Lsi03G008040 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGATTGGATGCTTTAAAGAAATAGCCGCCAGCAGGCAGAGGCCACGATACAGCATAAAGGCAGACCAAAAAGTTTGAATTGACTGACATTCTTCTAATTCACCTTGAAAATAATCAAATCACTTAAAACAAATACCCCACAAAAAACAAAGCCAACAAAGTCAAATCGTCGTTATGAATTTCTCTGGCAACGCATTTTCCCATATTCCACAGCGCACCCCAATACCTGAAAACACAAACTCCCAATCCAATTCCTCCACTTCCTGACCGGAGCTGCTGCAGCAGAGCCAATAATGGGGAATGGCACTTCCAAGCTCGATTCCTCCTCTTCTTCTTCTTCCGATCCTGATGCTGAAGAATCGCGTGTCGCTCGATTCAAGAATCGTGTGCATCTTCGTCGATTTCTTCGTAGGCGCCGTAAAGGCACCAATGGCGGAGGTTTTCGTTCTCATACCAAACTTGGCTCTGCGGATGATTTCGCTGGAATCGCTGTTCTAACTCTTATTCGTGTAATTCTCTGCCTACCTTAACGCTTTGTTGCCTTGATTTGTCTCTCTGTTTGATGTGCTTTGCTATTGTTTGTTTGCAGGCGCGAATGAATTTCAAGGATAAGTGGCTCGCTTGTGTTTCTTTTGGAGAACAGACTTTTCGAACGGGAATCTCTGATCAGTTAAGTGTC AAAAGATTGGATGCTTTAAAGAAATAGCCGCCAGCAGGCAGAGGCCACGATACAGCATAAAGGCAGACCAAAAAGTTTGAATTGACTGACATTCTTCTAATTCACCTTGAAAATAATCAAATCACTTAAAACAAATACCCCACAAAAAACAAAGCCAACAAAGTCAAATCGTCGTTATGAATTTCTCTGGCAACGCATTTTCCCATATTCCACAGCGCACCCCAATACCTGAAAACACAAACTCCCAATCCAATTCCTCCACTTCCTGACCGGAGCTGCTGCAGCAGAGCCAATAATGGGGAATGGCACTTCCAAGCTCGATTCCTCCTCTTCTTCTTCTTCCGATCCTGATGCTGAAGAATCGCGTGTCGCTCGATTCAAGAATCGTGTGCATCTTCGTCGATTTCTTCGTAGGCGCCGTAAAGGCACCAATGGCGGAGGTTTTCGTTCTCATACCAAACTTGGCTCTGCGGATGATTTCGCTGGAATCGCTGTTCTAACTCTTATTCGTGCGCGAATGAATTTCAAGGATAAGTGGCTCGCTTGTGTTTCTTTTGGAGAACAGACTTTTCGAACGGGAATCTCTGATCAGTTAAGTGTC ATGGGGAATGGCACTTCCAAGCTCGATTCCTCCTCTTCTTCTTCTTCCGATCCTGATGCTGAAGAATCGCGTGTCGCTCGATTCAAGAATCGTGTGCATCTTCGTCGATTTCTTCGTAGGCGCCGTAAAGGCACCAATGGCGGAGGTTTTCGTTCTCATACCAAACTTGGCTCTGCGGATGATTTCGCTGGAATCGCTGTTCTAACTCTTATTCGTGCGCGAATGAATTTCAAGGATAAGTGGCTCGCTTGTGTTTCTTTTGGAGAACAGACTTTTCGAACGGGAATCTCTGATCAGTTAAGTGTC MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISDQLSV
BLAST of Lsi03G008040 vs. Swiss-Prot
Match: PSD2_ARATH (Phosphatidylserine decarboxylase proenzyme 2 OS=Arabidopsis thaliana GN=PSD2 PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 9.1e-15 Identity = 47/98 (47.96%), Postives = 61/98 (62.24%), Query Frame = 1
BLAST of Lsi03G008040 vs. Swiss-Prot
Match: PSD3_ARATH (Phosphatidylserine decarboxylase proenzyme 3 OS=Arabidopsis thaliana GN=PSD3 PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 5.9e-14 Identity = 53/101 (52.48%), Postives = 60/101 (59.41%), Query Frame = 1
BLAST of Lsi03G008040 vs. TrEMBL
Match: A0A0A0K2G8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G058530 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 4.8e-39 Identity = 88/100 (88.00%), Postives = 94/100 (94.00%), Query Frame = 1
BLAST of Lsi03G008040 vs. TrEMBL
Match: A0A061E2K3_THECC (Phosphatidylserine decarboxylase proenzyme 2 OS=Theobroma cacao GN=PSD2 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.6e-21 Identity = 62/100 (62.00%), Postives = 74/100 (74.00%), Query Frame = 1
BLAST of Lsi03G008040 vs. TrEMBL
Match: A0A061E1F1_THECC (Phosphatidylserine decarboxylase proenzyme 2 OS=Theobroma cacao GN=PSD2 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.6e-21 Identity = 62/100 (62.00%), Postives = 74/100 (74.00%), Query Frame = 1
BLAST of Lsi03G008040 vs. TrEMBL
Match: A0A0D2PM37_GOSRA (Phosphatidylserine decarboxylase proenzyme 2 OS=Gossypium raimondii GN=PSD2 PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 6.5e-20 Identity = 62/99 (62.63%), Postives = 75/99 (75.76%), Query Frame = 1
BLAST of Lsi03G008040 vs. TrEMBL
Match: A0A0B0MD54_GOSAR (Phosphatidylserine decarboxylase proenzyme 2 OS=Gossypium arboreum GN=PSD2 PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 8.5e-20 Identity = 60/99 (60.61%), Postives = 72/99 (72.73%), Query Frame = 1
BLAST of Lsi03G008040 vs. TAIR10
Match: AT5G57190.1 (AT5G57190.1 phosphatidylserine decarboxylase 2) HSP 1 Score: 80.9 bits (198), Expect = 5.1e-16 Identity = 47/98 (47.96%), Postives = 61/98 (62.24%), Query Frame = 1
BLAST of Lsi03G008040 vs. TAIR10
Match: AT4G25970.1 (AT4G25970.1 phosphatidylserine decarboxylase 3) HSP 1 Score: 78.2 bits (191), Expect = 3.3e-15 Identity = 53/101 (52.48%), Postives = 60/101 (59.41%), Query Frame = 1
BLAST of Lsi03G008040 vs. NCBI nr
Match: gi|659110477|ref|XP_008455245.1| (PREDICTED: phosphatidylserine decarboxylase proenzyme 3-like [Cucumis melo]) HSP 1 Score: 172.9 bits (437), Expect = 2.8e-40 Identity = 90/101 (89.11%), Postives = 96/101 (95.05%), Query Frame = 1
BLAST of Lsi03G008040 vs. NCBI nr
Match: gi|778724254|ref|XP_011658767.1| (PREDICTED: phosphatidylserine decarboxylase proenzyme 2 [Cucumis sativus]) HSP 1 Score: 168.3 bits (425), Expect = 6.9e-39 Identity = 88/100 (88.00%), Postives = 94/100 (94.00%), Query Frame = 1
BLAST of Lsi03G008040 vs. NCBI nr
Match: gi|700188445|gb|KGN43678.1| (hypothetical protein Csa_7G058530 [Cucumis sativus]) HSP 1 Score: 168.3 bits (425), Expect = 6.9e-39 Identity = 88/100 (88.00%), Postives = 94/100 (94.00%), Query Frame = 1
BLAST of Lsi03G008040 vs. NCBI nr
Match: gi|590688749|ref|XP_007043036.1| (Phosphatidylserine decarboxylase 2 isoform 1 [Theobroma cacao]) HSP 1 Score: 109.4 bits (272), Expect = 3.8e-21 Identity = 62/100 (62.00%), Postives = 74/100 (74.00%), Query Frame = 1
BLAST of Lsi03G008040 vs. NCBI nr
Match: gi|590688753|ref|XP_007043037.1| (Phosphatidylserine decarboxylase 2 isoform 2 [Theobroma cacao]) HSP 1 Score: 109.4 bits (272), Expect = 3.8e-21 Identity = 62/100 (62.00%), Postives = 74/100 (74.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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