEESELMALAINRDLNFTYTPN-QDLVPIADALLKEAAAPGGPWLPL 259

Query: 273 PATVGGVRISESEQSHL 274
           PAT   + I  SE S L
Sbjct: 260 PATATQLFIQGSENSLL 275

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BLAST of Lsi03G012890 vs. Swiss-Prot
Match: TRL13_ARATH (Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana GN=At2g33270 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 8.7e-66
Identity = 110/154 (71.43%), Postives = 133/154 (86.36%), Query Frame = 1


Query: 93  IPKAQKWWEKGLQPNMKEVTGAHDLVDSLLNAGDKLVIVDFYSPGCGGCKALHPKICQFA 152
           I + QKWWEK L+PNMK VT   DLV SL NAGDKLV+VDF+SP CGGCKALHPKIC+ A
Sbjct: 80  IGRNQKWWEKELKPNMKSVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKIA 139

Query: 153 EMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAK 212
           E  P+++FLQVNYEEH+S+C SL +HVLPFFRFYRG+ GR+CSFSCTNATI+KFK+AL K
Sbjct: 140 EKNPEVEFLQVNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTNATIRKFKEALEK 199

Query: 213 HNTDRCSLGPTQGLEEKDLVALAANKELSFNYTP 247
           H  ++CS+G T+GLEEK+LVA+AANK+LSF+Y P
Sbjct: 200 HGREQCSIGETKGLEEKELVAMAANKDLSFDYKP 233

[Close]

BLAST of Lsi03G012890 vs. Swiss-Prot
Match: TRL12_ARATH (Thioredoxin-like 1-2, chloroplastic OS=Arabidopsis thaliana GN=At5g61440 PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 4.3e-57
Identity = 101/171 (59.06%), Postives = 130/171 (76.02%), Query Frame = 1


Query: 73  FSRNSVAPARSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGAHDLVDSLLNAGDKLVIVD 132
           FS +S +P ++ T   S   + +  +WWEK    NM E+  A+ LVDSLLNAGD+LV++D
Sbjct: 55  FSSSSASPFQAKT---SSIGMSRGMRWWEKSTNHNMLEIQSANHLVDSLLNAGDRLVVLD 114

Query: 133 FYSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGR 192
           FYSPGCGGCK+LHPKICQ AE  P++ FL+VN EE ++MC+ L VHVLPFF+FYRGA+G+
Sbjct: 115 FYSPGCGGCKSLHPKICQLAETNPNVMFLKVNQEELRTMCHGLNVHVLPFFKFYRGAEGK 174

Query: 193 LCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAANKELSFN 244
           +CSFSCT ATI KFK AL KH ++RCSLG  +GL+EK+L ALA+  EL  N
Sbjct: 175 VCSFSCTIATINKFKKALDKHGSERCSLGDAKGLDEKELAALASVGELKMN 222

[Close]

BLAST of Lsi03G012890 vs. TrEMBL
Match: A0A0A0LD91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G844860 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 2.1e-135
Identity = 258/313 (82.43%), Postives = 269/313 (85.94%), Query Frame = 1


Query: 1   MADAISKIAF-APFPRSSLSPCR-LHHLPPPSFGLKSAYSSSH----QRLSVKLPSTSRP 60
           MADA+SKIAF APFP SS S  R LH L  P    KS  SSSH    +R+SVKLPSTS P
Sbjct: 1   MADALSKIAFLAPFPPSSSSSHRHLHRLSLPFSEFKSVDSSSHPFNWKRISVKLPSTSGP 60

Query: 61  FSSSHSYGRIIQFTEAWCFSRNSVAPARSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGA 120
           FSSS+SYGR I+ TE     RNSV+P RSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGA
Sbjct: 61  FSSSYSYGRRIESTE-----RNSVSPPRSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGA 120

Query: 121 HDLVDSLLNAGDKLVIVDFYSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYS 180
           HD VDSLLNAGDKLVIVDF+SPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYS
Sbjct: 121 HDFVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYS 180

Query: 181 LGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVAL 240
           LGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDL AL
Sbjct: 181 LGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLAAL 240

Query: 241 AANKELSFNYTPKPAEEV------PIPIPATVGGVRISESEQSHLDLEQLPLPLPSTILK 300
           AANKELSF+YTPKPAEEV      PIPIPATVGGVR SESE+S  D+ QLPLPL STILK
Sbjct: 241 AANKELSFDYTPKPAEEVPISIAIPIPIPATVGGVRTSESERSRSDVGQLPLPLSSTILK 300

[Close]

BLAST of Lsi03G012890 vs. TrEMBL
Match: M5W2V2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009372mg PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 3.1e-86
Identity = 164/237 (69.20%), Postives = 180/237 (75.95%), Query Frame = 1


Query: 56  SSSHSYGRIIQFTEAWCFSRNSVAPARSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGAH 115
           S  H  G  +Q   A     N  + A S   S +G R  KA KWWEKG QPNMKEVT A 
Sbjct: 58  SDFHGKGFALQEHRAMPSRGNFQSQAASVVNSLTGLRFGKALKWWEKGNQPNMKEVTSAQ 117

Query: 116 DLVDSLLNAGDKLVIVDFYSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYSL 175
           DLVDSL NAGDKLV+VDF+SPGCGGCKALHPKICQ AEM PD+QFLQVNYEEHKSMCYSL
Sbjct: 118 DLVDSLSNAGDKLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEHKSMCYSL 177

Query: 176 GVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALA 235
            VHVLPFFRFYRGA GRLCSFSCTNATIKKF+DALAKH  DRCSLGPT+GLEEK+L+ALA
Sbjct: 178 NVHVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHKPDRCSLGPTKGLEEKELLALA 237

Query: 236 ANKELSFNYTPKPAEEVPIPIPATVGGVRISESEQSHLDLEQLPLPLPSTILKSAQV 293
           ANK++SFNYTPKP E VP P    +    +SE+  S L+ E LPLP   T  KSAQV
Sbjct: 238 ANKDISFNYTPKPVEAVPTPAKEVI----VSEAAPSRLNSEALPLP-SMTTSKSAQV 289

[Close]

BLAST of Lsi03G012890 vs. TrEMBL
Match: B9IPM3_POPTR (Thioredoxin-like 7 family protein OS=Populus trichocarpa GN=POPTR_0019s04750g PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.6e-85
Identity = 161/244 (65.98%), Postives = 185/244 (75.82%), Query Frame = 1


Query: 52  SRPFSSSHSYGRIIQFTEAWCFSRNSVAPARSSTISHSGFRIPKAQKWWEKGLQPNMKEV 111
           SR  S S  YG+ +         R    P ++S ++ +G ++  A+KWWEKGLQPNM+EV
Sbjct: 50  SRSSSCSDFYGKRVVVHGNQSKPRRGYLP-QASVVALTGLKLKYAKKWWEKGLQPNMREV 109

Query: 112 TGAHDLVDSLLNAGDKLVIVDFYSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSM 171
           T A DLVDSL+NAGD+LV+VDF+SPGCGGCKALHPKICQ AEM PD+QFLQVNYEEHKSM
Sbjct: 110 TSAQDLVDSLMNAGDQLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEHKSM 169

Query: 172 CYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDL 231
           CYSL VHVLPFFRFYRGA GRLCSFSCTNATIKKFKDALAKH  +RCSLGPT+GLEEK+L
Sbjct: 170 CYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPERCSLGPTKGLEEKEL 229

Query: 232 VALAANKELSFNYTPKPAEEVPIPIPATVGGVRISESEQSHLDLEQLPLPLPSTILKSAQ 291
           VALAANK+LSF YTPKP +  P+P    V       +  SH D   LPLPLP T  KSAQ
Sbjct: 230 VALAANKDLSFTYTPKPVQPAPVPAEEEVA----PTAGPSHSD-RGLPLPLPITSSKSAQ 287

Query: 292 VPKE 296
             +E
Sbjct: 290 DSEE 287

[Close]

BLAST of Lsi03G012890 vs. TrEMBL
Match: M5VQP2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009372mg PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.4e-85
Identity = 164/238 (68.91%), Postives = 180/238 (75.63%), Query Frame = 1


Query: 56  SSSHSYGRIIQFTEAWCFSRNSVAPARSSTIS-HSGFRIPKAQKWWEKGLQPNMKEVTGA 115
           S  H  G  +Q   A     N  + A S   S  +G R  KA KWWEKG QPNMKEVT A
Sbjct: 58  SDFHGKGFALQEHRAMPSRGNFQSQAASVVNSLQTGLRFGKALKWWEKGNQPNMKEVTSA 117

Query: 116 HDLVDSLLNAGDKLVIVDFYSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYS 175
            DLVDSL NAGDKLV+VDF+SPGCGGCKALHPKICQ AEM PD+QFLQVNYEEHKSMCYS
Sbjct: 118 QDLVDSLSNAGDKLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEHKSMCYS 177

Query: 176 LGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVAL 235
           L VHVLPFFRFYRGA GRLCSFSCTNATIKKF+DALAKH  DRCSLGPT+GLEEK+L+AL
Sbjct: 178 LNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHKPDRCSLGPTKGLEEKELLAL 237

Query: 236 AANKELSFNYTPKPAEEVPIPIPATVGGVRISESEQSHLDLEQLPLPLPSTILKSAQV 293
           AANK++SFNYTPKP E VP P    +    +SE+  S L+ E LPLP   T  KSAQV
Sbjct: 238 AANKDISFNYTPKPVEAVPTPAKEVI----VSEAAPSRLNSEALPLP-SMTTSKSAQV 290

[Close]

BLAST of Lsi03G012890 vs. TrEMBL
Match: V4U353_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021469mg PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 7.6e-85
Identity = 170/264 (64.39%), Postives = 191/264 (72.35%), Query Frame = 1


Query: 34  KSAYSSSHQRLSVKLPSTSRPFSSS-HSYGRIIQFTEAWCFSRNSVAPARSSTISHS--- 93
           KS   S   +L  +    S P +S  H +G +        F  N   P R S+   S   
Sbjct: 29  KSCAGSCSMKLRSQALRLSSPLTSDFHGHGVV--------FQENKAIPKRGSSSKFSISA 88

Query: 94  --GFRIPKAQKWWEKGLQPNMKEVTGAHDLVDSLLNAGDKLVIVDFYSPGCGGCKALHPK 153
             G RI KAQ+WWEKGLQPNM+EV  A DLV+SL +AGDKLV+VDF+SPGCGGCKALHPK
Sbjct: 89  QTGLRIGKAQRWWEKGLQPNMREVASAQDLVESLWHAGDKLVVVDFFSPGCGGCKALHPK 148

Query: 154 ICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFK 213
           ICQ AEM PD+QFLQVNYEEHKSMCYSL VHVLPFFRFYRGA GRLCSFSCTNATIKKFK
Sbjct: 149 ICQLAEMNPDVQFLQVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFK 208

Query: 214 DALAKHNTDRCSLGPTQGLEEKDLVALAANKELSFNYTPKPAEEVPIPIPATVGGVRISE 273
           DALAKH  DRC LGPT+GLEEK+L+ALAANK+LSFNYTPKP    P+P PA V  V ++E
Sbjct: 209 DALAKHTPDRCGLGPTKGLEEKELLALAANKDLSFNYTPKPQ---PMPAPA-VEEVGLAE 268

Query: 274 SEQSHLDLEQLPLPLPSTILKSAQ 292
               H  +  LPLPLPST LKS Q
Sbjct: 269 VPPPH-SILNLPLPLPST-LKSTQ 278

[Close]

BLAST of Lsi03G012890 vs. TAIR10
Match: AT1G08570.1 (AT1G08570.1 atypical CYS HIS rich thioredoxin 4)

HSP 1 Score: 304.3 bits (778), Expect = 8.3e-83
Identity = 172/296 (58.11%), Postives = 202/296 (68.24%), Query Frame = 1


Query: 1   MADAISKIAFAPFPRSSLSPCRLHH------LPPPSFG---LKSAYSSSHQRLSVKLPST 60
           M + ISK +        L  C  HH        P SFG   LK ++S       +KL S 
Sbjct: 1   MTEVISKTSLF------LGACGNHHRVDDFSFSPVSFGGFGLKKSFSC------LKLKS- 60

Query: 61  SRPFSSSHSYGRIIQFTEAW--CFSRNSVAPARSSTISHSGFRIPKAQKWWEKGLQPNMK 120
            +P  S   YG+ I F ++    F R+S   A+++       RI  AQKWWEKGL+ NM+
Sbjct: 61  QKPLRSVF-YGKQIVFGDSQDESFRRSSAITAQTT------LRIGTAQKWWEKGLKDNMR 120

Query: 121 EVTGAHDLVDSLLNAGDKLVIVDFYSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHK 180
           E++ A +LVDSL NAGDKLV+VDF+SPGCGGCKALHPKICQFAEM PD+QFLQVNYEEHK
Sbjct: 121 EISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEEHK 180

Query: 181 SMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEK 240
           SMCYSLGVHVLPFFRFYRG+QGR+CSFSCTNATIKKF+DALAKH  DRCSLGPT+GLEEK
Sbjct: 181 SMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIKKFRDALAKHGPDRCSLGPTKGLEEK 240

Query: 241 DLVALAANKELSFNYTPKPAEEVPIPIPATVGGVRISESEQSHLDLE-QLPLPLPS 285
           +LVALAANKEL+F YTPKP   VP+            E E +  D    LP+PLPS
Sbjct: 241 ELVALAANKELNFTYTPKP---VPV------------EKEAATPDSNPSLPVPLPS 261

[Close]

BLAST of Lsi03G012890 vs. TAIR10
Match: AT2G33270.1 (AT2G33270.1 atypical CYS HIS rich thioredoxin 3)

HSP 1 Score: 251.9 bits (642), Expect = 4.9e-67
Identity = 110/154 (71.43%), Postives = 133/154 (86.36%), Query Frame = 1


Query: 93  IPKAQKWWEKGLQPNMKEVTGAHDLVDSLLNAGDKLVIVDFYSPGCGGCKALHPKICQFA 152
           I + QKWWEK L+PNMK VT   DLV SL NAGDKLV+VDF+SP CGGCKALHPKIC+ A
Sbjct: 80  IGRNQKWWEKELKPNMKSVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKIA 139

Query: 153 EMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAK 212
           E  P+++FLQVNYEEH+S+C SL +HVLPFFRFYRG+ GR+CSFSCTNATI+KFK+AL K
Sbjct: 140 EKNPEVEFLQVNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTNATIRKFKEALEK 199

Query: 213 HNTDRCSLGPTQGLEEKDLVALAANKELSFNYTP 247
           H  ++CS+G T+GLEEK+LVA+AANK+LSF+Y P
Sbjct: 200 HGREQCSIGETKGLEEKELVAMAANKDLSFDYKP 233

[Close]

BLAST of Lsi03G012890 vs. TAIR10
Match: AT5G61440.1 (AT5G61440.1 atypical CYS HIS rich thioredoxin 5)

HSP 1 Score: 223.0 bits (567), Expect = 2.4e-58
Identity = 101/171 (59.06%), Postives = 130/171 (76.02%), Query Frame = 1


Query: 73  FSRNSVAPARSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGAHDLVDSLLNAGDKLVIVD 132
           FS +S +P ++ T   S   + +  +WWEK    NM E+  A+ LVDSLLNAGD+LV++D
Sbjct: 55  FSSSSASPFQAKT---SSIGMSRGMRWWEKSTNHNMLEIQSANHLVDSLLNAGDRLVVLD 114

Query: 133 FYSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGR 192
           FYSPGCGGCK+LHPKICQ AE  P++ FL+VN EE ++MC+ L VHVLPFF+FYRGA+G+
Sbjct: 115 FYSPGCGGCKSLHPKICQLAETNPNVMFLKVNQEELRTMCHGLNVHVLPFFKFYRGAEGK 174

Query: 193 LCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAANKELSFN 244
           +CSFSCT ATI KFK AL KH ++RCSLG  +GL+EK+L ALA+  EL  N
Sbjct: 175 VCSFSCTIATINKFKKALDKHGSERCSLGDAKGLDEKELAALASVGELKMN 222

[Close]

BLAST of Lsi03G012890 vs. TAIR10
Match: AT4G26160.1 (AT4G26160.1 atypical CYS HIS rich thioredoxin 1)

HSP 1 Score: 145.6 bits (366), Expect = 5.0e-35
Identity = 61/122 (50.00%), Postives = 90/122 (73.77%), Query Frame = 1


Query: 98  KWWEKGLQPNMKEVTGAHDLVDSLLNAGDKLVIVDFYSPGCGGCKALHPKICQFAEMYPD 157
           KWWE+   PNM ++T A   +++L +AGD+LVIVDFY   CG C+A+ PK+C+ A+ +P+
Sbjct: 85  KWWERKAGPNMIDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKEHPN 144

Query: 158 IQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDR 217
           I FL+VN++E+KS+C SL V VLP+F FYRGA G++ SFSC+ A  +K ++A+ +HN   
Sbjct: 145 ILFLKVNFDENKSLCKSLNVKVLPYFHFYRGADGQVESFSCSLAKFQKLREAIERHNVGS 204

Query: 218 CS 220
            S
Sbjct: 205 IS 206

[Close]

BLAST of Lsi03G012890 vs. TAIR10
Match: AT4G29670.2 (AT4G29670.2 atypical CYS HIS rich thioredoxin 2)

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-29
Identity = 75/189 (39.68%), Postives = 107/189 (56.61%), Query Frame = 1


Query: 33  LKSAYSSSHQRLSVKLPSTSRPFSSSHSYGRIIQFTEAWCFSRNSVAPARSSTISHSGFR 92
           + S++SS    L+   P    P S+ +S  R+   + +   S +   P+ S   SH   R
Sbjct: 17  VSSSFSSFATALNPLQPCLP-PNSNLNSDKRLRLLSSSPSCSSSHYHPS-SGLGSHLPLR 76

Query: 93  IPKAQ----------------KWWEKGLQPNMKEVTGAHDLVDSLLNAGDKLVIVDFYSP 152
            PK+Q                KWWE+   PNM ++    + + +L  AG++LVIV+FY  
Sbjct: 77  RPKSQVVRVKVDENVAETEPPKWWERNA-PNMVDIHSTEEFLSALSGAGERLVIVEFYGT 136

Query: 153 GCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSF 206
            C  C+AL PK+C+ A  +PDI FL+VN++E+K MC SL V VLPFF FYRGA G+L SF
Sbjct: 137 WCASCRALFPKLCKTAVEHPDIVFLKVNFDENKPMCKSLNVRVLPFFHFYRGADGQLESF 196

[Close]

BLAST of Lsi03G012890 vs. NCBI nr
Match: gi|659130754|ref|XP_008465333.1| (PREDICTED: thioredoxin-like 1-1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 500.7 bits (1288), Expect = 1.7e-138
Identity = 260/307 (84.69%), Postives = 271/307 (88.27%), Query Frame = 1


Query: 1   MADAISKIAF-APFP-RSSLSPCRLHHLPPPSFGLKSAYSSSH----QRLSVKLPSTSRP 60
           MADA+SK+AF APFP  SS S   LH L  P  G KS  SSSH    QR+SVKLPST+ P
Sbjct: 1   MADALSKVAFLAPFPPSSSYSHRHLHCLSLPFSGFKSVDSSSHPFNWQRISVKLPSTAGP 60

Query: 61  FSSSHSYGRIIQFTEAWCFSRNSVAPARSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGA 120
           FSSS++YGR I+FTE     RNSV+P RSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGA
Sbjct: 61  FSSSYAYGRRIEFTE-----RNSVSPPRSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGA 120

Query: 121 HDLVDSLLNAGDKLVIVDFYSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYS 180
           HDLVDSLLNAGDKLVIVDF+SPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYS
Sbjct: 121 HDLVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYS 180

Query: 181 LGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVAL 240
           LGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVAL
Sbjct: 181 LGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVAL 240

Query: 241 AANKELSFNYTPKPAEEVPIPIPATVGGVRISESEQSHLDLEQLPLPLPSTIL-KSAQVP 300
           AANKELSFNYTPKPAEEVPIPIPATVGGVR  ESE+S  D+E LPLPLPSTIL  S QV 
Sbjct: 241 AANKELSFNYTPKPAEEVPIPIPATVGGVRTLESERSSSDME-LPLPLPSTILTSSGQVT 300

[Close]

BLAST of Lsi03G012890 vs. NCBI nr
Match: gi|449446772|ref|XP_004141145.1| (PREDICTED: thioredoxin-like 1-1, chloroplastic [Cucumis sativus])

HSP 1 Score: 490.0 bits (1260), Expect = 3.0e-135
Identity = 258/313 (82.43%), Postives = 269/313 (85.94%), Query Frame = 1


Query: 1   MADAISKIAF-APFPRSSLSPCR-LHHLPPPSFGLKSAYSSSH----QRLSVKLPSTSRP 60
           MADA+SKIAF APFP SS S  R LH L  P    KS  SSSH    +R+SVKLPSTS P
Sbjct: 1   MADALSKIAFLAPFPPSSSSSHRHLHRLSLPFSEFKSVDSSSHPFNWKRISVKLPSTSGP 60

Query: 61  FSSSHSYGRIIQFTEAWCFSRNSVAPARSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGA 120
           FSSS+SYGR I+ TE     RNSV+P RSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGA
Sbjct: 61  FSSSYSYGRRIESTE-----RNSVSPPRSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGA 120

Query: 121 HDLVDSLLNAGDKLVIVDFYSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYS 180
           HD VDSLLNAGDKLVIVDF+SPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYS
Sbjct: 121 HDFVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYS 180

Query: 181 LGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVAL 240
           LGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDL AL
Sbjct: 181 LGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLAAL 240

Query: 241 AANKELSFNYTPKPAEEV------PIPIPATVGGVRISESEQSHLDLEQLPLPLPSTILK 300
           AANKELSF+YTPKPAEEV      PIPIPATVGGVR SESE+S  D+ QLPLPL STILK
Sbjct: 241 AANKELSFDYTPKPAEEVPISIAIPIPIPATVGGVRTSESERSRSDVGQLPLPLSSTILK 300

[Close]

BLAST of Lsi03G012890 vs. NCBI nr
Match: gi|659130756|ref|XP_008465334.1| (PREDICTED: thioredoxin-like 1-1, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 372.1 bits (954), Expect = 9.2e-100
Identity = 182/194 (93.81%), Postives = 185/194 (95.36%), Query Frame = 1


Query: 108 MKEVTGAHDLVDSLLNAGDKLVIVDFYSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEE 167
           MKEVTGAHDLVDSLLNAGDKLVIVDF+SPGCGGCKALHPKICQFAEMYPDIQFLQVNYEE
Sbjct: 1   MKEVTGAHDLVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEE 60

Query: 168 HKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLE 227
           HKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLE
Sbjct: 61  HKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLE 120

Query: 228 EKDLVALAANKELSFNYTPKPAEEVPIPIPATVGGVRISESEQSHLDLEQLPLPLPSTIL 287
           EKDLVALAANKELSFNYTPKPAEEVPIPIPATVGGVR  ESE+S  D+E LPLPLPSTIL
Sbjct: 121 EKDLVALAANKELSFNYTPKPAEEVPIPIPATVGGVRTLESERSSSDME-LPLPLPSTIL 180

Query: 288 -KSAQVPKENAYAG 301
             S QV KENAYAG
Sbjct: 181 TSSGQVTKENAYAG 193

[Close]

BLAST of Lsi03G012890 vs. NCBI nr
Match: gi|645270403|ref|XP_008240443.1| (PREDICTED: thioredoxin-like 1-1, chloroplastic isoform X2 [Prunus mume])

HSP 1 Score: 326.6 bits (836), Expect = 4.4e-86
Identity = 164/237 (69.20%), Postives = 180/237 (75.95%), Query Frame = 1


Query: 56  SSSHSYGRIIQFTEAWCFSRNSVAPARSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGAH 115
           S  H  G  +Q   A     N  + A S   S +G R  KA KWWEKG QPNMKEVT A 
Sbjct: 58  SDFHGKGVALQEHRAMPSRGNFQSQAASVVNSLTGLRFGKALKWWEKGNQPNMKEVTSAQ 117

Query: 116 DLVDSLLNAGDKLVIVDFYSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYSL 175
           DLVDSL NAGDKLV+VDF+SPGCGGCKALHPKICQ AEM PD+QFLQVNYEEHKSMCYSL
Sbjct: 118 DLVDSLSNAGDKLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEHKSMCYSL 177

Query: 176 GVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALA 235
            VHVLPFFRFYRGA GRLCSFSCTNATIKKF+DALAKH  DRCSLGPT+GLEEK+L+ALA
Sbjct: 178 NVHVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHKPDRCSLGPTKGLEEKELLALA 237

Query: 236 ANKELSFNYTPKPAEEVPIPIPATVGGVRISESEQSHLDLEQLPLPLPSTILKSAQV 293
           ANK++SFNYTPKP E VP P    +    +SE+  S L+ E LPLP   T  KSAQV
Sbjct: 238 ANKDISFNYTPKPVEAVPTPAKEVI----VSEAAPSRLNSEALPLP-SMTTSKSAQV 289

[Close]

BLAST of Lsi03G012890 vs. NCBI nr
Match: gi|595806031|ref|XP_007202384.1| (hypothetical protein PRUPE_ppa009372mg [Prunus persica])

HSP 1 Score: 326.6 bits (836), Expect = 4.4e-86
Identity = 164/237 (69.20%), Postives = 180/237 (75.95%), Query Frame = 1


Query: 56  SSSHSYGRIIQFTEAWCFSRNSVAPARSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGAH 115
           S  H  G  +Q   A     N  + A S   S +G R  KA KWWEKG QPNMKEVT A 
Sbjct: 58  SDFHGKGFALQEHRAMPSRGNFQSQAASVVNSLTGLRFGKALKWWEKGNQPNMKEVTSAQ 117

Query: 116 DLVDSLLNAGDKLVIVDFYSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYSL 175
           DLVDSL NAGDKLV+VDF+SPGCGGCKALHPKICQ AEM PD+QFLQVNYEEHKSMCYSL
Sbjct: 118 DLVDSLSNAGDKLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEHKSMCYSL 177

Query: 176 GVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALA 235
            VHVLPFFRFYRGA GRLCSFSCTNATIKKF+DALAKH  DRCSLGPT+GLEEK+L+ALA
Sbjct: 178 NVHVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHKPDRCSLGPTKGLEEKELLALA 237

Query: 236 ANKELSFNYTPKPAEEVPIPIPATVGGVRISESEQSHLDLEQLPLPLPSTILKSAQV 293
           ANK++SFNYTPKP E VP P    +    +SE+  S L+ E LPLP   T  KSAQV
Sbjct: 238 ANKDISFNYTPKPVEAVPTPAKEVI----VSEAAPSRLNSEALPLP-SMTTSKSAQV 289

The following BLAST results are available for this feature:

BLAST of Lsi03G012890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TRL11_ARATH	1.5e-81	58.11	Thioredoxin-like 1-1, chloroplastic OS=Arabidopsis thaliana GN=At1g08570 PE=2 SV...	[more]
TRL12_ORYSJ	3.2e-76	76.54	Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0326...	[more]
TRL11_ORYSJ	7.6e-70	65.48	Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0684...	[more]
TRL13_ARATH	8.7e-66	71.43	Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana GN=At2g33270 PE=2 SV...	[more]
TRL12_ARATH	4.3e-57	59.06	Thioredoxin-like 1-2, chloroplastic OS=Arabidopsis thaliana GN=At5g61440 PE=2 SV...	[more]

BLAST of Lsi03G012890 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LD91_CUCSA	2.1e-135	82.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G844860 PE=4 SV=1	[more]
M5W2V2_PRUPE	3.1e-86	69.20	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009372mg PE=4 SV=1	[more]
B9IPM3_POPTR	2.6e-85	65.98	Thioredoxin-like 7 family protein OS=Populus trichocarpa GN=POPTR_0019s04750g PE...	[more]
M5VQP2_PRUPE	3.4e-85	68.91	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009372mg PE=4 SV=1	[more]
V4U353_9ROSI	7.6e-85	64.39	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021469mg PE=4 SV=1	[more]

BLAST of Lsi03G012890 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08570.1	8.3e-83	58.11	atypical CYS HIS rich thioredoxin 4	[more]
AT2G33270.1	4.9e-67	71.43	atypical CYS HIS rich thioredoxin 3	[more]
AT5G61440.1	2.4e-58	59.06	atypical CYS HIS rich thioredoxin 5	[more]
AT4G26160.1	5.0e-35	50.00	atypical CYS HIS rich thioredoxin 1	[more]
AT4G29670.2	1.1e-29	39.68	atypical CYS HIS rich thioredoxin 2	[more]

BLAST of Lsi03G012890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130754\|ref\|XP_008465333.1\|	1.7e-138	84.69	PREDICTED: thioredoxin-like 1-1, chloroplastic isoform X1 [Cucumis melo]	[more]
gi\|449446772\|ref\|XP_004141145.1\|	3.0e-135	82.43	PREDICTED: thioredoxin-like 1-1, chloroplastic [Cucumis sativus]	[more]
gi\|659130756\|ref\|XP_008465334.1\|	9.2e-100	93.81	PREDICTED: thioredoxin-like 1-1, chloroplastic isoform X2 [Cucumis melo]	[more]
gi\|645270403\|ref\|XP_008240443.1\|	4.4e-86	69.20	PREDICTED: thioredoxin-like 1-1, chloroplastic isoform X2 [Prunus mume]	[more]
gi\|595806031\|ref\|XP_007202384.1\|	4.4e-86	69.20	hypothetical protein PRUPE_ppa009372mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis
GO:0006662	glycerol ether metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR013766	Thioredoxin_domain
IPR012336	Thioredoxin-like_fold
IPR005746	Thioredoxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0034599	cellular response to oxidative stress
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006457	protein folding
biological_process	GO:0000103	sulfate assimilation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005623	cell
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G012890.1	Lsi03G012890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005746	Thioredoxin	PANTHER	PTHR10438	THIOREDOXIN	coord: 38..238 score: 5.7E
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 95..212 score: 2.6
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 97..214 score: 9.2
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 120..192 score: 5.1
IPR013766	Thioredoxin domain	PROFILE	PS51352	THIOREDOXIN_2	coord: 97..215 score: 10
None	No IPR available	PANTHER	PTHR10438:SF245	THIOREDOXIN-LIKE 1-1, CHLOROPLASTIC-RELATED	coord: 38..238 score: 5.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G012890	Csa3G844860	Cucumber (Chinese Long) v2	culsiB186
Lsi03G012890	CSPI03G40870	Wild cucumber (PI 183967)	cpilsiB184
Lsi03G012890	Cucsa.340610	Cucumber (Gy14) v1	cgylsiB551
Lsi03G012890	CmaCh14G010890	Cucurbita maxima (Rimu)	cmalsiB240
Lsi03G012890	CmaCh06G017380	Cucurbita maxima (Rimu)	cmalsiB755
Lsi03G012890	CmoCh14G011530	Cucurbita moschata (Rifu)	cmolsiB231
Lsi03G012890	CmoCh06G017250	Cucurbita moschata (Rifu)	cmolsiB748
Lsi03G012890	Cla017180	Watermelon (97103) v1	lsiwmB240
Lsi03G012890	MELO3C026897	Melon (DHL92) v3.5.1	lsimeB260
Lsi03G012890	ClCG10G013280	Watermelon (Charleston Gray)	lsiwcgB219
Lsi03G012890	MELO3C026897.2	Melon (DHL92) v3.6.1	lsimedB273
Lsi03G012890	Cla97C10G196080	Watermelon (97103) v2	lsiwmbB218
Lsi03G012890	Cp4.1LG08g06650	Cucurbita pepo (Zucchini)	cpelsiB709
Lsi03G012890	Cp4.1LG03g09270	Cucurbita pepo (Zucchini)	cpelsiB500
Lsi03G012890	CsGy3G038320	Cucumber (Gy14) v2	cgyblsiB171
Lsi03G012890	Carg23335	Silver-seed gourd	carlsiB249
Lsi03G012890	CsaV3_3G043360	Cucumber (Chinese Long) v3	cuclsiB203

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G012890	Cucurbita moschata (Rifu)	cmolsiB228
Lsi03G012890	Cucurbita pepo (Zucchini)	cpelsiB504
Lsi03G012890	Wax gourd	lsiwgoB292