Cp4.1LG08g06650 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g06650
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Thioredoxin, putative
Location	Cp4.1LG08 : 138050 .. 140931 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGACTAAAGCATGATTTTTTTCAAAGAAAGTTTGAATTTTAGAGGCAAGGAATATATAGATGTGGTCAATGGCTTCGTCTGCACTTTCACTTTTTGTGACCACAAAACCCGAAATCAATGCGACGTTGCGTGCGCCTCTTATCCACTCGCAATTCCCCACAATCCTCGTTGTTGTTCGCCCAACCGCTCCGCCTTTCATTCCCATTCCTTCCCCTACAAACGCCTCGCCTCCCTTCCCCCTCGTCTTCTTCAATTCATGACAACGCCCCCTTTTCGATCCCGATCATCTCGTTCTTCAATATCCTATACAATCATCTTATCCCCACTTCAATTTCCCACAATTTCCCACCAACCCCACTTCCCAATTCCTCTTACCCTCTTCAATCCAAGCGATTTCAAGAGATTTGTCCTCGATTTTAATGGCCGACGCTCTCAGCAAGATCAGTTTTTCCCCCTCCCGCCCTTCCTTTTCTCCTCACCATCTTCCTCCGCCGATTTATGGCCTTAAATCTGTCATTTCTTCTTCGAATCCCTCGACTTGGAAACGGCTTTCTCTGAAATTACCATCCGCTTCGCTGTCTTTTTCGAGCCGTGACTCCTATGGCGGAAGAATTGAGTTTAGAGAAGCTAAGGGCATCTCCAGGAATTCTACTTCTCCTACACGGTCTTCGACGATATCCCATGTTGGTACCTGTATTCTTCACATCCTTGTGTTTTTTTCCCTTTCCTATGATATTAAGGTTTTTGTTTCTAACATTCAGCTTTTTCTGTCATTTTATTATATGTTTCCCCTCGTTGGATTTTCTTTATAAATTTATTTGTCTCATTAGGTTCTCTGTGTTTCATTTTATTGGATTCTGAATGGGAAACTTAGCTGTGTCTTGTTGTTTGTGATCTGGGTTACTATGAACAGAACTAGTTACTGTATCCCTATGTTTGCTTATCCTTGATTAGCACTTGATTATGTCCGTAATCTATTGTCCATTTTGTTTGTTAACTCTTGTGTTGGTGTTTAATAGAGTGGGTTTCGAACTCCAAAAGCTCAGAAATGGTGGGAAAAGGGGTTAGAAGCTAATATGAAAGAGGTGAGCAGTGCACAGGAGCTTGTGGATTCTCTTTTAAATGCCGGGGACAAGCTTGTTATTGTGGATTTCTTCTCCCCTGGTTGTGGTGGCTGCAAAGCTCTTCACCCAAAGGTCTCCTTTATGCTTTATTGTGTAGAAAGAACAATGTGTATGTTCCAAGTTTTACAAGTCTTGAAAAGGTTCGTATATCTATCCTCTGCAGATATGCCAATTTGCTGAGATGAATCCAGAAATCCAATTTTTGCAAGTGAACTATGAAGAGCACAAATCTATGTGTTATAGTCTTGGTGTGCATGTGTTGCCCTTCTTTCGCTTCTACAGAGGTGCTCAGGGTCGTGTTTGCAGCTTTAGCTGTACTAATGCAACGGTAACAAATCTTTAAATACATTGGAACTCTTCTGCTTTTGTAATGTTATCCTATCATTATCATTCATAATATTGATTGTGGCTGTACATTCTTTTATAGAAGCATGCTATTCCTTTATTTCCATTTTAATTGTCATTTAATCAGAAGTGAGATCCCACGTCGGTTGGAGTGGGAAACAAAACATTCTTTATAAGGGTGTGGAAACCTCTCCTAGCAGACGCGTTTTAAAACTGTGAGGTTGACGGCGATACGTAATGGGCCAAAGCGGACAATATCTATTAGCGGTGAGTTTAGGTTGTTACAAATGGTATTAGAGCCAGACACTAGATGGTGCGCCAGCGAGAACGGTGGGTCCCGAAAGGGGGTGGATTGTGAGATCCTACATCGGTTGGAGAGAGGAACGAAACATTATTTATAAAGGTGTGGAAACCTCTCCCTAGCATACGCAGTTTAAAGCCGTGAGGCTAACGGGCCAAAGCGGACGATATCTGATGGGTTTAGGTTGTTATAATTTTAGTCGAAGTAGATATGTTTGTGCTTTAAGTATCAAATCTCCTATTGTGGTTTATTTGCCAAGAGATGTCCATTTAACCGGCCCGGTAGAGAATCTCCGCTTAAACATAGAATGGGGGAGGGAGGGAGAGATATTTCTCCCTCTTGATTAAATGGGGCCTATGACAGAGATTATGTTTCCCATCCCTAATGAGAATTTTGCGGGGATGGAGATGGAAATAGTACAGACGTCTCTATGTCTCTTCTACATCTGCCTCATGAGTATCAAATGTGTGCTTTGTCTCTACTAGTTTACGTGTTATTGTAGATGGTAGAGTGATAAAAAATTGGTTTGGTATGACAGATGAAGAAATTCAAGGATGCATTAGCCAAGCACAACACAGACCGATGCAGCCTCGGCCCGACCCGAGGGTTGGAGGAGAAAGAACTCATGGCACTTGCCGCTAACAGAGAACTCTGTTTCAACTACACCCCAAAAGCAGCAGAAGAGGTCCCTATCCCCATCACCATCCATGCCCGTGCCCATGCTGGAAGTGTAAAAATATCAGAATCAGAGCCATCGCGTCTTCCTCTACCCTCAACCATCCTGAAGTCTGCTGCTCAAACCTCCAAGGGCAATGCCTATGTGGGATGAAGCATCCTATCCTATCCTTAATACCTGTGCTCTTCTTGCCTGTAAAGATAAAATAGATGCACCAAATTTGTAGGGTTTTCTTTTTTGGCTTGGATCCCTACCTCTGCTGTGTGATTAATATTTATACATATATAGTCTTACCCGTTGTCTCTCCACGGTTGTATAAACCTTCTCTGCAAAGTTATGAATACAGAGCTTGTGAAAGATTGTAATTACTCAAATAATCAAGAAACTTATGAGTACCACTCATATGATTCAATGATATCAACTTCTTTAACCAC

mRNA sequence

ATTGACTAAAGCATGATTTTTTTCAAAGAAAGTTTGAATTTTAGAGGCAAGGAATATATAGATGTGGTCAATGGCTTCGTCTGCACTTTCACTTTTTGTGACCACAAAACCCGAAATCAATGCGACGTTGCGTGCGCCTCTTATCCACTCGCAATTCCCCACAATCCTCGTTGTTGTTCGCCCAACCGCTCCGCCTTTCATTCCCATTCCTTCCCCTACAAACGCCTCGCCTCCCTTCCCCCTCGTCTTCTTCAATTCATGACAACGCCCCCTTTTCGATCCCGATCATCTCGTTCTTCAATATCCTATACAATCATCTTATCCCCACTTCAATTTCCCACAATTTCCCACCAACCCCACTTCCCAATTCCTCTTACCCTCTTCAATCCAAGCGATTTCAAGAGATTTGTCCTCGATTTTAATGGCCGACGCTCTCAGCAAGATCAGTTTTTCCCCCTCCCGCCCTTCCTTTTCTCCTCACCATCTTCCTCCGCCGATTTATGGCCTTAAATCTGTCATTTCTTCTTCGAATCCCTCGACTTGGAAACGGCTTTCTCTGAAATTACCATCCGCTTCGCTGTCTTTTTCGAGCCGTGACTCCTATGGCGGAAGAATTGAGTTTAGAGAAGCTAAGGGCATCTCCAGGAATTCTACTTCTCCTACACGGTCTTCGACGATATCCCATAGTGGGTTTCGAACTCCAAAAGCTCAGAAATGGTGGGAAAAGGGGTTAGAAGCTAATATGAAAGAGGTGAGCAGTGCACAGGAGCTTGTGGATTCTCTTTTAAATGCCGGGGACAAGCTTGTTATTGTGGATTTCTTCTCCCCTGGTTGTGGTGGCTGCAAAGCTCTTCACCCAAAGATATGCCAATTTGCTGAGATGAATCCAGAAATCCAATTTTTGCAAGTGAACTATGAAGAGCACAAATCTATGTGTTATAGTCTTGGTGTGCATGTGTTGCCCTTCTTTCGCTTCTACAGAGGTGCTCAGGGTCGTGTTTGCAGCTTTAGCTGTACTAATGCAACGATGAAGAAATTCAAGGATGCATTAGCCAAGCACAACACAGACCGATGCAGCCTCGGCCCGACCCGAGGGTTGGAGGAGAAAGAACTCATGGCACTTGCCGCTAACAGAGAACTCTGTTTCAACTACACCCCAAAAGCAGCAGAAGAGGTCCCTATCCCCATCACCATCCATGCCCGTGCCCATGCTGGAAGTGTAAAAATATCAGAATCAGAGCCATCGCGTCTTCCTCTACCCTCAACCATCCTGAAGTCTGCTGCTCAAACCTCCAAGGGCAATGCCTATGTGGGATGAAGCATCCTATCCTATCCTTAATACCTGTGCTCTTCTTGCCTGTAAAGATAAAATAGATGCACCAAATTTGTAGGGTTTTCTTTTTTGGCTTGGATCCCTACCTCTGCTGTGTGATTAATATTTATACATATATAGTCTTACCCGTTGTCTCTCCACGGTTGTATAAACCTTCTCTGCAAAGTTATGAATACAGAGCTTGTGAAAGATTGTAATTACTCAAATAATCAAGAAACTTATGAGTACCACTCATATGATTCAATGATATCAACTTCTTTAACCAC

Coding sequence (CDS)

ATGGCCGACGCTCTCAGCAAGATCAGTTTTTCCCCCTCCCGCCCTTCCTTTTCTCCTCACCATCTTCCTCCGCCGATTTATGGCCTTAAATCTGTCATTTCTTCTTCGAATCCCTCGACTTGGAAACGGCTTTCTCTGAAATTACCATCCGCTTCGCTGTCTTTTTCGAGCCGTGACTCCTATGGCGGAAGAATTGAGTTTAGAGAAGCTAAGGGCATCTCCAGGAATTCTACTTCTCCTACACGGTCTTCGACGATATCCCATAGTGGGTTTCGAACTCCAAAAGCTCAGAAATGGTGGGAAAAGGGGTTAGAAGCTAATATGAAAGAGGTGAGCAGTGCACAGGAGCTTGTGGATTCTCTTTTAAATGCCGGGGACAAGCTTGTTATTGTGGATTTCTTCTCCCCTGGTTGTGGTGGCTGCAAAGCTCTTCACCCAAAGATATGCCAATTTGCTGAGATGAATCCAGAAATCCAATTTTTGCAAGTGAACTATGAAGAGCACAAATCTATGTGTTATAGTCTTGGTGTGCATGTGTTGCCCTTCTTTCGCTTCTACAGAGGTGCTCAGGGTCGTGTTTGCAGCTTTAGCTGTACTAATGCAACGATGAAGAAATTCAAGGATGCATTAGCCAAGCACAACACAGACCGATGCAGCCTCGGCCCGACCCGAGGGTTGGAGGAGAAAGAACTCATGGCACTTGCCGCTAACAGAGAACTCTGTTTCAACTACACCCCAAAAGCAGCAGAAGAGGTCCCTATCCCCATCACCATCCATGCCCGTGCCCATGCTGGAAGTGTAAAAATATCAGAATCAGAGCCATCGCGTCTTCCTCTACCCTCAACCATCCTGAAGTCTGCTGCTCAAACCTCCAAGGGCAATGCCTATGTGGGATGA

Protein sequence

MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDSYGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMALAANRELCFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTILKSAAQTSKGNAYVG

Homology

[Close]

BLAST of Cp4.1LG08g06650 vs. Swiss-Prot
Match: TRL11_ARATH (Thioredoxin-like 1-1, chloroplastic OS=Arabidopsis thaliana GN=At1g08570 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.2e-80
Identity = 160/254 (62.99%), Postives = 189/254 (74.41%), Query Frame = 1


Query: 35  SSNPSTWKRLSLKLPSASLSFSSRDS-----YGGRIEFREAKGIS-RNSTSPTRSSTISH 94
           S +P ++    LK   + L   S+       YG +I F +++  S R S++ T  +T+  
Sbjct: 25  SFSPVSFGGFGLKKSFSCLKLKSQKPLRSVFYGKQIVFGDSQDESFRRSSAITAQTTL-- 84

Query: 95  SGFRTPKAQKWWEKGLEANMKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKI 154
              R   AQKWWEKGL+ NM+E+SSAQELVDSL NAGDKLV+VDFFSPGCGGCKALHPKI
Sbjct: 85  ---RIGTAQKWWEKGLKDNMREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKI 144

Query: 155 CQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKD 214
           CQFAEMNP++QFLQVNYEEHKSMCYSLGVHVLPFFRFYRG+QGRVCSFSCTNAT+KKF+D
Sbjct: 145 CQFAEMNPDVQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIKKFRD 204

Query: 215 ALAKHNTDRCSLGPTRGLEEKELMALAANRELCFNYTPKAAEEVPIPITIHARAHAGSVK 274
           ALAKH  DRCSLGPT+GLEEKEL+ALAAN+EL F YTPK     P+P+   A        
Sbjct: 205 ALAKHGPDRCSLGPTKGLEEKELVALAANKELNFTYTPK-----PVPVEKEAAT------ 261

Query: 275 ISESEPS-RLPLPS 282
             +S PS  +PLPS
Sbjct: 265 -PDSNPSLPVPLPS 261

[Close]

BLAST of Cp4.1LG08g06650 vs. Swiss-Prot
Match: TRL12_ORYSJ (Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0326500 PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 3.0e-74
Identity = 144/232 (62.07%), Postives = 171/232 (73.71%), Query Frame = 1


Query: 43  RLSLKLPSASLSFSSRDSYGGR---IEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKW 102
           R++    +++L    R  + GR   +  R ++ + RN  +P + +          KA KW
Sbjct: 34  RMAAAAATSALRIGRRSPFLGRRLAVGPRRSRPVPRNLVAPVQMN------LAFAKATKW 93

Query: 103 WEKGLEANMKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQ 162
           WEKGL+ NM+EV SAQ+LVDSL NAGD LVIVDFFSPGCGGC+ALHPKICQ AE NP++ 
Sbjct: 94  WEKGLQPNMREVESAQDLVDSLTNAGDNLVIVDFFSPGCGGCRALHPKICQIAEQNPDVL 153

Query: 163 FLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCS 222
           FLQVNYEEHKSMCYSL VHVLPFFRFYRGAQGR+CSFSCTNAT+KKF+DALAKH  DRCS
Sbjct: 154 FLQVNYEEHKSMCYSLHVHVLPFFRFYRGAQGRLCSFSCTNATIKKFRDALAKHKPDRCS 213

Query: 223 LGPTRGLEEKELMALAANRELCFNYTPKAAEEVPIPITIHAR-AHAGSVKIS 271
           LGPTRGLEE EL+ALAAN++L FNYT K  E VP      A+    GS K+S
Sbjct: 214 LGPTRGLEESELLALAANKDLQFNYT-KKPELVPSGDAAAAQELDRGSTKLS 258

[Close]

BLAST of Cp4.1LG08g06650 vs. Swiss-Prot
Match: TRL11_ORYSJ (Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0684100 PE=2 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.3e-69
Identity = 141/243 (58.02%), Postives = 170/243 (69.96%), Query Frame = 1


Query: 55  FSSRDSY-GGRIEF--REAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEV 114
           +SS+ ++  GR+    R+A+ + RN  +      ++       KA +WWEK L+ NM+E+
Sbjct: 44  YSSKSTFPSGRVALTERKARPLPRNLEAAHGQMNLTIG-----KAMRWWEKCLQPNMREI 103

Query: 115 SSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSM 174
            SAQ+L DSLLNAGDKLV+VDFFSPGCGGC+ALHPKI Q AE NPE+ FLQVNYE+HKSM
Sbjct: 104 ESAQDLADSLLNAGDKLVVVDFFSPGCGGCRALHPKIAQLAEKNPEVLFLQVNYEKHKSM 163

Query: 175 CYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKEL 234
           CYSL VHVLPFFRFYRGAQGRV SFSCTNAT+KKFKDALAKH  DRC LGP +GLEE EL
Sbjct: 164 CYSLHVHVLPFFRFYRGAQGRVSSFSCTNATIKKFKDALAKHGPDRCGLGPAKGLEESEL 223

Query: 235 MALAANRELCFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTILKSAAQTS 294
           MALA NR+L F YTP   + VPI   +   A A            LPLP+T  +   Q S
Sbjct: 224 MALAINRDLNFTYTPN-QDLVPIADALLKEAAAPG-------GPWLPLPATATQLFIQGS 273

[Close]

BLAST of Cp4.1LG08g06650 vs. Swiss-Prot
Match: TRL13_ARATH (Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana GN=At2g33270 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 5.6e-65
Identity = 109/156 (69.87%), Postives = 134/156 (85.90%), Query Frame = 1


Query: 97  QKWWEKGLEANMKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNP 156
           QKWWEK L+ NMK V+S Q+LV SL NAGDKLV+VDFFSP CGGCKALHPKIC+ AE NP
Sbjct: 84  QKWWEKELKPNMKSVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKIAEKNP 143

Query: 157 EIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTD 216
           E++FLQVNYEEH+S+C SL +HVLPFFRFYRG+ GRVCSFSCTNAT++KFK+AL KH  +
Sbjct: 144 EVEFLQVNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTNATIRKFKEALEKHGRE 203

Query: 217 RCSLGPTRGLEEKELMALAANRELCFNYTPKAAEEV 253
           +CS+G T+GLEEKEL+A+AAN++L F+Y P +   +
Sbjct: 204 QCSIGETKGLEEKELVAMAANKDLSFDYKPTSCGNI 239

[Close]

BLAST of Cp4.1LG08g06650 vs. Swiss-Prot
Match: TRL12_ARATH (Thioredoxin-like 1-2, chloroplastic OS=Arabidopsis thaliana GN=At5g61440 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.1e-56
Identity = 111/218 (50.92%), Postives = 145/218 (66.51%), Query Frame = 1


Query: 28  GLKSVISSSNPSTWKRLSLKLPSASLSFSSRDSYGGRIEF--REAKGISRNSTSPTRSST 87
           G   V+S  +P + +  S    S  +S   ++      +F  +     S +S SP ++ T
Sbjct: 8   GTNCVLSGVSPFSQENQSKSKLSPFMSLDLKEHPMASADFTNQTLTAFSSSSASPFQAKT 67

Query: 88  ISHSGFRTPKAQKWWEKGLEANMKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALH 147
              S     +  +WWEK    NM E+ SA  LVDSLLNAGD+LV++DF+SPGCGGCK+LH
Sbjct: 68  ---SSIGMSRGMRWWEKSTNHNMLEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLH 127

Query: 148 PKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKK 207
           PKICQ AE NP + FL+VN EE ++MC+ L VHVLPFF+FYRGA+G+VCSFSCT AT+ K
Sbjct: 128 PKICQLAETNPNVMFLKVNQEELRTMCHGLNVHVLPFFKFYRGAEGKVCSFSCTIATINK 187

Query: 208 FKDALAKHNTDRCSLGPTRGLEEKELMALAANRELCFN 244
           FK AL KH ++RCSLG  +GL+EKEL ALA+  EL  N
Sbjct: 188 FKKALDKHGSERCSLGDAKGLDEKELAALASVGELKMN 222

[Close]

BLAST of Cp4.1LG08g06650 vs. TrEMBL
Match: A0A0A0LD91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G844860 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 2.7e-114
Identity = 227/313 (72.52%), Postives = 244/313 (77.96%), Query Frame = 1


Query: 1   MADALSKISF-SPSRPSFSP-----HHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLS 60
           MADALSKI+F +P  PS S      H L  P    KSV SSS+P  WKR+S+KLPS S  
Sbjct: 1   MADALSKIAFLAPFPPSSSSSHRHLHRLSLPFSEFKSVDSSSHPFNWKRISVKLPSTSGP 60

Query: 61  FSSRDSYGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSA 120
           FSS  SYG RIE  E     RNS SP RSSTISHSGFR PKAQKWWEKGL+ NMKEV+ A
Sbjct: 61  FSSSYSYGRRIESTE-----RNSVSPPRSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGA 120

Query: 121 QELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYS 180
            + VDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEM P+IQFLQVNYEEHKSMCYS
Sbjct: 121 HDFVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYS 180

Query: 181 LGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMAL 240
           LGVHVLPFFRFYRGAQGR+CSFSCTNAT+KKFKDALAKHNTDRCSLGPT+GLEEK+L AL
Sbjct: 181 LGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLAAL 240

Query: 241 AANRELCFNYTPKAAEEVPIPIT--IHARAHAGSVKISESEPSR-------LPLPSTILK 299
           AAN+EL F+YTPK AEEVPI I   I   A  G V+ SESE SR       LPL STILK
Sbjct: 241 AANKELSFDYTPKPAEEVPISIAIPIPIPATVGGVRTSESERSRSDVGQLPLPLSSTILK 300

[Close]

BLAST of Cp4.1LG08g06650 vs. TrEMBL
Match: M5W2V2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009372mg PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.0e-81
Identity = 171/297 (57.58%), Postives = 203/297 (68.35%), Query Frame = 1


Query: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS 60
           MA+ LSK S   S    +  +    ++  KS   + + S    L L    +SLS S++  
Sbjct: 1   MAEVLSKTSLFSSWHHHNRQNQSISVFP-KSCNYNKSGSFCCSLKLNPEISSLSLSTKSD 60

Query: 61  YGGR---IEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAQEL 120
           + G+   ++   A     N  S   S   S +G R  KA KWWEKG + NMKEV+SAQ+L
Sbjct: 61  FHGKGFALQEHRAMPSRGNFQSQAASVVNSLTGLRFGKALKWWEKGNQPNMKEVTSAQDL 120

Query: 121 VDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGV 180
           VDSL NAGDKLV+VDFFSPGCGGCKALHPKICQ AEMNP++QFLQVNYEEHKSMCYSL V
Sbjct: 121 VDSLSNAGDKLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEHKSMCYSLNV 180

Query: 181 HVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMALAAN 240
           HVLPFFRFYRGA GR+CSFSCTNAT+KKF+DALAKH  DRCSLGPT+GLEEKEL+ALAAN
Sbjct: 181 HVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHKPDRCSLGPTKGLEEKELLALAAN 240

Query: 241 RELCFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSR-----LPLPSTILKSAAQ 290
           +++ FNYTPK  E VP P        A  V +SE+ PSR     LPLPS     +AQ
Sbjct: 241 KDISFNYTPKPVEAVPTP--------AKEVIVSEAAPSRLNSEALPLPSMTTSKSAQ 288

[Close]

BLAST of Cp4.1LG08g06650 vs. TrEMBL
Match: M5VQP2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009372mg PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 2.3e-81
Identity = 168/298 (56.38%), Postives = 207/298 (69.46%), Query Frame = 1


Query: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS 60
           MA+ LSK S   S    +  +    ++  KS   + + S    L L    +SLS S++  
Sbjct: 1   MAEVLSKTSLFSSWHHHNRQNQSISVFP-KSCNYNKSGSFCCSLKLNPEISSLSLSTKSD 60

Query: 61  YGGR-IEFREAKGISRNSTSPTRSSTISHS---GFRTPKAQKWWEKGLEANMKEVSSAQE 120
           + G+    +E + +       ++++++ +S   G R  KA KWWEKG + NMKEV+SAQ+
Sbjct: 61  FHGKGFALQEHRAMPSRGNFQSQAASVVNSLQTGLRFGKALKWWEKGNQPNMKEVTSAQD 120

Query: 121 LVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLG 180
           LVDSL NAGDKLV+VDFFSPGCGGCKALHPKICQ AEMNP++QFLQVNYEEHKSMCYSL 
Sbjct: 121 LVDSLSNAGDKLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEHKSMCYSLN 180

Query: 181 VHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMALAA 240
           VHVLPFFRFYRGA GR+CSFSCTNAT+KKF+DALAKH  DRCSLGPT+GLEEKEL+ALAA
Sbjct: 181 VHVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHKPDRCSLGPTKGLEEKELLALAA 240

Query: 241 NRELCFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSR-----LPLPSTILKSAAQ 290
           N+++ FNYTPK  E VP P        A  V +SE+ PSR     LPLPS     +AQ
Sbjct: 241 NKDISFNYTPKPVEAVPTP--------AKEVIVSEAAPSRLNSEALPLPSMTTSKSAQ 289

[Close]

BLAST of Cp4.1LG08g06650 vs. TrEMBL
Match: A0A0B2PKM6_GLYSO (Thioredoxin-like 1-1, chloroplastic OS=Glycine soja GN=glysoja_038206 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 8.7e-81
Identity = 168/291 (57.73%), Postives = 201/291 (69.07%), Query Frame = 1


Query: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSS---NPSTWKRLSLKLPSASL-SFS 60
           MA+ L+K S   S  S S H +    +   S +S++        K  SLK+ S  L S+S
Sbjct: 1   MAEVLTKASLVSSSSS-SWHGVGQRHHRRVSTVSNTCSFGSGVGKFSSLKMKSQVLRSWS 60

Query: 61  SRDSYGGR-IEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAQ 120
           S   + G+ + F   +G+     S  R+ST +   FR  K QKWWEKGL+ NMKEV+SAQ
Sbjct: 61  SSSEFQGKKLVFHVNRGLPNRVNSRLRASTGAQMSFRLGKVQKWWEKGLQPNMKEVTSAQ 120

Query: 121 ELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSL 180
           + VDSLL+AGDKLV+VDFFSPGCGGCKALHPKICQFAEMNP++QFLQVNYEEHKSMCYSL
Sbjct: 121 DFVDSLLSAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEEHKSMCYSL 180

Query: 181 GVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMALA 240
            VHVLPFFRFYRGA GR+CSFSCTNAT+KKFKDALAKH  DRCSLGPT+GLEEKEL+ALA
Sbjct: 181 NVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPDRCSLGPTKGLEEKELLALA 240

Query: 241 ANRELCFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTILKS 287
           AN++L F Y+P+  +        HA    G+          LP PS IL S
Sbjct: 241 ANKDLSFTYSPEPLQPA------HADEELGTEPAPAPGSKSLPSPSMILNS 284

[Close]

BLAST of Cp4.1LG08g06650 vs. TrEMBL
Match: A5AQX7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007145 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 8.7e-81
Identity = 170/301 (56.48%), Postives = 202/301 (67.11%), Query Frame = 1


Query: 1   MADALSKIS-FSPSRPSFSPHH-------LPPPIYGLKSVISSSNPSTWKRLSLK---LP 60
           MA  LSK S FSP       HH        P   YG     + ++   +  L LK   L 
Sbjct: 3   MAQILSKTSVFSPCHH----HHRRCCVSAFPNNDYGHHRSAAPASARGFPSLKLKHRNLR 62

Query: 61  SASLSFSSRDSYGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMK 120
           S S S S+ D +GGRI  +E   + +   +    + +   G    KAQKWWEKGL+ NMK
Sbjct: 63  SLSPSSSNSDFHGGRIVLQEIGSMPKRRNAQASCTLM---GLAIGKAQKWWEKGLQPNMK 122

Query: 121 EVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHK 180
           EV+ AQ+LVDSLLNAGDKLV+VDFFSPGCGGC+ALHPKICQ AEMNP+++FLQVNYEEHK
Sbjct: 123 EVTGAQDLVDSLLNAGDKLVVVDFFSPGCGGCRALHPKICQLAEMNPDVEFLQVNYEEHK 182

Query: 181 SMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEK 240
           SMCYSL VHVLPFFRFYRGA GR+CSFSCTNAT+KKFKDALAKH  DRCSL PT+GLEEK
Sbjct: 183 SMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPDRCSLEPTKGLEEK 242

Query: 241 ELMALAANRELCFNYTPK-----AAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTIL 286
           EL+AL+AN++  FNY+PK     A EE+ +  T  A      + +    P  LPLPST L
Sbjct: 243 ELLALSANKDFSFNYSPKPVPTPAQEEIAVEATSAAAXSNXELPLPLPLPLSLPLPSTSL 296

[Close]

BLAST of Cp4.1LG08g06650 vs. TAIR10
Match: AT1G08570.1 (AT1G08570.1 atypical CYS HIS rich thioredoxin 4)

HSP 1 Score: 301.2 bits (770), Expect = 7.0e-82
Identity = 160/254 (62.99%), Postives = 189/254 (74.41%), Query Frame = 1


Query: 35  SSNPSTWKRLSLKLPSASLSFSSRDS-----YGGRIEFREAKGIS-RNSTSPTRSSTISH 94
           S +P ++    LK   + L   S+       YG +I F +++  S R S++ T  +T+  
Sbjct: 25  SFSPVSFGGFGLKKSFSCLKLKSQKPLRSVFYGKQIVFGDSQDESFRRSSAITAQTTL-- 84

Query: 95  SGFRTPKAQKWWEKGLEANMKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKI 154
              R   AQKWWEKGL+ NM+E+SSAQELVDSL NAGDKLV+VDFFSPGCGGCKALHPKI
Sbjct: 85  ---RIGTAQKWWEKGLKDNMREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKI 144

Query: 155 CQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKD 214
           CQFAEMNP++QFLQVNYEEHKSMCYSLGVHVLPFFRFYRG+QGRVCSFSCTNAT+KKF+D
Sbjct: 145 CQFAEMNPDVQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIKKFRD 204

Query: 215 ALAKHNTDRCSLGPTRGLEEKELMALAANRELCFNYTPKAAEEVPIPITIHARAHAGSVK 274
           ALAKH  DRCSLGPT+GLEEKEL+ALAAN+EL F YTPK     P+P+   A        
Sbjct: 205 ALAKHGPDRCSLGPTKGLEEKELVALAANKELNFTYTPK-----PVPVEKEAAT------ 261

Query: 275 ISESEPS-RLPLPS 282
             +S PS  +PLPS
Sbjct: 265 -PDSNPSLPVPLPS 261

[Close]

BLAST of Cp4.1LG08g06650 vs. TAIR10
Match: AT2G33270.1 (AT2G33270.1 atypical CYS HIS rich thioredoxin 3)

HSP 1 Score: 249.2 bits (635), Expect = 3.2e-66
Identity = 109/156 (69.87%), Postives = 134/156 (85.90%), Query Frame = 1


Query: 97  QKWWEKGLEANMKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNP 156
           QKWWEK L+ NMK V+S Q+LV SL NAGDKLV+VDFFSP CGGCKALHPKIC+ AE NP
Sbjct: 84  QKWWEKELKPNMKSVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKIAEKNP 143

Query: 157 EIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTD 216
           E++FLQVNYEEH+S+C SL +HVLPFFRFYRG+ GRVCSFSCTNAT++KFK+AL KH  +
Sbjct: 144 EVEFLQVNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTNATIRKFKEALEKHGRE 203

Query: 217 RCSLGPTRGLEEKELMALAANRELCFNYTPKAAEEV 253
           +CS+G T+GLEEKEL+A+AAN++L F+Y P +   +
Sbjct: 204 QCSIGETKGLEEKELVAMAANKDLSFDYKPTSCGNI 239

[Close]

BLAST of Cp4.1LG08g06650 vs. TAIR10
Match: AT5G61440.1 (AT5G61440.1 atypical CYS HIS rich thioredoxin 5)

HSP 1 Score: 220.7 bits (561), Expect = 1.2e-57
Identity = 111/218 (50.92%), Postives = 145/218 (66.51%), Query Frame = 1


Query: 28  GLKSVISSSNPSTWKRLSLKLPSASLSFSSRDSYGGRIEF--REAKGISRNSTSPTRSST 87
           G   V+S  +P + +  S    S  +S   ++      +F  +     S +S SP ++ T
Sbjct: 8   GTNCVLSGVSPFSQENQSKSKLSPFMSLDLKEHPMASADFTNQTLTAFSSSSASPFQAKT 67

Query: 88  ISHSGFRTPKAQKWWEKGLEANMKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALH 147
              S     +  +WWEK    NM E+ SA  LVDSLLNAGD+LV++DF+SPGCGGCK+LH
Sbjct: 68  ---SSIGMSRGMRWWEKSTNHNMLEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLH 127

Query: 148 PKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKK 207
           PKICQ AE NP + FL+VN EE ++MC+ L VHVLPFF+FYRGA+G+VCSFSCT AT+ K
Sbjct: 128 PKICQLAETNPNVMFLKVNQEELRTMCHGLNVHVLPFFKFYRGAEGKVCSFSCTIATINK 187

Query: 208 FKDALAKHNTDRCSLGPTRGLEEKELMALAANRELCFN 244
           FK AL KH ++RCSLG  +GL+EKEL ALA+  EL  N
Sbjct: 188 FKKALDKHGSERCSLGDAKGLDEKELAALASVGELKMN 222

[Close]

BLAST of Cp4.1LG08g06650 vs. TAIR10
Match: AT4G26160.1 (AT4G26160.1 atypical CYS HIS rich thioredoxin 1)

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-33
Identity = 60/122 (49.18%), Postives = 91/122 (74.59%), Query Frame = 1


Query: 98  KWWEKGLEANMKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPE 157
           KWWE+    NM +++SA++ +++L +AGD+LVIVDF+   CG C+A+ PK+C+ A+ +P 
Sbjct: 85  KWWERKAGPNMIDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKEHPN 144

Query: 158 IQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDR 217
           I FL+VN++E+KS+C SL V VLP+F FYRGA G+V SFSC+ A  +K ++A+ +HN   
Sbjct: 145 ILFLKVNFDENKSLCKSLNVKVLPYFHFYRGADGQVESFSCSLAKFQKLREAIERHNVGS 204

Query: 218 CS 220
            S
Sbjct: 205 IS 206

[Close]

BLAST of Cp4.1LG08g06650 vs. TAIR10
Match: AT4G29670.2 (AT4G29670.2 atypical CYS HIS rich thioredoxin 2)

HSP 1 Score: 122.1 bits (305), Expect = 5.8e-28
Identity = 66/153 (43.14%), Postives = 93/153 (60.78%), Query Frame = 1


Query: 77  STSPTRSSTI--------SHSGFRTPKAQ----------------KWWEKGLEANMKEVS 136
           S+SP+ SS+         SH   R PK+Q                KWWE+    NM ++ 
Sbjct: 51  SSSPSCSSSHYHPSSGLGSHLPLRRPKSQVVRVKVDENVAETEPPKWWERNAP-NMVDIH 110

Query: 137 SAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMC 196
           S +E + +L  AG++LVIV+F+   C  C+AL PK+C+ A  +P+I FL+VN++E+K MC
Sbjct: 111 STEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVNFDENKPMC 170

Query: 197 YSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKK 206
            SL V VLPFF FYRGA G++ SFSC+ A +KK
Sbjct: 171 KSLNVRVLPFFHFYRGADGQLESFSCSLAKVKK 202

[Close]

BLAST of Cp4.1LG08g06650 vs. NCBI nr
Match: gi|659130754|ref|XP_008465333.1| (PREDICTED: thioredoxin-like 1-1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 424.9 bits (1091), Expect = 1.2e-115
Identity = 225/310 (72.58%), Postives = 247/310 (79.68%), Query Frame = 1


Query: 1   MADALSKISF-SPSRPSFSPHH-----LPPPIYGLKSVISSSNPSTWKRLSLKLPSASLS 60
           MADALSK++F +P  PS S  H     L  P  G KSV SSS+P  W+R+S+KLPS +  
Sbjct: 1   MADALSKVAFLAPFPPSSSYSHRHLHCLSLPFSGFKSVDSSSHPFNWQRISVKLPSTAGP 60

Query: 61  FSSRDSYGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSA 120
           FSS  +YG RIEF E     RNS SP RSSTISHSGFR PKAQKWWEKGL+ NMKEV+ A
Sbjct: 61  FSSSYAYGRRIEFTE-----RNSVSPPRSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGA 120

Query: 121 QELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYS 180
            +LVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEM P+IQFLQVNYEEHKSMCYS
Sbjct: 121 HDLVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYS 180

Query: 181 LGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMAL 240
           LGVHVLPFFRFYRGAQGR+CSFSCTNAT+KKFKDALAKHNTDRCSLGPT+GLEEK+L+AL
Sbjct: 181 LGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVAL 240

Query: 241 AANRELCFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSR------LPLPSTILKSAA 299
           AAN+EL FNYTPK AEEVPIPI     A  G V+  ESE S       LPLPSTIL S+ 
Sbjct: 241 AANKELSFNYTPKPAEEVPIPIP----ATVGGVRTLESERSSSDMELPLPLPSTILTSSG 300

[Close]

BLAST of Cp4.1LG08g06650 vs. NCBI nr
Match: gi|449446772|ref|XP_004141145.1| (PREDICTED: thioredoxin-like 1-1, chloroplastic [Cucumis sativus])

HSP 1 Score: 419.9 bits (1078), Expect = 3.8e-114
Identity = 227/313 (72.52%), Postives = 244/313 (77.96%), Query Frame = 1


Query: 1   MADALSKISF-SPSRPSFSP-----HHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLS 60
           MADALSKI+F +P  PS S      H L  P    KSV SSS+P  WKR+S+KLPS S  
Sbjct: 1   MADALSKIAFLAPFPPSSSSSHRHLHRLSLPFSEFKSVDSSSHPFNWKRISVKLPSTSGP 60

Query: 61  FSSRDSYGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSA 120
           FSS  SYG RIE  E     RNS SP RSSTISHSGFR PKAQKWWEKGL+ NMKEV+ A
Sbjct: 61  FSSSYSYGRRIESTE-----RNSVSPPRSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGA 120

Query: 121 QELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYS 180
            + VDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEM P+IQFLQVNYEEHKSMCYS
Sbjct: 121 HDFVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYS 180

Query: 181 LGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMAL 240
           LGVHVLPFFRFYRGAQGR+CSFSCTNAT+KKFKDALAKHNTDRCSLGPT+GLEEK+L AL
Sbjct: 181 LGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLAAL 240

Query: 241 AANRELCFNYTPKAAEEVPIPIT--IHARAHAGSVKISESEPSR-------LPLPSTILK 299
           AAN+EL F+YTPK AEEVPI I   I   A  G V+ SESE SR       LPL STILK
Sbjct: 241 AANKELSFDYTPKPAEEVPISIAIPIPIPATVGGVRTSESERSRSDVGQLPLPLSSTILK 300

[Close]

BLAST of Cp4.1LG08g06650 vs. NCBI nr
Match: gi|657989217|ref|XP_008386799.1| (PREDICTED: thioredoxin-like 1-1, chloroplastic [Malus domestica])

HSP 1 Score: 320.1 bits (819), Expect = 4.1e-84
Identity = 166/246 (67.48%), Postives = 190/246 (77.24%), Query Frame = 1


Query: 43  RLSLKLPSASLSFSSRDSYGGRIEFREAKGISRNSTSPTRSSTISH-SGFRTPKAQKWWE 102
           +L+  + S SLS  S D +G RI F +A GI  NS S   S+  S  SGFR  KA KWWE
Sbjct: 45  KLNPDISSLSLSTKS-DFHGKRIAF-QATGIRGNSQSHASSAVYSQQSGFRIGKAAKWWE 104

Query: 103 KGLEANMKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFL 162
           KG + NMKEVSSA++LV+SL NAGDKLVIVDFFSPGCGGCKALHPKICQ AEMNP++QFL
Sbjct: 105 KGNQPNMKEVSSAEDLVESLSNAGDKLVIVDFFSPGCGGCKALHPKICQLAEMNPDVQFL 164

Query: 163 QVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLG 222
           QVNYEEHKSMCYSL VHVLPFFRFYRGA GR+CSFSCTNAT+KKF+DALAKH  +RCSLG
Sbjct: 165 QVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHKPERCSLG 224

Query: 223 PTRGLEEKELMALAANRELCFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPS 282
           PT+GLEEKEL+ALAAN++L F YTPK  E+VP             V ++E  PSRLPLPS
Sbjct: 225 PTKGLEEKELLALAANKDLSFTYTPKPTEDVPA---------KEEVIVAEEAPSRLPLPS 279

Query: 283 TILKSA 288
              +SA
Sbjct: 285 ATSQSA 279

[Close]

BLAST of Cp4.1LG08g06650 vs. NCBI nr
Match: gi|694380611|ref|XP_009366421.1| (PREDICTED: thioredoxin-like 1-1, chloroplastic isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 316.6 bits (810), Expect = 4.6e-83
Identity = 182/297 (61.28%), Postives = 208/297 (70.03%), Query Frame = 1


Query: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVIS------SSNPSTWKRLSLKLPS--AS 60
           MA+ LSK S   S   +  HH        KS IS      + N S     S KL    +S
Sbjct: 1   MAEVLSKTSLLSS---WHHHH-----QNKKSSISVFPKSCNYNKSGSFSCSFKLNPDISS 60

Query: 61  LSFSSR-DSYGGRIEFREAKGISRNSTSPTRSSTISH-SGFRTPKAQKWWEKGLEANMKE 120
           LS S++ D +G RI F +A GI  NS S   S+  S  SGFR  KA KWWEKG + NMKE
Sbjct: 61  LSLSTKSDFHGKRIAF-QATGIRGNSQSHASSAVYSQQSGFRIGKAAKWWEKGNQPNMKE 120

Query: 121 VSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKS 180
           VSSA++LV+SL NAGDKLVIVDFFSPGCGGCKALHPKICQ AEMNP++QFLQVNYEEHKS
Sbjct: 121 VSSAEDLVESLSNAGDKLVIVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEHKS 180

Query: 181 MCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKE 240
           MCYSL VHVLPFFRFYRGA GR+CSFSCTNAT+KKF+DALAKH  +RCSLGPT+GLEEKE
Sbjct: 181 MCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHQPERCSLGPTKGLEEKE 240

Query: 241 LMALAANRELCFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTILKSA 288
           L+ALAAN++L F YTPK  E+V         A    V ++E  PS LPLPS   KSA
Sbjct: 241 LLALAANKDLSFTYTPKPTEDV---------AAKEEVIVAEEAPSLLPLPSATSKSA 279

[Close]

BLAST of Cp4.1LG08g06650 vs. NCBI nr
Match: gi|694380609|ref|XP_009366420.1| (PREDICTED: thioredoxin-like 1-1, chloroplastic isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 316.2 bits (809), Expect = 6.0e-83
Identity = 182/298 (61.07%), Postives = 208/298 (69.80%), Query Frame = 1


Query: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVIS------SSNPSTWKRLSLKLPS--AS 60
           MA+ LSK S   S   +  HH        KS IS      + N S     S KL    +S
Sbjct: 1   MAEVLSKTSLLSS---WHHHH-----QNKKSSISVFPKSCNYNKSGSFSCSFKLNPDISS 60

Query: 61  LSFSSR-DSYGGRIEFREAKGISRNSTSPTRSSTISH--SGFRTPKAQKWWEKGLEANMK 120
           LS S++ D +G RI F +A GI  NS S   S+  S   SGFR  KA KWWEKG + NMK
Sbjct: 61  LSLSTKSDFHGKRIAF-QATGIRGNSQSHASSAVYSQQQSGFRIGKAAKWWEKGNQPNMK 120

Query: 121 EVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHK 180
           EVSSA++LV+SL NAGDKLVIVDFFSPGCGGCKALHPKICQ AEMNP++QFLQVNYEEHK
Sbjct: 121 EVSSAEDLVESLSNAGDKLVIVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEHK 180

Query: 181 SMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEK 240
           SMCYSL VHVLPFFRFYRGA GR+CSFSCTNAT+KKF+DALAKH  +RCSLGPT+GLEEK
Sbjct: 181 SMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHQPERCSLGPTKGLEEK 240

Query: 241 ELMALAANRELCFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTILKSA 288
           EL+ALAAN++L F YTPK  E+V         A    V ++E  PS LPLPS   KSA
Sbjct: 241 ELLALAANKDLSFTYTPKPTEDV---------AAKEEVIVAEEAPSLLPLPSATSKSA 280

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g06650 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TRL11_ARATH	1.2e-80	62.99	Thioredoxin-like 1-1, chloroplastic OS=Arabidopsis thaliana GN=At1g08570 PE=2 SV...	[more]
TRL12_ORYSJ	3.0e-74	62.07	Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0326...	[more]
TRL11_ORYSJ	1.3e-69	58.02	Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0684...	[more]
TRL13_ARATH	5.6e-65	69.87	Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana GN=At2g33270 PE=2 SV...	[more]
TRL12_ARATH	2.1e-56	50.92	Thioredoxin-like 1-2, chloroplastic OS=Arabidopsis thaliana GN=At5g61440 PE=2 SV...	[more]

BLAST of Cp4.1LG08g06650 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LD91_CUCSA	2.7e-114	72.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G844860 PE=4 SV=1	[more]
M5W2V2_PRUPE	1.0e-81	57.58	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009372mg PE=4 SV=1	[more]
M5VQP2_PRUPE	2.3e-81	56.38	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009372mg PE=4 SV=1	[more]
A0A0B2PKM6_GLYSO	8.7e-81	57.73	Thioredoxin-like 1-1, chloroplastic OS=Glycine soja GN=glysoja_038206 PE=4 SV=1	[more]
A5AQX7_VITVI	8.7e-81	56.48	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007145 PE=4 SV=1	[more]

BLAST of Cp4.1LG08g06650 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08570.1	7.0e-82	62.99	atypical CYS HIS rich thioredoxin 4	[more]
AT2G33270.1	3.2e-66	69.87	atypical CYS HIS rich thioredoxin 3	[more]
AT5G61440.1	1.2e-57	50.92	atypical CYS HIS rich thioredoxin 5	[more]
AT4G26160.1	1.6e-33	49.18	atypical CYS HIS rich thioredoxin 1	[more]
AT4G29670.2	5.8e-28	43.14	atypical CYS HIS rich thioredoxin 2	[more]

BLAST of Cp4.1LG08g06650 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130754\|ref\|XP_008465333.1\|	1.2e-115	72.58	PREDICTED: thioredoxin-like 1-1, chloroplastic isoform X1 [Cucumis melo]	[more]
gi\|449446772\|ref\|XP_004141145.1\|	3.8e-114	72.52	PREDICTED: thioredoxin-like 1-1, chloroplastic [Cucumis sativus]	[more]
gi\|657989217\|ref\|XP_008386799.1\|	4.1e-84	67.48	PREDICTED: thioredoxin-like 1-1, chloroplastic [Malus domestica]	[more]
gi\|694380611\|ref\|XP_009366421.1\|	4.6e-83	61.28	PREDICTED: thioredoxin-like 1-1, chloroplastic isoform X2 [Pyrus x bretschneider...	[more]
gi\|694380609\|ref\|XP_009366420.1\|	6.0e-83	61.07	PREDICTED: thioredoxin-like 1-1, chloroplastic isoform X1 [Pyrus x bretschneider...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis
GO:0006662	glycerol ether metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR013766	Thioredoxin_domain
IPR012336	Thioredoxin-like_fold
IPR005746	Thioredoxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005623	cell
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g06650.1	Cp4.1LG08g06650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005746	Thioredoxin	PANTHER	PTHR10438	THIOREDOXIN	coord: 36..238 score: 1.8E
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 94..212 score: 7.2
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 97..214 score: 9.21
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 119..197 score: 1.3
IPR013766	Thioredoxin domain	PROFILE	PS51352	THIOREDOXIN_2	coord: 87..215 score: 9
None	No IPR available	PANTHER	PTHR10438:SF245	THIOREDOXIN-LIKE 1-1, CHLOROPLASTIC-RELATED	coord: 36..238 score: 1.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG08g06650	Cucsa.340610	Cucumber (Gy14) v1	cgycpeB0902
Cp4.1LG08g06650	CmaCh14G010890	Cucurbita maxima (Rimu)	cmacpeB293
Cp4.1LG08g06650	CmaCh06G017380	Cucurbita maxima (Rimu)	cmacpeB853
Cp4.1LG08g06650	CmoCh06G017250	Cucurbita moschata (Rifu)	cmocpeB796
Cp4.1LG08g06650	Cla017180	Watermelon (97103) v1	cpewmB831
Cp4.1LG08g06650	Csa3G844860	Cucumber (Chinese Long) v2	cpecuB865
Cp4.1LG08g06650	MELO3C026897	Melon (DHL92) v3.5.1	cpemeB798
Cp4.1LG08g06650	ClCG10G013280	Watermelon (Charleston Gray)	cpewcgB769
Cp4.1LG08g06650	CSPI03G40870	Wild cucumber (PI 183967)	cpecpiB867
Cp4.1LG08g06650	Lsi03G012890	Bottle gourd (USVL1VR-Ls)	cpelsiB709
Cp4.1LG08g06650	MELO3C026897.2	Melon (DHL92) v3.6.1	cpemedB939
Cp4.1LG08g06650	CsaV3_3G043360	Cucumber (Chinese Long) v3	cpecucB1061
Cp4.1LG08g06650	CsGy3G038320	Cucumber (Gy14) v2	cgybcpeB458
Cp4.1LG08g06650	Carg23335	Silver-seed gourd	carcpeB0389

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG08g06650	Cp4.1LG03g09270	Cucurbita pepo (Zucchini)	cpecpeB490

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG08g06650	Wax gourd	cpewgoB1077