CsGy6G021520 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G021520
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein RETICULATA-RELATED 1, chloroplastic
Location	Chr6 : 22125159 .. 22133302 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAACTCGTCTAGGAAACCGGAGTCGACTCAGTGGGTCAATCTCTATTGAAGATAGTGTTCTTCGTCCCTTCCGCAGGCGGCTATCCTTAATCCATTAAAACCCCTTTCTCCACCAACTTTGCTCTTTCTTTTTCTCTCTCTCTGATTTCCCTATTTCTTAGAGAGATTGAGAACCAGAGAATTCGGAATCCGTAATCCGTAATCTTCTTCTTTCTTTCTTCCCCGTTTCAATCTCGATGACCATATAGACAACACACGGGATTCAATTCAACCTCATCCATAGCCGAATATGTCTCATGCGGTGTTTCAAACGGCTCAAATCATGCCCATTAACACCCAGCTTACCACCAACAACCTATGGCTGCCCGCGGTTGTTAAACTCGGTCCCTCCTATCGAAACAGAGCAGTTTTGGTGGTCAAGGCTTTCACAGCTTCTCCTCCTTCTTCCTCTTCTTCGGGTGTTTCTTATGGGGATTCCATTTCTTTTCTGGAGCGTTGCTTTGAAACCTCATTTCCGCCTGCTGGGGTTGACCCTTCTCTTGCCGTATCTTCTTCCTCTTTTGGCCCTGTTATGAAGGGCAAATATGGTGCCTTTGGTGCTGTAACTTTGGAGAAATCCAAGCTTGATTTGTCTCAGAAGCAGTCCAAGTCCAGCCCTGAGGTAAGTTACTTCAGTTTTGCTTTCCTTCACTTGGATTGTGCCTATGCTTTGGTATTGCATGGATTCTTCTAGTCGTGAAATGTTCCATAGTTGGAAAAGCAGATTTATTTATTTATTATTATTATTATTTTTGGCAATATGAACTTTGGTTTTAGCTCCCTTTCTATGAGAAATAGCATTTTCACTTGGAAGTTTTTGTTCCTTGTATTTCTGGCAATTGATTCGGGACGTTTTCCTATCTCAGCCAACTGTTAAACATTTCATTTCAATTGAAATACAGGTCTTCCAAACTTGGTTTTCTATTTCGGTCTGAGAGGCAGTGCTTCTTGTTAAATTTTTTAATCCTATCTTAATTCTTATGGATAGTTGAACAGTAAGTGTCCTAAGTTAGATGTGTAGAACCACTGCCAATCCATTTCCTTTCTTTTTTGAACGAGGGTCTATTAGATCACCGTTAATAAAAATGAGTCCACTTCTCAATAGGTCAGAAATGGATTTGCTAAATACTGATTACTGAATCATATTTCTTGGAGAGAGTTGCAGGACTATCACGAGTAAGCCCAATGGTTATTGGAGGTGTGAAAAGAAAGAAAAAGAAGAGGTAAAGAGCTTAAGAGAGAATGAGTTTGAACTAGTTACCTGCTTAATTCGATGACAAACACATAAAAAGGTTAAACTATTGCCTTATGAGATTAATCGGGTGAGTGTATCTTGGGCACTCACGTATATTATTAAAAAAGATTACAGTCCACTTCTCATGCTTATTTGGTGGACTTAATGAAAACAAGCAAATTTGAAATTGTTTCAAGTTGATGACTTGTACTCTTGTCCAGTTGCCCCCCCTCCCCCCAACCCAGCCCCTTCATGGCAACCATCCTCTTCCCTTTGCTTCACCTTGATGGAGCAGAATTGCTCACAATGCTCCATCACAATTGGTGTTGGATCCTTCTCAATCTTGGTGGTGACGGTTAATAAAGGTAGTCATGCTACTGTACAAAGTTCGAAGAAAATTCTTTTTGCTTCGTCCCTGTGAGCTGAATCTTTCTTGACTGGCTTCTGAAATTCAGCGTTAAAATGTCTGTTAGATTTGCCTCCCACCACCCTTGAACTTTCCAAGGAACATAAAGGTGAAGACTTGTTATTTAGGAAGTAAAGTTTTCAAATGAAGGAGGTTTTTTTATGGAGATGACAAAGTTTTGATGACAATGGTGGAAAAAGAAAAATCATTGAGATTTTTGGAGATGGCACGATAGGTTGGTCATCCTTATTGTCTCTGACTCTAAATTTTCTAGAAAAAAAGTAAGTGCACCATACTCAAGGATACAGTTGTAGCAAGGCCAATCCTTTCATCCTTCTCATAAAGATCAATTGTTGAAAGGTACTATTGGCCTCCTTTTCTCGTCTATGATATCCTTATTCTTTTCTTTTTTTAAAAATGGTATTAATGTTTAATGGCCTAGAGATCTTTGTAGAACACATAATTCCTTCCCATCTGCATATACAGTCCTACGATGGACTGTGCATGTGTCTAAGTGAGACGATGAGGCACTGTTGAGTGTGCCATTGAACTAAATGAACATTTCTCCTCTTCCAAATCCCCCACATTGAAAGCATGGGAAGAGCAATCCGTTTCCATTTAAAGAGAACACATCCATGATTTTGAGGAAAGTCCTTCCAACAAAAAGATCCCTGCTAATAATTTTATTTTACTGGTAGTGGTAACTTATTTTTGTTTAGATTTTTGTGGGGACGGAGAGTTAGGGAGGGACACTCAATGAAACAGATTCGGGCCAATTTATAGTCTGGAAATAAAAATATTCAACCATTTGTCCAGCTTGGATATGGAATTTTCAACTGATGGGTTCCAAAAGGATGGGTCTCAAGGTCTTCTTCAAGAGAGAAACCAAGATACTTGAAGAGAAAAGATTCTGCCTTTCATTCAAACCTCTCTGCTTGCTTTCAACAGATACAAATAGGAGACCGAAAATTCTCTTTTGACCCATATATCTTTATGACCATTGAATACATCTCAAAACAATTTCCTATTATTTCTTTCTAACCAAAGTTGCCAAGAAAATCCCCAAATATTTTCACATCTCTTTATGACCCTGACAAACTTCCAGAACAATCTGTTATTCCTTCTGACTGAAGTTGTCAATAAAAAATCCTAATGGAGCCACATCTCTATATGACGCCTAAAAGCACCTTGAAACATCTTTATTTTTTTTAAACCATAGTTATCAAGAAAAAACCACAACTGACTTATACCTCTTTATGACACCTACAGGCATCCTGATACATGTATCCTTTGTATGCTAAGAAGTTTATTCCGAATATGAAGATGAAGGATCACCGCATACTGTGACAGTATAAAATGTGTTCACCTGAACTACATATAGGAACAATTCAGAAACATCTGATTGACATTGCCAGAGAATTCTCTATGAACCAACTCCCCAATCTCAACCTGAAGAACACAAGGGTCCTAGCTTGTATTTATCACGTGTATCCATTTACAACAAAAAAGGTTCTATGGGAAGAGGGAAACACAGCCTAAAAGCCTAGAAATGAAGGTTCCCTTTCCTTAAATAGGAATCAGAAAAAGCCCACCCAAAGAGGGACACATTTTATATTTTTAGGATACAGTGATCCTTCCCTCTTCATATTGGGTGAAAACAACTTTTCAGGTTGCAAATGGCCTTCTGTCCTTTGGTAAGCCTCATTTTGAATCTCAGAGGCTTCTAGCTTGAAAGAACTCTTAGGTAGACTCACTTTTCTCCAAGCAACCCTTGCCGAATAAGGTGTGCAATCTTTGGAAAAGCTTTTTTCTAAATTTTACTATGGGAAGGAAACGATGACAGCATTAGCTTCCACCCTTTCAAATGGGACAATGTCATGCTTCCAATCAAAGCTAGAAGTGTTGGGATTTGTAACTGATTAACAAGAACAAGCCTCCTCTTGCAAAATGGAATTAACACTTCCTGAATGAGAATAGAATCTTATAAAAGAAAGTCATCAAGGCTTAGTATGGCCGTACTTGCTTATCTTCATCTCTGGGCTCATCATCCTATAGATCCTTTTAGGGGTCTGTGGATTTCTATTATGAGGCATAAGAAGCTGATATTTCATTGACTTCCCTGTAATGTTAGGGATGGGGCACATACCTCTTTTTGTAGTTTTGTTTGGTCAAAGGGCTCCTCCAGCATAAAGCTTCTGTTGGCTTTTTTATTTGACATTAAAAAGGTTTGCACTTGTTAAATACTTTTGGGTGGTGGATTCTAACATTTTGAATTTGCATCTTAGAAGGAATCTCAATGATATTAAATAAAAAAGAATGGACCTCTCTTATACATCTTTTATCCTTCTTGCAACAAACACAAGGCAGTGACAGAATCTTGTGGAAGCTGTGCAATCAAATGGAGATTTTTATCACAGAGCACCAATTATTGAACATTCAAATGGCTATGTTGTGTTTGAAAGATTAAGTTTTTTATTTTTTCCTAAGGTGGTAAGCTTCTATTATATAAGCTCCAACACAAGATGCCTTACATGTGTAGAAACAGCTCAGAGTCTCAAATTCACCTCACCTCTTTGTATCATGCAATTATGCATACAAGTTCTTAAGTGCGGCTCTTATCTAGTTTTGGTTGACCTGTAAAAGGTCAGATGCATTGGATTAGAGCCCTTTTCTGTTTTGAGTTGGCTCCTTTTTGGGTTTTGGTTGCGTATCCCTCTAGTATTTGTTCCCTTTGTCTGATTGGAACTTGGAATTATGGTTTCTCATTACACACAAACAAAGGAAAAATGATTCTAGCCAAGAATTGTCGACTGAAATGTTTTGAGAGTCTTTGTAGTTAAATATACTGATGTTGCTATTTTTATTTCTATTTTTGCACCTCACCCTCCACTTTAGAGCACTATTGCTCTCTATTATGTTTTGTCCTTTTGTTTTCTGCTTACCAAAAGAAAAAAAAATATGTCCTTTGTTTTTTGTTGTCTAGTTATGTTTTTGGTTAGTGGAATTAAGCATGTCTTCTATGTTGTTGGTTGTGTTATTTCATTTTCCCAATTCCAAGTGTTTCAAGCTGAAACAATATCATAACAAATTGCAGCTTGCAATTGGGGGAGGTGGTGGAGATATTGGCAAGAAAATCAATCATGGTGGTGGCGACGGTGGAGACGATGATGGTGATGATGATGATTACTATGATGAGTTTGATGATGGAGACGAGGGAGATGAGGGTGGCTTGTTCCGGAGAAGGAAATTTCTTGAAGAGGTATACAATCTATTACTGACAGATCCGTGTTGCTATTGTTTTTTATGGGCTCATTTTTAGCACTAACTTCGTATTTGCTCTAGCTTTTTGATCGTAAATTTGTAGATGCAGTATTAAACGAGTGGCAGAAGACAATGATGGATTTGCCTGCTGGATTTCGTCAGGCTTATGAAATGGTAGTGTTTTGATTTTCTTATTACTGTGATTATGGGTGGCCATTCAAACTGCAAAACGGAACCGTTTCTTAAAACCAAACCGAACCGAATACTCAATGAAACTGAAAATTTTTGTTCGGCTCGGTTTAAAGAAATTTGAAACCGAATTGAAACTAAACTGATTTGTTTTTAACTAATATATATTTATCTTTATATTTTTATATTTATATATTTAAAAAAAGTAGAATTGAATTAAAACCGAACCACTTTTAATTTAAAGAACAAAACCTAATTTAAAACCGTACCAAACCAAATTATTTTTTAAAATGTTTTAAAATTACCAAAACCAAATTTGAATCGAACCGAACTGCATAAATACGGTTCAGTTTGGTTTGAACCAATAAATCGGTTCGGTTCTGTTTTGTGCCAAACCGATTCGTTTCCACCTCTAAGTGTGATATTTTCTTGTAGGAGTCAGGAAATATTTTATCATTTTTCTTTTGTGCTAAATATTTAGCCTTGAACTTTGGTTAGATGCTGACAAATTATTTATCCCAGGGTTTAGTTAGCTCGGCTCAAATGGTAAGATTCTTAGCAGTGAATGCCAGGCCAACTACAACTCGGTTCATTTCACGATCACTTCCTCAAGGAATCTCACGGGCTTTTATTGGCAGGTGAATTTTTAAAAAATTCTCTGGTAGAGTTTACGAGGCCTTTAATTCTTAAGTAATTCACTTCAATTCTTTTACCAATTCACCATTCTTAGAGAGGTGACATGGGAACTCGCTTACTAGAAGATATTAATTCTCCATTAAGCATCAACATCTTAATATTAGATCCTAAACCTGAATTTAAGCAATTAGATATTGTAATGTCTAATTCTAAATTACCATGAATTCTACTGGATTCTTAAGCTTTCTGACATTACATTTTAGGGATGGTTGCATATATGACAAAATGAGCCAAATTAATAGCCAAAATAGCTTAACTTAAAACTATTTGCAAATATTACAAAATCTAAGTGAAAATTCTCAATACACAATTTCAATCCAAATCACTCATACACAAATTTAGCCCAGATCGATTCATTTCGAACTATTTGCACGTTTTATTTTTTTTCTTAAGTTTTCCTTAATGTTTTTGTCCTTATAGTGTCATTTTTGGTCCATTTAAATAACTTGAACCGTTTTTATTAGTTTCATTTTTTTCTTTAAGTCATTTTTCTTCTATGCATGTTTTATATCACTGACTTGGACCATGAAGGAAGTCTATAAAGTGATTGACAAACTCTTATCACCAATTGAAATCCATTGTTGATAGGAGTCTATTGTTTATTGAATCCTATCATGAAACTTGTGTCACTGTCTAGAATTATGATCACATAGAATTGCCATCTCAAACCCCTTTTCACCTTCCAATTCTCAGTCCTGGGGTCATCTCCTTTGGAAACTTACGGTTTCTTTTCTGCCAAATTTTCTGAAGTAGACATGCGTATGCGTATTTTATATTATAGCAACATATGTATGATAATATTTCTCTATCGATATCTTGCATGTGGAGTGGACCAACAGCTTCATTATACCAACATATGTATGATAATATTTCTCTATCGATATCTTGCATGTGGAAGTGGACCAACGGCTTCACTAGCTTCCTCCTCCCCGTCCTTTTTTTGAGGAAGTAAATTTCAAAACGATAAAATGAACAGTTCAATTTCTTTCATGGTTCCGTACTTGAATTTTTCTTGTACTGATCAGTAGTTTGTTTGAGCGAAAAACTGCATGCACACTTCGAAAAAGAAATATATATTTTCGAACTTTAACATATTGTATAATTGCACAGGATGTTAGCAGATCCTTCCTTTCTCTATAAACTTCTTTTAGAGCAAGCTGCTACAATTGGTTGCGCGGCTTGGTGGGAAATAAAGAATCGCAAGGACAGGTTTGTTATTTAGGCATATGGTTAAACTTTATTTCATTTTCTTAATTTATCTTTTATTTGATTGGCTTACAAATTTGTTGTTTTGTTGTGGTTCCAGGATAAAACAGGAATGGGATCTGGCGCTCATTAATGTTCTCACTGTTACCGCTTGCAATGCTATAGTTGTTTGGTCACTTGCTCCTTGTCGTTCATATGGAAATACATTCCGATTTGATTTGCAAAATACATTACAGAAGCTTCCCAATAATATATTTGAAAAAAGTTATCCTATGAGGGAATTTGACCTACAAAAGAGAATCCATTCCTTCTTCTACAAAGCTGCAGAGTTGTGCATGGTCGGTATAACTGCAGGAGCAGCTCAAGGTGTTTTGTCCAATTTTCTCTCTAGTAAAAAGCAGGAAAGGTAATAGACCACTCCCATTTGGCAAATAGAAGTGCTAATTAAGTTCCCATTTTTTCTTCACTCGGAGTTGCGTATGTGTTTGACAGGTTATCTGTATCAGTTCCAACTGTGAGTACCAATGCTCTCGGGTATGGTGCTTTTCTTGGTCTATATGCAAATCTCCGGTATCAGTTATTATGCGGTTTTGACAGAGCAATGATCAATCATTTTGATGTTATTGGAGTCGCTCTGTTTTTAAGCTCTGCAATGAGGTTCGAACTGATTTTTCCCTTATGAAATATTTTTGGCATTTATTTGTAAAGTCTTAAACATGCCATTTTTTTCCCTTTAAAGTCTCTGGTTTAAACACAATCTTATCCAAAAAGACATTGTTGGGCAAATAATATTTCATAAAACCATATTGGAATTGTATGTAGGGTTTTGAATGTGCAACTAGGAGAAAGATCAAGATTGGCTTGGCTTGGAATAGAGGCAGATCCATTGGTTCAGTCAAGGGAACTCTTGGAGAAGGTTTACAACCGACCTTCTCAAGGCGTTAGTCAATCTTCCTCGAAATGGTTTATTTCAAAGAATGCCATCATTTCTGGCCTTGGACTCCTCGGTCTCAAACAGTCCGGTGTTGATTCCGTCTCTGAAGGTGAATCAGTACCCAAAGCACGGAGGAAGCGAATTGTTCGGAGAAAGGTAACGGCAGGTTCGTCATGA

mRNA sequence

GTTAACTCGTCTAGGAAACCGGAGTCGACTCAGTGGGTCAATCTCTATTGAAGATAGTGTTCTTCGTCCCTTCCGCAGGCGGCTATCCTTAATCCATTAAAACCCCTTTCTCCACCAACTTTGCTCTTTCTTTTTCTCTCTCTCTGATTTCCCTATTTCTTAGAGAGATTGAGAACCAGAGAATTCGGAATCCGTAATCCGTAATCTTCTTCTTTCTTTCTTCCCCGTTTCAATCTCGATGACCATATAGACAACACACGGGATTCAATTCAACCTCATCCATAGCCGAATATGTCTCATGCGGTGTTTCAAACGGCTCAAATCATGCCCATTAACACCCAGCTTACCACCAACAACCTATGGCTGCCCGCGGTTGTTAAACTCGGTCCCTCCTATCGAAACAGAGCAGTTTTGGTGGTCAAGGCTTTCACAGCTTCTCCTCCTTCTTCCTCTTCTTCGGGTGTTTCTTATGGGGATTCCATTTCTTTTCTGGAGCGTTGCTTTGAAACCTCATTTCCGCCTGCTGGGGTTGACCCTTCTCTTGCCGTATCTTCTTCCTCTTTTGGCCCTGTTATGAAGGGCAAATATGGTGCCTTTGGTGCTGTAACTTTGGAGAAATCCAAGCTTGATTTGTCTCAGAAGCAGTCCAAGTCCAGCCCTGAGCTTGCAATTGGGGGAGGTGGTGGAGATATTGGCAAGAAAATCAATCATGGTGGTGGCGACGGTGGAGACGATGATGGTGATGATGATGATTACTATGATGAGTTTGATGATGGAGACGAGGGAGATGAGGGTGGCTTGTTCCGGAGAAGGAAATTTCTTGAAGAGGGTTTAGTTAGCTCGGCTCAAATGGTAAGATTCTTAGCAGTGAATGCCAGGCCAACTACAACTCGGTTCATTTCACGATCACTTCCTCAAGGAATCTCACGGGCTTTTATTGGCAGGATGTTAGCAGATCCTTCCTTTCTCTATAAACTTCTTTTAGAGCAAGCTGCTACAATTGGTTGCGCGGCTTGGTGGGAAATAAAGAATCGCAAGGACAGGATAAAACAGGAATGGGATCTGGCGCTCATTAATGTTCTCACTGTTACCGCTTGCAATGCTATAGTTGTTTGGTCACTTGCTCCTTGTCGTTCATATGGAAATACATTCCGATTTGATTTGCAAAATACATTACAGAAGCTTCCCAATAATATATTTGAAAAAAGTTATCCTATGAGGGAATTTGACCTACAAAAGAGAATCCATTCCTTCTTCTACAAAGCTGCAGAGTTGTGCATGGTCGGTATAACTGCAGGAGCAGCTCAAGGTGTTTTGTCCAATTTTCTCTCTAGTAAAAAGCAGGAAAGGTTATCTGTATCAGTTCCAACTGTGAGTACCAATGCTCTCGGGTATGGTGCTTTTCTTGGTCTATATGCAAATCTCCGGTATCAGTTATTATGCGGTTTTGACAGAGCAATGATCAATCATTTTGATGTTATTGGAGTCGCTCTGTTTTTAAGCTCTGCAATGAGGGTTTTGAATGTGCAACTAGGAGAAAGATCAAGATTGGCTTGGCTTGGAATAGAGGCAGATCCATTGGTTCAGTCAAGGGAACTCTTGGAGAAGGTTTACAACCGACCTTCTCAAGGCGTTAGTCAATCTTCCTCGAAATGGTTTATTTCAAAGAATGCCATCATTTCTGGCCTTGGACTCCTCGGTCTCAAACAGTCCGGTGTTGATTCCGTCTCTGAAGGTGAATCAGTACCCAAAGCACGGAGGAAGCGAATTGTTCGGAGAAAGGTAACGGCAGGTTCGTCATGA

Coding sequence (CDS)

ATGTCTCATGCGGTGTTTCAAACGGCTCAAATCATGCCCATTAACACCCAGCTTACCACCAACAACCTATGGCTGCCCGCGGTTGTTAAACTCGGTCCCTCCTATCGAAACAGAGCAGTTTTGGTGGTCAAGGCTTTCACAGCTTCTCCTCCTTCTTCCTCTTCTTCGGGTGTTTCTTATGGGGATTCCATTTCTTTTCTGGAGCGTTGCTTTGAAACCTCATTTCCGCCTGCTGGGGTTGACCCTTCTCTTGCCGTATCTTCTTCCTCTTTTGGCCCTGTTATGAAGGGCAAATATGGTGCCTTTGGTGCTGTAACTTTGGAGAAATCCAAGCTTGATTTGTCTCAGAAGCAGTCCAAGTCCAGCCCTGAGCTTGCAATTGGGGGAGGTGGTGGAGATATTGGCAAGAAAATCAATCATGGTGGTGGCGACGGTGGAGACGATGATGGTGATGATGATGATTACTATGATGAGTTTGATGATGGAGACGAGGGAGATGAGGGTGGCTTGTTCCGGAGAAGGAAATTTCTTGAAGAGGGTTTAGTTAGCTCGGCTCAAATGGTAAGATTCTTAGCAGTGAATGCCAGGCCAACTACAACTCGGTTCATTTCACGATCACTTCCTCAAGGAATCTCACGGGCTTTTATTGGCAGGATGTTAGCAGATCCTTCCTTTCTCTATAAACTTCTTTTAGAGCAAGCTGCTACAATTGGTTGCGCGGCTTGGTGGGAAATAAAGAATCGCAAGGACAGGATAAAACAGGAATGGGATCTGGCGCTCATTAATGTTCTCACTGTTACCGCTTGCAATGCTATAGTTGTTTGGTCACTTGCTCCTTGTCGTTCATATGGAAATACATTCCGATTTGATTTGCAAAATACATTACAGAAGCTTCCCAATAATATATTTGAAAAAAGTTATCCTATGAGGGAATTTGACCTACAAAAGAGAATCCATTCCTTCTTCTACAAAGCTGCAGAGTTGTGCATGGTCGGTATAACTGCAGGAGCAGCTCAAGGTGTTTTGTCCAATTTTCTCTCTAGTAAAAAGCAGGAAAGGTTATCTGTATCAGTTCCAACTGTGAGTACCAATGCTCTCGGGTATGGTGCTTTTCTTGGTCTATATGCAAATCTCCGGTATCAGTTATTATGCGGTTTTGACAGAGCAATGATCAATCATTTTGATGTTATTGGAGTCGCTCTGTTTTTAAGCTCTGCAATGAGGGTTTTGAATGTGCAACTAGGAGAAAGATCAAGATTGGCTTGGCTTGGAATAGAGGCAGATCCATTGGTTCAGTCAAGGGAACTCTTGGAGAAGGTTTACAACCGACCTTCTCAAGGCGTTAGTCAATCTTCCTCGAAATGGTTTATTTCAAAGAATGCCATCATTTCTGGCCTTGGACTCCTCGGTCTCAAACAGTCCGGTGTTGATTCCGTCTCTGAAGGTGAATCAGTACCCAAAGCACGGAGGAAGCGAATTGTTCGGAGAAAGGTAACGGCAGGTTCGTCATGA

Protein sequence

MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEEGLVSSAQMVRFLAVNARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS

Homology

[Close]

BLAST of CsGy6G021520 vs. NCBI nr
Match: XP_004140107.1 (PREDICTED: uncharacterized protein LOC101205574 [Cucumis sativus] >KGN47925.1 hypothetical protein Csa_6G411290 [Cucumis sativus])

HSP 1 Score: 883.2 bits (2281), Expect = 4.0e-253
Identity = 501/534 (93.82%), Postives = 501/534 (93.82%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY 60
           MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY 60

Query: 61  GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK 120
           GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK
Sbjct: 61  GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK 120

Query: 121 SSPELAIGGXXXDIGKKINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRKFLEE- 180
           SSPELAIGG XXDIGKKIN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRKFLEE 
Sbjct: 121 SSPELAIGGGXXDIGKKINHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRKFLEEL 180

Query: 181 ------------------------------GLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240
                                         GLVSSAQMVRFLAVNARPTTTRFISRSLPQ
Sbjct: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240

Query: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC 300
           GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC
Sbjct: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC 300

Query: 301 NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC 360
           NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC
Sbjct: 301 NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC 360

Query: 361 MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA 420
           MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA
Sbjct: 361 MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA 420

Query: 421 MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS 480
           MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS
Sbjct: 421 MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS 480

Query: 481 QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 504
           QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS
Sbjct: 481 QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 534

[Close]

BLAST of CsGy6G021520 vs. NCBI nr
Match: XP_008449416.1 (PREDICTED: protein RETICULATA-RELATED 1, chloroplastic [Cucumis melo])

HSP 1 Score: 802.4 bits (2071), Expect = 9.0e-229
Identity = 462/537 (86.03%), Postives = 477/537 (88.83%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPP---SSSSSG 60
           MSHAVFQTAQIMPINTQLTTN LWLP+VVKLGPSYRNRAVLVVKAFT S P        G
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNKLWLPSVVKLGPSYRNRAVLVVKAFTTSSPXXXXXXXXG 60

Query: 61  VSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQK 120
           V YGDSI+FLERCFET   PAG DP LA+SSSSFGPVMKG++GA G+VTLEKSKLDLSQK
Sbjct: 61  VPYGDSIAFLERCFETPSAPAGSDPFLAISSSSFGPVMKGQFGALGSVTLEKSKLDLSQK 120

Query: 121 QSKSSPELAIGGXXXDIGKKINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRKFL 180
           QSKSSPE AIG XXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRKFL
Sbjct: 121 QSKSSPETAIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRKFL 180

Query: 181 EE-------------------------------GLVSSAQMVRFLAVNARPTTTRFISRS 240
           EE                               GLVSSAQMVRFLAVNARPTTTRFISR+
Sbjct: 181 EELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRA 240

Query: 241 LPQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTV 300
           LPQGISRAFIGRMLADP+FLY+LLLEQAATIGC+AWWEIKNRKDRIKQEWDLALINVLTV
Sbjct: 241 LPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTV 300

Query: 301 TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA 360
           TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA
Sbjct: 301 TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA 360

Query: 361 ELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF 420
           ELC+VGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF
Sbjct: 361 ELCLVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF 420

Query: 421 DRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQ 480
           DRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELL+KVYNRPS+
Sbjct: 421 DRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLQKVYNRPSE 480

Query: 481 GVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 504
            ++QSSSKWFISKNAIISGLGLLGLKQSG DSVSEGESVPKARRKRIVRRKVTAGSS
Sbjct: 481 DINQSSSKWFISKNAIISGLGLLGLKQSGADSVSEGESVPKARRKRIVRRKVTAGSS 537

[Close]

BLAST of CsGy6G021520 vs. NCBI nr
Match: XP_022155012.1 (protein RETICULATA-RELATED 1, chloroplastic [Momordica charantia])

HSP 1 Score: 743.8 bits (1919), Expect = 3.8e-211
Identity = 435/539 (80.71%), Postives = 463/539 (85.90%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWL---PAVVKLGPSY--RNRAVLVVKAFTASPPSSSS 60
           M+HAVFQTAQIMPINTQL T  LWL   P +VKLGPS   R++ VLVVKAFT S PSSSS
Sbjct: 1   MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSPSSSS 60

Query: 61  SGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLS 120
           S VS GDSI+ LERCF     PA      A SSSS GPVMKG+YG+ G+VTLEKSKLDLS
Sbjct: 61  SAVSDGDSIALLERCFVAPSAPA------ATSSSSLGPVMKGQYGSLGSVTLEKSKLDLS 120

Query: 121 QKQSKSSPELAIGGXXXDIGKKINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRK 180
           QKQSKSSPE AIG XXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRK
Sbjct: 121 QKQSKSSPETAIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRK 180

Query: 181 FLEE-------------------------------GLVSSAQMVRFLAVNARPTTTRFIS 240
           FLEE                               GLVSSAQMV+FLA+NARPTTTRFIS
Sbjct: 181 FLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFIS 240

Query: 241 RSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVL 300
           RSLPQGISRAFIGRMLADP+FLY+LLLEQAATIGC+AWWEIKNRKDRIKQEWDLALINVL
Sbjct: 241 RSLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVL 300

Query: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYK 360
           TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYP+REFDLQKRIHSFFYK
Sbjct: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPLREFDLQKRIHSFFYK 360

Query: 361 AAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420
           AAELCMVGITAGAAQG LSNFLS KK+ERLSVSVPTVSTNALGYGAFLGLYANLRYQLLC
Sbjct: 361 AAELCMVGITAGAAQGALSNFLSRKKEERLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420

Query: 421 GFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRP 480
           GFDRAMI+HFDVIGVALF SSA+RVLNVQLGERSRLAWLG+EADPLVQS +LL++VYNRP
Sbjct: 421 GFDRAMISHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDLLKQVYNRP 480

Query: 481 SQGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 504
           S+GV++ SSKWFISKNAIISGLGLLG+KQ+G DSVSEGES+PKARRKRIVR+KVTAGSS
Sbjct: 481 SEGVNEPSSKWFISKNAIISGLGLLGVKQTGADSVSEGESIPKARRKRIVRKKVTAGSS 533

[Close]

BLAST of CsGy6G021520 vs. NCBI nr
Match: XP_022989621.1 (protein RETICULATA-RELATED 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 683.3 bits (1762), Expect = 6.1e-193
Identity = 404/539 (74.95%), Postives = 429/539 (79.59%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVL-----VVKAFTASPPSSSS 60
           MSHAVFQTAQIMPI+TQL T  LWLP  VKLG   R R VL                   
Sbjct: 1   MSHAVFQTAQIMPIHTQLPTTKLWLPPPVKLGSCQRTRTVLXXXXXXXXXXXXXXXXXXX 60

Query: 61  SGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLS 120
                                               GPVMKGKYGA GAVTLEKSKLD+S
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPVMKGKYGALGAVTLEKSKLDMS 120

Query: 121 QKQSKSSPELAIGGXXXDIGKKINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRK 180
           QKQ++SSPE AIGG XX IGKKI XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRR+
Sbjct: 121 QKQTRSSPETAIGGGXXXIGKKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRQ 180

Query: 181 FLEE-------------------------------GLVSSAQMVRFLAVNARPTTTRFIS 240
           FLEE                               GLVSSAQMV+FLA+NARPTTTRFIS
Sbjct: 181 FLEELFDRKFVDAVLNEWQKTIMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFIS 240

Query: 241 RSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVL 300
           R+LPQGISR+FIGRMLADP+FLY+LLLEQAATIGC AWWEIKNRKDRIKQEWDLALINVL
Sbjct: 241 RTLPQGISRSFIGRMLADPAFLYRLLLEQAATIGCTAWWEIKNRKDRIKQEWDLALINVL 300

Query: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYK 360
           TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNN+FEKSYPMREFDLQKRIHSFFYK
Sbjct: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNLFEKSYPMREFDLQKRIHSFFYK 360

Query: 361 AAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420
           AAELCMVGITAGAAQG LSNFL+ KK++RLSVSVPTVSTNALGYGAFLGLYANLRYQLLC
Sbjct: 361 AAELCMVGITAGAAQGALSNFLAKKKKDRLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420

Query: 421 GFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRP 480
           GFDRAMINHFDVIGVALF SSA+RVLNVQLGERSRLAWLG+EADPLVQS +LL+KVYNR 
Sbjct: 421 GFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDLLQKVYNRR 480

Query: 481 SQGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 504
           S+ V++SSSKWFISKNAI SGLGLLGLKQ+G DSVSEGES+PKARRKRIVR+KVTAGSS
Sbjct: 481 SEDVNRSSSKWFISKNAITSGLGLLGLKQTGADSVSEGESIPKARRKRIVRKKVTAGSS 539

[Close]

BLAST of CsGy6G021520 vs. NCBI nr
Match: XP_023529366.1 (protein RETICULATA-RELATED 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 682.6 bits (1760), Expect = 1.0e-192
Identity = 403/539 (74.77%), Postives = 429/539 (79.59%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAV-----LVVKAFTASPPSSSS 60
           MSHAVFQTAQIMPI+TQL T  LW+P  VKLG S R R V                    
Sbjct: 1   MSHAVFQTAQIMPIHTQLPTTKLWMPLPVKLGSSQRTRTVXXXXXXXXXXXXXXXXXXXX 60

Query: 61  SGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLS 120
                                               GPVMKGKYGA GAVTLEKSKLD+S
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPVMKGKYGALGAVTLEKSKLDMS 120

Query: 121 QKQSKSSPELAIGGXXXDIGKKINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRK 180
           QKQ++SSPE AIGG XX IGKKI XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRR+
Sbjct: 121 QKQTRSSPETAIGGGXXXIGKKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRQ 180

Query: 181 FLEE-------------------------------GLVSSAQMVRFLAVNARPTTTRFIS 240
           FLEE                               GLVSSAQMV+FLA+NARPTTTRFIS
Sbjct: 181 FLEELFDRKFVDAVLNEWQKTIMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFIS 240

Query: 241 RSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVL 300
           R+LPQGISR+FIGRMLADP+FLY+LLLEQAATIGC AWWEIKNRKDRIKQEWDLALINVL
Sbjct: 241 RTLPQGISRSFIGRMLADPAFLYRLLLEQAATIGCTAWWEIKNRKDRIKQEWDLALINVL 300

Query: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYK 360
           TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNN+FEKSYPMREFDLQKRIHSFFYK
Sbjct: 301 TVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNLFEKSYPMREFDLQKRIHSFFYK 360

Query: 361 AAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420
           AAELCMVGITAGAAQG LSNFL+ KK++RLSVSVPTVSTNALGYGAFLGLYANLRYQLLC
Sbjct: 361 AAELCMVGITAGAAQGALSNFLAKKKKDRLSVSVPTVSTNALGYGAFLGLYANLRYQLLC 420

Query: 421 GFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRP 480
           GFDRAMINHFDVIGVALF SSA+RVLNVQLGERSRLAWLG+EADPLVQS +LL+KVYNR 
Sbjct: 421 GFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDLLQKVYNRR 480

Query: 481 SQGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 504
           S+ V++SSSKWFISKNAI SGLGLLGLKQ+G DSVSEGES+PKARRKRIVR+KVTAGSS
Sbjct: 481 SEDVNRSSSKWFISKNAITSGLGLLGLKQTGADSVSEGESIPKARRKRIVRKKVTAGSS 539

[Close]

BLAST of CsGy6G021520 vs. TAIR10
Match: AT5G24690.1 (Protein of unknown function (DUF3411))

HSP 1 Score: 515.4 bits (1326), Expect = 4.0e-146
Identity = 311/466 (66.74%), Postives = 363/466 (77.90%), Query Frame = 0


Query: 53  SSSSGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFG------PVMKGKYGAFGAVT 112
           +SSS     DS+S LERC +    P+GV+   + SS SF       PVMKGK+G+ GAVT
Sbjct: 42  ASSSSFLVDDSVSGLERCLQL---PSGVELGTS-SSGSFSASTQMCPVMKGKFGSVGAVT 101

Query: 113 LEKSKLDLSQKQSKSSPELAIGGXXXDIGKKINXXXXXXXXXXXXXXXXXXXXXXXXXXX 172
           LEK KLD++QK S++SPE+A G XXX       XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 102 LEKGKLDMTQKISETSPEIATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 161

Query: 173 XXXLFRRRKFLEE-------------------------------GLVSSAQMVRFLAVNA 232
           XXXLFRRR FL E                               GLVSSAQMV+FLA+NA
Sbjct: 162 XXXLFRRRMFLAEIFDRKFVDAVLNEWQKTMMDLPAGLRQAYEMGLVSSAQMVKFLAINA 221

Query: 233 RPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQE 292
           RPTTTR ISR+LPQG+SRAF+GRMLADP+FLYKLLLEQAAT+GC+ WWE+KNRK+R+K+E
Sbjct: 222 RPTTTRMISRALPQGLSRAFVGRMLADPAFLYKLLLEQAATVGCSVWWEVKNRKNRLKEE 281

Query: 293 WDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQ 352
           WDLALINVLTV+ACNA  VW LAPCRSYGNTFRFDLQNTLQKLPNN+FE SYP+REFDLQ
Sbjct: 282 WDLALINVLTVSACNAAAVWLLAPCRSYGNTFRFDLQNTLQKLPNNLFEMSYPLREFDLQ 341

Query: 353 KRIHSFFYKAAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLY 412
           KR HS FYKAAEL ++G+ AG  QG LSN L+ KK+ R+SV+VP++STNALGYGAFLG+Y
Sbjct: 342 KRFHSLFYKAAELSILGLAAGTLQGSLSNVLAGKKKNRVSVTVPSISTNALGYGAFLGIY 401

Query: 413 ANLRYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRE 472
           ANLRYQLLCGF+R + +HFDVIGVALF  +A+R++NVQLGE+SR  WLG+EADPL QS +
Sbjct: 402 ANLRYQLLCGFERGVSSHFDVIGVALFFGTALRIMNVQLGEKSRQVWLGVEADPLAQSDD 461

Query: 473 LLEKVYNRPS-QGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVS 481
           LL K YNRPS + V++ SSKWFISKNAI+S  GLLG KQ   DSVS
Sbjct: 462 LLAKAYNRPSEEAVAKPSSKWFISKNAIVS--GLLGKKQE--DSVS 499

[Close]

BLAST of CsGy6G021520 vs. TAIR10
Match: AT5G22790.1 (reticulata-related 1)

HSP 1 Score: 92.0 bits (227), Expect = 1.1e-18
Identity = 61/183 (33.33%), Postives = 98/183 (53.55%), Query Frame = 0


Query: 218 RMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSL 277
           RMLADPSFL+K+  E A    CA + E++ R +    E++L   ++L     +  +V  L
Sbjct: 209 RMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLL 268

Query: 278 APCRSYG-----NTFRF-DLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCMV 337
           AP    G     +T  F DL+     LP+++FE   P  +F + +RI +FFYK      V
Sbjct: 269 APYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSV 328

Query: 338 GITAG-AAQGVLSNFLSSKKQERLS---VSVPTVSTNALGYGAFLGLYANLRYQLLCGFD 391
           G   G   QG+ +  +++K+  + S   V +P +  +A  +G FLGL +N RYQ++ G +
Sbjct: 329 GFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLE 388

[Close]

BLAST of CsGy6G021520 vs. TAIR10
Match: AT2G37860.3 (Protein of unknown function (DUF3411))

HSP 1 Score: 84.0 bits (206), Expect = 3.0e-16
Identity = 55/182 (30.22%), Postives = 92/182 (50.55%), Query Frame = 0


Query: 218 RMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSL 277
           RMLADPSFL+K+  E      CA   E++ R      E++L + ++L  T  N  +V  L
Sbjct: 209 RMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGML 268

Query: 278 APCRSYGNT-----FRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCMVG 337
           AP   +G       F   +      LP+++FE   P   F  Q+R+ ++FYK      VG
Sbjct: 269 APYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVG 328

Query: 338 ITAG-AAQGVLSNFLSSKK---QERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDR 391
              G   QG+ +  +++K+   +   ++ VP +  +A  +G FL + +N RYQ++ G +R
Sbjct: 329 FGCGIVGQGIANLIMTAKRNINKSEENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLER 388

[Close]

BLAST of CsGy6G021520 vs. TAIR10
Match: AT3G56140.1 (Protein of unknown function (DUF399 and DUF3411))

HSP 1 Score: 80.9 bits (198), Expect = 2.5e-15
Identity = 66/224 (29.46%), Postives = 100/224 (44.64%), Query Frame = 0


Query: 177 LEEGLVSSAQMVRFLAVNARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQAAT 236
           L+ GLVS   +     +   P  +    R       + F  R+LADP FL +L +E+A +
Sbjct: 445 LDLGLVSPEVLQNLFDLEQYPLISELTQR------FQGFRERLLADPKFLNRLAIEEAIS 504

Query: 237 IGCAAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSY--------GNTFR 296
           I      + + RK+   +E D  + + +  +  +   VW  AP  S+        G    
Sbjct: 505 ITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADETTGPDSI 564

Query: 297 FDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGVLSNFLSS 356
             L+  L  +P+N F+KS   RE++L  RI S      +L  VG+ +  A    SN L+ 
Sbjct: 565 DALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGGLKLAGVGVVSSFAAVGASNALNI 624

Query: 357 K----KQERLSVSVPTVS---TNALGYGAFLGLYANLRYQLLCG 386
                K E +    P  S     A+ YG FLG  ANLRYQ++ G
Sbjct: 625 ARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANLRYQIIAG 662

[Close]

BLAST of CsGy6G021520 vs. TAIR10
Match: AT2G40400.1 (Protein of unknown function (DUF399 and DUF3411))

HSP 1 Score: 79.7 bits (195), Expect = 5.6e-15
Identity = 79/313 (25.24%), Postives = 141/313 (45.05%), Query Frame = 0


Query: 174 RKFLEEGLVSSAQMVRFLAVNARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQ 233
           +K L+ GLVS   +  F  +   P  +    R       + F  R+LADP FL +L +E+
Sbjct: 433 QKGLDLGLVSPEILQNFFDLEQYPLISELTQR------FQGFRERLLADPKFLNRLAIEE 492

Query: 234 AATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSY--------GN 293
           A +I      + + RK+   +E D  + + +  +  +   VW  AP  S+        G 
Sbjct: 493 AISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWLPAPTLSFISYADETIGP 552

Query: 294 TFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAG-AAQGVLSN 353
                L+  L  +P+N F+KS   +E+ L  RI S      +L  VG+ +  AA G  + 
Sbjct: 553 NSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKLAGVGVVSSFAAVGSSNA 612

Query: 354 FLSSKKQERLSVSV-------PTVSTNALGYGAFLGLYANLRYQLLCGFDRAMINHFDVI 413
             + +K  +  + V       P + T AL YG +LG  +N+RYQ++ G     I+  D +
Sbjct: 613 LYAIRKFIKPELGVGEQAKRSPMLKT-ALVYGGYLGTSSNIRYQIIAGLIEHRIS--DEL 672

Query: 414 G----VALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVSQSSS 467
                +   +S  +RV N   G +    W+ +     +Q+++ +    N+  +  SQS+ 
Sbjct: 673 SSQPLLVNMISFVVRVANSYFGTQQ---WIDLARSTGLQTQKSV-TTSNQIPEVASQSTV 732

[Close]

BLAST of CsGy6G021520 vs. Swiss-Prot
Match: sp|Q9FGP9|RER1_ARATH (Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER1 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.0e-17
Identity = 61/183 (33.33%), Postives = 98/183 (53.55%), Query Frame = 0


Query: 218 RMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSL 277
           RMLADPSFL+K+  E A    CA + E++ R +    E++L   ++L     +  +V  L
Sbjct: 209 RMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLL 268

Query: 278 APCRSYG-----NTFRF-DLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCMV 337
           AP    G     +T  F DL+     LP+++FE   P  +F + +RI +FFYK      V
Sbjct: 269 APYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSV 328

Query: 338 GITAG-AAQGVLSNFLSSKKQERLS---VSVPTVSTNALGYGAFLGLYANLRYQLLCGFD 391
           G   G   QG+ +  +++K+  + S   V +P +  +A  +G FLGL +N RYQ++ G +
Sbjct: 329 GFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLE 388

[Close]

BLAST of CsGy6G021520 vs. Swiss-Prot
Match: sp|B9DFK5|RETIC_ARATH (Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 5.4e-15
Identity = 55/182 (30.22%), Postives = 92/182 (50.55%), Query Frame = 0


Query: 218 RMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSL 277
           RMLADPSFL+K+  E      CA   E++ R      E++L + ++L  T  N  +V  L
Sbjct: 209 RMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGML 268

Query: 278 APCRSYGNT-----FRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCMVG 337
           AP   +G       F   +      LP+++FE   P   F  Q+R+ ++FYK      VG
Sbjct: 269 APYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVG 328

Query: 338 ITAG-AAQGVLSNFLSSKK---QERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDR 391
              G   QG+ +  +++K+   +   ++ VP +  +A  +G FL + +N RYQ++ G +R
Sbjct: 329 FGCGIVGQGIANLIMTAKRNINKSEENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLER 388

[Close]

BLAST of CsGy6G021520 vs. Swiss-Prot
Match: sp|Q8RWG3|RER6_ARATH (Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER6 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.5e-14
Identity = 66/224 (29.46%), Postives = 100/224 (44.64%), Query Frame = 0


Query: 177 LEEGLVSSAQMVRFLAVNARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQAAT 236
           L+ GLVS   +     +   P  +    R       + F  R+LADP FL +L +E+A +
Sbjct: 445 LDLGLVSPEVLQNLFDLEQYPLISELTQR------FQGFRERLLADPKFLNRLAIEEAIS 504

Query: 237 IGCAAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSY--------GNTFR 296
           I      + + RK+   +E D  + + +  +  +   VW  AP  S+        G    
Sbjct: 505 ITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADETTGPDSI 564

Query: 297 FDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGVLSNFLSS 356
             L+  L  +P+N F+KS   RE++L  RI S      +L  VG+ +  A    SN L+ 
Sbjct: 565 DALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGGLKLAGVGVVSSFAAVGASNALNI 624

Query: 357 K----KQERLSVSVPTVS---TNALGYGAFLGLYANLRYQLLCG 386
                K E +    P  S     A+ YG FLG  ANLRYQ++ G
Sbjct: 625 ARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANLRYQIIAG 662

[Close]

BLAST of CsGy6G021520 vs. Swiss-Prot
Match: sp|Q9SIY5|RER5_ARATH (Protein RETICULATA-RELATED 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER5 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.0e-13
Identity = 79/313 (25.24%), Postives = 141/313 (45.05%), Query Frame = 0


Query: 174 RKFLEEGLVSSAQMVRFLAVNARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQ 233
           +K L+ GLVS   +  F  +   P  +    R       + F  R+LADP FL +L +E+
Sbjct: 433 QKGLDLGLVSPEILQNFFDLEQYPLISELTQR------FQGFRERLLADPKFLNRLAIEE 492

Query: 234 AATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSY--------GN 293
           A +I      + + RK+   +E D  + + +  +  +   VW  AP  S+        G 
Sbjct: 493 AISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWLPAPTLSFISYADETIGP 552

Query: 294 TFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAG-AAQGVLSN 353
                L+  L  +P+N F+KS   +E+ L  RI S      +L  VG+ +  AA G  + 
Sbjct: 553 NSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKLAGVGVVSSFAAVGSSNA 612

Query: 354 FLSSKKQERLSVSV-------PTVSTNALGYGAFLGLYANLRYQLLCGFDRAMINHFDVI 413
             + +K  +  + V       P + T AL YG +LG  +N+RYQ++ G     I+  D +
Sbjct: 613 LYAIRKFIKPELGVGEQAKRSPMLKT-ALVYGGYLGTSSNIRYQIIAGLIEHRIS--DEL 672

Query: 414 G----VALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVSQSSS 467
                +   +S  +RV N   G +    W+ +     +Q+++ +    N+  +  SQS+ 
Sbjct: 673 SSQPLLVNMISFVVRVANSYFGTQQ---WIDLARSTGLQTQKSV-TTSNQIPEVASQSTV 732

[Close]

BLAST of CsGy6G021520 vs. TrEMBL
Match: tr|A0A0A0KDZ4|A0A0A0KDZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411290 PE=4 SV=1)

HSP 1 Score: 883.2 bits (2281), Expect = 2.7e-253
Identity = 501/534 (93.82%), Postives = 501/534 (93.82%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY 60
           MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVSY 60

Query: 61  GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK 120
           GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK
Sbjct: 61  GDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQSK 120

Query: 121 SSPELAIGGXXXDIGKKINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRKFLEE- 180
           SSPELAIGG XXDIGKKIN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRKFLEE 
Sbjct: 121 SSPELAIGGGXXDIGKKINHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRKFLEEL 180

Query: 181 ------------------------------GLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240
                                         GLVSSAQMVRFLAVNARPTTTRFISRSLPQ
Sbjct: 181 FDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRSLPQ 240

Query: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC 300
           GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC
Sbjct: 241 GISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTAC 300

Query: 301 NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC 360
           NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC
Sbjct: 301 NAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELC 360

Query: 361 MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA 420
           MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA
Sbjct: 361 MVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDRA 420

Query: 421 MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS 480
           MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS
Sbjct: 421 MINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGVS 480

Query: 481 QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 504
           QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS
Sbjct: 481 QSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 534

[Close]

BLAST of CsGy6G021520 vs. TrEMBL
Match: tr|A0A1S3BMX1|A0A1S3BMX1_CUCME (protein RETICULATA-RELATED 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491309 PE=4 SV=1)

HSP 1 Score: 802.4 bits (2071), Expect = 6.0e-229
Identity = 462/537 (86.03%), Postives = 477/537 (88.83%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPP---SSSSSG 60
           MSHAVFQTAQIMPINTQLTTN LWLP+VVKLGPSYRNRAVLVVKAFT S P        G
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNKLWLPSVVKLGPSYRNRAVLVVKAFTTSSPXXXXXXXXG 60

Query: 61  VSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQK 120
           V YGDSI+FLERCFET   PAG DP LA+SSSSFGPVMKG++GA G+VTLEKSKLDLSQK
Sbjct: 61  VPYGDSIAFLERCFETPSAPAGSDPFLAISSSSFGPVMKGQFGALGSVTLEKSKLDLSQK 120

Query: 121 QSKSSPELAIGGXXXDIGKKINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRKFL 180
           QSKSSPE AIG XXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRKFL
Sbjct: 121 QSKSSPETAIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRKFL 180

Query: 181 EE-------------------------------GLVSSAQMVRFLAVNARPTTTRFISRS 240
           EE                               GLVSSAQMVRFLAVNARPTTTRFISR+
Sbjct: 181 EELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPTTTRFISRA 240

Query: 241 LPQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTV 300
           LPQGISRAFIGRMLADP+FLY+LLLEQAATIGC+AWWEIKNRKDRIKQEWDLALINVLTV
Sbjct: 241 LPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTV 300

Query: 301 TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA 360
           TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA
Sbjct: 301 TACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAA 360

Query: 361 ELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF 420
           ELC+VGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF
Sbjct: 361 ELCLVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGF 420

Query: 421 DRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQ 480
           DRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELL+KVYNRPS+
Sbjct: 421 DRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLQKVYNRPSE 480

Query: 481 GVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIVRRKVTAGSS 504
            ++QSSSKWFISKNAIISGLGLLGLKQSG DSVSEGESVPKARRKRIVRRKVTAGSS
Sbjct: 481 DINQSSSKWFISKNAIISGLGLLGLKQSGADSVSEGESVPKARRKRIVRRKVTAGSS 537

[Close]

BLAST of CsGy6G021520 vs. TrEMBL
Match: tr|A0A2I4GDX0|A0A2I4GDX0_9ROSI (protein RETICULATA-RELATED 1, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC109007038 PE=4 SV=1)

HSP 1 Score: 640.6 bits (1651), Expect = 3.0e-180
Identity = 379/533 (71.11%), Postives = 426/533 (79.92%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNL--WLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGV 60
           MSHAVFQTAQIMPI T  +   +   LPA   +      R  LV+KA      +SSSS V
Sbjct: 1   MSHAVFQTAQIMPIKTLSSKPKVSPLLPAAHPVAGKMARRG-LVIKA-----SASSSSPV 60

Query: 61  SYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQ 120
             GDS+ FLERCF    PP       A S++   PVMKG+YG+ GAVTLEK KLD+SQKQ
Sbjct: 61  VEGDSVIFLERCFMA--PP-------AASAAIISPVMKGEYGSLGAVTLEKGKLDMSQKQ 120

Query: 121 SKSSPELAIGGXXXDIGKKINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRKFLE 180
           SKSSPE AIGG   DIGKKIN  XXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRKFLE
Sbjct: 121 SKSSPETAIGGGGGDIGKKINHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRKFLE 180

Query: 181 E-------------------------------GLVSSAQMVRFLAVNARPTTTRFISRSL 240
           E                               GLVSSAQMV+FLA+NARPTTTRFISR+L
Sbjct: 181 ELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRAL 240

Query: 241 PQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVT 300
           P+G+SRAFIGRMLADP+FLYKLLLEQAATI C+ WWE+KNRKDRIKQEWDLAL+NVLT++
Sbjct: 241 PEGMSRAFIGRMLADPAFLYKLLLEQAATISCSVWWELKNRKDRIKQEWDLALLNVLTIS 300

Query: 301 ACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAE 360
           ACNAIVVWSLAPCRSYGNTF FDLQNTLQKLPNNIFE+SY  REFD+QKRIHSFFYKAAE
Sbjct: 301 ACNAIVVWSLAPCRSYGNTFHFDLQNTLQKLPNNIFERSYAFREFDMQKRIHSFFYKAAE 360

Query: 361 LCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFD 420
           LCMVG++AGA QG LSNFL+SKK+ RLSV++P++STNALGYGAFLGLYANLRYQ+LCGFD
Sbjct: 361 LCMVGLSAGAVQGALSNFLASKKEGRLSVTIPSMSTNALGYGAFLGLYANLRYQMLCGFD 420

Query: 421 RAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQG 480
           RA+ +HFDVIGVALF S+A+R+LN+QLGERSRLAWLG+EADPLV S  LL KVYNRPS+ 
Sbjct: 421 RAISSHFDVIGVALFFSTALRILNIQLGERSRLAWLGVEADPLVDSDTLL-KVYNRPSED 480

Query: 481 VSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGE-SVPKARRKRIVRRKVT 500
             + SSKWFISKNAI+SGLGLLG+KQ   DSV++GE S PKARRKRIVR+KVT
Sbjct: 481 ADRPSSKWFISKNAIVSGLGLLGIKQEKGDSVAKGEPSAPKARRKRIVRKKVT 517

[Close]

BLAST of CsGy6G021520 vs. TrEMBL
Match: tr|M5XLU6|M5XLU6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G567400 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 6.3e-178
Identity = 382/536 (71.27%), Postives = 427/536 (79.66%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTN-NLWLPAVVKLGPSYRNRAVLVVKAFTASPPSSSSSGVS 60
           MSHAVFQTAQIMPINTQL T   L  P  +++      R  L++KA  A+P   S+SG  
Sbjct: 1   MSHAVFQTAQIMPINTQLPTKPKLMGPIQLRMS----ERRGLLLKANCAAP---STSGFV 60

Query: 61  YGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDLSQKQS 120
            GDS++ LERCF        V PS+A     FGPVMKG+YGA GAVTLEK KLD+SQKQS
Sbjct: 61  DGDSMALLERCF--------VGPSVA---GGFGPVMKGQYGALGAVTLEKGKLDMSQKQS 120

Query: 121 KSSPELAIGGXXXDIGKKINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRKFLEE 180
           KSSPE AIG XXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRR FLEE
Sbjct: 121 KSSPETAIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFRRRMFLEE 180

Query: 181 -------------------------------GLVSSAQMVRFLAVNARPTTTRFISRSLP 240
                                          GL+SSAQMV+FLA NARPTTTRFISR+LP
Sbjct: 181 LFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLISSAQMVKFLATNARPTTTRFISRALP 240

Query: 241 QGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDLALINVLTVTA 300
            GISRAFIGRMLADP+FLY+ LLEQAATIG + WWE+KNRK RIKQEWDLALINVLTVTA
Sbjct: 241 DGISRAFIGRMLADPAFLYRFLLEQAATIGSSVWWELKNRKGRIKQEWDLALINVLTVTA 300

Query: 301 CNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAEL 360
           CNAIVVWSLAPCRSYGNTF+FDLQNTLQKLPNNIFEKSYP+REFDLQKR+HSFFYKAAEL
Sbjct: 301 CNAIVVWSLAPCRSYGNTFKFDLQNTLQKLPNNIFEKSYPLREFDLQKRVHSFFYKAAEL 360

Query: 361 CMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANLRYQLLCGFDR 420
           CMVG+TAGA QG LSNFL+ KK+ RLSV++P+V  NALGYGAFLGLYANLRYQLLCGFDR
Sbjct: 361 CMVGLTAGAVQGSLSNFLAHKKEGRLSVTIPSVKANALGYGAFLGLYANLRYQLLCGFDR 420

Query: 421 AMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLEKVYNRPSQGV 480
           A++NHFDVIGVALFLS+ +R+LNVQ+GERSRLAWLG+EADPLV S +LL KVY+RPS  +
Sbjct: 421 AVMNHFDVIGVALFLSTTLRLLNVQVGERSRLAWLGVEADPLVDSDDLL-KVYSRPSDNL 480

Query: 481 SQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGE-SVPKARRKRIVRRKVTAGSS 504
            + SSKWFISKNAI+SGLGLLG+KQ   DSV++GE S PK RRKRIVR+KVTA S+
Sbjct: 481 ERPSSKWFISKNAIVSGLGLLGIKQGNADSVADGESSTPKTRRKRIVRKKVTASSA 517

[Close]

BLAST of CsGy6G021520 vs. TrEMBL
Match: tr|A0A067L459|A0A067L459_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05041 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 5.5e-174
Identity = 369/549 (67.21%), Postives = 416/549 (75.77%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLTTNNL--WLPAVVKLGPSYRNRAV----------LVVKAFTA 60
           MSH VF TAQI    T   T  L   LP + +L P  +  A+          L++K    
Sbjct: 1   MSHLVFHTAQIPTATTAAKTLPLKPSLPPIPQLCPRQQLPAIQPVTCKLRRNLIIKC--- 60

Query: 61  SPPSSSSSGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSS---FGPVMKGKYGAFGAV 120
               SS S +   D++S LERCF     P      L  +SSS   FGPVMKGK+GAFGAV
Sbjct: 61  ----SSPSIIDGADAVSALERCF---LAPDAAPVDLGSASSSRGEFGPVMKGKFGAFGAV 120

Query: 121 TLEKSKLDLSQKQSKSSPELAIGGXXXDIGKKINXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           TLEK KLDL+QK+SK SPE+A+GG   DIGKKIN   XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 TLEKGKLDLTQKESKVSPEVALGGGGGDIGKKINHGGXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXLFRRRKFLEE-------------------------------GLVSSAQMVRFLAVN 240
           XXXXLFRRRKFLEE                               GLVSSAQMV+FLA+N
Sbjct: 181 XXXXLFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVKFLAIN 240

Query: 241 ARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQ 300
           ARPTTTRFISR+LP+ ISRAFIGRMLADP+FLY+LLLEQAATIGC+ WWE+KNRKDRIK 
Sbjct: 241 ARPTTTRFISRTLPEAISRAFIGRMLADPAFLYRLLLEQAATIGCSVWWELKNRKDRIKH 300

Query: 301 EWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDL 360
           EWDLAL+NVLT T CNAIVVW+LAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYP+REFDL
Sbjct: 301 EWDLALVNVLTATVCNAIVVWTLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPLREFDL 360

Query: 361 QKRIHSFFYKAAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGL 420
           QKR+HSFFYKAAELC+VG++AGA QG LSN L+SKK++RLSV+VP VS  A GYGAFLGL
Sbjct: 361 QKRVHSFFYKAAELCVVGLSAGAIQGQLSNVLASKKKDRLSVTVPPVSNYARGYGAFLGL 420

Query: 421 YANLRYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSR 480
           YANLRYQLLCGFDRAM++HFDVIGVALF S+AMR+LNVQ+GE SRLAW+G EADPL QS 
Sbjct: 421 YANLRYQLLCGFDRAMVSHFDVIGVALFFSTAMRILNVQVGETSRLAWIGAEADPLAQSD 480

Query: 481 ELLEKVYNRPSQGVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPKARRKRIV 504
            LL K YNRP + V+ SSSKWFISK   +SGLGLLG+KQ  VDSV  G S PK RRKR+V
Sbjct: 481 TLL-KAYNRPVEDVATSSSKWFISKKTFVSGLGLLGIKQGSVDSVDGGASAPKTRRKRVV 538

The following BLAST results are available for this feature:

BLAST of CsGy6G021520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140107.1	4.0e-253	93.82	PREDICTED: uncharacterized protein LOC101205574 [Cucumis sativus] >KGN47925.1 hy...	[more]
XP_008449416.1	9.0e-229	86.03	PREDICTED: protein RETICULATA-RELATED 1, chloroplastic [Cucumis melo]	[more]
XP_022155012.1	3.8e-211	80.71	protein RETICULATA-RELATED 1, chloroplastic [Momordica charantia]	[more]
XP_022989621.1	6.1e-193	74.95	protein RETICULATA-RELATED 1, chloroplastic [Cucurbita maxima]	[more]
XP_023529366.1	1.0e-192	74.77	protein RETICULATA-RELATED 1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy6G021520 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24690.1	4.0e-146	66.74	Protein of unknown function (DUF3411)	[more]
AT5G22790.1	1.1e-18	33.33	reticulata-related 1	[more]
AT2G37860.3	3.0e-16	30.22	Protein of unknown function (DUF3411)	[more]
AT3G56140.1	2.5e-15	29.46	Protein of unknown function (DUF399 and DUF3411)	[more]
AT2G40400.1	5.6e-15	25.24	Protein of unknown function (DUF399 and DUF3411)	[more]

BLAST of CsGy6G021520 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FGP9\|RER1_ARATH	2.0e-17	33.33	Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
sp\|B9DFK5\|RETIC_ARATH	5.4e-15	30.22	Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=...	[more]
sp\|Q8RWG3\|RER6_ARATH	4.5e-14	29.46	Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
sp\|Q9SIY5\|RER5_ARATH	1.0e-13	25.24	Protein RETICULATA-RELATED 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]

BLAST of CsGy6G021520 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KDZ4\|A0A0A0KDZ4_CUCSA	2.7e-253	93.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411290 PE=4 SV=1	[more]
tr\|A0A1S3BMX1\|A0A1S3BMX1_CUCME	6.0e-229	86.03	protein RETICULATA-RELATED 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491...	[more]
tr\|A0A2I4GDX0\|A0A2I4GDX0_9ROSI	3.0e-180	71.11	protein RETICULATA-RELATED 1, chloroplastic-like OS=Juglans regia OX=51240 GN=LO...	[more]
tr\|M5XLU6\|M5XLU6_PRUPE	6.3e-178	71.27	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G567400 PE=4 SV=1	[more]
tr\|A0A067L459\|A0A067L459_JATCU	5.5e-174	67.21	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05041 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021825	RETICULATA-related

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G021520.1	CsGy6G021520.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021825	Protein RETICULATA-related	PFAM	PF11891	RETICULATA-like	coord: 217..385 e-value: 2.4E-60 score: 203.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..165
None	No IPR available	PANTHER	PTHR31038	FAMILY NOT NAMED	coord: 1..179
None	No IPR available	PANTHER	PTHR31038	FAMILY NOT NAMED	coord: 174..502
None	No IPR available	PANTHER	PTHR31038:SF2	SUBFAMILY NOT NAMED	coord: 1..179
None	No IPR available	PANTHER	PTHR31038:SF2	SUBFAMILY NOT NAMED	coord: 174..502

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G021520	Csa6G411290	Cucumber (Chinese Long) v2	cgybcuB281
CsGy6G021520	MELO3C014379	Melon (DHL92) v3.5.1	cgybmeB430
CsGy6G021520	CSPI06G22260	Wild cucumber (PI 183967)	cgybcpiB287
CsGy6G021520	CmaCh11G015960	Cucurbita maxima (Rimu)	cgybcmaB708
CsGy6G021520	CmoCh11G015270	Cucurbita moschata (Rifu)	cgybcmoB694
CsGy6G021520	Lsi03G008660	Bottle gourd (USVL1VR-Ls)	cgyblsiB411
CsGy6G021520	Cp4.1LG04g06740	Cucurbita pepo (Zucchini)	cgybcpeB842
CsGy6G021520	MELO3C014379.2	Melon (DHL92) v3.6.1	cgybmedB425
CsGy6G021520	CsaV3_6G037380	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G021520	Cla97C09G176720	Watermelon (97103) v2	cgybwmbB483
CsGy6G021520	Bhi05G000572	Wax gourd	cgybwgoB535

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G021520	Watermelon (97103) v2	cgybwmbB486
CsGy6G021520	Cucurbita maxima (Rimu)	cgybcmaB785
CsGy6G021520	Cucurbita moschata (Rifu)	cgybcmoB764
CsGy6G021520	Cucurbita pepo (Zucchini)	cgybcpeB752
CsGy6G021520	Watermelon (Charleston Gray)	cgybwcgB388
CsGy6G021520	Silver-seed gourd	carcgybB0642
CsGy6G021520	Silver-seed gourd	carcgybB0730