Lsi03G008140 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTGGGAAAATCCAATTAAATTATGTGCTTTGGTGGTTTTTGCAGCAGTGATTTATGGGTCAAGAGCTGAGGGTTTGGGAAATGGAAGTATGCCCACAAATGTCACTTTCTTGACATTCTCAGAGCTGCCACAGGGGAATGCAGGGGAGATCAGAAGAAACAATTCAGACAATACTACAACGGTTGAGGTCAGCAAGCGGAATGGGGGTGGCGGTGGCGGTGGCTATGGATGGGGATGGGGTGGAGGCGGCGGTGGTGGTGGAGGAAGTGGTGGTGGTGGTGGTGGATGGGGATGGGGAGGAGGTGGAGGTGGGTGGTGGAAATGGGGTTGCGGAGGACAGCGAAAATCCGAGAGAGTTGGACGACGTGACGGACGGAGAAAAAATGTTAACCGAAAGAAAATGTACGACGAGAAAGATTATAGAATGGGAGAATTTGCACAATGTATGGTGAAAGGAAGATGCAAAGGAATGAGATTAGACTGCCCACTTCATTGCGACGGACCTTGCTTTTATGATTGTCGATACATGTGTAAAGCTCACTGTCGACGCTCCTAA ATGGGGTGGGAAAATCCAATTAAATTATGTGCTTTGGTGGTTTTTGCAGCAGTGATTTATGGGTCAAGAGCTGAGGGTTTGGGAAATGGAAGTATGCCCACAAATGTCACTTTCTTGACATTCTCAGAGCTGCCACAGGGGAATGCAGGGGAGATCAGAAGAAACAATTCAGACAATACTACAACGGTTGAGGTCAGCAAGCGGAATGGGGGTGGCGGTGGCGGTGGCTATGGATGGGGATGGGGTGGAGGCGGCGGTGGTGGTGGAGGAAGTGGTGGTGGTGGTGGTGGATGGGGATGGGGAGGAGGTGGAGGTGGGTGGTGGAAATGGGGTTGCGGAGGACAGCGAAAATCCGAGAGAGTTGGACGACGTGACGGACGGAGAAAAAATGTTAACCGAAAGAAAATGTACGACGAGAAAGATTATAGAATGGGAGAATTTGCACAATGTATGGTGAAAGGAAGATGCAAAGGAATGAGATTAGACTGCCCACTTCATTGCGACGGACCTTGCTTTTATGATTGTCGATACATGTGTAAAGCTCACTGTCGACGCTCCTAA ATGGGGTGGGAAAATCCAATTAAATTATGTGCTTTGGTGGTTTTTGCAGCAGTGATTTATGGGTCAAGAGCTGAGGGTTTGGGAAATGGAAGTATGCCCACAAATGTCACTTTCTTGACATTCTCAGAGCTGCCACAGGGGAATGCAGGGGAGATCAGAAGAAACAATTCAGACAATACTACAACGGTTGAGGTCAGCAAGCGGAATGGGGGTGGCGGTGGCGGTGGCTATGGATGGGGATGGGGTGGAGGCGGCGGTGGTGGTGGAGGAAGTGGTGGTGGTGGTGGTGGATGGGGATGGGGAGGAGGTGGAGGTGGGTGGTGGAAATGGGGTTGCGGAGGACAGCGAAAATCCGAGAGAGTTGGACGACGTGACGGACGGAGAAAAAATGTTAACCGAAAGAAAATGTACGACGAGAAAGATTATAGAATGGGAGAATTTGCACAATGTATGGTGAAAGGAAGATGCAAAGGAATGAGATTAGACTGCCCACTTCATTGCGACGGACCTTGCTTTTATGATTGTCGATACATGTGTAAAGCTCACTGTCGACGCTCCTAA MGWENPIKLCALVVFAAVIYGSRAEGLGNGSMPTNVTFLTFSELPQGNAGEIRRNNSDNTTTVEVSKRNGGGGGGGYGWGWGGGGGGGGGSGGGGGGWGWGGGGGGWWKWGCGGQRKSERVGRRDGRRKNVNRKKMYDEKDYRMGEFAQCMVKGRCKGMRLDCPLHCDGPCFYDCRYMCKAHCRRS
BLAST of Lsi03G008140 vs. TrEMBL
Match: A0A0A0K766_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G056450 PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 2.9e-74 Identity = 161/191 (84.29%), Postives = 168/191 (87.96%), Query Frame = 1
BLAST of Lsi03G008140 vs. TrEMBL
Match: A0A067KQT9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04511 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 2.6e-30 Identity = 96/185 (51.89%), Postives = 117/185 (63.24%), Query Frame = 1
BLAST of Lsi03G008140 vs. TrEMBL
Match: A0A0D2QJC8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G196900 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 3.3e-30 Identity = 77/120 (64.17%), Postives = 93/120 (77.50%), Query Frame = 1
BLAST of Lsi03G008140 vs. TrEMBL
Match: F6GZQ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g13540 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 9.7e-30 Identity = 82/117 (70.09%), Postives = 93/117 (79.49%), Query Frame = 1
BLAST of Lsi03G008140 vs. TrEMBL
Match: A0A067H1H4_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g038433mg PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.3e-29 Identity = 85/117 (72.65%), Postives = 95/117 (81.20%), Query Frame = 1
BLAST of Lsi03G008140 vs. TAIR10
Match: AT1G75550.1 (AT1G75550.1 glycine-rich protein) HSP 1 Score: 98.6 bits (244), Expect = 4.3e-21 Identity = 76/144 (52.78%), Postives = 90/144 (62.50%), Query Frame = 1
BLAST of Lsi03G008140 vs. NCBI nr
Match: gi|659110503|ref|XP_008455258.1| (PREDICTED: keratin, type II cytoskeletal 1 [Cucumis melo]) HSP 1 Score: 288.9 bits (738), Expect = 6.4e-75 Identity = 164/195 (84.10%), Postives = 172/195 (88.21%), Query Frame = 1
BLAST of Lsi03G008140 vs. NCBI nr
Match: gi|778730147|ref|XP_011659711.1| (PREDICTED: keratin, type II cytoskeletal 2 epidermal [Cucumis sativus]) HSP 1 Score: 286.2 bits (731), Expect = 4.1e-74 Identity = 161/191 (84.29%), Postives = 168/191 (87.96%), Query Frame = 1
BLAST of Lsi03G008140 vs. NCBI nr
Match: gi|694317112|ref|XP_009336768.1| (PREDICTED: putative glycine-rich cell wall structural protein 1 [Pyrus x bretschneideri]) HSP 1 Score: 141.7 bits (356), Expect = 1.3e-30 Identity = 90/127 (70.87%), Postives = 99/127 (77.95%), Query Frame = 1
BLAST of Lsi03G008140 vs. NCBI nr
Match: gi|1009135066|ref|XP_015884786.1| (PREDICTED: putative glycine-rich cell wall structural protein 1 [Ziziphus jujuba]) HSP 1 Score: 141.4 bits (355), Expect = 1.6e-30 Identity = 93/164 (56.71%), Postives = 113/164 (68.90%), Query Frame = 1
BLAST of Lsi03G008140 vs. NCBI nr
Match: gi|645229318|ref|XP_008221411.1| (PREDICTED: glycine-rich protein 2 [Prunus mume]) HSP 1 Score: 141.0 bits (354), Expect = 2.1e-30 Identity = 91/164 (55.49%), Postives = 108/164 (65.85%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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