Lsi03G008660 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G008660
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_1
Location	chr03 : 14620484 .. 14636719 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCTTCGTCCCTTACGCAGGCGGCTATCCTTAATCCATTAAAAACCCCTTCTCCACCTACTGCTTTCTCTCCTTTTCATTCTCTCTCTCTAACTTCCCCATTCCATAGAGAGATTGAGAATCAGAATTCAGATTTCAGAATCCTTCATCTTCTTCTTCCGTGATTCAATCTCGATGAGCATTTAGGGAACAAACGTGATTCGATTCAACGTCATCCACATCCGAATATGTCTCATGCGGTGTTTCAAACGGCTCAAATTATGCCCATTAACACCCAGCTTCCCACCAACAAGCTATGGCTGCCCTCGGTTGTTAAGCTCGGTCCCTGCCACCGAAACAGAGCAGTTCTGGTGGTGAAGGCCTTCACAACTTCTACTCCTTCTACTCCTTCTTCTTCTTCTTCTTCTTCGGGTGTTTCATATGGGGATTCCATTGCTCTGCTGGAGCGTTGCTTTGCAAACCCATCTGCGCCTGCTTCTTCCTCTTTTGGCCCTGTTATGAAAGGCCAATATGGTGCCCTTGGTTCTGTAACCTTGGAGAAATCAAAGCTTGATTTGTCTCAGAAGCAGTCCAAGTCTAGCCCCGAGGTAAGTTTTTTGGTTTTGGTTTCGGTTTCGTTCACTTGGAATATGTCTATGCGTTGGTGTTCTTTCTGTATGGATTCTAGACGTGAAATGTTTCATAGTTGGAAAAGCAGCTTTACTTTTTGGCAATATAAACTTTGGTTTTGGCTCCATTTTTATGAGAAGCAGTATTTTAACTTGGAAGTTTTTGTTCCTTATATCTCTGGCAATTGATAGCCTACACTTTCCTATCTCAGCCAACTGTTAACCATTGCTAAAATATTTCATCATAATTGAAATACTGGTCTTCCTTCTTGGGGTTCTATTTCCATCTGAGAGGCAATTCTTTTTGTTCGCTTTATCTGTTTACAGCAATTCTATTAGATTTTTAATCTTAGCCTGTGGATAGTTGAACAGTAGGTATGCTAAGTTAGATGTATAGAACCACTATCAATTGTTTATGGTTTTCATTATCGTGTCTGGAGTTCCTACAAAGAATGAAAGTTGGTCTAGGACAGGTGCAGGGGTTTGGTGGAGGGAGCAGGCCTATTTGGTTTATTTGTATATTTTTGGGGAAGAAACAAAAGATGTAATAGGGAGTGACATTGCCAATTTCCCTTTCTTTCTTGAACAAGAGTCTATTAGATCACCGTTAATAAAAATGAGTCCACTTCTCAATAGGTCAGAAATGGATTGCCGACTACTGAATCATATCTCTTGGAGAGAGGTGTAGGAAGGCCTAATGGTTATTGGAGATATGAAAAGAAGAAAAAGAAAAAGTAAAGACTTTAAGAGAGAATGAATTTGAACTAGTTACCTACTTAATTCAGTGACAAACACGTATAAAAAGGTAAACTATTGCCTTGTGAGATTAGTCGGGGTGAGCACAAGTATCTTGGGCACTCACATATATTATTAAAAAAAACAATTAAAGTCCACTTCTCATGTTTATTTGGTGGTGGACTTAATGTTTGGATAGATGTAGTAATCTCTGTTCCTTGCTAGTTGGTTGACTAAAAAATAGGTCATTCATGAAAACAAGCTAATATGAAATTGTTCCAAGTTGATGGCTTCCTCGTGGTCTCGTCCAGTTGCCTCCCCTCCAGCTCCCCCCTCCCCAACCTCTTCATGGCTTCCATCCTCTTCCCTTGGCTTCACCTTTCCATTCCCAGCCCTTCACCTTGATGGGGTAGAATAACTCACAATCCTTCTCGATCTTGGTGACAGTAAGTATAAGGGAAGTCATGCTAGTTTACAAAGTTTGAAGAAAATTCTTTTTCCTTCATCTCTGTAAAGCTAGATCTTTCTTGGCTGGCTTGTGAACTTCAATGTTGAAATGTTTGTTAGATGTGCCTCCCACCTTCGAACTTTTCAAGGAACATAGAGGTGAAGACATGTTATCTGGGAAGTAAAGGTTCAAACGAAGGAGGTTTTGCTATGGAGATGAGAGAGTTTTGATGACAATGGTGGAAAAAGAAAAATCATTGCCTCTTTTGGAGATGGCAAGATGGGTTGGTCATCTTTATTGTCTCTGACCCTAAATTATCTAGAAAAAAAAAATAAGTGTGACAAACTCAAGGATACAGTTGTAGCCAGGTCATTCCTTTCACCATCCTCATAAAGATCAATTGTTGAAAGGTATTATTGGCCTCCTTTTCTTGTCTATAATATCCTTCTCTGTTTCTTATTAAAAAAATGGTACTCATATTTAATGGCCTAGAAATCTTTATCATGTAGAACACATAACGTAATTCCTTCCCATCTGCATTTATGGTCCTACATCAGCCAATAAATTGTGCATGAGTCTAAGTGAGATGCTGCTGCACTGTTGAGTGTGTGCCATTTGACTAAATGAACATTTCTCCTCTCTTCCAAATCTCTCACATTGAGAGCACGAGGAAGAGCACTCCATTTCCATTTAACAAGATGACGTCCATGGTCCTGAGGAAAATCCTTCCAACGAAAAGATCCTTCTGCTTGAAGGGAAAAGGATGGGTCTCAAGCTTAATGTTGTTGAAGAGAGAAGCCAATGTTGTTGAAGGGAAAAGATCCTTCCTTGCATTCCAACCTCTCTGCTTGCTTTCAACAGATATAAATAGGAGACTACAAATTCTATTTTGACTCATATCTCTTTATGACCCTTGAAAACATCTCGAAACAATCTCCTATTCTTATTTCTTTCTAACCAAAGTTGTCAAGAAAAAACCCTAATGGACTCATATCTCTTTATGACCCCTACAAACTTCCAAAACAATCTCTTATTCTTTCTGACTTAAGTTGTCAATAAAAAAATCCTAATGGAGCCATATCTCTGTATGACATCTACAAACATCTCAAAACAATATCTTATTCTTTCTAACCATAGTTATCAAGAAAAAAACCCCAATTGACTCATACCTCTTTATGACACATACAAGCATTCTGAAACACTCCTATTCTTTGTAACCAGAGTCATCTAGAAAAAAACCTGATTTTCTTCTTCTTCTTTTTATTTTTATTTTTATTTTTATTTTTATTTTTTTTTAATTTTATGATTTATATATTTTTATTTAAAATTTTAAATTGAAACAATGGAGCAAGAAATCTCATTTTCACTCCTTAAAAATGTATGCTAAGAAGTTTCCACCGAATACCAAGAGGAAGGATCACCACATCCTAAAAGTTTAAAATGTGTCGACCTAAACTAGATATAGGAACAATCTGGAAACATCTGATTGGCATTGCCAGAGAATTCTCTATGAACCAACACCCCAATCGAGCTGAAGAACATAAGGGTCCTGGCTTGTATTCATGGTTTGTACCTAAGGCCACCAATAAAGACAGATCAATGGATATCTTTTTTTTTTCTTTCCATAACAAACAAACTTCCATCGGGAGGGGGGAAAACAGCCTAAAAACCTAGAAATGGAGGTTCTCTTGCCTAAAATAGGAATCAGATAAAACGCACCCAAAGAGGGACATTTTATATTTTCAGGATATAGTGATCCTTCTCTCTTCATATTCGGTGGAAACATTTTTTTGGGGTGCAAATGCCTTTCTTCTATCCTATGGTAAGCCTCATTTTGAATCTAAGAGGCTTCTAGCTTGAAAGAATTCTTAGGTAGACTCACTCTTCTCCAAGCAACCATTGCCGAATAAGGTTGTGCAAGCTTTGGAAAAGCTTCTTCCAAAATTTCTATGGAAAGGAAATGATGACAGCATGAGCTTCCAGCTTTTTAAATGGGAGAATGTCATGCTTCTAATTGAAGATTGAAGTGTTGGGATTTGTAGCTGATTAACAAGAATGAGCCTCTTCTTGCAAAATGGAATTGGCGCTACCTAAATGAGAATAAAGCCTTATGAAAGGAAGTCATCAATGCTTAGTATGGCCCTACTTGCTTATCTTCATCTCTGGGCTCATCATCCTATAGATCATTTAAGGGGTCTGTGGATTTCTATTATGAGGCATAAGAAATTAATTTTGATCGACTTACCTATAAGGTTAGGGATGGCGCACATACCTCTTTTTGTAGTGCTGTTTGGCTGAATGGCTCCATAGCACAAAGCTTCCCTCGGGTTTTTGATTTATCATTAAAAAGGTTTGCACTTGTTGAATATTTTTGGATGGCAGATTCTAACATTTGGAATTTGCATCTCAGAAGGAATCTCAGTGATATGAAAATAAAAAAATGGACCTCTCTTATGCATCTTTTATCGGTCTTACAACAGACACAAGGTAGTGACAAAATCTTGTGGAAGCTGTGCAATCAAATGGAGATTTTTCTGCAAAATCTTTTTTGAAGGATCTATCACAGAACACAATTATTGAACATTCAAATGCCTATGTTGATGTTTGGAAAGGTCATTACCCTAAGAAGATCAACTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTAATTGTAGCTTAGCTATATAGTGATAAGCACCCATGATAAGCTCCAACACAAGATGTGTCTTACATGTATTCTTCTCCCCAATGGTGCGTCATTTGTAAAAACGGCTCAGAGTCTCCAAGTCCCCTCACCTCTTTTTTTATCATGCAATTATGCATACAAGTTCTGGAGCTTGGTTTAATCTAGTTTTGGTTGACTTGTAAAGGGTCAGTTTCACTGGATTAGAGCCCTTTTCTGTTTTGGTTTGGCTCCTTTTGGGGGTTTGGTTTGTGTATGCCCGCTAGTATTCTTTCCCTTTTTCTCATTGGAACTTGGAATTATGGTTTCTCATTACACGAAAAAAAAGGTCAGCTCTATCCAAGAATCGTCGACTGAACTGTTTTGATAGTCTTTGTAGTTAAATATACAAAAGTTGCTATTTTTACTTCTTTTCTTGTGCTTCATGCTCAAACTTTTAGAGCACTATTGCTCTCTACTATGCTTTATGTACCATGCAATTCCTTTTGTTTTCTGTTGTCCAGTTATGCTTTAGTTTGGTTGGTAGAATTAAACATGTCTGCTATATTGTTGGTTGTGTTTTTCTCTTTCTCAATTCCAAATGCTTCATACTAAAATAATATTATAACAAATTGCAGACCGCAATTGGGGGAGGTGGCGGAGATATTGGCAAGAAAATTAATCATGGTGGTGGTGATGGTGGAGACGATGATGGTGATGACGACGACTACTATGATGAATTTGATGATGGGGATGAGGGAGATGAGGGTGGCCTGTTCCGGAGAAGGAAATTTCTTGAAGAGGTATACAATTTATCAGTGACAAATCTGTGTTGCTATTGTTTTTATGGGCTCATTTTTAGCACTAACTTCATATTTGCTCTAGCTTTTTGATCGTAAATTTGTAGATGCAGTATTAAACGAGTGGCAGAAGACAGTGATGGATTTGCCTGCTGGATTTCGTCAGGCTTATGAAATGGTAGTGTTTTTTTTCCTTATTAATGTAATATTTTCTTGGAGGAGCAGGAAATATTTTATCATTTTCCTTTTGTGTTAATTTATTTAGCCTTGAACTTTGACTAGATGCTGACGGAATATTTATCCCAGGGTTTAGTGAGCTCGGCTCAAATGGTAAAATTCTTAGCAATGAATGCCAGGCCAACTACAACTCGGTTCATTTCACGAACACTTCCTCAAGGAATCTCACGGGCTTTTATTGGCAGGTGATTTTCTTTTAAAACCTCTTGTAGAATTTACCAGGCCTTTCATTCATAGGTACTTGACTTCAATTCTTTTACCAATTCACCATTCTTGGAGGGGTGACATGGTAGCTAGAAGATATTAATTCTCCACTAACCATCAGCGTCTTAATATTGGATCCTAAACCTAAATTAAAGCAATGAGATAGTGTAATGTCTAATCCTAGATTATCCATGAATTCTGCAGGATATTTAATCTTGCTGCTATTACATTTTAGGGATGGTTGCATATATGACAAAATGAGCTAAATTAATAGCAAAAGTAGCAAAACTTAAAACTATGTGCAACTATGCCCCTCAACATCACTAATACACAACTTCAATCAAAATCACTAATACACAAATTGAGCCCAAATCAGTTTCTTTCCAACTATTTGCATGTTTTATCTTTTTCTTCTCCGTAGTTTTTTCTTCAATGTTTTTGTCTTTGTAGTTTCATTTTTGGTCCATTTAAGTAAGTTGAACCATTTTTTATTAGTTTCATTTTTTTCCTTAAGTCATTTTTCTTCAATGCATGTTTTATTTAATTGGTTTTTTTTTTTCTTTTTTTCTTTTTAATCATGTTCTTGATTAGTTCACAACCTTAGTCTAATAGTGATCTTCGTAGTTTTTTTCTCTTTTTTTTTGGTAGCCATTTTTTTTATTAACTAAGGTTTTTTTGTTTATAAATTGAGTTTTTTTTAGCCATTTTTTACTGTATTTCTTGTTATAATATGTATTTTAATGTATATTGTAATTTCATATTCTCTAGATTAGGGTTTCTAGGGCTCCTATATATATATATATATATATATATATATATGTAACTTAAGTCTTATGAATAGAATATTTTAGATCTATTCTCTAAATTATAAAGTACATGGTATCAGAGCCCTTTAGGGTTTCGAATTTTTGTTTGACGGCAACATTCTCATAAAGTTAGGGTTTGGTGTTTTGGTCATCGAGTTCGAGTGACCGTTTGTCGACACCACCCACCTCAGGAGAAGCGCCGCCACCGTCCGACGTCGTCTGTCTTCGTGGGTCGCTGGAAACAGGTGCGCGTGGGCCTCACGCGCCGCTAGGAACATTCTGCCTGTCGTCACGCGTGGAAGCTCCGATTTTGCTTCCGTCAGCTGGGTTCGTCTCGGCTTTCGTTTTTCGACCGGTCTGTGGTGTTGGTTTCATCGAAATCCCCTCGGGTGTGAAGTTATTTCGAAAATACCCTTTTTGCTCTTAGGGTTTGTGACTGTTTTGTTATTTCAGCTATTTGGGTCATCCTTTTTTTTTTTTTTTTTGCTGTTATTCTGCTTTCGAGATTTACCAATTGTGTGGTAATTTGTCATGGCTGAACCAAAGCAGATGTGGTGTCTAATGTACTTCCCTTAACATCAAAGATCACCGAACACAAGTTGAATGGATCTAATTACTATGATTGGCGATGAACGATTCAGTTTTACTTACTTAATCCTGATATGGATGATCATGTGACTAAGGATTTACTGACGGATGATACGAAAAAAGGTTGGCTTCGGGATGACGCTTGCCTTTATCTTTAGATTAAGAACTCCATTGAGAGTGAGGTTGTTGGCTTGGTGGATCATTGTAATTCTGTGAAGGAACTTTTAGGATTCTTGGAATTTCTTTACTCACGTCCATCGGATGTTTTGACGTTTGCATGCAATATTTTCGAGCTGAATAGAAAGCAGAATCTGTTACAAGCTACTTTATGAGATTTAAGAAGATAGATGCCAAACTTGCTTTATTATTATCTTTTAGCCCTGATGTCAAAGTTCAACAAGCTCAACGAGAAAAGATGGCTGTTATGATATTTTTGAATGGGCTTTCACCTGAATTTGGCATGGCTAAAACACAGATTCTCTCTGATTCTGACATTCCATCGCTAGATGACGCCTTCAGTCGTGTTCTTCGTATTGAGAGTTCTCAATCTGGTTCGTCTGTGTCTCAACCGAGCAGTGCTCTTATGGGCAAGAATGATCACTCTTGAGCTACCTCAGGGATGACCAACAATTTTCAGAAGCCTACCTATGATAGTCGGAAATCAGAGTCTCAGGAGATCCTCTGTCATTACTGTCGTAAGCCAGACCATCTGAAACGTGATTGTCGAAAGCTGCTGTATAAGACTCAGAGATCTCAGCATGCTCAGATAGCTTCCACCACTGATATGCCTGAAAAGTCTGTTACTATCTCTGCCGACGACTTTGCTAAATTCCAAGTATTCCAGGAATTCCTACAGGCATTTTCTTCATCGACTCCTATTGCCACCATTGCTGAGACAGGTAATACAAAATGTCTCCTTGCATCATCTACCAAATGGGTCATAGACTCTAGTGCCACTGCTCATATGACAGGTATTCTAACTTGTTCTCTAGCCCTTTGTCCCCTACCTCATCCCATCTGTCACTTTGGCAGATGGCTCAACCTCTTCTGTCCTTGGCTCCGGCACCATTCATCTCACCTCATCCTTCTCTTTGTCCTTTGTGTTACATTTGCCTCAATTGTCTTTTAATTTAATCTCTATTAGCCAACTTACTCGTGACCTTAACTGTTTTGTCTCGTTCTTTCCTGGTTATTGCTTGTTTCAGGATCGTGTGACGAAGAAGATTATTGGTAGAGGACATGAGTCAAGAGGCCTTTACATGTTTGACCACTAGATCCCGACAGTTGTGGCTTGTTCTGGAGTTACATCCCCGTTTGAAGTACATTGTCATTTAGGTCATCCATCGTTGTTCGTGTTGAAGAAACTTTATCTCGAATTTCGTTCTGTCTTCTTTAAATTGTGATTCGTGTCAGTTTGCTAAATTTCATTGTCTTAGTTCTAGTCCTAGAGTCCATAAACGAGCTAGTGCTCCATTTGAGTTAGTTCATTCTGATATTTGGGGTCCTTGTCTTGTTGTGTCCCAACTGGTTTTCGTTTTTTTGTTACTTTTGTTGACGATTATACTCGTTTGACTTGGTTATATTTAATGAAAAATCATTCTGAATTACTCTCTCATTTTTGTGATTTTCATGTTGAAATTCGAACTCAATTTGATGTCTCTATCAAAATCCTGCGCACTGATAATGCTGGTGAATATTTCTCTCATGTACTTGGATCTTACTTACGTGATCATGGCATCATTCATCAATCCTCATGCCCAGACACTCCATCTCAAAATGGAGTTGCTGAAAGAAAAAACCGACACCTACTTGAAACAGCTCGAGCCCTATCCTTTCAAATGCATGTTCCAAAGCCTTTTTGGGCTGATGCTGTTTCCACTGCCTGCTTCTTGATTAATAGAATGTCTTCCTCTGTTCTCAACGGTGAGATTCCCTATTGTGTTTTGTTTCCTACGAAACCTTTGTTTGCTATTGCTCCTAAGGTCTTTGGTTGTGTCTATTTTGCTCGGGATGTTCGTCCTCATCGTACTAAGTTAGATCCAAAATCTTTGAAATGCATATTCTTAGGCTTTTCATGTGTTCAAAAGGTTATCGTTGTTACTCTCCTACTCTTAACAGATATCTTGTATCTCTTGATGTTACGTTTTTTGAAGATATACCCTTTAGTCCTTCATCGTTAAGTCCTTGTCAAGGGGAGGATGATGATCTTTTGATTTATGAGATTACCGAGGTTACCGTCCCTACACCATCTTTTCCTCTGTCGTCATCTTTTGTATCTCTTCCGTCTCACCCACCTGTTACTCGAGTCTTCTCCAGACGGCCTCCTCAACATCCTTCAGACACATGTCCTACACCTCTGACTTCTTTGACATCTGATCCAAGACCGAGTGATGATCTTCCTATTGCCCTTCGAAAAGGTAAGCGCACTCGTACTTATCCTATTTTTTTGTTTGTTTCGTATAACCAGTTGTCTCCTCTCATTTATTCCTTTCTTACTTCACTTGATTCCACCTCTATCCCTAACTCTGTTCATGAAGCTTTATCGCATCCTGGGTGGCGTAGTGCAATGATTGAGGAGATGACTGCTTTGGATGACAATGGTACTTGAGATTTAGTCTCTCGTCCGACAGGCAAGAAGGCAATTGGGTGTAAATGGGTGTTTGCTATAAAAGTCAATCCTGACGACACAGTGGCTCGTCTGAAAGCTCGTCTTGTTGCCAAGGGTTATGCCCAAATCTATGAGACTGATTATTCTGATACTTTTTCTCCTGTTGTCAAATTAACTTCCATTCGATTGTTTCTTTCAATGGCTGCTACTCACAATTGGTTTTTGCATCAACTTGATATCAAGAATGCTTTTCTGCATGGTGATCTTCAGGAGGAAATTTATATGGAGCAACCACCTGGGTTTGTTGCTCAGGGGGAGAGTGATAAAGTGTGTAGACTTCGAAAATCTTTGTATGGATTGAAACAGCCTCGTGCATGGTTTGGTAAGTTAGTCAAGCCCTCGAATGTTTTGGTATGAAGAAAAGTATGTTGATCATTCTGTATTTTATTGACGATCTGATAATGGTATTACTTTGCTAGTTGTGTATGTTGATGATATCGTTATCACTGGCAACGATGTATCAGGTATATCTTCTTTTAAAACTTTTCTTCAGGGTCAGTTTCATACTAAAGATTTGGGAGAATTGAAATATTTCTTGGGTATTGAAGTAATGAGGAGCAAGAAAGGTATTTATTTATCACAACGGAAATATGTACTTGATTTGTTGTCTGAGACTGGAAAATTAGGAGTCGAACCATGTAGTACTCCGATGATACCAAATTTGCTACTTGCTAAAGAAGGTGAATGGTTTAAAGACCTTGAGAGATATAGAAGACTACTTAACAGTGACACGACCAGACATTGCTTATGCTGTGAGTATAGTGAGTCAGTTTATGTCTTCTCCTACAGTAGATCATTGGGCTGCAGCAGAACAAATTTTATGTTATTTGAAAGTTGCACCTGGACGTGGGATCTTATATAAAGATCATGGTCACACAAGGGTTGAATGTTTTTTAGATGCTGATTGGGCTGGATCTCGAAAAGATAGGAGATCGACGACTGGATATTGCATTTTTGTTGGAGGAAACTTAGTGTCGTGGAAAAGTAAAAAACAGAATGTAGTTTCACGTTCGAGTAGTCAGAATATAGAGTTATGGCACAATCTGTGTGTGAGATAATGTGGATATACCAACTTTTATCTGAGATGGACTTCAGTGTTACCGTGCCAGCTAAATTATGGTGTGATAACCAAGCTGCTCTGCACATTGCATCCAACCCAGTGTTTCATGAACGAACTAAATATATTGAAGTGGATTGTCATTTCATTCGTGAGAAAATACAAGAAGGAGTGATATCTACCGAATATGTGAAGACTGGAGAACAGTTGGGAGATATTCTTACCAAAGCTGTGAACAGAAGAATAAACTATCTATATAACAAGCTGGGCATGATTGGCATATTTGCTCCAGCTTGAGGGGGAGTGTTATAATATGTATTTTAATGTATATTATCTTTTATTGTAATTTCATATTCTCTAGATTAGGGTTTCTAGGGCTCCTATATATATATATATATATATATATATGTAACTTAAGTCTTATGAATAGAATACTTTAGATTTATTCTCTAAATTATAGAGTACATTTTTGATTGCCATTTTCTGTTCAACTCCCTTCCTTTTTCCATCTTGTTTTATGTGTTGTGGGAGATGGTAAGAAAACGTATTTCTGGGAAGATCATTGGGTGGGGGATAGACCCTTATCTTCTGTGTTCCCTCACTTATTTCATTTGTCCTTCTTGAAAAATTGTTGAGTGTCAACCATCATAGATTGGCCTAGTGGTAAATAGGAGGCATGGCTTTGATAAATGGCTAAGAAGCCATGAGTCCAATCCATGATGGCCAATTCCTAGGGGATTTAATATCCTACGAGTTTCTTTAACACTCAAATTTTGTAGGGTTAGGTAGGTTATCCCGTGAGATTAGTCGAGACGTGCATAAGCTGGCCTGAACACTCATGGATATAAAAAAAAGAAGAAAAGAAAAAAAATTGTCGAATGTTTGACCTTTTGGTTTGGTCGAGGAATTCTGTTTCTTTCTCCTTTGGTTTCCGTCGGCCATTGTCCAATAGGGAAACGACGGGGTGACCTCTCTTCTTTCCTTGATTGGGAGTTTTGATTTTAGGATTGGAGGAAGGATTGTTCGTGTTTGGAGCCAGCCCTTTGGAGAGCTTCTCTTGTAAGTCATTCTTTAGGATTTTATTGGAACCCTCTCTTGTTGCTAAGTCGGTCTTTGATGTTTTATGGAGGATTAAGATTCCAAATAAAGTTAAGTTCTTTTTGTGGCAAGTTTTGCTTGGCCGTGTGAACATGATGGATAAGCTTTTGAGAAAGATGACTTTGTTAATGGGGCCTTTTCTGTTGTATTCTTTGTTGAAGGCGGAGGAAAACCTAGACCACCTTCTGTGAGAGTATCAGTTTGTAAGATCGGTGTGAAATGGTTTCTTTCAAGTGTTCGATTTTACGCTTGCTTTTTAGGAGATGTTCGTTTGATGATCATGGAGTTTCTCCTCATCTGCCTTTCAAAGAGAAAGGCAATGACATTTGCTTTGGTGTGTGGGGGTGTGCACGTTGTTGTGGAATTTTTGGGGGGAGAGGAACAATAGATTGTTTCGTGGTGTGGAAAGGGACCCTAGTGAGGTTTGGTTCGTGGTGAGGTTTCATGTGTCTCTTTGGGCATCGGTTTCGAAGAATTTTTGTAATTATTCCTTAGGGAATATCTTACTTAGTTGGAAACCTTTTCTTTAGTGGGGTTTTTTGTGTACTTGATCTTTTGTATGCCCTTGTATTCTTTCATTCTTTTGCAATAAAAGAAGTAGCTTCTATCATGAAAAAAAAAGGTTAGCTTACAACATTTTCTTTTATAAGAAACTATTTCATTGATTAGGTCACAACTTTAGTCCAATTGCGGTCTTCGTTTTTTTTTTTTTTTTTTTTTTTTTTGCCCCTGTGGCTTGTGTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTAGCTTGCACCTGTAGCTTGAGTTTTTGTTTTTTTGATTGAGTCTCTACTTTTATTGTCTCGTATTGCTGATAGACTTCAATAAGTGATAGCAAACTGGTCACTATGACTATGAATGAAGTCTATGAGTGATCGACAAACTCTTATCATCAATTGAAGTCCATTAGTGATAGGTGTCTATTGCCAATTGAAGCCTATCACGAATTTTGTGTCAATATTAGGAATCAATAATAAAGTAAGTGTCATAGTATAGTCTATTAATGATAGGCTGATGTTAATTTTTGATATTAGTCTATCAATGATAGACTTTATTCATATACAATATTCAATCACTAATAGAATGATATTCATTTATGATATTTGAAGGGAATATCATCCTATCTGTGAAAGACTTAGAGTCTAACTGATATGCTAGTCAACTAGGAACAAAGATATAAATCTATCCTTGATAAATTTACAAGACAAATCAATGATGGACTTCTATCGGTGATACATCTACATGACAAGTCAGTTATTAACGGGATAAAAGTCTATCACTGATAGAATGATATTCCTATATAAAATGACAAGAAAATATTATAGTCTATTATTGATAGACTTTAATATCTGCATAAGGTCTATCATCGATAGACTAATATCACATATGAATATTGGTCTATCACTAATAGACTATGATAAGGGTAAAGTTGGAATTACGAGAAATTTAAATATAATAGAAAACTATTTTGCTATATCTACCGTATATTTATAATATTTGCTATATTTGCAAATATTTTTCCCGATTTACAAATACTCTACATTTTATGGTCGTAAGTCTTAGTGGTCATTTATTTTCCTTGATTTAAGGTTCACCTCACTCATCAATCATTTCTTATACTTCTATCAGGCCGTTTTGTTTAGGGGTTCTGATTTTTTGTTACTGCTCATACTTTATGATTCATGCCTCTTCAGCCCTTCATTTCTCCTAGTTCCCTTGCTCACAATTATTCTGGGTAGATAAAGGACACACTACACCAAGTCATTATCGTTAAAATGATAAAATCAACAGTTTAATTTCTCTCATGGTTCCCAACTTGAATTTTTCTTGTACTGAACACTAGTTTTTCCCAGTGAGAGACTGCATGCACTCTTTGAGAAAGAAATATATATTTTCGAACTTTAACTTATTATATAATTGCACAGGATGTTAGCAGACCCTGCCTTTCTCTATAGGCTTCTTTTAGAGCAGGCTGCTACAATTGGTTGCTCAGCTTGGTGGGAAATAAAGAATCGCAAGGATAGGTTTGTTATTTAGCCATACGTTAAAACTTTATTTCGTTTCTATTTTTCAATTTTCTTGGCTTACAAATTTTTGTACTGTTGTGGCTCCAGGATAAAGCAGGAATGGGATCTGGCGCTCATTAATGTTCTCACAGTTACTGCCTGCAATGCTATAGTTGTTTGGTCACTTGCTCCTTGTCGTTCATATGGAAATACATTCCGATTTGATTTGCAAAATACATTACAGAAGCTTCCCAATAATATATTTGAAAAAAGTTATCCTATGAGGGAATTTGACTTACAAAAGAGAATCCATTCGTTCTTCTACAAAGCTGCAGAGTTGTGCATGGTCGGTATAACTGCAGGAGCAGCTCAAGGCGCTTTGTCCAATTTTCTCTCTAGTAAAAAGCAGGAAAGGTATAAGATTATTCCCATTTGGCAATAGAAATGCTAATCAAGTGCTGCATGTTTCTTGACTTGGAATTGCGTACATGTTTGTCAGGTTATCTGTATCAGTTCCGACTGTGAGTACCAATGCTCTCGGCTATGGTGCTTTTCTCGGGCTCTATGCAAATCTCCGGTATCAGTTATTATGCGGTTTTGACAGAGCCATGATCAATCATTTTGATGTTATTGGAGTGGCTCTGTTTTTCAGCTCTGCATTGAGGTTCGGACTGCTTTTTTCCCCCTTTTGAAATATCTGTAGCATTTATGTGTGAAGCCTTAAACTTGCCATTTTTTTTAAAAAGTCTGGTTTAAACACAATCTTATCCAAAAAGACACTTCTTTTGGGTAAAGAATATTCAATAAAATCATTTTGGAACTGTATGTAGGGTTTTGAATGTGCAACTAGGAGAAAGATCAAGACTGGCTTGGCTTGGAGTGGAGGCAGACCCACTGGTTCAGTCAAGTGATCTCTTGAAGAAGGTTTACAACCGACCTTCTGAAGATGTTAGTAGGTCTTCCTCAAAATGGTTTATTTCAAAGAATGCCATCATTTCTGGCCTTGGACTTCTTGGTCTCAAACAGACCGGTGCTGACTCTGTCTCTGAAGGCGAATCAGTACCACCCAAAGCACGGAGGAAGAGAATTGTCCGAAAAAAGGTAACGGCAGGTTCGTCGTGATATTTTTATCCAGTCAATGCATTCTTCATTACCCAGTTTTGCAGTTGGACGAGAGATTTGGTGCAAAGTCGCCGTATAAATCTTTGATAAAAGTTAGTTGCTAGGTGGATGGTATTTTTCCTTTGATGTAACTGGAGAAATTCATTTTAAACTGAAGTAATGCAATTATTATAAAATTTACCTTGTAGAGATTTTTTGTTTTGTTTATAATTTAATTATTTTGGTTGGGGTTTTCCACAACCTAGATTTGAGTGTTTAAAATACTCTTCTTCTGGTATTATCTCTTTAGTGAATAAGGTTATCAAAGTAGTCTCTATGAAACTACAACCTTACACGTTTGTATCAGATTGAGTTATATATTCATTCCCCGTTAGGAAAGAAGCGCAAATCTTACGTTCCAATTGGGAACTTGGTGGTGCAATTGCTAGATTGGACACGAAAATTCAAAATTTCTACAATGATAATGATTTTGG

mRNA sequence

GTTCTTCGTCCCTTACGCAGGCGGCTATCCTTAATCCATTAAAAACCCCTTCTCCACCTACTGCTTTCTCTCCTTTTCATTCTCTCTCTCTAACTTCCCCATTCCATAGAGAGATTGAGAATCAGAATTCAGATTTCAGAATCCTTCATCTTCTTCTTCCGTGATTCAATCTCGATGAGCATTTAGGGAACAAACGTGATTCGATTCAACGTCATCCACATCCGAATATGTCTCATGCGGTGTTTCAAACGGCTCAAATTATGCCCATTAACACCCAGCTTCCCACCAACAAGCTATGGCTGCCCTCGGTTGTTAAGCTCGGTCCCTGCCACCGAAACAGAGCAGTTCTGGTGGTGAAGGCCTTCACAACTTCTACTCCTTCTACTCCTTCTTCTTCTTCTTCTTCTTCGGGTGTTTCATATGGGGATTCCATTGCTCTGCTGGAGCGTTGCTTTGCAAACCCATCTGCGCCTGCTTCTTCCTCTTTTGGCCCTGTTATGAAAGGCCAATATGGTGCCCTTGGTTCTGTAACCTTGGAGAAATCAAAGCTTGATTTGTCTCAGAAGCAGTCCAAGTCTAGCCCCGAGACCGCAATTGGGGGAGGTGGCGGAGATATTGGCAAGAAAATTAATCATGGTGGTGGTGATGGTGGAGACGATGATGGTGATGACGACGACTACTATGATGAATTTGATGATGGGGATGAGGGAGATGAGGGTGGCCTGTTCCGGAGAAGGAAATTTCTTGAAGAGCTTTTTGATCGTAAATTTGTAGATGCAGTATTAAACGAGTGGCAGAAGACAGTGATGGATTTGCCTGCTGGATTTCGTCAGGCTTATGAAATGATGCTGACGGAATATTTATCCCAGGGTTTAGTGAGCTCGGCTCAAATGGTAAAATTCTTAGCAATGAATGCCAGGCCAACTACAACTCGGTTCATTTCACGAACACTTCCTCAAGGAATCTCACGGGCTTTTATTGGCAGGATGTTAGCAGACCCTGCCTTTCTCTATAGGCTTCTTTTAGAGCAGGCTGCTACAATTGGTTGCTCAGCTTGGTGGGAAATAAAGAATCGCAAGGATAGGATAAAGCAGGAATGGGATCTGGCGCTCATTAATGTTCTCACAGTTACTGCCTGCAATGCTATAGTTGTTTGGTCACTTGCTCCTTGTCGTTCATATGGAAATACATTCCGATTTGATTTGCAAAATACATTACAGAAGCTTCCCAATAATATATTTGAAAAAAGTTATCCTATGAGGGAATTTGACTTACAAAAGAGAATCCATTCGTTCTTCTACAAAGCTGCAGAGTTGTGCATGGTCGGTATAACTGCAGGAGCAGCTCAAGGCGCTTTGTCCAATTTTCTCTCTAGTAAAAAGCAGGAAAGGTTATCTGTATCAGTTCCGACTGTGAGTACCAATGCTCTCGGCTATGGTGCTTTTCTCGGGCTCTATGCAAATCTCCGGTATCAGTTATTATGCGGTTTTGACAGAGCCATGATCAATCATTTTGATGTTATTGGAGTGGCTCTGTTTTTCAGCTCTGCATTGAGGGTTTTGAATGTGCAACTAGGAGAAAGATCAAGACTGGCTTGGCTTGGAGTGGAGGCAGACCCACTGGTTCAGTCAAGTGATCTCTTGAAGAAGGTTTACAACCGACCTTCTGAAGATGTTAGTAGGTCTTCCTCAAAATGGTTTATTTCAAAGAATGCCATCATTTCTGGCCTTGGACTTCTTGGTCTCAAACAGACCGGTGCTGACTCTGTCTCTGAAGGCGAATCAGTACCACCCAAAGCACGGAGGAAGAGAATTGTCCGAAAAAAGGTAACGGCAGGTTCGTCGTGATATTTTTATCCAGTCAATGCATTCTTCATTACCCAGTTTTGCAGTTGGACGAGAGATTTGGTGCAAAGTCGCCGTATAAATCTTTGATAAAAGTTAGTTGCTAGGTGGATGGTATTTTTCCTTTGATGTAACTGGAGAAATTCATTTTAAACTGAAGTAATGCAATTATTATAAAATTTACCTTGTAGAGATTTTTTGTTTTGTTTATAATTTAATTATTTTGGTTGGGGTTTTCCACAACCTAGATTTGAGTGTTTAAAATACTCTTCTTCTGGTATTATCTCTTTAGTGAATAAGGTTATCAAAGTAGTCTCTATGAAACTACAACCTTACACGTTTGTATCAGATTGAGTTATATATTCATTCCCCGTTAGGAAAGAAGCGCAAATCTTACGTTCCAATTGGGAACTTGGTGGTGCAATTGCTAGATTGGACACGAAAATTCAAAATTTCTACAATGATAATGATTTTGG

Coding sequence (CDS)

ATGTCTCATGCGGTGTTTCAAACGGCTCAAATTATGCCCATTAACACCCAGCTTCCCACCAACAAGCTATGGCTGCCCTCGGTTGTTAAGCTCGGTCCCTGCCACCGAAACAGAGCAGTTCTGGTGGTGAAGGCCTTCACAACTTCTACTCCTTCTACTCCTTCTTCTTCTTCTTCTTCTTCGGGTGTTTCATATGGGGATTCCATTGCTCTGCTGGAGCGTTGCTTTGCAAACCCATCTGCGCCTGCTTCTTCCTCTTTTGGCCCTGTTATGAAAGGCCAATATGGTGCCCTTGGTTCTGTAACCTTGGAGAAATCAAAGCTTGATTTGTCTCAGAAGCAGTCCAAGTCTAGCCCCGAGACCGCAATTGGGGGAGGTGGCGGAGATATTGGCAAGAAAATTAATCATGGTGGTGGTGATGGTGGAGACGATGATGGTGATGACGACGACTACTATGATGAATTTGATGATGGGGATGAGGGAGATGAGGGTGGCCTGTTCCGGAGAAGGAAATTTCTTGAAGAGCTTTTTGATCGTAAATTTGTAGATGCAGTATTAAACGAGTGGCAGAAGACAGTGATGGATTTGCCTGCTGGATTTCGTCAGGCTTATGAAATGATGCTGACGGAATATTTATCCCAGGGTTTAGTGAGCTCGGCTCAAATGGTAAAATTCTTAGCAATGAATGCCAGGCCAACTACAACTCGGTTCATTTCACGAACACTTCCTCAAGGAATCTCACGGGCTTTTATTGGCAGGATGTTAGCAGACCCTGCCTTTCTCTATAGGCTTCTTTTAGAGCAGGCTGCTACAATTGGTTGCTCAGCTTGGTGGGAAATAAAGAATCGCAAGGATAGGATAAAGCAGGAATGGGATCTGGCGCTCATTAATGTTCTCACAGTTACTGCCTGCAATGCTATAGTTGTTTGGTCACTTGCTCCTTGTCGTTCATATGGAAATACATTCCGATTTGATTTGCAAAATACATTACAGAAGCTTCCCAATAATATATTTGAAAAAAGTTATCCTATGAGGGAATTTGACTTACAAAAGAGAATCCATTCGTTCTTCTACAAAGCTGCAGAGTTGTGCATGGTCGGTATAACTGCAGGAGCAGCTCAAGGCGCTTTGTCCAATTTTCTCTCTAGTAAAAAGCAGGAAAGGTTATCTGTATCAGTTCCGACTGTGAGTACCAATGCTCTCGGCTATGGTGCTTTTCTCGGGCTCTATGCAAATCTCCGGTATCAGTTATTATGCGGTTTTGACAGAGCCATGATCAATCATTTTGATGTTATTGGAGTGGCTCTGTTTTTCAGCTCTGCATTGAGGGTTTTGAATGTGCAACTAGGAGAAAGATCAAGACTGGCTTGGCTTGGAGTGGAGGCAGACCCACTGGTTCAGTCAAGTGATCTCTTGAAGAAGGTTTACAACCGACCTTCTGAAGATGTTAGTAGGTCTTCCTCAAAATGGTTTATTTCAAAGAATGCCATCATTTCTGGCCTTGGACTTCTTGGTCTCAAACAGACCGGTGCTGACTCTGTCTCTGAAGGCGAATCAGTACCACCCAAAGCACGGAGGAAGAGAATTGTCCGAAAAAAGGTAACGGCAGGTTCGTCGTGA

Protein sequence

MSHAVFQTAQIMPINTQLPTNKLWLPSVVKLGPCHRNRAVLVVKAFTTSTPSTPSSSSSSSGVSYGDSIALLERCFANPSAPASSSFGPVMKGQYGALGSVTLEKSKLDLSQKQSKSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEMMLTEYLSQGLVSSAQMVKFLAMNARPTTTRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDLLKKVYNRPSEDVSRSSSKWFISKNAIISGLGLLGLKQTGADSVSEGESVPPKARRKRIVRKKVTAGSS

Homology

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BLAST of Lsi03G008660 vs. Swiss-Prot
Match: RER1_ARATH (Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana GN=RER1 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 8.7e-16
Identity = 103/400 (25.75%), Postives = 169/400 (42.25%), Query Frame = 1


Query: 71  LLERCFANPSAPASSSFGPVMKGQYGALGSVTLEKSKLDLSQKQSKSSPETAIGGGGGDI 130
           L  RC  +       S   +    Y  +   TL   + +L             GGG G  
Sbjct: 59  LRNRCVGSDVVTGEISGRSIPDWAYSGVKDETLSDLEPELDDGDGGDENGNNDGGGNGGN 118

Query: 131 GKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQ 190
           G     GGG GGD +GDD +  DE D  +E + G + +              + V+ E +
Sbjct: 119 GD----GGGGGGDGEGDDGE--DEADKAEEKEFGPILK-------------FEEVMKETE 178

Query: 191 KTVMDLPAGFRQAYEMMLTEYLSQGLVSSAQMVKFLAMNARPTTTRFISRTLPQGISRAF 250
           +  + LP       E ML    S G +    ++++L +        F+ R+         
Sbjct: 179 RRGITLP-------EDMLEAAKSVG-IRKLFLLRYLDLQGSVWPLGFLMRSCAM-----L 238

Query: 251 IGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVW 310
             RMLADP+FL+++  E A    C+ + E++ R +    E++L   ++L     +  +V 
Sbjct: 239 RNRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVG 298

Query: 311 SLAPCRSYG-----NTFRF-DLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC 370
            LAP    G     +T  F DL+     LP+++FE   P  +F + +RI +FFYK     
Sbjct: 299 LLAPYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYG 358

Query: 371 MVGITAGAAQGALSNFL----SSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCG 430
            VG   G     ++N +     S K+    V +P +  +A  +G FLGL +N RYQ++ G
Sbjct: 359 SVGFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQIING 418

Query: 431 FDRAMINHF---DVIGVALFFSSALRVLNVQLGERSRLAW 458
            +R +        +  VA+ F+  +R  N   G    + W
Sbjct: 419 LERVVEGSTAAKRIPVVAMAFTVGVRFANNVYGGMQFVDW 426

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BLAST of Lsi03G008660 vs. Swiss-Prot
Match: RER6_ARATH (Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana GN=RER6 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 7.4e-15
Identity = 73/259 (28.19%), Postives = 112/259 (43.24%), Query Frame = 1


Query: 177 FDRKFVDAVLNEWQKTVMDLPAGFRQAYEMMLTEYLSQGLVSSAQMVKFLAMNARPTTTR 236
           FDR  +  V+N   +    LP   +   ++        GLVS   +     +   P  + 
Sbjct: 418 FDRAEIARVMNAAGRRRDALPPDIQNGLDL--------GLVSPEVLQNLFDLEQYPLISE 477

Query: 237 FISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALI 296
              R       + F  R+LADP FL RL +E+A +I  +   + + RK+   +E D  + 
Sbjct: 478 LTQRF------QGFRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVIT 537

Query: 297 NVLTVTACNAIVVWSLAPCRSY--------GNTFRFDLQNTLQKLPNNIFEKSYPMREFD 356
           + +  +  +   VW  AP  S+        G      L+  L  +P+N F+KS   RE++
Sbjct: 538 DTVRGSVVDFFTVWLPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWN 597

Query: 357 LQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSK----KQERLSVSVPTVS---TNAL 416
           L  RI S      +L  VG+ +  A    SN L+      K E +    P  S     A+
Sbjct: 598 LNLRIASVIVGGLKLAGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAM 657

Query: 417 GYGAFLGLYANLRYQLLCG 421
            YG FLG  ANLRYQ++ G
Sbjct: 658 VYGGFLGTSANLRYQIIAG 662

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BLAST of Lsi03G008660 vs. Swiss-Prot
Match: RER5_ARATH (Protein RETICULATA-RELATED 5, chloroplastic OS=Arabidopsis thaliana GN=RER5 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 8.2e-14
Identity = 68/244 (27.87%), Postives = 111/244 (45.49%), Query Frame = 1


Query: 193 VMDLPAGFRQAYEMMLTEYLSQGLVSSAQMVKFLAMNARPTTTRFISRTLPQGISRAFIG 252
           VM+     R A    + + L  GLVS   +  F  +   P  +    R       + F  
Sbjct: 417 VMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRF------QGFRE 476

Query: 253 RMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSL 312
           R+LADP FL RL +E+A +I  +   + + RK+   +E D  + + +  +  +   VW  
Sbjct: 477 RLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWLP 536

Query: 313 APCRSY--------GNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC 372
           AP  S+        G      L+  L  +P+N F+KS   +E+ L  RI S      +L 
Sbjct: 537 APTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKLA 596

Query: 373 MVGITAG-AAQGALSNFLSSKKQERLSVSV-------PTVSTNALGYGAFLGLYANLRYQ 421
            VG+ +  AA G+ +   + +K  +  + V       P + T AL YG +LG  +N+RYQ
Sbjct: 597 GVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKT-ALVYGGYLGTSSNIRYQ 653

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BLAST of Lsi03G008660 vs. Swiss-Prot
Match: RETIC_ARATH (Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana GN=RE PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.8e-11
Identity = 81/317 (25.55%), Postives = 138/317 (43.53%), Query Frame = 1


Query: 125 GGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDA 184
           GGGG        GGG+GG+ DG+ +DY       +E + G + +              + 
Sbjct: 122 GGGG--------GGGNGGEGDGEGEDY-------EEKEFGPILK-------------FEE 181

Query: 185 VLNEWQKTVMDLPAGFRQA------YEMMLTEYLSQGLVSSAQMVKFLAMNARPTTTRFI 244
           V+ E +     LP+   +A       +++L  YL   L SSA ++ F             
Sbjct: 182 VMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLD--LQSSAGLLGFAIR---------- 241

Query: 245 SRTLPQGISRAFI-GRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALIN 304
                   S A +  RMLADP+FL+++  E      C+   E++ R      E++L + +
Sbjct: 242 --------SWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVAD 301

Query: 305 VLTVTACNAIVVWSLAPCRSYGNT-----FRFDLQNTLQKLPNNIFEKSYPMREFDLQKR 364
           +L  T  N  +V  LAP   +G       F   +      LP+++FE   P   F  Q+R
Sbjct: 302 LLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQR 361

Query: 365 IHSFFYKAAELCMVGITAGAAQGALSNFLSSKK----QERLSVSVPTVSTNALGYGAFLG 424
           + ++FYK      VG   G     ++N + + K    +   ++ VP +  +A  +G FL 
Sbjct: 362 LATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINKSEENIPVPPLIKSAALWGVFLS 390

Query: 425 LYANLRYQLLCGFDRAM 426
           + +N RYQ++ G +R +
Sbjct: 422 VSSNTRYQIINGLERVV 390

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BLAST of Lsi03G008660 vs. TrEMBL
Match: A0A0A0KDZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G411290 PE=4 SV=1)

HSP 1 Score: 924.9 bits (2389), Expect = 4.6e-266
Identity = 487/548 (88.87%), Postives = 507/548 (92.52%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLPTNKLWLPSVVKLGPCHRNRAVLVVKAFTTSTPSTPSSSSSS 60
           MSHAVFQTAQIMPINTQL TN LWLP+VVKLGP +RNRAVLVVKAFT S PS     SSS
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPS-----SSS 60

Query: 61  SGVSYGDSIALLERCFANPSAPA---------SSSFGPVMKGQYGALGSVTLEKSKLDLS 120
           SGVSYGDSI+ LERCF     PA         SSSFGPVMKG+YGA G+VTLEKSKLDLS
Sbjct: 61  SGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLS 120

Query: 121 QKQSKSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK 180
           QKQSKSSPE AIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK
Sbjct: 121 QKQSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK 180

Query: 181 FLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEMMLTEYLSQGLVSSAQMVKFLAMNAR 240
           FLEELFDRKFVDAVLNEWQKT+MDLPAGFRQAYEM        GLVSSAQMV+FLA+NAR
Sbjct: 181 FLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEM--------GLVSSAQMVRFLAVNAR 240

Query: 241 PTTTRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEW 300
           PTTTRFISR+LPQGISRAFIGRMLADP+FLY+LLLEQAATIGC+AWWEIKNRKDRIKQEW
Sbjct: 241 PTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEW 300

Query: 301 DLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQK 360
           DLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQK
Sbjct: 301 DLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQK 360

Query: 361 RIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYA 420
           RIHSFFYKAAELCMVGITAGAAQG LSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYA
Sbjct: 361 RIHSFFYKAAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYA 420

Query: 421 NLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDL 480
           NLRYQLLCGFDRAMINHFDVIGVALF SSA+RVLNVQLGERSRLAWLG+EADPLVQS +L
Sbjct: 421 NLRYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSREL 480

Query: 481 LKKVYNRPSEDVSRSSSKWFISKNAIISGLGLLGLKQTGADSVSEGESVPPKARRKRIVR 540
           L+KVYNRPS+ VS+SSSKWFISKNAIISGLGLLGLKQ+G DSVSEGESV PKARRKRIVR
Sbjct: 481 LEKVYNRPSQGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESV-PKARRKRIVR 534

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BLAST of Lsi03G008660 vs. TrEMBL
Match: M5XLU6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004314mg PE=4 SV=1)

HSP 1 Score: 811.2 bits (2094), Expect = 7.5e-232
Identity = 429/540 (79.44%), Postives = 470/540 (87.04%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLPTN-KLWLPSVVKLGPCHRNRAVLVVKAFTTSTPSTPSSSSS 60
           MSHAVFQTAQIMPINTQLPT  KL  P  +++      R  L++KA   + PST      
Sbjct: 1   MSHAVFQTAQIMPINTQLPTKPKLMGPIQLRMS----ERRGLLLKA-NCAAPST------ 60

Query: 61  SSGVSYGDSIALLERCFANPSAPASSSFGPVMKGQYGALGSVTLEKSKLDLSQKQSKSSP 120
            SG   GDS+ALLERCF  PS   +  FGPVMKGQYGALG+VTLEK KLD+SQKQSKSSP
Sbjct: 61  -SGFVDGDSMALLERCFVGPSV--AGGFGPVMKGQYGALGAVTLEKGKLDMSQKQSKSSP 120

Query: 121 ETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDR 180
           ETAIGGGGGDIGK+IN+GGGDGGDDDGDDDDY+D+FDDGDEGDEGGLFRRR FLEELFDR
Sbjct: 121 ETAIGGGGGDIGKRINNGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRMFLEELFDR 180

Query: 181 KFVDAVLNEWQKTVMDLPAGFRQAYEMMLTEYLSQGLVSSAQMVKFLAMNARPTTTRFIS 240
           KFVDAVLNEWQKT+MDLPAGFRQAYEM        GL+SSAQMVKFLA NARPTTTRFIS
Sbjct: 181 KFVDAVLNEWQKTMMDLPAGFRQAYEM--------GLISSAQMVKFLATNARPTTTRFIS 240

Query: 241 RTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVL 300
           R LP GISRAFIGRMLADPAFLYR LLEQAATIG S WWE+KNRK RIKQEWDLALINVL
Sbjct: 241 RALPDGISRAFIGRMLADPAFLYRFLLEQAATIGSSVWWELKNRKGRIKQEWDLALINVL 300

Query: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYK 360
           TVTACNAIVVWSLAPCRSYGNTF+FDLQNTLQKLPNNIFEKSYP+REFDLQKR+HSFFYK
Sbjct: 301 TVTACNAIVVWSLAPCRSYGNTFKFDLQNTLQKLPNNIFEKSYPLREFDLQKRVHSFFYK 360

Query: 361 AAELCMVGITAGAAQGALSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420
           AAELCMVG+TAGA QG+LSNFL+ KK+ RLSV++P+V  NALGYGAFLGLYANLRYQLLC
Sbjct: 361 AAELCMVGLTAGAVQGSLSNFLAHKKEGRLSVTIPSVKANALGYGAFLGLYANLRYQLLC 420

Query: 421 GFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDLLKKVYNRP 480
           GFDRA++NHFDVIGVALF S+ LR+LNVQ+GERSRLAWLGVEADPLV S DLL KVY+RP
Sbjct: 421 GFDRAVMNHFDVIGVALFLSTTLRLLNVQVGERSRLAWLGVEADPLVDSDDLL-KVYSRP 480

Query: 481 SEDVSRSSSKWFISKNAIISGLGLLGLKQTGADSVSEGESVPPKARRKRIVRKKVTAGSS 540
           S+++ R SSKWFISKNAI+SGLGLLG+KQ  ADSV++GES  PK RRKRIVRKKVTA S+
Sbjct: 481 SDNLERPSSKWFISKNAIVSGLGLLGIKQGNADSVADGESSTPKTRRKRIVRKKVTASSA 517

[Close]

BLAST of Lsi03G008660 vs. TrEMBL
Match: W9RMD6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024194 PE=4 SV=1)

HSP 1 Score: 773.1 bits (1995), Expect = 2.3e-220
Identity = 414/549 (75.41%), Postives = 468/549 (85.25%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLPTNKLWLPSVV--KLGPCHRNRAVL-------VVKAFTTSTP 60
           MSHA FQTAQIM INTQ P     LPS+   K+ P    + V+        V A    + 
Sbjct: 1   MSHAAFQTAQIMLINTQHPVKPKGLPSLPTPKVKPVGPTQLVVRKIWRGVAVPAPLKVSA 60

Query: 61  STPSSSSSSSGVSYGDSIALLERCFANPSAPASSSFGPVMKG-QYGALGSVTLEKSKLDL 120
           S+ SSSSSSS V+  DS+ LLERCF  P AP ++  GPVMKG +YGALG+VTLEKSKL+L
Sbjct: 61  SSSSSSSSSSAVAGEDSMTLLERCFVAPPAPGTT--GPVMKGGKYGALGAVTLEKSKLNL 120

Query: 121 SQKQSKSSPETAIGGGGGDIGKKINHGGGDGGDDDG-DDDDYYDEFDDGDEGDEGGLFRR 180
           SQKQSKSSPETA+GGGGGDIGK +NHGGGDGGDD+G DDD+Y+D+FD+GDEGDEGGLFRR
Sbjct: 121 SQKQSKSSPETAVGGGGGDIGKNLNHGGGDGGDDNGGDDDEYFDDFDEGDEGDEGGLFRR 180

Query: 181 RKFLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEMMLTEYLSQGLVSSAQMVKFLAMN 240
           R  LEELFDRKFVDAVLNEWQKT+MDLPAGFRQAYEM        GLVSSAQMVKFLA+N
Sbjct: 181 RMVLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEM--------GLVSSAQMVKFLAIN 240

Query: 241 ARPTTTRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQ 300
           ARPTT R I R+LP+GISRAFIGRM+ADPAFLYRLLLEQAATIG +  WE+KNR++RIKQ
Sbjct: 241 ARPTTNRLIYRSLPEGISRAFIGRMIADPAFLYRLLLEQAATIGFAVRWELKNRRERIKQ 300

Query: 301 EWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDL 360
           EWDLAL+NVLTV ACNAIVVWSLAPCRSYGNTF+FDLQNTLQKLPNNIFEKSYP+REFDL
Sbjct: 301 EWDLALVNVLTVAACNAIVVWSLAPCRSYGNTFQFDLQNTLQKLPNNIFEKSYPLREFDL 360

Query: 361 QKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKQERLSVSVPTVSTNALGYGAFLGL 420
           QKR+HSFFYKAA+LCMVG+TAGA QG+LSNFL+SKK+ RLSV++P+  TNALGYGAFLGL
Sbjct: 361 QKRVHSFFYKAAQLCMVGLTAGALQGSLSNFLASKKEGRLSVTIPSARTNALGYGAFLGL 420

Query: 421 YANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSS 480
           YANLRYQLLCGFD+ MIN+FDVIGV LFFS+ALR+LNVQLGE SRLAWLGVEADPL QS 
Sbjct: 421 YANLRYQLLCGFDKTMINYFDVIGVGLFFSTALRILNVQLGESSRLAWLGVEADPLAQSE 480

Query: 481 DLLKKVYNRPSEDVSRSSSKWFISKNAIISGLGLLGLKQTGADSVSEGESVPPKARRKRI 539
           +LL K YNRPSE+V +SSSKWFISKNAIISGLGLLG+KQ+  DS ++GES  P+ARRKRI
Sbjct: 481 NLL-KAYNRPSENVDQSSSKWFISKNAIISGLGLLGIKQSNVDSAADGESSAPRARRKRI 538

[Close]

BLAST of Lsi03G008660 vs. TrEMBL
Match: F6H966_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01370 PE=4 SV=1)

HSP 1 Score: 765.8 bits (1976), Expect = 3.6e-218
Identity = 396/487 (81.31%), Postives = 435/487 (89.32%), Query Frame = 1


Query: 58  SSSSGVSYGDSIALLERCF-----ANPSAPASSSFGPVMKGQYGALGSVTLEKSKLDLSQ 117
           +SSS +  GDS+ALLERCF     + PS+ AS+   PVMKG+YG+ G+VTLEKSKLDLSQ
Sbjct: 44  ASSSALVDGDSVALLERCFLADSASVPSSSASAMPLPVMKGKYGSFGAVTLEKSKLDLSQ 103

Query: 118 KQSKSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKF 177
           KQS+ SPETAIGGGGGDIGK+IN+GGGDGGDDDGDDDDY+D+FDDGDEGDEGGLFRRR  
Sbjct: 104 KQSRLSPETAIGGGGGDIGKRINNGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRLV 163

Query: 178 LEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEMMLTEYLSQGLVSSAQMVKFLAMNARP 237
           LEELFDRKFVDAVLNEWQKT+MDLPAG RQAYEM        GLVSSAQMVKFLA+NARP
Sbjct: 164 LEELFDRKFVDAVLNEWQKTMMDLPAGLRQAYEM--------GLVSSAQMVKFLAINARP 223

Query: 238 TTTRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWD 297
           TT RFISRTLPQG+SRAFIGRM+ADPAF YRLLLEQ  TIGCS WWE+KNRK+RIKQEWD
Sbjct: 224 TTARFISRTLPQGMSRAFIGRMIADPAFAYRLLLEQVTTIGCSVWWELKNRKERIKQEWD 283

Query: 298 LALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKR 357
           LALINVLTV+ACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYP+REFDLQKR
Sbjct: 284 LALINVLTVSACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPLREFDLQKR 343

Query: 358 IHSFFYKAAELCMVGITAGAAQGALSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYAN 417
           IHSFFYKAAE CMVG+TAGAAQGAL+NF +SKK++RLSV++PTVSTNALGYGAFLGLYAN
Sbjct: 344 IHSFFYKAAEFCMVGLTAGAAQGALTNFAASKKKDRLSVTIPTVSTNALGYGAFLGLYAN 403

Query: 418 LRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDLL 477
           LRYQLLCG DR MINHFDVIGVALFFS+ALR+LNVQLGE SRLAWLGVEADPL QS +LL
Sbjct: 404 LRYQLLCGVDRVMINHFDVIGVALFFSTALRILNVQLGETSRLAWLGVEADPLAQSDNLL 463

Query: 478 KKVYNRPSEDVSRSSSKWFISKNAIISGLGLLGLKQTGADSVSEGESVPPKARRKRIVRK 537
           K  YNRPSE  + SSSKWFISK AI+SGLGLLG+KQ   DSV+  ES PPKARRKR++RK
Sbjct: 464 K-AYNRPSEGAAESSSKWFISKKAIVSGLGLLGIKQGTGDSVANQESSPPKARRKRVIRK 521

Query: 538 KVTAGSS 540
           KVT  S+
Sbjct: 524 KVTTTSA 521

[Close]

BLAST of Lsi03G008660 vs. TrEMBL
Match: A0A0D2TWX3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G041900 PE=4 SV=1)

HSP 1 Score: 764.6 bits (1973), Expect = 8.0e-218
Identity = 411/547 (75.14%), Postives = 454/547 (83.00%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLPTNKLWLPSVVKLGPCHRNRAVLVVKAFTTSTPSTPSSSSSS 60
           MSH +FQT+        LP   L  PS+      HR    L                SSS
Sbjct: 1   MSHIMFQTSP-------LPKTLLLKPSLPPPPGKHRKNLTL--------------RCSSS 60

Query: 61  SGVSYGDS-IALLERCFANPSAPASSS------FGPVMKG-QYGALGSVTLEKSKLDLSQ 120
           S +  G+S +A LERCF  P AP  S+       GPVMKG QYGA G+VTLEK KLDLSQ
Sbjct: 61  SLIDGGESSVASLERCFLAPPAPVESASSGSGEVGPVMKGGQYGAFGAVTLEKGKLDLSQ 120

Query: 121 KQSKSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKF 180
           KQS SSPE A GGGGGDIGKKINHGGGDGGDDDGDDDDY+D+FDD  EG+EGGLFR+R F
Sbjct: 121 KQSTSSPELATGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDDGEGEEGGLFRKRMF 180

Query: 181 LEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEMMLTEYLSQGLVSSAQMVKFLAMNARP 240
           LEELFDRKFVDAVLNEW KT+MDLPAGFRQAYEM        GLVSSAQMVKFLA+NARP
Sbjct: 181 LEELFDRKFVDAVLNEWHKTMMDLPAGFRQAYEM--------GLVSSAQMVKFLAINARP 240

Query: 241 TTTRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWD 300
           TT+RFISRTLPQG+SRAFIGRMLADPAFLYRLLLE+AATIG S WWE+KNRKDRIKQEWD
Sbjct: 241 TTSRFISRTLPQGMSRAFIGRMLADPAFLYRLLLEEAATIGSSVWWEVKNRKDRIKQEWD 300

Query: 301 LALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKR 360
           LAL+NVLTV ACNA+VVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFE+SYP+REFDLQKR
Sbjct: 301 LALMNVLTVAACNALVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPLREFDLQKR 360

Query: 361 IHSFFYKAAELCMVGITAGAAQGALSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYAN 420
           IHS FYKAAELC+VG+TAGA QG+LSNFL+SKK+E+LSV++P++STNALGYGAFLGLYAN
Sbjct: 361 IHSLFYKAAELCIVGLTAGAVQGSLSNFLASKKKEKLSVTIPSMSTNALGYGAFLGLYAN 420

Query: 421 LRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDLL 480
           LRYQLLCGFD+AM+NHFDVIGVALFFS+ALRVLNVQLGERSRLAWLGVE DPLVQS DLL
Sbjct: 421 LRYQLLCGFDQAMVNHFDVIGVALFFSTALRVLNVQLGERSRLAWLGVEVDPLVQSDDLL 480

Query: 481 KKVYNRPSEDVSRSSSKWFISKNAIISGLGLLGLKQTGADSVSEGESVPPKARRKRIVRK 540
            K YNRPSED +RSSSKWFISKNAI+SGLGLLG++Q  A+S +  E+  PKARRKRIVRK
Sbjct: 481 -KAYNRPSEDGTRSSSKWFISKNAIVSGLGLLGIRQGNAESAANEETRAPKARRKRIVRK 517

[Close]

BLAST of Lsi03G008660 vs. TAIR10
Match: AT5G24690.1 (AT5G24690.1 Protein of unknown function (DUF3411))

HSP 1 Score: 688.3 bits (1775), Expect = 3.7e-198
Identity = 371/555 (66.85%), Postives = 433/555 (78.02%), Query Frame = 1


Query: 1   MSHAVFQTA----QIMPINTQLPTNKLWLPSVVKLGPCHRNRAVLVVKAFTTSTPSTPSS 60
           MSH VFQ+      + P+   LP     +P  +   PC   R  +               
Sbjct: 1   MSHMVFQSVVAPKPLSPLKPCLP-----IPRPLVTLPCKLRRGFV--------------- 60

Query: 61  SSSSSGVSYGDSIALLERCFANPSA-----------PASSSFGPVMKGQYGALGSVTLEK 120
            +SSS     DS++ LERC   PS             AS+   PVMKG++G++G+VTLEK
Sbjct: 61  RASSSSFLVDDSVSGLERCLQLPSGVELGTSSSGSFSASTQMCPVMKGKFGSVGAVTLEK 120

Query: 121 SKLDLSQKQSKSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGG 180
            KLD++QK S++SPE A GGGGG+IGK IN+GGGDGGDD+GDDDDY+DEFDDGDEGD+ G
Sbjct: 121 GKLDMTQKISETSPEIATGGGGGNIGKSINNGGGDGGDDNGDDDDYFDEFDDGDEGDDDG 180

Query: 181 LFRRRKFLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEMMLTEYLSQGLVSSAQMVKF 240
           LFRRR FL E+FDRKFVDAVLNEWQKT+MDLPAG RQAYEM        GLVSSAQMVKF
Sbjct: 181 LFRRRMFLAEIFDRKFVDAVLNEWQKTMMDLPAGLRQAYEM--------GLVSSAQMVKF 240

Query: 241 LAMNARPTTTRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKD 300
           LA+NARPTTTR ISR LPQG+SRAF+GRMLADPAFLY+LLLEQAAT+GCS WWE+KNRK+
Sbjct: 241 LAINARPTTTRMISRALPQGLSRAFVGRMLADPAFLYKLLLEQAATVGCSVWWEVKNRKN 300

Query: 301 RIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMR 360
           R+K+EWDLALINVLTV+ACNA  VW LAPCRSYGNTFRFDLQNTLQKLPNN+FE SYP+R
Sbjct: 301 RLKEEWDLALINVLTVSACNAAAVWLLAPCRSYGNTFRFDLQNTLQKLPNNLFEMSYPLR 360

Query: 361 EFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKQERLSVSVPTVSTNALGYGA 420
           EFDLQKR HS FYKAAEL ++G+ AG  QG+LSN L+ KK+ R+SV+VP++STNALGYGA
Sbjct: 361 EFDLQKRFHSLFYKAAELSILGLAAGTLQGSLSNVLAGKKKNRVSVTVPSISTNALGYGA 420

Query: 421 FLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPL 480
           FLG+YANLRYQLLCGF+R + +HFDVIGVALFF +ALR++NVQLGE+SR  WLGVEADPL
Sbjct: 421 FLGIYANLRYQLLCGFERGVSSHFDVIGVALFFGTALRIMNVQLGEKSRQVWLGVEADPL 480

Query: 481 VQSSDLLKKVYNRPSED-VSRSSSKWFISKNAIISGLGLLGLKQTGADSVSEGESVPPKA 540
            QS DLL K YNRPSE+ V++ SSKWFISKNAI+SGL  LG KQ   DSVS+  S PPKA
Sbjct: 481 AQSDDLLAKAYNRPSEEAVAKPSSKWFISKNAIVSGL--LGKKQE--DSVSD--SPPPKA 521

[Close]

BLAST of Lsi03G008660 vs. TAIR10
Match: AT5G22790.1 (AT5G22790.1 reticulata-related 1)

HSP 1 Score: 86.7 bits (213), Expect = 4.9e-17
Identity = 103/400 (25.75%), Postives = 169/400 (42.25%), Query Frame = 1


Query: 71  LLERCFANPSAPASSSFGPVMKGQYGALGSVTLEKSKLDLSQKQSKSSPETAIGGGGGDI 130
           L  RC  +       S   +    Y  +   TL   + +L             GGG G  
Sbjct: 59  LRNRCVGSDVVTGEISGRSIPDWAYSGVKDETLSDLEPELDDGDGGDENGNNDGGGNGGN 118

Query: 131 GKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQ 190
           G     GGG GGD +GDD +  DE D  +E + G + +              + V+ E +
Sbjct: 119 GD----GGGGGGDGEGDDGE--DEADKAEEKEFGPILK-------------FEEVMKETE 178

Query: 191 KTVMDLPAGFRQAYEMMLTEYLSQGLVSSAQMVKFLAMNARPTTTRFISRTLPQGISRAF 250
           +  + LP       E ML    S G +    ++++L +        F+ R+         
Sbjct: 179 RRGITLP-------EDMLEAAKSVG-IRKLFLLRYLDLQGSVWPLGFLMRSCAM-----L 238

Query: 251 IGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVW 310
             RMLADP+FL+++  E A    C+ + E++ R +    E++L   ++L     +  +V 
Sbjct: 239 RNRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVG 298

Query: 311 SLAPCRSYG-----NTFRF-DLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC 370
            LAP    G     +T  F DL+     LP+++FE   P  +F + +RI +FFYK     
Sbjct: 299 LLAPYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYG 358

Query: 371 MVGITAGAAQGALSNFL----SSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCG 430
            VG   G     ++N +     S K+    V +P +  +A  +G FLGL +N RYQ++ G
Sbjct: 359 SVGFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQIING 418

Query: 431 FDRAMINHF---DVIGVALFFSSALRVLNVQLGERSRLAW 458
            +R +        +  VA+ F+  +R  N   G    + W
Sbjct: 419 LERVVEGSTAAKRIPVVAMAFTVGVRFANNVYGGMQFVDW 426

[Close]

BLAST of Lsi03G008660 vs. TAIR10
Match: AT3G56140.1 (AT3G56140.1 Protein of unknown function (DUF399 and DUF3411))

HSP 1 Score: 83.6 bits (205), Expect = 4.2e-16
Identity = 73/259 (28.19%), Postives = 112/259 (43.24%), Query Frame = 1


Query: 177 FDRKFVDAVLNEWQKTVMDLPAGFRQAYEMMLTEYLSQGLVSSAQMVKFLAMNARPTTTR 236
           FDR  +  V+N   +    LP   +   ++        GLVS   +     +   P  + 
Sbjct: 418 FDRAEIARVMNAAGRRRDALPPDIQNGLDL--------GLVSPEVLQNLFDLEQYPLISE 477

Query: 237 FISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALI 296
              R       + F  R+LADP FL RL +E+A +I  +   + + RK+   +E D  + 
Sbjct: 478 LTQRF------QGFRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVIT 537

Query: 297 NVLTVTACNAIVVWSLAPCRSY--------GNTFRFDLQNTLQKLPNNIFEKSYPMREFD 356
           + +  +  +   VW  AP  S+        G      L+  L  +P+N F+KS   RE++
Sbjct: 538 DTVRGSVVDFFTVWLPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWN 597

Query: 357 LQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSK----KQERLSVSVPTVS---TNAL 416
           L  RI S      +L  VG+ +  A    SN L+      K E +    P  S     A+
Sbjct: 598 LNLRIASVIVGGLKLAGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAM 657

Query: 417 GYGAFLGLYANLRYQLLCG 421
            YG FLG  ANLRYQ++ G
Sbjct: 658 VYGGFLGTSANLRYQIIAG 662

[Close]

BLAST of Lsi03G008660 vs. TAIR10
Match: AT2G40400.1 (AT2G40400.1 Protein of unknown function (DUF399 and DUF3411))

HSP 1 Score: 80.1 bits (196), Expect = 4.6e-15
Identity = 68/244 (27.87%), Postives = 111/244 (45.49%), Query Frame = 1


Query: 193 VMDLPAGFRQAYEMMLTEYLSQGLVSSAQMVKFLAMNARPTTTRFISRTLPQGISRAFIG 252
           VM+     R A    + + L  GLVS   +  F  +   P  +    R       + F  
Sbjct: 417 VMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRF------QGFRE 476

Query: 253 RMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSL 312
           R+LADP FL RL +E+A +I  +   + + RK+   +E D  + + +  +  +   VW  
Sbjct: 477 RLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWLP 536

Query: 313 APCRSY--------GNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC 372
           AP  S+        G      L+  L  +P+N F+KS   +E+ L  RI S      +L 
Sbjct: 537 APTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKLA 596

Query: 373 MVGITAG-AAQGALSNFLSSKKQERLSVSV-------PTVSTNALGYGAFLGLYANLRYQ 421
            VG+ +  AA G+ +   + +K  +  + V       P + T AL YG +LG  +N+RYQ
Sbjct: 597 GVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKT-ALVYGGYLGTSSNIRYQ 653

[Close]

BLAST of Lsi03G008660 vs. TAIR10
Match: AT2G37860.3 (AT2G37860.3 Protein of unknown function (DUF3411))

HSP 1 Score: 71.2 bits (173), Expect = 2.1e-12
Identity = 81/317 (25.55%), Postives = 138/317 (43.53%), Query Frame = 1


Query: 125 GGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDA 184
           GGGG        GGG+GG+ DG+ +DY       +E + G + +              + 
Sbjct: 122 GGGG--------GGGNGGEGDGEGEDY-------EEKEFGPILK-------------FEE 181

Query: 185 VLNEWQKTVMDLPAGFRQA------YEMMLTEYLSQGLVSSAQMVKFLAMNARPTTTRFI 244
           V+ E +     LP+   +A       +++L  YL   L SSA ++ F             
Sbjct: 182 VMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLD--LQSSAGLLGFAIR---------- 241

Query: 245 SRTLPQGISRAFI-GRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALIN 304
                   S A +  RMLADP+FL+++  E      C+   E++ R      E++L + +
Sbjct: 242 --------SWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVAD 301

Query: 305 VLTVTACNAIVVWSLAPCRSYGNT-----FRFDLQNTLQKLPNNIFEKSYPMREFDLQKR 364
           +L  T  N  +V  LAP   +G       F   +      LP+++FE   P   F  Q+R
Sbjct: 302 LLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQR 361

Query: 365 IHSFFYKAAELCMVGITAGAAQGALSNFLSSKK----QERLSVSVPTVSTNALGYGAFLG 424
           + ++FYK      VG   G     ++N + + K    +   ++ VP +  +A  +G FL 
Sbjct: 362 LATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINKSEENIPVPPLIKSAALWGVFLS 390

Query: 425 LYANLRYQLLCGFDRAM 426
           + +N RYQ++ G +R +
Sbjct: 422 VSSNTRYQIINGLERVV 390

[Close]

BLAST of Lsi03G008660 vs. NCBI nr
Match: gi|659097051|ref|XP_008449416.1| (PREDICTED: uncharacterized protein LOC103491309 [Cucumis melo])

HSP 1 Score: 953.4 bits (2463), Expect = 1.7e-274
Identity = 501/548 (91.42%), Postives = 518/548 (94.53%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLPTNKLWLPSVVKLGPCHRNRAVLVVKAFTTSTPSTPSSSSSS 60
           MSHAVFQTAQIMPINTQL TNKLWLPSVVKLGP +RNRAVLVVKAFTTS+PS+PSSSSS 
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNKLWLPSVVKLGPSYRNRAVLVVKAFTTSSPSSPSSSSS- 60

Query: 61  SGVSYGDSIALLERCFANPSAPA---------SSSFGPVMKGQYGALGSVTLEKSKLDLS 120
            GV YGDSIA LERCF  PSAPA         SSSFGPVMKGQ+GALGSVTLEKSKLDLS
Sbjct: 61  -GVPYGDSIAFLERCFETPSAPAGSDPFLAISSSSFGPVMKGQFGALGSVTLEKSKLDLS 120

Query: 121 QKQSKSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK 180
           QKQSKSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK
Sbjct: 121 QKQSKSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK 180

Query: 181 FLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEMMLTEYLSQGLVSSAQMVKFLAMNAR 240
           FLEELFDRKFVDAVLNEWQKT+MDLPAGFRQAYEM        GLVSSAQMV+FLA+NAR
Sbjct: 181 FLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEM--------GLVSSAQMVRFLAVNAR 240

Query: 241 PTTTRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEW 300
           PTTTRFISR LPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEW
Sbjct: 241 PTTTRFISRALPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEW 300

Query: 301 DLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQK 360
           DLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQK
Sbjct: 301 DLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQK 360

Query: 361 RIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYA 420
           RIHSFFYKAAELC+VGITAGAAQG LSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYA
Sbjct: 361 RIHSFFYKAAELCLVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYA 420

Query: 421 NLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDL 480
           NLRYQLLCGFDRAMINHFDVIGVALF SSA+RVLNVQLGERSRLAWLG+EADPLVQS +L
Sbjct: 421 NLRYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSREL 480

Query: 481 LKKVYNRPSEDVSRSSSKWFISKNAIISGLGLLGLKQTGADSVSEGESVPPKARRKRIVR 540
           L+KVYNRPSED+++SSSKWFISKNAIISGLGLLGLKQ+GADSVSEGESV PKARRKRIVR
Sbjct: 481 LQKVYNRPSEDINQSSSKWFISKNAIISGLGLLGLKQSGADSVSEGESV-PKARRKRIVR 537

[Close]

BLAST of Lsi03G008660 vs. NCBI nr
Match: gi|449444691|ref|XP_004140107.1| (PREDICTED: uncharacterized protein LOC101205574 [Cucumis sativus])

HSP 1 Score: 924.9 bits (2389), Expect = 6.6e-266
Identity = 487/548 (88.87%), Postives = 507/548 (92.52%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLPTNKLWLPSVVKLGPCHRNRAVLVVKAFTTSTPSTPSSSSSS 60
           MSHAVFQTAQIMPINTQL TN LWLP+VVKLGP +RNRAVLVVKAFT S PS     SSS
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPS-----SSS 60

Query: 61  SGVSYGDSIALLERCFANPSAPA---------SSSFGPVMKGQYGALGSVTLEKSKLDLS 120
           SGVSYGDSI+ LERCF     PA         SSSFGPVMKG+YGA G+VTLEKSKLDLS
Sbjct: 61  SGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLS 120

Query: 121 QKQSKSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK 180
           QKQSKSSPE AIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK
Sbjct: 121 QKQSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRK 180

Query: 181 FLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEMMLTEYLSQGLVSSAQMVKFLAMNAR 240
           FLEELFDRKFVDAVLNEWQKT+MDLPAGFRQAYEM        GLVSSAQMV+FLA+NAR
Sbjct: 181 FLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEM--------GLVSSAQMVRFLAVNAR 240

Query: 241 PTTTRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEW 300
           PTTTRFISR+LPQGISRAFIGRMLADP+FLY+LLLEQAATIGC+AWWEIKNRKDRIKQEW
Sbjct: 241 PTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEW 300

Query: 301 DLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQK 360
           DLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQK
Sbjct: 301 DLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQK 360

Query: 361 RIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYA 420
           RIHSFFYKAAELCMVGITAGAAQG LSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYA
Sbjct: 361 RIHSFFYKAAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYA 420

Query: 421 NLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDL 480
           NLRYQLLCGFDRAMINHFDVIGVALF SSA+RVLNVQLGERSRLAWLG+EADPLVQS +L
Sbjct: 421 NLRYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSREL 480

Query: 481 LKKVYNRPSEDVSRSSSKWFISKNAIISGLGLLGLKQTGADSVSEGESVPPKARRKRIVR 540
           L+KVYNRPS+ VS+SSSKWFISKNAIISGLGLLGLKQ+G DSVSEGESV PKARRKRIVR
Sbjct: 481 LEKVYNRPSQGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESV-PKARRKRIVR 534

[Close]

BLAST of Lsi03G008660 vs. NCBI nr
Match: gi|1009151665|ref|XP_015893670.1| (PREDICTED: protein RETICULATA-RELATED 1, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 825.5 bits (2131), Expect = 5.5e-236
Identity = 443/558 (79.39%), Postives = 477/558 (85.48%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLPTNKLWLPSVVKLGP---C-------------HRNRAVLVVK 60
           MSHAVFQTAQIMPINTQLP     L SV    P   C             HR R   VVK
Sbjct: 1   MSHAVFQTAQIMPINTQLPVKHNSLSSVSLSSPKLVCPNQLVTAQPAGGKHR-RGGPVVK 60

Query: 61  AFTTSTPSTPSSSSSSSGVSYGDSIALLERCFANPS----APASSSFGPVMKGQYGALGS 120
           AF    PS+ SSSSSS G+  GDS+ LLERCFA PS    APASSS GPVMKGQYGA G+
Sbjct: 61  AFVAPPPSS-SSSSSSGGLVDGDSMTLLERCFAAPSVSGGAPASSSLGPVMKGQYGAFGA 120

Query: 121 VTLEKSKLDLSQKQSKSSPETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDE 180
           VTLEK KLD+SQKQSKSSPETA+GGGGGDIGKKINHGGGDGGDDDGDDDDY+D+FDDGDE
Sbjct: 121 VTLEKGKLDMSQKQSKSSPETAVGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDE 180

Query: 181 GDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEMMLTEYLSQGLVSSA 240
           GDEGGLFRRRKFLEELFDRKFVDAVLNEWQKT MDLPAGFRQAYEM        GLVSSA
Sbjct: 181 GDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTFMDLPAGFRQAYEM--------GLVSSA 240

Query: 241 QMVKFLAMNARPTTTRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEI 300
           QMVKFLA+NARPTTTRFISR+LPQ +SRAFIGRMLADPAFLY+LLLEQAATIG S W E+
Sbjct: 241 QMVKFLAINARPTTTRFISRSLPQAVSRAFIGRMLADPAFLYKLLLEQAATIGFSVWSEL 300

Query: 301 KNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEK 360
           KNRKDRIKQEWDLAL+NVLTV ACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFE+
Sbjct: 301 KNRKDRIKQEWDLALVNVLTVAACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFER 360

Query: 361 SYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKQERLSVSVPTVSTNA 420
           SYP+REFDLQKRIHSFFYKAAELCMVG+TAGA QG+LSN+L+SKK+ RLSVS+P+ STNA
Sbjct: 361 SYPLREFDLQKRIHSFFYKAAELCMVGLTAGAVQGSLSNYLASKKEGRLSVSIPSTSTNA 420

Query: 421 LGYGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGV 480
           LGYGAFLGLYAN+RYQLLCG+DRAM NHFDVIGVALFFS+ALRVLNVQLGE SRLAWLGV
Sbjct: 421 LGYGAFLGLYANMRYQLLCGYDRAMFNHFDVIGVALFFSTALRVLNVQLGEASRLAWLGV 480

Query: 481 EADPLVQSSDLLKKVYNRPSEDVSRSSSKWFISKNAIISGLGLLGLKQTGADSVSEGESV 539
           E DPL  S DLL KVYNRPS+D  + SSKWFISK+AI+SGLGLLG+KQ   DSV++GES 
Sbjct: 481 EPDPLAHSDDLL-KVYNRPSQDADQLSSKWFISKSAIVSGLGLLGIKQGNVDSVADGESP 540

[Close]

BLAST of Lsi03G008660 vs. NCBI nr
Match: gi|596287086|ref|XP_007225720.1| (hypothetical protein PRUPE_ppa004314mg [Prunus persica])

HSP 1 Score: 811.2 bits (2094), Expect = 1.1e-231
Identity = 429/540 (79.44%), Postives = 470/540 (87.04%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLPTN-KLWLPSVVKLGPCHRNRAVLVVKAFTTSTPSTPSSSSS 60
           MSHAVFQTAQIMPINTQLPT  KL  P  +++      R  L++KA   + PST      
Sbjct: 1   MSHAVFQTAQIMPINTQLPTKPKLMGPIQLRMS----ERRGLLLKA-NCAAPST------ 60

Query: 61  SSGVSYGDSIALLERCFANPSAPASSSFGPVMKGQYGALGSVTLEKSKLDLSQKQSKSSP 120
            SG   GDS+ALLERCF  PS   +  FGPVMKGQYGALG+VTLEK KLD+SQKQSKSSP
Sbjct: 61  -SGFVDGDSMALLERCFVGPSV--AGGFGPVMKGQYGALGAVTLEKGKLDMSQKQSKSSP 120

Query: 121 ETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDR 180
           ETAIGGGGGDIGK+IN+GGGDGGDDDGDDDDY+D+FDDGDEGDEGGLFRRR FLEELFDR
Sbjct: 121 ETAIGGGGGDIGKRINNGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRMFLEELFDR 180

Query: 181 KFVDAVLNEWQKTVMDLPAGFRQAYEMMLTEYLSQGLVSSAQMVKFLAMNARPTTTRFIS 240
           KFVDAVLNEWQKT+MDLPAGFRQAYEM        GL+SSAQMVKFLA NARPTTTRFIS
Sbjct: 181 KFVDAVLNEWQKTMMDLPAGFRQAYEM--------GLISSAQMVKFLATNARPTTTRFIS 240

Query: 241 RTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVL 300
           R LP GISRAFIGRMLADPAFLYR LLEQAATIG S WWE+KNRK RIKQEWDLALINVL
Sbjct: 241 RALPDGISRAFIGRMLADPAFLYRFLLEQAATIGSSVWWELKNRKGRIKQEWDLALINVL 300

Query: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYK 360
           TVTACNAIVVWSLAPCRSYGNTF+FDLQNTLQKLPNNIFEKSYP+REFDLQKR+HSFFYK
Sbjct: 301 TVTACNAIVVWSLAPCRSYGNTFKFDLQNTLQKLPNNIFEKSYPLREFDLQKRVHSFFYK 360

Query: 361 AAELCMVGITAGAAQGALSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420
           AAELCMVG+TAGA QG+LSNFL+ KK+ RLSV++P+V  NALGYGAFLGLYANLRYQLLC
Sbjct: 361 AAELCMVGLTAGAVQGSLSNFLAHKKEGRLSVTIPSVKANALGYGAFLGLYANLRYQLLC 420

Query: 421 GFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDLLKKVYNRP 480
           GFDRA++NHFDVIGVALF S+ LR+LNVQ+GERSRLAWLGVEADPLV S DLL KVY+RP
Sbjct: 421 GFDRAVMNHFDVIGVALFLSTTLRLLNVQVGERSRLAWLGVEADPLVDSDDLL-KVYSRP 480

Query: 481 SEDVSRSSSKWFISKNAIISGLGLLGLKQTGADSVSEGESVPPKARRKRIVRKKVTAGSS 540
           S+++ R SSKWFISKNAI+SGLGLLG+KQ  ADSV++GES  PK RRKRIVRKKVTA S+
Sbjct: 481 SDNLERPSSKWFISKNAIVSGLGLLGIKQGNADSVADGESSTPKTRRKRIVRKKVTASSA 517

[Close]

BLAST of Lsi03G008660 vs. NCBI nr
Match: gi|645223799|ref|XP_008218806.1| (PREDICTED: uncharacterized protein LOC103319089 [Prunus mume])

HSP 1 Score: 810.4 bits (2092), Expect = 1.8e-231
Identity = 429/540 (79.44%), Postives = 469/540 (86.85%), Query Frame = 1


Query: 1   MSHAVFQTAQIMPINTQLPTN-KLWLPSVVKLGPCHRNRAVLVVKAFTTSTPSTPSSSSS 60
           MSHAVFQTAQIMPINTQLPT  KL  P  +++      R  LV+KA   + PST      
Sbjct: 1   MSHAVFQTAQIMPINTQLPTKPKLMGPIQLRMS----ERRGLVLKA-NCAAPST------ 60

Query: 61  SSGVSYGDSIALLERCFANPSAPASSSFGPVMKGQYGALGSVTLEKSKLDLSQKQSKSSP 120
            SG   GDS+ALLERCF  PS   +  FGPVMKGQYGALG+VTLEK KLD+SQKQSKSSP
Sbjct: 61  -SGFVDGDSMALLERCFVGPSV--TGGFGPVMKGQYGALGAVTLEKGKLDMSQKQSKSSP 120

Query: 121 ETAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDR 180
           ETAIGGGGGDIGK+IN+GGGDGGDDDGDDDDY+D+FDDGDEGDEGGLFRRR FLEELFDR
Sbjct: 121 ETAIGGGGGDIGKRINNGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRMFLEELFDR 180

Query: 181 KFVDAVLNEWQKTVMDLPAGFRQAYEMMLTEYLSQGLVSSAQMVKFLAMNARPTTTRFIS 240
           KFVDAVLNEWQKT+MDLPAGFRQAYEM        GL+SSAQMVKFLA NARPTTTRFIS
Sbjct: 181 KFVDAVLNEWQKTMMDLPAGFRQAYEM--------GLISSAQMVKFLATNARPTTTRFIS 240

Query: 241 RTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVL 300
           R LP GISRAFIGRMLADPAFLYR LLEQAATIG S WWE+KNRK RIKQEWDLALINVL
Sbjct: 241 RALPDGISRAFIGRMLADPAFLYRFLLEQAATIGSSVWWELKNRKGRIKQEWDLALINVL 300

Query: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYK 360
           TVTACNAIVVWSLAPCRSYGNTF+FDLQNTLQKLPNNIFEKSYP+REFDLQKR+HSFFYK
Sbjct: 301 TVTACNAIVVWSLAPCRSYGNTFKFDLQNTLQKLPNNIFEKSYPLREFDLQKRVHSFFYK 360

Query: 361 AAELCMVGITAGAAQGALSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420
           AAELCMVG+TAGA QG+LSNFL+ KK+ RLSV++P+V  NALGYGAFLGLYANLRYQLLC
Sbjct: 361 AAELCMVGLTAGAVQGSLSNFLAHKKEGRLSVTIPSVKANALGYGAFLGLYANLRYQLLC 420

Query: 421 GFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDLLKKVYNRP 480
           GFDRA++NHFDVIGV LF S+ LR+LNVQ+GERSRLAWLGVEADPLV S DLL KVY+RP
Sbjct: 421 GFDRAVMNHFDVIGVPLFLSTTLRLLNVQVGERSRLAWLGVEADPLVDSDDLL-KVYSRP 480

Query: 481 SEDVSRSSSKWFISKNAIISGLGLLGLKQTGADSVSEGESVPPKARRKRIVRKKVTAGSS 540
           S+++ R SSKWFISKNAI+SGLGLLG+KQ  ADSV++GES  PK RRKRIVRKKVTA S+
Sbjct: 481 SDNLERPSSKWFISKNAIVSGLGLLGIKQGNADSVADGESSTPKTRRKRIVRKKVTASSA 517

The following BLAST results are available for this feature:

BLAST of Lsi03G008660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RER1_ARATH	8.7e-16	25.75	Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana GN=RER1 PE=1...	[more]
RER6_ARATH	7.4e-15	28.19	Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana GN=RER6 PE=2...	[more]
RER5_ARATH	8.2e-14	27.87	Protein RETICULATA-RELATED 5, chloroplastic OS=Arabidopsis thaliana GN=RER5 PE=2...	[more]
RETIC_ARATH	3.8e-11	25.55	Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana GN=RE PE=1 SV=1	[more]

BLAST of Lsi03G008660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDZ4_CUCSA	4.6e-266	88.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G411290 PE=4 SV=1	[more]
M5XLU6_PRUPE	7.5e-232	79.44	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004314mg PE=4 SV=1	[more]
W9RMD6_9ROSA	2.3e-220	75.41	Uncharacterized protein OS=Morus notabilis GN=L484_024194 PE=4 SV=1	[more]
F6H966_VITVI	3.6e-218	81.31	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01370 PE=4 SV=...	[more]
A0A0D2TWX3_GOSRA	8.0e-218	75.14	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G041900 PE=4 SV=1	[more]

BLAST of Lsi03G008660 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24690.1	3.7e-198	66.85	Protein of unknown function (DUF3411)	[more]
AT5G22790.1	4.9e-17	25.75	reticulata-related 1	[more]
AT3G56140.1	4.2e-16	28.19	Protein of unknown function (DUF399 and DUF3411)	[more]
AT2G40400.1	4.6e-15	27.87	Protein of unknown function (DUF399 and DUF3411)	[more]
AT2G37860.3	2.1e-12	25.55	Protein of unknown function (DUF3411)	[more]

BLAST of Lsi03G008660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097051\|ref\|XP_008449416.1\|	1.7e-274	91.42	PREDICTED: uncharacterized protein LOC103491309 [Cucumis melo]	[more]
gi\|449444691\|ref\|XP_004140107.1\|	6.6e-266	88.87	PREDICTED: uncharacterized protein LOC101205574 [Cucumis sativus]	[more]
gi\|1009151665\|ref\|XP_015893670.1\|	5.5e-236	79.39	PREDICTED: protein RETICULATA-RELATED 1, chloroplastic [Ziziphus jujuba]	[more]
gi\|596287086\|ref\|XP_007225720.1\|	1.1e-231	79.44	hypothetical protein PRUPE_ppa004314mg [Prunus persica]	[more]
gi\|645223799\|ref\|XP_008218806.1\|	1.8e-231	79.44	PREDICTED: uncharacterized protein LOC103319089 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021825	RETICULATA-related

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G008660.1	Lsi03G008660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021825	Protein RETICULATA-related	PFAM	PF11891	DUF3411	coord: 252..420 score: 3.3
None	No IPR available	PANTHER	PTHR31038	FAMILY NOT NAMED	coord: 1..537 score:
None	No IPR available	PANTHER	PTHR31038:SF2	SUBFAMILY NOT NAMED	coord: 1..537 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G008660	Csa6G411290	Cucumber (Chinese Long) v2	culsiB446
Lsi03G008660	CSPI06G22260	Wild cucumber (PI 183967)	cpilsiB454
Lsi03G008660	Cucsa.184720	Cucumber (Gy14) v1	cgylsiB310
Lsi03G008660	CmoCh11G015270	Cucurbita moschata (Rifu)	cmolsiB104
Lsi03G008660	Cla002385	Watermelon (97103) v1	lsiwmB239
Lsi03G008660	MELO3C014379	Melon (DHL92) v3.5.1	lsimeB265
Lsi03G008660	ClCG09G014350	Watermelon (Charleston Gray)	lsiwcgB218
Lsi03G008660	MELO3C014379.2	Melon (DHL92) v3.6.1	lsimedB278
Lsi03G008660	Cla97C09G176720	Watermelon (97103) v2	lsiwmbB254
Lsi03G008660	Bhi05G000572	Wax gourd	lsiwgoB320
Lsi03G008660	CsGy6G021520	Cucumber (Gy14) v2	cgyblsiB411
Lsi03G008660	CsaV3_6G037380	Cucumber (Chinese Long) v3	cuclsiB475

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G008660	Silver-seed gourd	carlsiB590
Lsi03G008660	Silver-seed gourd	carlsiB674
Lsi03G008660	Watermelon (97103) v2	lsiwmbB250
Lsi03G008660	Watermelon (97103) v2	lsiwmbB246
Lsi03G008660	Cucurbita maxima (Rimu)	cmalsiB117
Lsi03G008660	Cucurbita maxima (Rimu)	cmalsiB482
Lsi03G008660	Cucurbita moschata (Rifu)	cmolsiB466
Lsi03G008660	Cucurbita pepo (Zucchini)	cpelsiB206
Lsi03G008660	Cucurbita pepo (Zucchini)	cpelsiB544
Lsi03G008660	Watermelon (Charleston Gray)	lsiwcgB211